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Oryza sativa
cluster # 12510 cluster # 12510       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12510#0 length = 2226 sequences # 8  
consensus_12510#1 length = 580 sequences # 2  

consensusID : consensus_12510#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2226
fasta sequence
                              [GCGGGGCGCTTGTGTCGCGCGTAGGTAGCGTACTCCCTGTCCTGGGCTGTCGGTGCGCCGTGCGCCCGCGGCCGCGAGTACGACGCGCGCTGCGTGTGCGCCGTGCGCGGCTCACGGGAAACCAAGCCGTTTTTAATACGCGGCGCCGGTCAAGCCACACCGCCGGCATGTGACAGTGCGCGGAGCGGCATACGTACGCAGCAACGTCACTCGCGGCTCGGCTCGGGGAGCGCGTGAGCCCGCGCAAGGCGAGGCAGCTCAAGCAGAAGCACCGGAGGAGCTACTTCTACCTCCTCTCCTCCGACCCGTCGCCCAAGTACCGGATGGGGCAGTCCTGCCGCAAGAACAAGCGCAAGGAGCTCAGCAATGGCAAGTCGACGGCGCCGGAAGAGCAGCGCGGCGACGTCGAGGAGATCGCCTGGAGTCAGAAGGGGCAGCAAGATGGATCGGATTGCACCGACGACGGCCAGGCGGACATGGACGGCGAGGTTGCTGGTGGTCAGTATGTGATCAGGTACGAGAAGGACGGCGAGATGGAAAGGGTGCTCGAGAGGCAGGCCGAGCTGATCGGCCAGTATGAGGCGGAGGAAGAAGCTCAGAGGCAGTGGGAGAAGCAGTTCAACGAGAATCGGAGCTCAGCCAAGGTTCATGTTGAGGCAGAGAATAAGGCGTGCCAGATAGAAAATGGTTGGGAGCAGAGCAAGGAGCATTCTAGGCTCGCGGATCAAGCGGTTCATTGCAACGAAGAGGCAAAACCAGGCGTTAAAAATCACCCCAGCGCCAGCAACAACCGCTCTGCTGGACTTCTGTTGAATGGTTCCCTTCCTGAATCACCCCAAGACACATCAGGACAAGAAGCAGCAGCCGACCAACGTGACTCGCACGAGGAGCTTCACGGCCACTGTCATGCACAGTCTCAAGGAAACTCTAATGTCGCCGGCACAATGACAGGGAAGAATCAAGAACAAGGAAACGAGAATCCGGATGGATGTTCAAGCTACTGTGACATCAAAGCGCCATCAGATGGGAGCCCGTCAATGAGTGATGCCACCCTGAACAGCAAGGTCTCTGATTGGAGCTCATCACGCTTCCATGACCATGGCGACAACCAGGTCGATGCAGGGCCAGATCAACAGCCAACGAGCAACATGGACATAGAGTGTGTTCTTCAGGCACTTCAGCTTGCCAGGATTTCCCTGAGTCAGAAGCTGAGCAAGCCAGTTCCACCCAGCCAGGTGACGCTGGCGCTTCCTGCACCAGGGGACCATGAACATTCAGAAGACGACGGCTACTCCCCCGTCGACGACGAGTTCAATTCTGCAAGAGATGAGCTCTGCAGCTCAAGCCAATCTCCTGATCAGGAGATACTGGCTCTCCCTGCACCAGAGGATTACCATGACAGGGAGAATTTGCCTGCCAATGACGACGCTACCATTTCACTGACAGAGGAACAGACCAGTTCAAGCCCACACCGGCAGGAGATCCTGGCTCTCCCGGCTCCGGTAGATGATTACCACAGAGAGATAGTGGATGACATCAAGAT-ACCTATCTGCATTGCCGGCTTGTTTCGGTTGCCAACAGACTCATTTCCAAAGGACGAGATGGTCTCAACTTGCAACAAATATGGAGGTTCAGAGCTCAATCTGAGACCAACTGCAGCTGCTCCTCAGAACGCCTTCGTGAGCAACACTGCTGATCGTGTCACGGTAGCTCCGTCAGAGATAAGAGATGATCATGGCTTTTCAACGAGGCCATGTTACGATCCACACAGTTCTGGGCTGCTGTCTGTGCCTACTTCTGGTAGGTGTAGCACTCCAAGTTCAGATTTTACAATAAGGGGAGCTTCTTTCCTCTCCGGAATTCCCGGACTTGCTGAAGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCATGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAGTATTTCTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTTGACCAAGACATGGGAAGTGCGCCACTTTTTGACAATTGGTTCTCCCTCTGTCCCATAATATAAGGGATTTTGAGTTTTTGCTTGCACTGTTTGATCACTCATCTTATTCAAAAAAATTTGGAATTA]

[+] EMBL AK067838             [GCGGGGCGCTTGTGTCGCGCGTAGGTAGCGTACTCCCTGTCCTGGGCTGTCGGTGCGCCGTGCGCCCGCGGCCGCGAGTACGACGCGCGCTGCGTGTGCGCCGTGCGCGGCTCACGGGAAACCAAGCCGTTTTTAATACGCGGCGCCGGTCAAGCCACACCGCCGGCATGTGACAGTGCGCGGAGCGGCATACGTACGCAGCAACGTCACTCGCGGCTCGGCTCGGGGAGCGCGTGAGCCCGCGCAAGGCGAGGCAGCTCAAGCAGAAGCACCGGAGGAGCTACTTCTACCTCCTCTCCTCCGACCCGTCGCCCAAGTACCGGATGGGGCAGTCCTGCCGCAAGAACAAGCGCAAGGAGCTCAGCAATGGCAAGTCGACGGCGCCGGAAGAGCAGCGCGGCGACGTCGAGGAGATCGCCTGGAGTCAGAAGGGGCAGCAAGATGGATCGGATTGCACCGACGACGGCCAGGCGGACATGGACGGCGAGGTTGCTGGTGGTCAGTATGTGATCAGGTACGAGAAGGACGGCGAGATGGAAAGGGTGCTCGAGAGGCAGGCCGAGCTGATCGGCCAGTATGAGGCGGAGGAAGAAGCTCAGAGGCAGTGGGAGAAGCAGTTCAACGAGAATCGGAGCTCAGCCAAGGTTCATGTTGAGGCAGAGAATAAGGCGTGCCAGATAGAAAATGGTTGGGAGCAGAGCAAGGAGCATTCTAGGCTCGCGGATCAAGCGGTTCATTGCAACGAAGAGGCAAAACCAGGCGTTAAAAATCACCCCAGCGCCAGCAACAACCGCTCTGCTGGACTTCTGTTGAATGGTTCCCTTCCTGAATCACCCCAAGACACATCAGGACAAGAAGCAGCAGCCGACCAACGTGACTCGCACGAGGAGCTTCACGGCCACTGTCATGCACAGTCTCAAGGAAACTCTAATGTCGCCGGCACAATGACAGGGAAGAATCAAGAACAAGGAAACGAGAATCCGGATGGATGTTCAAGCTACTGTGACATCAAAGCGCCATCAGATGGGAGCCCGTCAATGAGTGATGCCACCCTGAACAGCAAGGTCTCTGATTGGAGCTCATCACGCTTCCATGACCATGGCGACAACCAGGTCGATGCAGGGCCAGATCAACAGCCAACGAGCAACATGGACATAGAGTGTGTTCTTCAGGCACTTCAGCTTGCCAGGATTTCCCTGAGTCAGAAGCTGAGCAAGCCAGTTCCACCCAGCCAGGTGACGCTGGCGCTTCCTGCACCAGGGGACCATGAACATTCAGAAGACGACGGCTACTCCCCCGTCGACGACGAGTTCAATTCTGCAAGAGATGAGCTCTGCAGCTCAAGCCAATCTCCTGATCAGGAGATACTGGCTCTCCCTGCACCAGAGGATTACCATGACAGGGAGAATTTGCCTGCCAATGACGACGCTACCATTTCACTGACAGAGGAACAGACCAGTTCAAGCCCACACCGGCAGGAGATCCTGGCTCTCCCGGCTCCGGTAGATGATTACCACAGAGAGATAGTGGATGACATCAAGAT ACCTATCTGCATTGCCGGCTTGTTTCGGTTGCCAACAGACTCATTTCCAAAGGACGAGATGGTCTCAACTTGCAACAAATATGGAGGTTCAGAGCTCAATCTGAGACCAACTGCAGCTGCTCCTCAGAACGCCTTCGTGAGCAACACTGCTGATCGTGTCACGGTAGCTCCGTCAGAGATAAGAGATGATCATGGCTTTTCAACGAGGCCATGTTACGATCCACACAGTTCTGGGCTGCTGTCTGTGCCTACTTCTGGTAGGTGTAGCACTCCAAGTTCAGATTTTACAATAAGGGGAGCTTCTTTCCTCTCCGGAATTCCCGGACTTGCTGAAGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCATGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAGTATTTCTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTTGACCAAGACATGGGAAGTGCG                                                                                                         ]
[+] EMBL OSS12805A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAAGGTCACCTATCTGCATTGCCGGCTTGTTTCGGTTGCCAACAGACTCATTTCCAAAGGACGAGATGGTCTCAACTTGCAACAAATATGGAGGTTCAGAGCTCAATCTGAGACCAACTGCAGCTGCTCCTCAGAACGCCTTCGTGAGCAACACTGCTGATCGTGTCACGGTAGCTCCGTCAGAGATAAGAGATGATCATGGCTTTTCAACGAGGCCATGTTACGATCCACACAGTTCTGGGCTGCTGTCTGTGCCTACTTCTGGTAGGTGTAGCACTCCAAGTTCAGATTTTACAATAAGGGGAGCTTCTTTCCT                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU096357             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGAT ACCTATCTGCATTGCCGGCTTGTTTCGGTTGCCAACAGACTCATTTCCAAAGGACGAGATGGTCTCAACTTGCAACAAATATGGAGGTTCAGAGCTCAATCTGAGACCAACTGCAGCTGCTCCTCAGAACGCCTTCGTGAGCAACACTGCTGATCGTGTCACGGTAGCTCCGTCAGAGATAAGAGATGATCATGGCTTTTCAACGAGGCCATGTTACGATCCACACAGTTCTGGGCTGCTGTCTGTGCCTACTTCTGGTAGGTGTAGCACTCCAAGTTCAGA TTTACAATAAGGGGAGCTTCTTTCCTCTCCGGAA TCCCGGACTTGCTGAAGATTTCAGGAAGGGAAGGCCCCTT                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB965386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGAAGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCATGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAGTATTTCTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTTGACCAAGACATGGGAAGTGCGCCACTTTTTGACAATTGGTTCTCCCTCTGTCCCATAATATAAGGGATTTTGAGTTTTTGCTTGCACTGTTTGATCACTCATCTTATTCAAAAAAATTTGGAATTA]
[-] EMBL CB965854             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGAAGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCATGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAGTATTTCTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTTGACCCAGACATGGGAAGTGCGCCCCTTTTTGACCATTGGTTCTCCCTCTGTCCCATAATATAAGGGATTTTGAGTTTTTGCTTGCACTGTTTGATCACTCATCTTATTCAAAAAAATTTGGAATTA]
[-] EMBL BI305545             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCATGCAGCGTGGCTGCGATTACACTATTTTTAATAAGTGGATGCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAGTATTTTTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTTGACCAAGACATGGGAAGTGCGCCACTTTTTGACAATTGGTTCTCCCTCTGTCCCATAAAATAAGGGATTTTGAGTTTTTGCTTGCACTGTTTGATCACTCATCTTATTCAAAAAAATTTGGAATTA]
[-] EMBL BI305958             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCATGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAGTATTTTTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTTGACCAAGACATGGGAAGTGCGCCACTTTTTGACAATTGGTTCTCCCTCTGTCCCATAATATAAGGGATTTTGAGTTTTTGCTTGCACTGTTTGATCACTCATCTTATTCAAAAAAATTTGGAATTA]
[-] EMBL BI306305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     acATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAACCCTGTTCATGCAGCGTGGCTGCGATTACACTATTTTTAATAAGTGGACCCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCCTTGATAATTGACAAGTAGTATTTCTCATGGCTGCATATCCTTGTGAAGAAGGGGTTCGATTATTAGGGGAGATAATTTGACCAAAACATGGGAAGTGTGCCCCTTTTTGACAAATGGTTCTCCCTCTGTCCCATAAAATAAGGGATTTTGAGTTTTTGCTTGCACTGTTTGATCACTCATCTTATTTTAAAAAATTTGGAATTA]


>consensus_12510#0 GCGGGGCGCTTGTGTCGCGCGTAGGTAGCGTACTCCCTGTCCTGGGCTGTCGGTGCGCCG TGCGCCCGCGGCCGCGAGTACGACGCGCGCTGCGTGTGCGCCGTGCGCGGCTCACGGGAA ACCAAGCCGTTTTTAATACGCGGCGCCGGTCAAGCCACACCGCCGGCATGTGACAGTGCG CGGAGCGGCATACGTACGCAGCAACGTCACTCGCGGCTCGGCTCGGGGAGCGCGTGAGCC CGCGCAAGGCGAGGCAGCTCAAGCAGAAGCACCGGAGGAGCTACTTCTACCTCCTCTCCT CCGACCCGTCGCCCAAGTACCGGATGGGGCAGTCCTGCCGCAAGAACAAGCGCAAGGAGC TCAGCAATGGCAAGTCGACGGCGCCGGAAGAGCAGCGCGGCGACGTCGAGGAGATCGCCT GGAGTCAGAAGGGGCAGCAAGATGGATCGGATTGCACCGACGACGGCCAGGCGGACATGG ACGGCGAGGTTGCTGGTGGTCAGTATGTGATCAGGTACGAGAAGGACGGCGAGATGGAAA GGGTGCTCGAGAGGCAGGCCGAGCTGATCGGCCAGTATGAGGCGGAGGAAGAAGCTCAGA GGCAGTGGGAGAAGCAGTTCAACGAGAATCGGAGCTCAGCCAAGGTTCATGTTGAGGCAG AGAATAAGGCGTGCCAGATAGAAAATGGTTGGGAGCAGAGCAAGGAGCATTCTAGGCTCG CGGATCAAGCGGTTCATTGCAACGAAGAGGCAAAACCAGGCGTTAAAAATCACCCCAGCG CCAGCAACAACCGCTCTGCTGGACTTCTGTTGAATGGTTCCCTTCCTGAATCACCCCAAG ACACATCAGGACAAGAAGCAGCAGCCGACCAACGTGACTCGCACGAGGAGCTTCACGGCC ACTGTCATGCACAGTCTCAAGGAAACTCTAATGTCGCCGGCACAATGACAGGGAAGAATC AAGAACAAGGAAACGAGAATCCGGATGGATGTTCAAGCTACTGTGACATCAAAGCGCCAT CAGATGGGAGCCCGTCAATGAGTGATGCCACCCTGAACAGCAAGGTCTCTGATTGGAGCT CATCACGCTTCCATGACCATGGCGACAACCAGGTCGATGCAGGGCCAGATCAACAGCCAA CGAGCAACATGGACATAGAGTGTGTTCTTCAGGCACTTCAGCTTGCCAGGATTTCCCTGA GTCAGAAGCTGAGCAAGCCAGTTCCACCCAGCCAGGTGACGCTGGCGCTTCCTGCACCAG GGGACCATGAACATTCAGAAGACGACGGCTACTCCCCCGTCGACGACGAGTTCAATTCTG CAAGAGATGAGCTCTGCAGCTCAAGCCAATCTCCTGATCAGGAGATACTGGCTCTCCCTG CACCAGAGGATTACCATGACAGGGAGAATTTGCCTGCCAATGACGACGCTACCATTTCAC TGACAGAGGAACAGACCAGTTCAAGCCCACACCGGCAGGAGATCCTGGCTCTCCCGGCTC CGGTAGATGATTACCACAGAGAGATAGTGGATGACATCAAGATACCTATCTGCATTGCCG GCTTGTTTCGGTTGCCAACAGACTCATTTCCAAAGGACGAGATGGTCTCAACTTGCAACA AATATGGAGGTTCAGAGCTCAATCTGAGACCAACTGCAGCTGCTCCTCAGAACGCCTTCG TGAGCAACACTGCTGATCGTGTCACGGTAGCTCCGTCAGAGATAAGAGATGATCATGGCT TTTCAACGAGGCCATGTTACGATCCACACAGTTCTGGGCTGCTGTCTGTGCCTACTTCTG GTAGGTGTAGCACTCCAAGTTCAGATTTTACAATAAGGGGAGCTTCTTTCCTCTCCGGAA TTCCCGGACTTGCTGAAGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCA TGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCA TGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAG TATTTCTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTT GACCAAGACATGGGAAGTGCGCCACTTTTTGACAATTGGTTCTCCCTCTGTCCCATAATA TAAGGGATTTTGAGTTTTTGCTTGCACTGTTTGATCACTCATCTTATTCAAAAAAATTTG GAATTA



consensusID : consensus_12510#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 580
fasta sequence
                              [ANCTTCCATTTCCAAAGGACGAGATGGTCTCAACTTGCAACAAATATGGAGGTTCAGAGCTCAATCTGAGACCAACTGCAGCTGCTCCTCAGAACGCCTTCGTGAGCAACACTGCTGATCGTGTCACGGTAGCTCCGTCAGAGATAAGAGATGATCATGGCTTTTCAACGAGGCCATGTTACGATCCACACAGTTCTGGGCTGCTGTCTGTGCCTACTTCTGGTAGGTGTAGCACTCCAAGTTCAGATTTTNCAATAAGGGGAGCTTCTTTCCTCTCCGGAATTCCCGGACTTGCTGAAGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCATGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAGTATTTCTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTTGACCAAGACATGGGAAGTGCGCCACTTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU096358             [ANCTTCCATTTCCAAAGGACGAGATGGTCTCAACTTGCAACAAATATGGAGGTTCAGAGCTCAATCTGAGACCAACTGCAGCTGCTCCTCAGAACGCCTTCGTGAGCAACACTGCTGATCGTGTCACGGTAGCTCCGTCAGAGATAAGAGATGATCATGGCTTTTCAACGAGGCCATGTTACGATCCACACAGTTCTGGGCTGCTGTCTGTGCCTACTTCTGGTAGGTGTAGCACTCCAAGTTCAGATTTTNCAATAAGGGGAGCTTCTTTCCTCTCCGGAATTCCCGGACTTGCTGAAGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCATGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAGTATTTCTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTTGACCAAGACATGGGAAGTGCGCCACTTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU088697             [                                                                                                                                                         ATCATGGCTTTTCAACGAGGCCATNTTACGATCCACACAGTTCTGGGCTGCTGTCTGTNCCTACTTCTGGTAGGTGTAGCACTCCAAGTTCAGATTTTACAATAAGGGGAGCTTCTTTCCTCTCCGGAATTCCCGGACTTGCTGAAGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCATGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAGTATTTCTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTTGACCAAGACATGGGAAGTGCGCCACTTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12510#1 ANCTTCCATTTCCAAAGGACGAGATGGTCTCAACTTGCAACAAATATGGAGGTTCAGAGC TCAATCTGAGACCAACTGCAGCTGCTCCTCAGAACGCCTTCGTGAGCAACACTGCTGATC GTGTCACGGTAGCTCCGTCAGAGATAAGAGATGATCATGGCTTTTCAACGAGGCCATGTT ACGATCCACACAGTTCTGGGCTGCTGTCTGTGCCTACTTCTGGTAGGTGTAGCACTCCAA GTTCAGATTTTNCAATAAGGGGAGCTTCTTTCCTCTCCGGAATTCCCGGACTTGCTGAAG ATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCATGCAGCGTGGCTGCGATT ACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCATGAATTTGTTCTCTTTGC TTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAGTATTTCTCATGGCTGCAT ATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTTGACCAAGACATGGGAAGT GCGCCACTTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12510#0      GCGGGGCGCTTGTGTCGCGCGTAGGTAGCGTACTCCCTGTCCTGGGCTGTCGGTGCGCCG 60
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      TGCGCCCGCGGCCGCGAGTACGACGCGCGCTGCGTGTGCGCCGTGCGCGGCTCACGGGAA 120
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      ACCAAGCCGTTTTTAATACGCGGCGCCGGTCAAGCCACACCGCCGGCATGTGACAGTGCG 180
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CGGAGCGGCATACGTACGCAGCAACGTCACTCGCGGCTCGGCTCGGGGAGCGCGTGAGCC 240
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CGCGCAAGGCGAGGCAGCTCAAGCAGAAGCACCGGAGGAGCTACTTCTACCTCCTCTCCT 300
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CCGACCCGTCGCCCAAGTACCGGATGGGGCAGTCCTGCCGCAAGAACAAGCGCAAGGAGC 360
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      TCAGCAATGGCAAGTCGACGGCGCCGGAAGAGCAGCGCGGCGACGTCGAGGAGATCGCCT 420
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      GGAGTCAGAAGGGGCAGCAAGATGGATCGGATTGCACCGACGACGGCCAGGCGGACATGG 480
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      ACGGCGAGGTTGCTGGTGGTCAGTATGTGATCAGGTACGAGAAGGACGGCGAGATGGAAA 540
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      GGGTGCTCGAGAGGCAGGCCGAGCTGATCGGCCAGTATGAGGCGGAGGAAGAAGCTCAGA 600
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      GGCAGTGGGAGAAGCAGTTCAACGAGAATCGGAGCTCAGCCAAGGTTCATGTTGAGGCAG 660
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      AGAATAAGGCGTGCCAGATAGAAAATGGTTGGGAGCAGAGCAAGGAGCATTCTAGGCTCG 720
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CGGATCAAGCGGTTCATTGCAACGAAGAGGCAAAACCAGGCGTTAAAAATCACCCCAGCG 780
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CCAGCAACAACCGCTCTGCTGGACTTCTGTTGAATGGTTCCCTTCCTGAATCACCCCAAG 840
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      ACACATCAGGACAAGAAGCAGCAGCCGACCAACGTGACTCGCACGAGGAGCTTCACGGCC 900
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      ACTGTCATGCACAGTCTCAAGGAAACTCTAATGTCGCCGGCACAATGACAGGGAAGAATC 960
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      AAGAACAAGGAAACGAGAATCCGGATGGATGTTCAAGCTACTGTGACATCAAAGCGCCAT 1020
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CAGATGGGAGCCCGTCAATGAGTGATGCCACCCTGAACAGCAAGGTCTCTGATTGGAGCT 1080
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CATCACGCTTCCATGACCATGGCGACAACCAGGTCGATGCAGGGCCAGATCAACAGCCAA 1140
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CGAGCAACATGGACATAGAGTGTGTTCTTCAGGCACTTCAGCTTGCCAGGATTTCCCTGA 1200
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      GTCAGAAGCTGAGCAAGCCAGTTCCACCCAGCCAGGTGACGCTGGCGCTTCCTGCACCAG 1260
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      GGGACCATGAACATTCAGAAGACGACGGCTACTCCCCCGTCGACGACGAGTTCAATTCTG 1320
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CAAGAGATGAGCTCTGCAGCTCAAGCCAATCTCCTGATCAGGAGATACTGGCTCTCCCTG 1380
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CACCAGAGGATTACCATGACAGGGAGAATTTGCCTGCCAATGACGACGCTACCATTTCAC 1440
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      TGACAGAGGAACAGACCAGTTCAAGCCCACACCGGCAGGAGATCCTGGCTCTCCCGGCTC 1500
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      CGGTAGATGATTACCACAGAGAGATAGTGGATGACATCAAGATACCTATCTGCATTGCCG 1560
consensus_12510#1      ------------------------------------------------------------
                                                                                   

consensus_12510#0      GCTTGTTTCGGTTGCCAACAGACTCATTTCCAAAGGACGAGATGGTCTCAACTTGCAACA 1620
consensus_12510#1      ------------------ANCTTCCATTTCCAAAGGACGAGATGGTCTCAACTTGCAACA 42
                                               ************************************

consensus_12510#0      AATATGGAGGTTCAGAGCTCAATCTGAGACCAACTGCAGCTGCTCCTCAGAACGCCTTCG 1680
consensus_12510#1      AATATGGAGGTTCAGAGCTCAATCTGAGACCAACTGCAGCTGCTCCTCAGAACGCCTTCG 102
                       ************************************************************

consensus_12510#0      TGAGCAACACTGCTGATCGTGTCACGGTAGCTCCGTCAGAGATAAGAGATGATCATGGCT 1740
consensus_12510#1      TGAGCAACACTGCTGATCGTGTCACGGTAGCTCCGTCAGAGATAAGAGATGATCATGGCT 162
                       ************************************************************

consensus_12510#0      TTTCAACGAGGCCATGTTACGATCCACACAGTTCTGGGCTGCTGTCTGTGCCTACTTCTG 1800
consensus_12510#1      TTTCAACGAGGCCATGTTACGATCCACACAGTTCTGGGCTGCTGTCTGTGCCTACTTCTG 222
                       ************************************************************

consensus_12510#0      GTAGGTGTAGCACTCCAAGTTCAGATTTTACAATAAGGGGAGCTTCTTTCCTCTCCGGAA 1860
consensus_12510#1      GTAGGTGTAGCACTCCAAGTTCAGATTTTNCAATAAGGGGAGCTTCTTTCCTCTCCGGAA 282
                       ***************************** ******************************

consensus_12510#0      TTCCCGGACTTGCTGAAGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCA 1920
consensus_12510#1      TTCCCGGACTTGCTGAAGATTTCAGGAAGGGAAGGCCCCTTGCAGATGCAGACCTGTTCA 342
                       ************************************************************

consensus_12510#0      TGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCA 1980
consensus_12510#1      TGCAGCGTGGCTGCGATTACACTATTTCTAATAAGTGGATGCTGTAGCTTGTAACATGCA 402
                       ************************************************************

consensus_12510#0      TGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAG 2040
consensus_12510#1      TGAATTTGTTCTCTTTGCTTTTTTTACTAGCGGAAGGCAGCACTGATAATTGACAAGTAG 462
                       ************************************************************

consensus_12510#0      TATTTCTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTT 2100
consensus_12510#1      TATTTCTCATGGCTGCATATCCTTGTGAAGAAGGCGTTCGATTACTAGGGGAGATAATTT 522
                       ************************************************************

consensus_12510#0      GACCAAGACATGGGAAGTGCGCCACTTTTTGACAATTGGTTCTCCCTCTGTCCCATAATA 2160
consensus_12510#1      GACCAAGACATGGGAAGTGCGCCACTTTTTGAAAAAAAAA---------AAAAAAAAAAA 573
                       ******************************** **                   * ** *

consensus_12510#0      TAAGGGATTTTGAGTTTTTGCTTGCACTGTTTGATCACTCATCTTATTCAAAAAAATTTG 2220
consensus_12510#1      AAAAAAA----------------------------------------------------- 580
                        **   *                                                     

consensus_12510#0      GAATTA 2226
consensus_12510#1      ------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)