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Oryza sativa
cluster # 12464 cluster # 12464       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12464#0 length = 837 sequences # 7  
consensus_12464#1 length = 564 sequences # 1  
consensus_12464#2 length = 465 sequences # 1  
consensus_12464#3 length = 411 sequences # 1  

consensusID : consensus_12464#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 837
fasta sequence
                              [GATAATCCCTTTCCTCTCCTCTCCGTGGGGGTGCTGTGTCCACCTTCGGCCGCCGCCATGGACAGGAATGGTGTTAGCCACTAAAAAAAACTAAATAAATAAAAGGGCCTCCGCTGGGAACACACAAAGGCCAAGGCGGAGGTGGGGAGGTGCCTGTAGAGCGA-TTGGATTCGTATATAAAGAA-AAGCATC-GTT-TGCCTTG-CCCAAATCCTGCCGCAGATGCCAAGGTTCATAACAACATAGATCCTGCAAGTC-TTGAGACGCTAGTGCAGGAGAAGAAAGACGAGCTGTTCCGTCTGCTACTTCAGATGGATCTTCACAATGGCTCGTGTGAAAAAAGT-GCCGAGGAGAACAAAGCCATACTGAGGCTGCTTCGGCAATTCCGTG-CTGAGACGCGAGATAATGGTACCTTGTCCGGTGCTGATACGAAAAACTTGGCCAATCGATACGTCCTACCTGTGTCCATTATTTTGAGTGGTATCATCATCGTCGCTCAGGGCCATTTT-ATATCTCACCTCTGAAATGGGGGCCCTGCTCGTTCGAAGAATAAGTTATCTAACGGTGTGGATCCCCATGGTGC-GGAGGCTAAATATCACCATGTTATCTTTTCCTCTTTTTTTTTTTCATATTTTAAGAAAACGATACCGATGTGTTCTCTAGTGCTAATGGTT-AGCGAGTTCGCTTGCTGTCATAACCAATTCTCTTGTTCGTCTATGTTCGAATTGTCAATGTCTTCTTTCTCTGAAACTAGCGAAGTGCATGTGCCTTTGCACAAATCTAAATAAATTGTTAAACACAACATGCTCATCGTTTTTTTGGAGAAAAGGCATAAGCCCAG]

[+] EMBL AK064860             [GATAATCCCTTTCCTCTCCTCTCCGTGGGGGTGCTGTGTCCACCTTCGGCCGCCGCCATGGACAGGAATGGTGTTAGCCACTAAAAAAAACTAAATAAATAAAAGGGCCTCCGCTGGGAACACACAAAGGCCAAGGCGGAGGTGGGGAGGTGCCTGTAGAGCGA TTGGATTCGTATATAAAGAA AAGCATC GTT TGCCTTG CCCAAATCCTGCCGCAGATGCCAAGGTTCATAACAACATAGATCCTGCAAGTC TTGAGACGCTAGTGCAGGAGAAGAAAGACGAGCTGTTCCGTCTGCTACTTCAGATGGATCTTCACAATGGCTCGTGTGAAAAAAGT GCCGAGGAGAACAAAGCCATACTGAGGCTGCTTCGGCAATTCCGTG CTGAGACGCGAGATAATGGTACCTTGTCCGGTGCTGATACGAAAAACTTGGCCAATCGATACGTCCTACCTGTGTCCATTATTTTGAGTGGTATCATCATCGTCGCTCAGGGCCATTTT ATATCTCACCTCTGAAATGGGGGCCCTGCTCGTTCGAAGAATAAGTTATCTAACGGTGTGGATCCCCATGGTGC GGAGGCTAAATATCACCATGTTATCTTTTCCTCTTTTTTTTTTTCATATTTTAAGAAAACGATACCGATGTGTTCTCTAGTGCTAATGGTT AGCGAGTTCGCTTGCTGTCATAACCAATTCTCTTGTTCGTCTATGTTCGAATTGTCAATGTCTTCTTTCTCTGAAACTAGCGAAGTGCATGTGCCTTTG                                                                    ]
[+] EMBL CF281765             [ ATAATCCCTTTCCTCTCCTCTCCGTGGGGGTGCTGTGTCCACCTTCGGCCGCCGCCATGGACAGGAATGGTGTTAGCCACTAAAAAAAACTAAATAAATAAAAGGGCCTCCGCTGGGAACACACAAAGGCCAAGGCGGAGGTGGGGAGGTGCCTGTANAGCGA TTGGATTCGTATATAAAGAA AAGCATC GTT TGCCTTG CCCAAATCCTGCCGCAGATGCCAAGGTTCATAACAACATAGATCCTGCAAGTC TTGAGACGCTAGTGCAGGAGAAGAAAGACGAGCTGTTCCGTCTGCTACTTCAGATGGATCTTCACAATGGCTCGTGTGAAAAAAGT GCCGAGGAGAACAAAGCCATACTGAGGCTGCTTCGGCAATTCCGTG CTGAGACGCGAGATAATGGTACCTTGTCCGGTGCTGATACGAAAAACTTGGCCAATCGATACGTCCTACCTGTGTCCATTATTTTGAGTGGTATCATCATCGACGCTCAGGGCCATTTT ATATCTCACCTCTGAAATGGGGGCCCT                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU225773             [                                                                            GCCGCT  AAAAAACTAAATAAATAAAAGGGCCTCCGCTGGGAACACACAAAGGCCAAGGCGGAGGTGGGGAGGTGCCTGTAGAGCGA TTGGATTCGTATATAAAGAA AAGCATC GTT TGCCTTG CCCAAATCCTGCCGCAGATGCCAAGGTTCATAACAACATAGATCCTGCAAGTC TTGAGACGCTAGTGCAGGAGAAGAAAGACGAGCTGTTCCGTCTGCTACTTCAGATGGATCTTCACAATGGCTCGTGTGAAAAAAGT GCCGAGGAGAACAAAGCCATACTGAGGCTGCTTCGGCAATTCCGTG CTGAGACGCGAGATAATGGTACCTTGTCCGGTGCTGATACGAAAAACTTGGCCAATCGATACGTCCTACCTGTGTCCATTATTTTGAGTGGTATCATCATCGTCGCTCAGGGCCATTTT ATATCTCACCTCTGAAATGGGGGCCCTGCTCGTTCGAAGAATAAGTTATCTAACGGTGTGGATCCCCATGGTGCGGGAGGCTAAATATCACCATGTTATC                                                                                                                                                                                                                                          ]
[+] EMBL BI802717             [                                                                                                                                                             AGAGCGATTTGGATTCGTATAT AAGAATAAGCATCTGTTGTCCTTTGCCCCCAATCCGGCTGCAGATGCCAAGTTTCAT AC ACATAGATCCTGCAAGTCTTTGAGACGCTAGTGCAGGAGAAGAAAGACGAGCTGTTCCATCTGCTACTTCAGATGGATCTTCACAATGGCTCGTGTGAAAAAAGTGGCCGAGGAGAAC AAGCCATACTGAGGCTGCTT TGCAATTCCGTGTCTGAGACGCGAGATAATGGTACCTTGTCCGGTGCAGATACGAAAAACTTGGCCAATCGATACGTCCTACCTGTGTCCATTATTTTGAGTGGTATCATCATCGTCGCTCAGGGCCATTTTGATATCTCACCTCTGAAATGGGGGCCCTGCTCGTTCGAAGAATAAGTTATCTAACGGTGTGGATCCCCATGGTCC GGAGGCTAAATATCACCATGTTATCTTTTCC GATTTTTTTTTTCATATTTTAAG AAACGATACCGATGTGTTCTCTAGTGCTAATGGTTCAGCGAGTTCGCTTGCTGTCAa                                                                                                                                                  ]
[-] EMBL CF281766             [                                                                                                                                                                           TCGTATATAAAGAA AAGCATC GTT TGCCTTG CCCAAATCCTGCCGCAGATGCCAAGGTTCATAACAACATAGATCCTGCAAGTC TTGAGACGCTAGTGCAGGAGAAGAAAGACGAGCTGTTCCGTCTGCTACTTCAGATGGATCTTCACAATGGCTCGTGTGAAAAAAGT GCCGAGGAGAACAAAGCCATACTGAGGCTGCTTCGGCAATTCCGTG CTGAGACGCGAGATAATGGTACCTTGTCCGGTGCTGATACGAAAAACTTGGCCAATCGATACGTCCTACCTGTGTCCATTATTTTGAGTGGTATCATCATCGACGCTCAGGGCCATTTT ATATCTCACCTCTGAAATGGGGGCAAAAATCGTTCGAAGAATAAGTTATCTAACGGTGTGGATCCCCAAAAAAC GGAGGCTAAATATCACCATGTTATCTTTTCCTCTTTTTTTTTTTCATATTTTAAGAAAACGATACCGATGTGTTCTCTAGTGCTAATGGTT AGCGAGTTCGCTTGCTGTCATAACCAATTCTCTTGGTCGTTTATGTTCGA                                                                                                                     ]
[+] EMBL BI800337             [                                                                                                                                                                                                                                                                          CGCTAGTGCAGGAGAAGAAAGACGAGCTGTTCCATCTGCTACTTCAGATGGATCTTCACCATGGCTCGTGTGAAAAAAGT GCCGAGGAGAACCAAGCCATACTGAGGCTGCTTTGGCCATTCCGTG CTGAGACGCGAGATAATGGTACCTTGTCCGGTGCAGATACGAAAAACTT GCCCATCGATACGTCCTACCTGTGTCCATTATTTTGAGTGGTATCATCATCGTCGCTCA GGCCATTTT ATATCTCACCTCTGAAATGGGGGCCCTGCTCGTTCGAAGAATAAGTTATCTAACGGTGTGGATCCCCATGGTGC GGAGGCTAAATATCACCATGTTATCTTTTCCTC TTTTTTTTTTCATATTTTAAGAAAACGATACCGATGTGTTCTCTAGTGCTAATGGTT AGCGAGTTCGCTTGCTGTCAAAAaaa                                                                                                                                             ]
[-] EMBL BU673687             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGTTATCTAACGGTGTGGATCCCCATGGTCC GGAGGCTAAATATCACCATGTTATCTTTTCCTCTTTTTTTTTTTCATATTTTAAGAAAACGATACCGATGTGTTCTCTAGTGCTAATGGTT AGCGAGTTCGCTTGCTGTCATAACCAATTCTCTTGTTCGTCAATGTTCGAATTGTCAATGTCTTCTTTCTCTGAAACTAGCGAAGTGCATGTGCCTTTGCACAAATCTAAATAAATTGTTAAACACAACATGCTCATCGTTTTTTTGGAGAAAAGGCATAAGCCCAG]


>consensus_12464#0 GATAATCCCTTTCCTCTCCTCTCCGTGGGGGTGCTGTGTCCACCTTCGGCCGCCGCCATG GACAGGAATGGTGTTAGCCACTAAAAAAAACTAAATAAATAAAAGGGCCTCCGCTGGGAA CACACAAAGGCCAAGGCGGAGGTGGGGAGGTGCCTGTAGAGCGATTGGATTCGTATATAA AGAAAAGCATCGTTTGCCTTGCCCAAATCCTGCCGCAGATGCCAAGGTTCATAACAACAT AGATCCTGCAAGTCTTGAGACGCTAGTGCAGGAGAAGAAAGACGAGCTGTTCCGTCTGCT ACTTCAGATGGATCTTCACAATGGCTCGTGTGAAAAAAGTGCCGAGGAGAACAAAGCCAT ACTGAGGCTGCTTCGGCAATTCCGTGCTGAGACGCGAGATAATGGTACCTTGTCCGGTGC TGATACGAAAAACTTGGCCAATCGATACGTCCTACCTGTGTCCATTATTTTGAGTGGTAT CATCATCGTCGCTCAGGGCCATTTTATATCTCACCTCTGAAATGGGGGCCCTGCTCGTTC GAAGAATAAGTTATCTAACGGTGTGGATCCCCATGGTGCGGAGGCTAAATATCACCATGT TATCTTTTCCTCTTTTTTTTTTTCATATTTTAAGAAAACGATACCGATGTGTTCTCTAGT GCTAATGGTTAGCGAGTTCGCTTGCTGTCATAACCAATTCTCTTGTTCGTCTATGTTCGA ATTGTCAATGTCTTCTTTCTCTGAAACTAGCGAAGTGCATGTGCCTTTGCACAAATCTAA ATAAATTGTTAAACACAACATGCTCATCGTTTTTTTGGAGAAAAGGCATAAGCCCAG



consensusID : consensus_12464#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 564
fasta sequence
                              [CCAAGGCGGAGGTGGGGAGGTGCCTGTAAAACGATTGGATTCGTATAAAGAAAAGATGCCAAGTTTCATAACAACATAGATCCTGCAAGTCTTTAGACGCTAGTGCAGGAGAAAAAAAACGAGCTGTTCCATCTGCTACTTCAGAGGGATTTTCCCAATGGCTCGTGTGAAAAAAGTGCCGAGGAGAACAAAGCCATACTGAGGCTGCTTTGGCAATTCCGTGCTGAAACGCGAAATAATGGTCCGGTGCTGATACGAAAAACTTGGCCCATCGAAACGTCCCACCTGGGTCCATTATTTTGAGGGGGATCATCATCGTCGCTCAGGGCCCTTTTATATTTCCCCTTTGAAAAGGGGGCCCTGCTCGTTTGAAAAATAAGTTATCTAACGGTGTGGATCCCCATGGGGCGGAGGCTAAAAATCCCCAAGGTATCTTTTCCTCTTTTTTTTTTTCAAATTTTAAGAAAACGAAACCGATGTGTTTTTTAGTGCTAAAGGTTAGCGAGTTCGCTTGCTGTCAAAACCAATTTTTTTGTTTGTTTAAGTTCGAAATGTCAAAGTTTT]

[-] EMBL BI306600             [CCAAGGCGGAGGTGGGGAGGTGCCTGTAAAACGATTGGATTCGTATAAAGAAAAGATGCCAAGTTTCATAACAACATAGATCCTGCAAGTCTTTAGACGCTAGTGCAGGAGAAAAAAAACGAGCTGTTCCATCTGCTACTTCAGAGGGATTTTCCCAATGGCTCGTGTGAAAAAAGTGCCGAGGAGAACAAAGCCATACTGAGGCTGCTTTGGCAATTCCGTGCTGAAACGCGAAATAATGGTCCGGTGCTGATACGAAAAACTTGGCCCATCGAAACGTCCCACCTGGGTCCATTATTTTGAGGGGGATCATCATCGTCGCTCAGGGCCCTTTTATATTTCCCCTTTGAAAAGGGGGCCCTGCTCGTTTGAAAAATAAGTTATCTAACGGTGTGGATCCCCATGGGGCGGAGGCTAAAAATCCCCAAGGTATCTTTTCCTCTTTTTTTTTTTCAAATTTTAAGAAAACGAAACCGATGTGTTTTTTAGTGCTAAAGGTTAGCGAGTTCGCTTGCTGTCAAAACCAATTTTTTTGTTTGTTTAAGTTCGAAATGTCAAAGTTTT]


>consensus_12464#1 CCAAGGCGGAGGTGGGGAGGTGCCTGTAAAACGATTGGATTCGTATAAAGAAAAGATGCC AAGTTTCATAACAACATAGATCCTGCAAGTCTTTAGACGCTAGTGCAGGAGAAAAAAAAC GAGCTGTTCCATCTGCTACTTCAGAGGGATTTTCCCAATGGCTCGTGTGAAAAAAGTGCC GAGGAGAACAAAGCCATACTGAGGCTGCTTTGGCAATTCCGTGCTGAAACGCGAAATAAT GGTCCGGTGCTGATACGAAAAACTTGGCCCATCGAAACGTCCCACCTGGGTCCATTATTT TGAGGGGGATCATCATCGTCGCTCAGGGCCCTTTTATATTTCCCCTTTGAAAAGGGGGCC CTGCTCGTTTGAAAAATAAGTTATCTAACGGTGTGGATCCCCATGGGGCGGAGGCTAAAA ATCCCCAAGGTATCTTTTCCTCTTTTTTTTTTTCAAATTTTAAGAAAACGAAACCGATGT GTTTTTTAGTGCTAAAGGTTAGCGAGTTCGCTTGCTGTCAAAACCAATTTTTTTGTTTGT TTAAGTTCGAAATGTCAAAGTTTT



consensusID : consensus_12464#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 465
fasta sequence
                              [GTCCGGTGTCTGATACGTAAAAACTTGGCCAATTCGATATCGTCCTACCTGTGTCCATTATATTTGAGTGGTATCATCATNCGTCGCCTCAGGGCCATTTTNATATCTCACCTTCTGAAATGGGGGCCACTGTCTCGTTCGAAGAATNNAAGTTATCTAACAGGTGTGGATCACCCATGGTGCAGGAGGCTNAAATATCACACATGTTATCATTTTCCTCATTTTTTNTTTTTCATATCTTTAAGAAAACGATGACCAGATGTGTTCATCTAGTGCTAATGGTTTAGCCGAGTTNCGCTTGNCTGTCATAACCAATTCTCATTGTTCGNTCTATGTNTCGAATTGTCAATGTCTTCTTTCTTCTGAAACTAGCAGAAGTGCATGTGCCATTTGCAACAAATTCTAAATAAATTGTTAAACAANACATGCTCATCGTTTTTTNTGGAGAAAAGGCATAAGCACCAG]

[-] EMBL CB965685             [GTCCGGTGTCTGATACGTAAAAACTTGGCCAATTCGATATCGTCCTACCTGTGTCCATTATATTTGAGTGGTATCATCATNCGTCGCCTCAGGGCCATTTTNATATCTCACCTTCTGAAATGGGGGCCACTGTCTCGTTCGAAGAATNNAAGTTATCTAACAGGTGTGGATCACCCATGGTGCAGGAGGCTNAAATATCACACATGTTATCATTTTCCTCATTTTTTNTTTTTCATATCTTTAAGAAAACGATGACCAGATGTGTTCATCTAGTGCTAATGGTTTAGCCGAGTTNCGCTTGNCTGTCATAACCAATTCTCATTGTTCGNTCTATGTNTCGAATTGTCAATGTCTTCTTTCTTCTGAAACTAGCAGAAGTGCATGTGCCATTTGCAACAAATTCTAAATAAATTGTTAAACAANACATGCTCATCGTTTTTTNTGGAGAAAAGGCATAAGCACCAG]


>consensus_12464#2 GTCCGGTGTCTGATACGTAAAAACTTGGCCAATTCGATATCGTCCTACCTGTGTCCATTA TATTTGAGTGGTATCATCATNCGTCGCCTCAGGGCCATTTTNATATCTCACCTTCTGAAA TGGGGGCCACTGTCTCGTTCGAAGAATNNAAGTTATCTAACAGGTGTGGATCACCCATGG TGCAGGAGGCTNAAATATCACACATGTTATCATTTTCCTCATTTTTTNTTTTTCATATCT TTAAGAAAACGATGACCAGATGTGTTCATCTAGTGCTAATGGTTTAGCCGAGTTNCGCTT GNCTGTCATAACCAATTCTCATTGTTCGNTCTATGTNTCGAATTGTCAATGTCTTCTTTC TTCTGAAACTAGCAGAAGTGCATGTGCCATTTGCAACAAATTCTAAATAAATTGTTAAAC AANACATGCTCATCGTTTTTTNTGGAGAAAAGGCATAAGCACCAG



consensusID : consensus_12464#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 411
fasta sequence
                              [ATATTGCGTGCAGGCTGGCAAGGGGGCACAATGTTGTGAATGATGTCTGCAACTCTGCTGGGAAATATTTGGGGGGCCCTGGCTGCAGTTGCGAAAGAAATGAAAGTTGATGGCGTGAACAGGTGGTGGGATGCTCCCATTGGGTGCGGAGGCTAAATGATGCACCAATGGTTGATGCGTGTGTGTGCCTGCTGTGTGTGGTCTGTGTTGCATGATGTGTTGAAGAGAAAACGATGACCGATTGTGGTTGCTGCTGAGTGGCTGAATGGGTTAAGCGAGTGTGCGCATTGGCTGGTGCATGAACCAATTCTCTTGTTCGTCTATGTTCGAATTGTCAATGTCTTCTTTCTCTGAAACTAGCGAAGTGCATGTGCCTTTGCAACAAATCTAAATAAATTGTTAAAAAAAAAA]

[+] EMBL BI802692             [ATATTGCGTGCAGGCTGGCAAGGGGGCACAATGTTGTGAATGATGTCTGCAACTCTGCTGGGAAATATTTGGGGGGCCCTGGCTGCAGTTGCGAAAGAAATGAAAGTTGATGGCGTGAACAGGTGGTGGGATGCTCCCATTGGGTGCGGAGGCTAAATGATGCACCAATGGTTGATGCGTGTGTGTGCCTGCTGTGTGTGGTCTGTGTTGCATGATGTGTTGAAGAGAAAACGATGACCGATTGTGGTTGCTGCTGAGTGGCTGAATGGGTTAAGCGAGTGTGCGCATTGGCTGGTGCATGAACCAATTCTCTTGTTCGTCTATGTTCGAATTGTCAATGTCTTCTTTCTCTGAAACTAGCGAAGTGCATGTGCCTTTGCAACAAATCTAAATAAATTGTTAAAAAAAAAA]


>consensus_12464#3 ATATTGCGTGCAGGCTGGCAAGGGGGCACAATGTTGTGAATGATGTCTGCAACTCTGCTG GGAAATATTTGGGGGGCCCTGGCTGCAGTTGCGAAAGAAATGAAAGTTGATGGCGTGAAC AGGTGGTGGGATGCTCCCATTGGGTGCGGAGGCTAAATGATGCACCAATGGTTGATGCGT GTGTGTGCCTGCTGTGTGTGGTCTGTGTTGCATGATGTGTTGAAGAGAAAACGATGACCG ATTGTGGTTGCTGCTGAGTGGCTGAATGGGTTAAGCGAGTGTGCGCATTGGCTGGTGCAT GAACCAATTCTCTTGTTCGTCTATGTTCGAATTGTCAATGTCTTCTTTCTCTGAAACTAG CGAAGTGCATGTGCCTTTGCAACAAATCTAAATAAATTGTTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12464#0      GATAATCCCTTTCCTCTCCTCTCCGTGGGGGTGCTGTGTCCACCTTCGGCCGCCGCCATG 60
consensus_12464#1      ------------------------------------------------------------
consensus_12464#2      ------------------------------------------------------------
consensus_12464#3      ------------------------------------------------------------
                                                                                   

consensus_12464#0      GACAGGAATGGTGTTAGCCACTAAAAAAAACTAAATAAATAAAAGGGCCTCCGCTGGGAA 120
consensus_12464#1      ------------------------------------------------------------
consensus_12464#2      ------------------------------------------------------------
consensus_12464#3      ------------------------------------------------------------
                                                                                   

consensus_12464#0      CACACAAAGGCCAAGGCGGAGGTGGGGAGGTGCCTGTAGAGCGATTGGATTCGTATATAA 180
consensus_12464#1      ----------CCAAGGCGGAGGTGGGGAGGTGCCTGTAAAACGATTGGATTCGTAT--AA 48
consensus_12464#2      ------------------------------------------------------------
consensus_12464#3      ------------------------------------------------------------
                                                                                   

consensus_12464#0      AGAAAAGCATCGTTTGCCTTGCCCAAATCCTGCCGCAGATGCCAAGGTTCATAACAACAT 240
consensus_12464#1      AGAAAAG-------------------------------ATGCCAAGTTTCATAACAACAT 77
consensus_12464#2      ------------------------------------------------------------
consensus_12464#3      ------------------------------------------------------------
                                                                                   

consensus_12464#0      AGATCCTGCAAGTCTTGAGACGCTAGTGCAGGAGAAGAAAGACGAGCTGTTCCGTCTGCT 300
consensus_12464#1      AGATCCTGCAAGTCTTTAGACGCTAGTGCAGGAGAAAAAAAACGAGCTGTTCCATCTGCT 137
consensus_12464#2      ------------------------------------------------------------
consensus_12464#3      ----------------------------------------------ATATTGCGTGCAGG 14
                                                                                   

consensus_12464#0      ACTTCAGATGGATCTTCACAATGGCTCGTGTGAAAAAAGTGCCGAGGAGAACAAAGCCAT 360
consensus_12464#1      ACTTCAGAGGGATTTTCCCAATGGCTCGTGTGAAAAAAGTGCCGAGGAGAACAAAGCCAT 197
consensus_12464#2      ------------------------------------------------------------
consensus_12464#3      CTGGCAAGGGGG----CACAATGT----TGTGAATGATGTCTGCAACTCTGCTGGGAAAT 66
                                                                                   

consensus_12464#0      ACTGAGGCTGCTTCGGCAATTCCGTGCTGAGACGCGAGATAATGGTACCTTGTCCGGTG- 419
consensus_12464#1      ACTGAGGCTGCTTTGGCAATTCCGTGCTGAAACGCGAAATAATGGT-------CCGGTG- 249
consensus_12464#2      ---------------------------------------------------GTCCGGTGT 9
consensus_12464#3      ATTTGGGGGGCCCTGGC--TGCAGTTGCGAAA---GAAATGAAAGT--------TGATG- 112
                                                                              * ** 

consensus_12464#0      CTGATACG-AAAAACTTGGCCAAT-CGATA-CGTCCTACCTGTGTCCATTAT-TTTGAGT 475
consensus_12464#1      CTGATACG-AAAAACTTGGCCCAT-CGAAA-CGTCCCACCTGGGTCCATTAT-TTTGAGG 305
consensus_12464#2      CTGATACGTAAAAACTTGGCCAATTCGATATCGTCCTACCTGTGTCCATTATATTTGAGT 69
consensus_12464#3      -----GCGTGAACAGGTGGT------GGGA-TGCTCCCATTGGGTGCGGAGGCTAAATGA 160
                             **  ** *  ***       *  *  *  *    ** ** *      *    * 

consensus_12464#0      GGTATCATCATC-GTCGC-TCAGGGCC-ATTTTATATCTCACCTC-TGAAATGGGGGCC- 530
consensus_12464#1      GGGATCATCATC-GTCGC-TCAGGGCC-CTTTTATATTTCCCCTT-TGAAAAGGGGGCC- 360
consensus_12464#2      GGTATCATCATNCGTCGCCTCAGGGCCATTTTNATATCTCACCTTCTGAAATGGGGGCCA 129
consensus_12464#3      TGCACCAATGGTTGATGCGTGTGTGTGCCTGCTGTGTGTGGTCTG-------TGTTGCA- 212
                        * * **      *  ** *  * *    *    * * *   **         *  **  

consensus_12464#0      CTG-CTCGTTCGAAGAATAA--GTTATCTAAC-GGTGTGGATC-CCCATGGTGC-GGAGG 584
consensus_12464#1      CTG-CTCGTTTGAAAAATAA--GTTATCTAAC-GGTGTGGATC-CCCATGGGGC-GGAGG 414
consensus_12464#2      CTGTCTCGTTCGAAGAATNNAAGTTATCTAACAGGTGTGGATCACCCATGGTGCAGGAGG 189
consensus_12464#3      -TGATGTGTT-GAAGAGAAAACGATGACCGATTGTGGTTGCTGCTGAGTGGCTGAATGGG 270
                        **    *** *** *      * *  *  *  *  ** * *      ***       **

consensus_12464#0      CTAAAT-ATCAC-CATGTTATC-TTTTCCTC--TTTTTTTTTTTCATAT-TTTAAGAAAA 638
consensus_12464#1      CTAAAA-ATCCC-CAAGGTATC-TTTTCCTC--TTTTTTTTTTTCAAAT-TTTAAGAAAA 468
consensus_12464#2      CTNAAATATCACACATGTTATCATTTTCCTCATTTTTTNTTTTTCATATCTTTAAGAAAA 249
consensus_12464#3      TTAAGCGAGTGTGCGCATTGGC-TGGTGCATGAACCAATTCTCTTGTTCGTCTATGTT-- 327
                        * *   *     *    *  * *  * *          * * *      * ** *    

consensus_12464#0      CGA-TACC-GATGTGTTC-TCTAGTGCTAATGGTTAG--CGAGTTC-GCTTGC-TGTCAT 691
consensus_12464#1      CGA-AACC-GATGTGTTT-TTTAGTGCTAAAGGTTAG--CGAGTTC-GCTTGC-TGTCAA 521
consensus_12464#2      CGATGACCAGATGTGTTCATCTAGTGCTAATGGTTTAGCCGAGTTNCGCTTGNCTGTCAT 309
consensus_12464#3      CGAATTGTCAATGTCTTCTTTCTCTG----AAACTAG--CGAAGTGCATGTGC-CTTTGC 380
                       ***       **** **  *    **        *    ***  *     **    *   

consensus_12464#0      AACCAATTCTC-TTGTTCGTC-TATGTT-CGAATTGTCAATGTCTTCTTTCTCTGAAACT 748
consensus_12464#1      AACCAATTTTT-TTGTTTGTT-TAAGTT-CGAAATGTCAAAGTTTT-------------- 564
consensus_12464#2      AACCAATTCTCATTGTTCGNTCTATGTNTCGAATTGTCAATGTCTTCTTTCTTCTGAAAC 369
consensus_12464#3      AACAAATCTAAATAAATTGTT--AAAAAAAAAA--------------------------- 411
                       *** ***     *   * *    *       **                           

consensus_12464#0      AGCGAAGTGCATGTGC-----CTTTGCACAAATCTAAATAAATTGTTAAACACAACATGC 803
consensus_12464#1      ------------------------------------------------------------
consensus_12464#2      TAGCAGAAGTGCATGTGCCATTTGCAACAAATTCTAAATAAATTGTTAAACAANACATGC 429
consensus_12464#3      ------------------------------------------------------------
                                                                                   

consensus_12464#0      TCATCGTTTTTTTGGAGAAAAGGCATAAGCCCAG-- 837
consensus_12464#1      ------------------------------------
consensus_12464#2      TCATCGTTTTTTNTGGAGAAAAGGCATAAGCACCAG 465
consensus_12464#3      ------------------------------------
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)