cluster # 12552

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Oryza sativa
cluster # 12552 cluster # 12552 Sequences # 10 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12552#0 length = 1649 sequences # 1
consensus_12552#1 length = 908 sequences # 3

consensus_12552#2 length = 731 sequences # 3
consensus_12552#3 length = 694 sequences # 2
consensus_12552#4 length = 442 sequences # 1

consensusID : consensus_12552#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1649
fasta sequence

                              [CCTCACCGATCTCGCGACGATGGGTGATGTGGCCGCACCAGCTGCGGCGGCGCGGGCGGCGAGGCCGACGAGCCCGTTGCGCCCGCCCAAGGCGATCCGCAGCACCAAGCCAAGGGGCTCGACGAGGAGACCGTCATGGCACCATTCGTCAAGCACCTTGTCTCGGAGCCGGCCTGCTGGGATGCGCCTGCGTCGTCGTCGTCGTTGTCGAGCGCCTCGTCTCGGAGCCGGCGAGCCAGACTGCGCCTGCATCGTCGTCGTCTGCTCCCCCGGCAAGGTCCCCGGCCACCGCCCCCGTGCCGGTCGTCACCCCGCCCACCGCCGCATCGCTGTGGCCAACCCTCGCTGCCACCGCCACCGACCTCCTCCCGGAGCGCTCGCTTTCATCTCCTTCCCCCGTGCCGCTCGTCCCTCCGCACTTCACCATCGGCTCCCCGGCTGCCGATTCCCCTCAGCCGTCGCCCTCCTGGGCTCGCCGGCGTCCATGGCGGAGAAGCTCCCCGGCTGCTAATTCCCTCGACGACGGCGGTGAGGGTGCTGCGTCCGCCGGCAAGGACGACGAGGAACGGACGGGTCGCGGCGGCTGCTGGTGGAGCAGCGAGAGATGGAGGGGGGGGGGGATCACTGGCTAGCTGCAGTGGCAAGGACCAGCGAGTTCGAGGTGGAGTGCTCGCCGGTGTCCATGGTGGAGAAGTGAAGAAAGGAAGAGGGAGAGAGATGACGGAGGTTGACAGAAAACTGGATGGAAGTGGCATGGTTCCAATTTCCCCAAATTCTAGTGGCACGTAGCCGATATGCTCAATAGTAGTGGCATTTTTTCGAATTGGCATATTTGCAGTGGCATGGATCCAATTAACCCTTTTTTTTCCTCTGCTTGAAGCTTTCTAGTGTCAAGTTATCAACAATGTTTCCAGTCATCAGCGTGCAGGTGTTAGGAGACAAGTTTCTTTTCAGTAAAAATATTAAATTCTACTAGTACATCTTTTGATTAGAACTGTATGTCCAGCTTGTGATGTACCTAAGTTTTGTTAACATATGTCTGCCAATAACAGCATTAGTAATCATTATTGAAGAACTAATGTACGTCTTGTTTGCAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCACTAAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCAGCTTTAAGGTTAGAAGAATAGAAAAAAAGTTGTAAATGGTTGTGCTTCCTGTTGCTGTCAATGCTCAAATTGGAAGTGAGGAGACGGTAAATTTGCTCCTTGAGCTTCAATACAGCATTTTTCTTTTGGAGGTGCTGTCCAGAGTTTTGGAGCTCGACGGCGCCTTTTGCCTATGGACCTATGGAAGGCAGTTCTTCAGTCTTGCCCACGGTATTTGTTGATTAATCTTGTTCTTTAGTCTTCTTCAGAGTTCAGATTGTTTAGATTGTCTGATTTTCCACTTGCTCTTAAGATGTATTATAGGTTAATATAGCTAGTTGGGTTTCTGTTCTGGTTTCCTTGGTTTGACACTATTCAGGTTACTATTCTTGATTGGTTT]

[+] EMBL AK071473             [CCTCACCGATCTCGCGACGATGGGTGATGTGGCCGCACCAGCTGCGGCGGCGCGGGCGGCGAGGCCGACGAGCCCGTTGCGCCCGCCCAAGGCGATCCGCAGCACCAAGCCAAGGGGCTCGACGAGGAGACCGTCATGGCACCATTCGTCAAGCACCTTGTCTCGGAGCCGGCCTGCTGGGATGCGCCTGCGTCGTCGTCGTCGTTGTCGAGCGCCTCGTCTCGGAGCCGGCGAGCCAGACTGCGCCTGCATCGTCGTCGTCTGCTCCCCCGGCAAGGTCCCCGGCCACCGCCCCCGTGCCGGTCGTCACCCCGCCCACCGCCGCATCGCTGTGGCCAACCCTCGCTGCCACCGCCACCGACCTCCTCCCGGAGCGCTCGCTTTCATCTCCTTCCCCCGTGCCGCTCGTCCCTCCGCACTTCACCATCGGCTCCCCGGCTGCCGATTCCCCTCAGCCGTCGCCCTCCTGGGCTCGCCGGCGTCCATGGCGGAGAAGCTCCCCGGCTGCTAATTCCCTCGACGACGGCGGTGAGGGTGCTGCGTCCGCCGGCAAGGACGACGAGGAACGGACGGGTCGCGGCGGCTGCTGGTGGAGCAGCGAGAGATGGAGGGGGGGGGGGATCACTGGCTAGCTGCAGTGGCAAGGACCAGCGAGTTCGAGGTGGAGTGCTCGCCGGTGTCCATGGTGGAGAAGTGAAGAAAGGAAGAGGGAGAGAGATGACGGAGGTTGACAGAAAACTGGATGGAAGTGGCATGGTTCCAATTTCCCCAAATTCTAGTGGCACGTAGCCGATATGCTCAATAGTAGTGGCATTTTTTCGAATTGGCATATTTGCAGTGGCATGGATCCAATTAACCCTTTTTTTTCCTCTGCTTGAAGCTTTCTAGTGTCAAGTTATCAACAATGTTTCCAGTCATCAGCGTGCAGGTGTTAGGAGACAAGTTTCTTTTCAGTAAAAATATTAAATTCTACTAGTACATCTTTTGATTAGAACTGTATGTCCAGCTTGTGATGTACCTAAGTTTTGTTAACATATGTCTGCCAATAACAGCATTAGTAATCATTATTGAAGAACTAATGTACGTCTTGTTTGCAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCACTAAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCAGCTTTAAGGTTAGAAGAATAGAAAAAAAGTTGTAAATGGTTGTGCTTCCTGTTGCTGTCAATGCTCAAATTGGAAGTGAGGAGACGGTAAATTTGCTCCTTGAGCTTCAATACAGCATTTTTCTTTTGGAGGTGCTGTCCAGAGTTTTGGAGCTCGACGGCGCCTTTTGCCTATGGACCTATGGAAGGCAGTTCTTCAGTCTTGCCCACGGTATTTGTTGATTAATCTTGTTCTTTAGTCTTCTTCAGAGTTCAGATTGTTTAGATTGTCTGATTTTCCACTTGCTCTTAAGATGTATTATAGGTTAATATAGCTAGTTGGGTTTCTGTTCTGGTTTCCTTGGTTTGACACTATTCAGGTTACTATTCTTGATTGGTTT]




>consensus_12552#0
CCTCACCGATCTCGCGACGATGGGTGATGTGGCCGCACCAGCTGCGGCGGCGCGGGCGGC
GAGGCCGACGAGCCCGTTGCGCCCGCCCAAGGCGATCCGCAGCACCAAGCCAAGGGGCTC
GACGAGGAGACCGTCATGGCACCATTCGTCAAGCACCTTGTCTCGGAGCCGGCCTGCTGG
GATGCGCCTGCGTCGTCGTCGTCGTTGTCGAGCGCCTCGTCTCGGAGCCGGCGAGCCAGA
CTGCGCCTGCATCGTCGTCGTCTGCTCCCCCGGCAAGGTCCCCGGCCACCGCCCCCGTGC
CGGTCGTCACCCCGCCCACCGCCGCATCGCTGTGGCCAACCCTCGCTGCCACCGCCACCG
ACCTCCTCCCGGAGCGCTCGCTTTCATCTCCTTCCCCCGTGCCGCTCGTCCCTCCGCACT
TCACCATCGGCTCCCCGGCTGCCGATTCCCCTCAGCCGTCGCCCTCCTGGGCTCGCCGGC
GTCCATGGCGGAGAAGCTCCCCGGCTGCTAATTCCCTCGACGACGGCGGTGAGGGTGCTG
CGTCCGCCGGCAAGGACGACGAGGAACGGACGGGTCGCGGCGGCTGCTGGTGGAGCAGCG
AGAGATGGAGGGGGGGGGGGATCACTGGCTAGCTGCAGTGGCAAGGACCAGCGAGTTCGA
GGTGGAGTGCTCGCCGGTGTCCATGGTGGAGAAGTGAAGAAAGGAAGAGGGAGAGAGATG
ACGGAGGTTGACAGAAAACTGGATGGAAGTGGCATGGTTCCAATTTCCCCAAATTCTAGT
GGCACGTAGCCGATATGCTCAATAGTAGTGGCATTTTTTCGAATTGGCATATTTGCAGTG
GCATGGATCCAATTAACCCTTTTTTTTCCTCTGCTTGAAGCTTTCTAGTGTCAAGTTATC
AACAATGTTTCCAGTCATCAGCGTGCAGGTGTTAGGAGACAAGTTTCTTTTCAGTAAAAA
TATTAAATTCTACTAGTACATCTTTTGATTAGAACTGTATGTCCAGCTTGTGATGTACCT
AAGTTTTGTTAACATATGTCTGCCAATAACAGCATTAGTAATCATTATTGAAGAACTAAT
GTACGTCTTGTTTGCAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGC
TGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCACTAAAAATC
TTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGA
CCAGCTACCAGCTTTAAGGTTAGAAGAATAGAAAAAAAGTTGTAAATGGTTGTGCTTCCT
GTTGCTGTCAATGCTCAAATTGGAAGTGAGGAGACGGTAAATTTGCTCCTTGAGCTTCAA
TACAGCATTTTTCTTTTGGAGGTGCTGTCCAGAGTTTTGGAGCTCGACGGCGCCTTTTGC
CTATGGACCTATGGAAGGCAGTTCTTCAGTCTTGCCCACGGTATTTGTTGATTAATCTTG
TTCTTTAGTCTTCTTCAGAGTTCAGATTGTTTAGATTGTCTGATTTTCCACTTGCTCTTA
AGATGTATTATAGGTTAATATAGCTAGTTGGGTTTCTGTTCTGGTTTCCTTGGTTTGACA
CTATTCAGGTTACTATTCTTGATTGGTTT

consensusID : consensus_12552#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 908
fasta sequence

                              [TACAAACACCTTCGTGCATATTGTCAGCACTCTTGAATCTGGCTTAAAAGGTCTAGATACAGGGATATCAACACAGTGTGCCTCTGCCATTGATAGCTTGGCAGCCTTTTATTTCAACAATTTCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGCTCGGCATATCGGAGAGTTCCCCACTTTATTTCCTCAGATACTGAAGACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGACAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAA-GGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAANAAANNNNNNNANNAAAAA]

[+] EMBL CF310928             [TACAAACACCTTCGTGCATATTGTCAGCACTCTTGAATCTGGCTTAAAAGGTCTAGATACAGGGATATCAACACAGTGTGCCTCTGCCATTGATAGCTTGGCAGCCTTTTATTTCAACAATTTCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGCTCGGCATATCGGAGAGTTCCCCACTTTATTTCCTCAGATACTGAAGACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGACAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAAGACCAGCTGCTTTAAGGGTGGTGCACTCA                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB680848             [                                                                                                                                                             CTAAATCTTGCTCGGCATATCGGAGAGTTCCCCACTTTATTTCCTCAGATACTGAAGACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAA GGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGT                                        ]
[+] EMBL CA754052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAA GGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAANAAANNNNNNNANNAAAAA]




>consensus_12552#1
TACAAACACCTTCGTGCATATTGTCAGCACTCTTGAATCTGGCTTAAAAGGTCTAGATAC
AGGGATATCAACACAGTGTGCCTCTGCCATTGATAGCTTGGCAGCCTTTTATTTCAACAA
TTTCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGCTCGGCATATCGG
AGAGTTCCCCACTTTATTTCCTCAGATACTGAAGACACTTTTTGAGATCATCATCTTTGA
GGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGA
ACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACA
ACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAA
GAACAGAGACAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAA
CATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAAGGTGGTGCACTCATGTGCTGT
AAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTT
TAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGG
CAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGAT
TGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTA
CAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCA
GCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAANAAANNNNNNN
ANNAAAAA

consensusID : consensus_12552#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 731
fasta sequence

                              [ACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAAAAAAAGTTGTAAATGGTTGTGCTTCCTATTGCAGTCAATGCTCAAATTGAAAGTGA]

[-] EMBL CB669645             [ACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAAAAAAAGTTGTAAATGGTTGTGCTTCCTATTGCAGTCAATGCTCAAATTGAAAGTGA]
[+] EMBL CB681757             [            ATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAG                                                                  ]
[-] EMBL CF310929             [                                                                                                                                                                     GACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGACAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAAAAAAAGTTGTAAAaaaaa                                      ]




>consensus_12552#2
ACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCA
ATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTG
GCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACT
GATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATCTTACAACA
TTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGC
TTTAAGGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACC
ATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGA
AAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTG
TACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGT
GTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGT
TTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAG
GTTAGAAGAAGGGAAAAAAAGTTGTAAATGGTTGTGCTTCCTATTGCAGTCAATGCTCAA
ATTGAAAGTGA

consensusID : consensus_12552#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 694
fasta sequence

                              [GGTCTAGATACANGGATATCANCACAGTGTGCCTCTGCCATTGATAGCTTGGCGGCCTTTTATTTCAACAATATCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGCTCGGCATATTGGAGAGTTCCCCACTCTATTTCCACAGATACTGAAGACGCTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAATGGAGTCTTAGTAGGCCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTAGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCGCTAAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCAGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACATGGTGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGACTGGCGATTTATACCTTAGTGTTAATTCCAAAAAAAAA]

[-] EMBL CA759920             [GGTCTAGATACANGGATATCANCACAGTGTGCCTCTGCCATTGATAGCTTGGCGGCCTTTTATTTCAACAATATCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGCTCGGCATATTGGAGAGTTCCCCACTCTATTTCCACAGATACTGAAGACGCTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAATGGAGTCTTAGTAGGCCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTAGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCGCTAAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCAGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACATGGTGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGACTGGCGATTTATACCTTAGTGTTAATTCCAAAAAAAAA]
[-] EMBL AU077996             [                                                                                                                                                                                                                        AGTAGGCCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTAGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCAC AAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCACGTTTAAGGTGGTCGACTCATGTGCTGTAAAT CTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACGTGGTGGCAAAATGCAGTTGTTGATCaa                                                          ]




>consensus_12552#3
GGTCTAGATACANGGATATCANCACAGTGTGCCTCTGCCATTGATAGCTTGGCGGCCTTT
TATTTCAACAATATCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGCT
CGGCATATTGGAGAGTTCCCCACTCTATTTCCACAGATACTGAAGACGCTTTTTGAGATC
ATCATCTTTGAGGATGCGGGTAATCAATGGAGTCTTAGTAGGCCAATACTGAGTCTGATA
ATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTAGCATCACAGCCTGTA
GACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAAC
TTGGAACCAAAGAACAGAGATAAATTCGCTAAAAATCTTACAACATTCAGGCATGATTTC
CGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCAGCTTTAAGGTGGT
GCACTCATGTGCTGTAAATACTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGG
GGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCC
TGCTGCACATGGTGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGACTGG
CGATTTATACCTTAGTGTTAATTCCAAAAAAAAA

consensusID : consensus_12552#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 442
fasta sequence

                              [GCTGTTCAGGACCAGCTACCAGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACGTGGTGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGACTGGCGAGTGCAGGAGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCATCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGNCCTGTGATCGCTGTTTCCCTAAGTTGTTAGGGCGAAGAAGCCATCGNCAAAATATAATTCATTTGTNACA]

[+] EMBL AU082118             [GCTGTTCAGGACCAGCTACCAGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACGTGGTGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGACTGGCGAGTGCAGGAGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCATCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGNCCTGTGATCGCTGTTTCCCTAAGTTGTTAGGGCGAAGAAGCCATCGNCAAAATATAATTCATTTGTNACA]




>consensus_12552#4
GCTGTTCAGGACCAGCTACCAGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTTAG
CTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTT
TGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACGTGGTGGCAAAATGCAGT
TGTTGATCTCTTACCTTGTCGTGTACTAGACTGGCGAGTGCAGGAGATTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCATCTCTTTTTGCTTGTACAGCAATAT
TCATGTGAAAGNCCTGTGATCGCTGTTTCCCTAAGTTGTTAGGGCGAAGAAGCCATCGNC
AAAATATAATTCATTTGTNACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      CCTCACCGATCTCGCGACGATGGGTGATGTGGCCGCACCAGCTGCGGCGGCGCGGGCGGC 60
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      GAGGCCGACGAGCCCGTTGCGCCCGCCCAAGGCGATCCGCAGCACCAAGCCAAGGGGCTC 120
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      GACGAGGAGACCGTCATGGCACCATTCGTCAAGCACCTTGTCTCGGAGCCGGCCTGCTGG 180
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      GATGCGCCTGCGTCGTCGTCGTCGTTGTCGAGCGCCTCGTCTCGGAGCCGGCGAGCCAGA 240
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      CTGCGCCTGCATCGTCGTCGTCTGCTCCCCCGGCAAGGTCCCCGGCCACCGCCCCCGTGC 300
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      CGGTCGTCACCCCGCCCACCGCCGCATCGCTGTGGCCAACCCTCGCTGCCACCGCCACCG 360
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      ACCTCCTCCCGGAGCGCTCGCTTTCATCTCCTTCCCCCGTGCCGCTCGTCCCTCCGCACT 420
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      TCACCATCGGCTCCCCGGCTGCCGATTCCCCTCAGCCGTCGCCCTCCTGGGCTCGCCGGC 480
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      GTCCATGGCGGAGAAGCTCCCCGGCTGCTAATTCCCTCGACGACGGCGGTGAGGGTGCTG 540
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      CGTCCGCCGGCAAGGACGACGAGGAACGGACGGGTCGCGGCGGCTGCTGGTGGAGCAGCG 600
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ------------------------------------------------------------
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      AGAGATGGAGGGGGGGGGGGATCACTGGCTAGCTGCAGTGGCAAGGACCAGCGAGTTCGA 660
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ---------------------------------------------------------TAC 3
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      GGTGGAGTGCTCGCCGGTGTCCATGGTGGAGAAGTGAAGAAAGGAAGAGGGAGAGAGATG 720
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      AAACACCTTCGTGCATATTGTCAGCACTCTTGAATCTGGCTTAAAAGGTCTAGATACAGG 63
consensus_12552#3      ----------------------------------------------GGTCTAGATACANG 14
consensus_12552#0      ACGGAGGTTGACAGAAAACTGGATGGAAGTGGCATGGTTCCAATTTCCCCAAATTCTAGT 780
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      GATATCAACACAGTGTGC-CTCTGCCATTGATAGCTTGGCAGCCTTTTATTTCAACAATT 122
consensus_12552#3      GATATCANCACAGTGTGC-CTCTGCCATTGATAGCTTGGCGGCCTTTTATTTCAACAATA 73
consensus_12552#0      GGCACGTAGCCGATATGCTCAATAGTAGTGGCATTTTTTCGAATTGGCATATTTGCAGTG 840
                                                                                   

consensus_12552#2      ------------------------------------------------------------
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      TCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGC----TCGGCATATC 178
consensus_12552#3      TCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGC----TCGGCATATT 129
consensus_12552#0      GCATGGATCCAATTAACCCTTTTTTTTCCTCTGCTTGAAGCTTTCTAGTGTCAAGTTATC 900
                                                                                   

consensus_12552#2      --------------------------------------ACA---CTTTTTGAGATCATCA 19
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      GGAGA-GTTCCCCACTTTATTTCCTCAGATACT-GAAGACA---CTTTTTGAGATCATCA 233
consensus_12552#3      GGAGA-GTTCCCCACTCTATTTCCACAGATACT-GAAGACG---CTTTTTGAGATCATCA 184
consensus_12552#0      AACAATGTTTCCAGTCATCAGCGTGCAGGTGTTAGGAGACAAGTTTCTTTTCAGTAAAAA 960
                                                                                   

consensus_12552#2      TCTTTGAGGATGCGGGTA-ATCAGTGGAGTCTTAGTA---GACCAATACTGAGTCTGATA 75
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      TCTTTGAGGATGCGGGTA-ATCAGTGGAGTCTTAGTA---GACCAATACTGAGTCTGATA 289
consensus_12552#3      TCTTTGAGGATGCGGGTA-ATCAATGGAGTCTTAGTA---GGCCAATACTGAGTCTGATA 240
consensus_12552#0      TATTAAATTCTACTAGTACATCTTTTGATTAGAACTGTATGTCCAGCTTGTGATGTACCT 1020
                                                                                   

consensus_12552#2      ATGATCAGTGAACAGATGT---------------TTAGTAATT----TGAGAGCACAGAT 116
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ATGATCAGTGAACAGATGT---------------TTAGTAATT----TGAGAGCACAGAT 330
consensus_12552#3      ATGATCAGTGAACAGATGT---------------TTAGTAATT----TGAGAGCACAGAT 281
consensus_12552#0      AAGTTTTGTTAACATATGTCTGCCAATAACAGCATTAGTAATCATTATTGAAGAACTAAT 1080
                                                                                   

consensus_12552#2      ATTGGCATCA----CAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGC 172
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      ATTGGCATCA----CAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGC 386
consensus_12552#3      ATTAGCATCA----CAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGC 337
consensus_12552#0      GTACGTCTTGTTTGCAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGC 1140
                                                                                   

consensus_12552#2      TGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATC 232
consensus_12552#4      ------------------------------------------------------------
consensus_12552#1      TGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGACAAATTCACTCAAAATC 446
consensus_12552#3      TGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCGCTAAAAATC 397
consensus_12552#0      TGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCACTAAAAATC 1200
                                                                                   

consensus_12552#2      TTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGA 292
consensus_12552#4      -------------------------------------------------GCTGTTCAGGA 11
consensus_12552#1      TTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGA 506
consensus_12552#3      TTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGA 457
consensus_12552#0      TTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGA 1260
                                                                        ***********

consensus_12552#2      CCAGCT----GCTTTAAGGT--GGTGCACTCATGT---GCTGTAAATACTT-AGCTTAGC 342
consensus_12552#4      CCAGCTACCAGCTTTAAGGT--GGTGCACTCATGT---GCTGTAAATACTTTAGCTTAGC 66
consensus_12552#1      CCAGCT----GCTTTAAGGT--GGTGCACTCATGT---GCTGTAAATACTT-AGCTTAGC 556
consensus_12552#3      CCAGCTACCAGCTTTAAGGT--GGTGCACTCATGT---GCTGTAAATACTTTAGCTTAGC 512
consensus_12552#0      CCAGCTACCAGCTTTAAGGTTAGAAGAATAGAAAAAAAGTTGTAAATGGTTGTGCTTCCT 1320
                       ******    **********  *  * *   *      * *******  **  ****   

consensus_12552#2      TTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTT 402
consensus_12552#4      TTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTT 126
consensus_12552#1      TTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTT 616
consensus_12552#3      TTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTT 572
consensus_12552#0      GTTGCTGTC--AATGCTCAAATTGGAAGTGAGGAGACGGTAAATTTGCTCCTTGAGCTTC 1378
                        * * * *   **    **     *  * * * *     *   **  ***  *  * ** 

consensus_12552#2      GGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTG 462
consensus_12552#4      GGATTGGCTGAAAGATGAA-GGGTTCTCCTGCTGCACGTGGTGGCAAAATGCAGTTGTTG 185
consensus_12552#1      GGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTG 676
consensus_12552#3      GGATTGGCTGAAAGATGAA-GGGTTCTCCTGCTGCACATGGTGGCAAAATGCAGTTGTTG 631
consensus_12552#0      AATACAGCATTTTTCTTTTGGAGGTGCTGTCCAGAGTTTTGGAGCTCGACGGCGCCTTTT 1438
                             **       *    * * *    * * *    * *  **   * *  *   ** 

consensus_12552#2      ATCTCTTACCTTGTCGT--GTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTC 520
consensus_12552#4      ATCTCTTACCTTGTCGT--GTACTAGACTGGC-GAGTGCAGGAGATTCTTCTTCTTCTTC 242
consensus_12552#1      ATCTCTTACCTTGTCGT--GTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTC 734
consensus_12552#3      ATCTCTTACCTTGTCGT--GTACTAGACTGGCGATTTATACCTTAGTGTTAATTCCAAAA 689
consensus_12552#0      GCCTATGGACCTATGGAAGGCAGTTCTTCAGTCTTGCCCACGGTATTTGTTGATTAATCT 1498
                         ** *   * * * *   * * *      *        *    * *             

consensus_12552#2      TTCT-------------------------------------------------------- 524
consensus_12552#4      TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 302
consensus_12552#1      TTCT-------------------------------------------------------- 738
consensus_12552#3      AAAAA------------------------------------------------------- 694
consensus_12552#0      TGTTCTTTAGTCTTCTTCAG---------------------------------------- 1518
                                                                                   

consensus_12552#2      -------CTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTC 577
consensus_12552#4      TTCTTCTCTTTTTATACCTTAGTGTTAATTCCATCTCTTTTTGCTTGTACAGCAATATTC 362
consensus_12552#1      -------CTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTC 791
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      -------AGTTCAGATTGTTTAGATTGTCTGATTTTCCACTTGCTCTTAAGATGTATTAT 1571
                                                                                   

consensus_12552#2      ATGTGAAAGCC-TGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTC 636
consensus_12552#4      ATGTGAAAGNCCTGTGATCGCTGTTTCCCTAAGTTGTTAGGGCGAAGA-AGCCATCGN-C 420
consensus_12552#1      ATGTGAAAGCC-TGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTC 850
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      AGGTTAATATAGCTAGTTGGGTTTCTGTTCTGGTTTCCTTGGTTTGAC--ACTATTCAGG 1629
                                                                                   

consensus_12552#2      AAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAAAAAAAGTTGTAAATGGTTGTG 696
consensus_12552#4      AAAATATAATTCATTTGTNA-CA------------------------------------- 442
consensus_12552#1      AAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAANAAANNNNNNNANNAAAAA-- 908
consensus_12552#3      ------------------------------------------------------------
consensus_12552#0      TTACTATTCTTGATTGGTTT---------------------------------------- 1649
                                                                                   

consensus_12552#2      CTTCCTATTGCAGTCAATGCTCAAATTGAAAGTGA 731
consensus_12552#4      -----------------------------------
consensus_12552#1      -----------------------------------
consensus_12552#3      -----------------------------------
consensus_12552#0      -----------------------------------