These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12552#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1649 fasta sequence [CCTCACCGATCTCGCGACGATGGGTGATGTGGCCGCACCAGCTGCGGCGGCGCGGGCGGCGAGGCCGACGAGCCCGTTGCGCCCGCCCAAGGCGATCCGCAGCACCAAGCCAAGGGGCTCGACGAGGAGACCGTCATGGCACCATTCGTCAAGCACCTTGTCTCGGAGCCGGCCTGCTGGGATGCGCCTGCGTCGTCGTCGTCGTTGTCGAGCGCCTCGTCTCGGAGCCGGCGAGCCAGACTGCGCCTGCATCGTCGTCGTCTGCTCCCCCGGCAAGGTCCCCGGCCACCGCCCCCGTGCCGGTCGTCACCCCGCCCACCGCCGCATCGCTGTGGCCAACCCTCGCTGCCACCGCCACCGACCTCCTCCCGGAGCGCTCGCTTTCATCTCCTTCCCCCGTGCCGCTCGTCCCTCCGCACTTCACCATCGGCTCCCCGGCTGCCGATTCCCCTCAGCCGTCGCCCTCCTGGGCTCGCCGGCGTCCATGGCGGAGAAGCTCCCCGGCTGCTAATTCCCTCGACGACGGCGGTGAGGGTGCTGCGTCCGCCGGCAAGGACGACGAGGAACGGACGGGTCGCGGCGGCTGCTGGTGGAGCAGCGAGAGATGGAGGGGGGGGGGGATCACTGGCTAGCTGCAGTGGCAAGGACCAGCGAGTTCGAGGTGGAGTGCTCGCCGGTGTCCATGGTGGAGAAGTGAAGAAAGGAAGAGGGAGAGAGATGACGGAGGTTGACAGAAAACTGGATGGAAGTGGCATGGTTCCAATTTCCCCAAATTCTAGTGGCACGTAGCCGATATGCTCAATAGTAGTGGCATTTTTTCGAATTGGCATATTTGCAGTGGCATGGATCCAATTAACCCTTTTTTTTCCTCTGCTTGAAGCTTTCTAGTGTCAAGTTATCAACAATGTTTCCAGTCATCAGCGTGCAGGTGTTAGGAGACAAGTTTCTTTTCAGTAAAAATATTAAATTCTACTAGTACATCTTTTGATTAGAACTGTATGTCCAGCTTGTGATGTACCTAAGTTTTGTTAACATATGTCTGCCAATAACAGCATTAGTAATCATTATTGAAGAACTAATGTACGTCTTGTTTGCAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCACTAAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCAGCTTTAAGGTTAGAAGAATAGAAAAAAAGTTGTAAATGGTTGTGCTTCCTGTTGCTGTCAATGCTCAAATTGGAAGTGAGGAGACGGTAAATTTGCTCCTTGAGCTTCAATACAGCATTTTTCTTTTGGAGGTGCTGTCCAGAGTTTTGGAGCTCGACGGCGCCTTTTGCCTATGGACCTATGGAAGGCAGTTCTTCAGTCTTGCCCACGGTATTTGTTGATTAATCTTGTTCTTTAGTCTTCTTCAGAGTTCAGATTGTTTAGATTGTCTGATTTTCCACTTGCTCTTAAGATGTATTATAGGTTAATATAGCTAGTTGGGTTTCTGTTCTGGTTTCCTTGGTTTGACACTATTCAGGTTACTATTCTTGATTGGTTT] [+] EMBL AK071473 [CCTCACCGATCTCGCGACGATGGGTGATGTGGCCGCACCAGCTGCGGCGGCGCGGGCGGCGAGGCCGACGAGCCCGTTGCGCCCGCCCAAGGCGATCCGCAGCACCAAGCCAAGGGGCTCGACGAGGAGACCGTCATGGCACCATTCGTCAAGCACCTTGTCTCGGAGCCGGCCTGCTGGGATGCGCCTGCGTCGTCGTCGTCGTTGTCGAGCGCCTCGTCTCGGAGCCGGCGAGCCAGACTGCGCCTGCATCGTCGTCGTCTGCTCCCCCGGCAAGGTCCCCGGCCACCGCCCCCGTGCCGGTCGTCACCCCGCCCACCGCCGCATCGCTGTGGCCAACCCTCGCTGCCACCGCCACCGACCTCCTCCCGGAGCGCTCGCTTTCATCTCCTTCCCCCGTGCCGCTCGTCCCTCCGCACTTCACCATCGGCTCCCCGGCTGCCGATTCCCCTCAGCCGTCGCCCTCCTGGGCTCGCCGGCGTCCATGGCGGAGAAGCTCCCCGGCTGCTAATTCCCTCGACGACGGCGGTGAGGGTGCTGCGTCCGCCGGCAAGGACGACGAGGAACGGACGGGTCGCGGCGGCTGCTGGTGGAGCAGCGAGAGATGGAGGGGGGGGGGGATCACTGGCTAGCTGCAGTGGCAAGGACCAGCGAGTTCGAGGTGGAGTGCTCGCCGGTGTCCATGGTGGAGAAGTGAAGAAAGGAAGAGGGAGAGAGATGACGGAGGTTGACAGAAAACTGGATGGAAGTGGCATGGTTCCAATTTCCCCAAATTCTAGTGGCACGTAGCCGATATGCTCAATAGTAGTGGCATTTTTTCGAATTGGCATATTTGCAGTGGCATGGATCCAATTAACCCTTTTTTTTCCTCTGCTTGAAGCTTTCTAGTGTCAAGTTATCAACAATGTTTCCAGTCATCAGCGTGCAGGTGTTAGGAGACAAGTTTCTTTTCAGTAAAAATATTAAATTCTACTAGTACATCTTTTGATTAGAACTGTATGTCCAGCTTGTGATGTACCTAAGTTTTGTTAACATATGTCTGCCAATAACAGCATTAGTAATCATTATTGAAGAACTAATGTACGTCTTGTTTGCAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCACTAAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCAGCTTTAAGGTTAGAAGAATAGAAAAAAAGTTGTAAATGGTTGTGCTTCCTGTTGCTGTCAATGCTCAAATTGGAAGTGAGGAGACGGTAAATTTGCTCCTTGAGCTTCAATACAGCATTTTTCTTTTGGAGGTGCTGTCCAGAGTTTTGGAGCTCGACGGCGCCTTTTGCCTATGGACCTATGGAAGGCAGTTCTTCAGTCTTGCCCACGGTATTTGTTGATTAATCTTGTTCTTTAGTCTTCTTCAGAGTTCAGATTGTTTAGATTGTCTGATTTTCCACTTGCTCTTAAGATGTATTATAGGTTAATATAGCTAGTTGGGTTTCTGTTCTGGTTTCCTTGGTTTGACACTATTCAGGTTACTATTCTTGATTGGTTT] consensusID : consensus_12552#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 908 fasta sequence [TACAAACACCTTCGTGCATATTGTCAGCACTCTTGAATCTGGCTTAAAAGGTCTAGATACAGGGATATCAACACAGTGTGCCTCTGCCATTGATAGCTTGGCAGCCTTTTATTTCAACAATTTCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGCTCGGCATATCGGAGAGTTCCCCACTTTATTTCCTCAGATACTGAAGACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGACAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAA-GGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAANAAANNNNNNNANNAAAAA] [+] EMBL CF310928 [TACAAACACCTTCGTGCATATTGTCAGCACTCTTGAATCTGGCTTAAAAGGTCTAGATACAGGGATATCAACACAGTGTGCCTCTGCCATTGATAGCTTGGCAGCCTTTTATTTCAACAATTTCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGCTCGGCATATCGGAGAGTTCCCCACTTTATTTCCTCAGATACTGAAGACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGACAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAAGACCAGCTGCTTTAAGGGTGGTGCACTCA ] [-] EMBL CB680848 [ CTAAATCTTGCTCGGCATATCGGAGAGTTCCCCACTTTATTTCCTCAGATACTGAAGACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAA GGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGT ] [+] EMBL CA754052 [ TCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAA GGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAANAAANNNNNNNANNAAAAA] consensusID : consensus_12552#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 731 fasta sequence [ACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAAAAAAAGTTGTAAATGGTTGTGCTTCCTATTGCAGTCAATGCTCAAATTGAAAGTGA] [-] EMBL CB669645 [ACACTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAAAAAAAGTTGTAAATGGTTGTGCTTCCTATTGCAGTCAATGCTCAAATTGAAAGTGA] [+] EMBL CB681757 [ ATCATCATCTTTGAGGATGCGGGTAATCAGTGGAGTCTTAGTAGACCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTGGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAG ] [-] EMBL CF310929 [ GACAAGCTGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGACAAATTCACTCAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGCCTGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTCAAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAAAAAAAGTTGTAAAaaaaa ] consensusID : consensus_12552#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 694 fasta sequence [GGTCTAGATACANGGATATCANCACAGTGTGCCTCTGCCATTGATAGCTTGGCGGCCTTTTATTTCAACAATATCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGCTCGGCATATTGGAGAGTTCCCCACTCTATTTCCACAGATACTGAAGACGCTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAATGGAGTCTTAGTAGGCCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTAGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCGCTAAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCAGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACATGGTGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGACTGGCGATTTATACCTTAGTGTTAATTCCAAAAAAAAA] [-] EMBL CA759920 [GGTCTAGATACANGGATATCANCACAGTGTGCCTCTGCCATTGATAGCTTGGCGGCCTTTTATTTCAACAATATCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGCTCGGCATATTGGAGAGTTCCCCACTCTATTTCCACAGATACTGAAGACGCTTTTTGAGATCATCATCTTTGAGGATGCGGGTAATCAATGGAGTCTTAGTAGGCCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTAGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCGCTAAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCAGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACATGGTGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGACTGGCGATTTATACCTTAGTGTTAATTCCAAAAAAAAA] [-] EMBL AU077996 [ AGTAGGCCAATACTGAGTCTGATAATGATCAGTGAACAGATGTTTAGTAATTTGAGAGCACAGATATTAGCATCACAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGCTGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCAC AAAAATCTTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGACCAGCTACCACGTTTAAGGTGGTCGACTCATGTGCTGTAAAT CTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACGTGGTGGCAAAATGCAGTTGTTGATCaa ] consensusID : consensus_12552#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence [GCTGTTCAGGACCAGCTACCAGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACGTGGTGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGACTGGCGAGTGCAGGAGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCATCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGNCCTGTGATCGCTGTTTCCCTAAGTTGTTAGGGCGAAGAAGCCATCGNCAAAATATAATTCATTTGTNACA] [+] EMBL AU082118 [GCTGTTCAGGACCAGCTACCAGCTTTAAGGTGGTGCACTCATGTGCTGTAAATACTTTAGCTTAGCTTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTTGGATTGGCTGAAAGATGAAGGGTTCTCCTGCTGCACGTGGTGGCAAAATGCAGTTGTTGATCTCTTACCTTGTCGTGTACTAGACTGGCGAGTGCAGGAGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTTTTATACCTTAGTGTTAATTCCATCTCTTTTTGCTTGTACAGCAATATTCATGTGAAAGNCCTGTGATCGCTGTTTCCCTAAGTTGTTAGGGCGAAGAAGCCATCGNCAAAATATAATTCATTTGTNACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 CCTCACCGATCTCGCGACGATGGGTGATGTGGCCGCACCAGCTGCGGCGGCGCGGGCGGC 60 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 GAGGCCGACGAGCCCGTTGCGCCCGCCCAAGGCGATCCGCAGCACCAAGCCAAGGGGCTC 120 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 GACGAGGAGACCGTCATGGCACCATTCGTCAAGCACCTTGTCTCGGAGCCGGCCTGCTGG 180 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 GATGCGCCTGCGTCGTCGTCGTCGTTGTCGAGCGCCTCGTCTCGGAGCCGGCGAGCCAGA 240 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 CTGCGCCTGCATCGTCGTCGTCTGCTCCCCCGGCAAGGTCCCCGGCCACCGCCCCCGTGC 300 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 CGGTCGTCACCCCGCCCACCGCCGCATCGCTGTGGCCAACCCTCGCTGCCACCGCCACCG 360 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 ACCTCCTCCCGGAGCGCTCGCTTTCATCTCCTTCCCCCGTGCCGCTCGTCCCTCCGCACT 420 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 TCACCATCGGCTCCCCGGCTGCCGATTCCCCTCAGCCGTCGCCCTCCTGGGCTCGCCGGC 480 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 GTCCATGGCGGAGAAGCTCCCCGGCTGCTAATTCCCTCGACGACGGCGGTGAGGGTGCTG 540 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 CGTCCGCCGGCAAGGACGACGAGGAACGGACGGGTCGCGGCGGCTGCTGGTGGAGCAGCG 600 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ------------------------------------------------------------ consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 AGAGATGGAGGGGGGGGGGGATCACTGGCTAGCTGCAGTGGCAAGGACCAGCGAGTTCGA 660 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ---------------------------------------------------------TAC 3 consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 GGTGGAGTGCTCGCCGGTGTCCATGGTGGAGAAGTGAAGAAAGGAAGAGGGAGAGAGATG 720 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 AAACACCTTCGTGCATATTGTCAGCACTCTTGAATCTGGCTTAAAAGGTCTAGATACAGG 63 consensus_12552#3 ----------------------------------------------GGTCTAGATACANG 14 consensus_12552#0 ACGGAGGTTGACAGAAAACTGGATGGAAGTGGCATGGTTCCAATTTCCCCAAATTCTAGT 780 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 GATATCAACACAGTGTGC-CTCTGCCATTGATAGCTTGGCAGCCTTTTATTTCAACAATT 122 consensus_12552#3 GATATCANCACAGTGTGC-CTCTGCCATTGATAGCTTGGCGGCCTTTTATTTCAACAATA 73 consensus_12552#0 GGCACGTAGCCGATATGCTCAATAGTAGTGGCATTTTTTCGAATTGGCATATTTGCAGTG 840 consensus_12552#2 ------------------------------------------------------------ consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 TCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGC----TCGGCATATC 178 consensus_12552#3 TCACAGCTGCTGATGGCCCTCCTTCACCAGCTGCACTAAATCTTGC----TCGGCATATT 129 consensus_12552#0 GCATGGATCCAATTAACCCTTTTTTTTCCTCTGCTTGAAGCTTTCTAGTGTCAAGTTATC 900 consensus_12552#2 --------------------------------------ACA---CTTTTTGAGATCATCA 19 consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 GGAGA-GTTCCCCACTTTATTTCCTCAGATACT-GAAGACA---CTTTTTGAGATCATCA 233 consensus_12552#3 GGAGA-GTTCCCCACTCTATTTCCACAGATACT-GAAGACG---CTTTTTGAGATCATCA 184 consensus_12552#0 AACAATGTTTCCAGTCATCAGCGTGCAGGTGTTAGGAGACAAGTTTCTTTTCAGTAAAAA 960 consensus_12552#2 TCTTTGAGGATGCGGGTA-ATCAGTGGAGTCTTAGTA---GACCAATACTGAGTCTGATA 75 consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 TCTTTGAGGATGCGGGTA-ATCAGTGGAGTCTTAGTA---GACCAATACTGAGTCTGATA 289 consensus_12552#3 TCTTTGAGGATGCGGGTA-ATCAATGGAGTCTTAGTA---GGCCAATACTGAGTCTGATA 240 consensus_12552#0 TATTAAATTCTACTAGTACATCTTTTGATTAGAACTGTATGTCCAGCTTGTGATGTACCT 1020 consensus_12552#2 ATGATCAGTGAACAGATGT---------------TTAGTAATT----TGAGAGCACAGAT 116 consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ATGATCAGTGAACAGATGT---------------TTAGTAATT----TGAGAGCACAGAT 330 consensus_12552#3 ATGATCAGTGAACAGATGT---------------TTAGTAATT----TGAGAGCACAGAT 281 consensus_12552#0 AAGTTTTGTTAACATATGTCTGCCAATAACAGCATTAGTAATCATTATTGAAGAACTAAT 1080 consensus_12552#2 ATTGGCATCA----CAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGC 172 consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 ATTGGCATCA----CAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGACAAGC 386 consensus_12552#3 ATTAGCATCA----CAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGC 337 consensus_12552#0 GTACGTCTTGTTTGCAGCCTGTAGACCAGCAACAACGCCTTTCGCAATGCTTCGAGAAGC 1140 consensus_12552#2 TGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGATAAATTCACTCAAAATC 232 consensus_12552#4 ------------------------------------------------------------ consensus_12552#1 TGATGACTGATGTTGCTACGAATTTGGAACCAAAGAACAGAGACAAATTCACTCAAAATC 446 consensus_12552#3 TGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCGCTAAAAATC 397 consensus_12552#0 TGATGTCTGATGTTGCTAGGAACTTGGAACCAAAGAACAGAGATAAATTCACTAAAAATC 1200 consensus_12552#2 TTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGA 292 consensus_12552#4 -------------------------------------------------GCTGTTCAGGA 11 consensus_12552#1 TTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGA 506 consensus_12552#3 TTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGA 457 consensus_12552#0 TTACAACATTCAGGCATGATTTCCGTGTGAAGAACATTCAGGCATGACAGCTGTTCAGGA 1260 *********** consensus_12552#2 CCAGCT----GCTTTAAGGT--GGTGCACTCATGT---GCTGTAAATACTT-AGCTTAGC 342 consensus_12552#4 CCAGCTACCAGCTTTAAGGT--GGTGCACTCATGT---GCTGTAAATACTTTAGCTTAGC 66 consensus_12552#1 CCAGCT----GCTTTAAGGT--GGTGCACTCATGT---GCTGTAAATACTT-AGCTTAGC 556 consensus_12552#3 CCAGCTACCAGCTTTAAGGT--GGTGCACTCATGT---GCTGTAAATACTTTAGCTTAGC 512 consensus_12552#0 CCAGCTACCAGCTTTAAGGTTAGAAGAATAGAAAAAAAGTTGTAAATGGTTGTGCTTCCT 1320 ****** ********** * * * * * ******* ** **** consensus_12552#2 TTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTT 402 consensus_12552#4 TTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTT 126 consensus_12552#1 TTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTT 616 consensus_12552#3 TTCGTTTTAGGAACCACCATTCCCGTGGGGGGAAAGTTATGGTTTAACTCAGTTTGGTTT 572 consensus_12552#0 GTTGCTGTC--AATGCTCAAATTGGAAGTGAGGAGACGGTAAATTTGCTCCTTGAGCTTC 1378 * * * * ** ** * * * * * * ** *** * * ** consensus_12552#2 GGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTG 462 consensus_12552#4 GGATTGGCTGAAAGATGAA-GGGTTCTCCTGCTGCACGTGGTGGCAAAATGCAGTTGTTG 185 consensus_12552#1 GGATTGGCTGAAAGATGAAAGGGTTCTCCTGCTGCATGTGGCGGCAAAATGCAGTTGTTG 676 consensus_12552#3 GGATTGGCTGAAAGATGAA-GGGTTCTCCTGCTGCACATGGTGGCAAAATGCAGTTGTTG 631 consensus_12552#0 AATACAGCATTTTTCTTTTGGAGGTGCTGTCCAGAGTTTTGGAGCTCGACGGCGCCTTTT 1438 ** * * * * * * * * * ** * * * ** consensus_12552#2 ATCTCTTACCTTGTCGT--GTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTC 520 consensus_12552#4 ATCTCTTACCTTGTCGT--GTACTAGACTGGC-GAGTGCAGGAGATTCTTCTTCTTCTTC 242 consensus_12552#1 ATCTCTTACCTTGTCGT--GTACTAGAATGGCTGAGTGCAGGGGATTGACTTTTTTCTTC 734 consensus_12552#3 ATCTCTTACCTTGTCGT--GTACTAGACTGGCGATTTATACCTTAGTGTTAATTCCAAAA 689 consensus_12552#0 GCCTATGGACCTATGGAAGGCAGTTCTTCAGTCTTGCCCACGGTATTTGTTGATTAATCT 1498 ** * * * * * * * * * * * * consensus_12552#2 TTCT-------------------------------------------------------- 524 consensus_12552#4 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 302 consensus_12552#1 TTCT-------------------------------------------------------- 738 consensus_12552#3 AAAAA------------------------------------------------------- 694 consensus_12552#0 TGTTCTTTAGTCTTCTTCAG---------------------------------------- 1518 consensus_12552#2 -------CTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTC 577 consensus_12552#4 TTCTTCTCTTTTTATACCTTAGTGTTAATTCCATCTCTTTTTGCTTGTACAGCAATATTC 362 consensus_12552#1 -------CTTTTTATACCTTAGTGTTAATTCCTTCTCTTTTTGCTTGTACAGCAATATTC 791 consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 -------AGTTCAGATTGTTTAGATTGTCTGATTTTCCACTTGCTCTTAAGATGTATTAT 1571 consensus_12552#2 ATGTGAAAGCC-TGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTC 636 consensus_12552#4 ATGTGAAAGNCCTGTGATCGCTGTTTCCCTAAGTTGTTAGGGCGAAGA-AGCCATCGN-C 420 consensus_12552#1 ATGTGAAAGCC-TGTGATCGCTGTTTCCCCGAGTTGTTAGGGGGAAAGCAGCCATCGCTC 850 consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 AGGTTAATATAGCTAGTTGGGTTTCTGTTCTGGTTTCCTTGGTTTGAC--ACTATTCAGG 1629 consensus_12552#2 AAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAAAAAAAGTTGTAAATGGTTGTG 696 consensus_12552#4 AAAATATAATTCATTTGTNA-CA------------------------------------- 442 consensus_12552#1 AAAATATAATTCATTCGTTAACAGGTTAGAAGAAGGGAANAAANNNNNNNANNAAAAA-- 908 consensus_12552#3 ------------------------------------------------------------ consensus_12552#0 TTACTATTCTTGATTGGTTT---------------------------------------- 1649 consensus_12552#2 CTTCCTATTGCAGTCAATGCTCAAATTGAAAGTGA 731 consensus_12552#4 ----------------------------------- consensus_12552#1 ----------------------------------- consensus_12552#3 ----------------------------------- consensus_12552#0 ----------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||