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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12556#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2403 fasta sequence
[ACTGCTACCTCTCACGTCTCACCCACACCTACCCAATCTCCCGGTGCGCAGCGGCGAGCGACATGGAGCTCCGCGAGCTCGGCGCCACGGGCCTCCGCGTCAGCCCCGTCGGCTTCGGCGCCTCCCCTCTCGGCCATGTCTTCGGCGACGTCCCCCGCGACGTCGCCCGCGCCGCCGTCCGCCGCGCCCTCGACCTCGGCATCAACTTCTTCGACACCTCCCCGTACTACGGCGGCACGGTGTCGGAGTCGGTGCTCGGGGACTGCCTCCGCGCCGCGGGCGTGCCGCGGGACCGGTTCGTGGTCGCCACCAAGTGCGGGCGCTACAGGGAAGGGTTCGACTTCAGCGCCGCCCGCGTCACCCGCAGCGTCGACGAGAGCCTCGCACGCCTCGGCCTCGACTACGTCGACATCCTCCACTGCCACGACATCGAGTTCACCGACCTCGACCAGATTGTGAATGAGACGATTCCGGTGCTCCAGAAGATCAAGGAGAGCGGGAAGGCGCGGTTCATCGGGATAACCGGGCTGCCATTGAGCATCTACACTTATGTGCTCGACCAGGTGCCGCCAGGTTCTGTGGATGTGATTCTGTCTTACTGCCACTATGGGATCAATGATACCGCGCTTGTGGATTTGCTTCCCTACCTGAAGAGCAAAGGTGTTGGCGTGATCAGTGCTTCACCTCTTGCAATGGGGCTTCTTACAGATAACGGGCCACCCGAATGGCACCCTGCACCGAAAGAACTAAAGTTGGCATGCAGGGCAGCAGCAGATCACTGTAAGAAGAAGGGGAAAAACATTACAAAGCTAGCTATGCAGTACAGCTTGATGAACAATGAGATTTCCACGGTTCTTGTTGGAATGAACTCTCCAGAACAGGTAGAGGAGAATGTGGCTGCTGCAATTGAATTGTCTACTTCCGGTATTGATAAAGAACTTCTGCACGAAGTTGAAGCAATTCTTGAG-CCTGTCAAGAACATGACCTGGT-CCAGTGGCATTGAG-CAAGCCTGAT-ATCTGGCAG-CAGCCTGGCTCATTATAATTCATTC-ATGTATTCATTGAGTCAATTGTTTGCATTGCAATATTTCAATGGTGAGCAAAGGAAAGTCATCATCGGAAATTCGTTGGTATGTTGTCTGTATCAATTTAGAAGTCTGTGAATAGACAAACAGCCAAACATGGATGCTGATAATAATGGAATAAGTTGTGCCCATGCACCTTGCTGTAATGAGGCTTGTATATT-GCTTCAACTACAAACTGTACCAAAAAACAAATTGCAAACCAATAATTTGCCGATGCAAAAGGAAATATCACAAATTCTGTATACAAGCTTAATGCTGTCTCACAGTGGATCAAATTTTATGCTTGCATAATTCCATCCTACCAATGCTGGAAACCTCCTCTCTATAACTAATCATCTAATCATACAGAAGCTCAAAATTATACCGAGTGTGAAGTTGACAACTTGACACCATTCTCCATACTCCATAGCCTAAGGAGACTTCACCGGCCGGCCATGGCCGCCGAGCCCGACGACCCCCTCCACCGCCGAGATGATCTGCGGCACCGACATCCCGCCGGAGAGGACGATCTCGATGGCCTCGCGGACGGAGAGGTCGGGGACGATGACGTCGGCGCGGCTCATGAGGAAGATGTCGCCGAGGTAGAGGTTGTTCGTCGGCACGTACACGCAGGCGAGCTCCCGGCCGCCGCCGGCGCCACTGCCTCCGCCGCGGCGGCCGTCGGCGACGCCGCGCAGCGTCAGCGTCGACGTGATGAATCCCAGCGCGTACTCGCCTATCCTCGGGTGACGTATGATCACCACCTCCTTGAACGCCCGTGAGCTCTGGTCTGAATTGAGCACGAAATCAATCTGGTGAGATTGCAGCGCTGATTTGCTTCGAAGAAGAGTAGATGTGCCGAACCAGCGGCGTCTTCTTGATGAAGAGCTCGCCGAGGCCGAGAAGAGATGCTCCCAGCCACGACGACATGAACACGCCGGCGAGGAAGATGAAGGTGATCGACGTCGCAAACCCCAAACCGAAGACATTGATGCCGAGATGGATGTAGATCGGGGAGAAGAAGCCGTCGACGACGCGGATGAACCACCAGGTGGTGTAGAATGTGATGGCAATGGGGAGCAAGATGACACATCCAGTCATGAACTTCTTCCATGCCCAGCTGCGTATCACCCTTGAAAATGCCTCACCTCGATGCCGGTACGGTGGCGGTGGATATGGTGGCCGCGCGCCGACGACGGCAGCGGCGGCGGCGAGCCGGCCGCCACGATCCCTACCGGCAGCAGCGACGACGTCTCCTCCTCGTGGCCTCCGGCGGCAACAGCGGCGGCGGCGCGGTCGGCTGCCACCGGGATGAGCAGCAGCTGATCCTTGTCCCGGTCCCT]
[+] EMBL AK060431 [ACTGCTACCTCTCACGTCTCACCCACACCTACCCAATCTCCCGGTGCGCAGCGGCGAGCGACATGGAGCTCCGCGAGCTCGGCGCCACGGGCCTCCGCGTCAGCCCCGTCGGCTTCGGCGCCTCCCCTCTCGGCCATGTCTTCGGCGACGTCCCCCGCGACGTCGCCCGCGCCGCCGTCCGCCGCGCCCTCGACCTCGGCATCAACTTCTTCGACACCTCCCCGTACTACGGCGGCACGGTGTCGGAGTCGGTGCTCGGGGACTGCCTCCGCGCCGCGGGCGTGCCGCGGGACCGGTTCGTGGTCGCCACCAAGTGCGGGCGCTACAGGGAAGGGTTCGACTTCAGCGCCGCCCGCGTCACCCGCAGCGTCGACGAGAGCCTCGCACGCCTCGGCCTCGACTACGTCGACATCCTCCACTGCCACGACATCGAGTTCACCGACCTCGACCAGATTGTGAATGAGACGATTCCGGTGCTCCAGAAGATCAAGGAGAGCGGGAAGGCGCGGTTCATCGGGATAACCGGGCTGCCATTGAGCATCTACACTTATGTGCTCGACCAGGTGCCGCCAGGTTCTGTGGATGTGATTCTGTCTTACTGCCACTATGGGATCAATGATACCGCGCTTGTGGATTTGCTTCCCTACCTGAAGAGCAAAGGTGTTGGCGTGATCAGTGCTTCACCTCTTGCAATGGGGCTTCTTACAGATAACGGGCCACCCGAATGGCACCCTGCACCGAAAGAACTAAAGTTGGCATGCAGGGCAGCAGCAGATCACTGTAAGAAGAAGGGGAAAAACATTACAAAGCTAGCTATGCAGTACAGCTTGATGAACAATGAGATTTCCACGGTTCTTGTTGGAATGAACTCTCCAGAACAGGTAGAGGAGAATGTGGCTGCTGCAATTGAATTGTCTACTTCCGGTATTGATAAAGAACTTCTGCACGAAGTTGAAGCAATTCTTGAG CCTGTCAAGAACATGACCTGGT CCAGTGGCATTGAG CAAGCCTGAT ATCTGGCAG CAGCCTGGCTCATTATAATTCATTC ATGTATTCATTGAGTCAATTGTTTGCATTGCAATATTTCAATGGTGAGCAAAGGAAAGTCATCATCGGAAATTCGTTGGTATGTTGTCTGTATCAATTTAGAAGTCTGTGAATAGACAAACAGCCAAACATGGATGCTGATAATAATGGAATAAGTTGTGCCCATGC ]
[+] EMBL AK067039 [ GTCTCACCCACACCTACCCAATCTCCCGGTGCGCAGCGGCGAGCGACATGGAGCTCCGCGAGCTCGGCGCCACGGGCCTCCGCGTCAGCCCCGTCGGCTTCGGCGCCTCCCCTCTCGGCCATGTCTTCGGCGACGTCCCCCGCGACGTCGCCCGCGCCGCCGTCCGCCGCGCCCTCGACCTCGGCATCAACTTCTTCGACACCTCCCCGTACTACGGCGGCACGGTGTCGGAGTCGGTGCTCGGGGACTGCCTCCGCGCCGCGGGCGTGCCGCGGGACCGGTTCGTGGTCGCCACCAAGTGCGGGCGCTACAGGGAAGGGTTCGACTTCAGCGCCGCCCGCGTCACCCGCAGCGTCGACGAGAGCCTCGCACGCCTCGGCCTCGACTACGTCGACATCCTCCACTGCCACGACATCGAGTTCACCGACCTCGACCAGATTGTGAATGAGACGATTCCGGTGCTCCAGAAGATCAAGGAGAGCGGGAAGGCGCGGTTCATCGGGATAACCGGGCTGCCATTGAGCATCTACACTTATGTGCTCGACCAGGTGCCGCCAGGTTCTGTGGATGTGATTCTGTCTTACTGCCACTATGGGATCAATGATACCGCGCTTGTGGATTTGCTTCCCTACCTGAAGAGCAAAGGTGTTGGCGTGATCAGTGCTTCACCTCTTGCAATGGGGCTTCTTACAGATAACGGGCCACCCGAATGGCACCCTGCACCGAAAGAACTAAAGTTGGCATGCAGGGCAGCAGCAGATCACTGTAAGAAGAAAGGGAAAAACATTACAAAGCTAGCTATGCAGTACAGCTTGATGAACAATGAGATTTCCACGGTTCTTGTTGGAATGAACTCTCCAGAACAGGTAGAGGAGAATGTGGCTGCTGCAATTGAATTGTCTACTTCCGGTATTGATAAAGAACTTCTGCACGAAGTTGAAGCAATTCTTGAG CCTGTCAAGAACATGACCTGGT CCAGTGGCATTGAG CAAGCCTGAT ATCTGGCAG CAGCCTGGCTCATTATAATTCATTC ATGTATTCATTGAGTCAATTGTTTGCATTGCAATATTTCAATGGTGAGCAAAGGAAAGTCATCATCGGAAATTCGTTGGTATGTTGTCTGTATCAATTTAGAAGTCTGTGAATAGACAAACAGCCAAACATGGATGCTGATAATAATGGAATAAGTTGTGCCCATGCACCTTGCTGTAATGAGGCTTGTATATT GCTTCAACTACAAACTGTACCAAAAAACAAATTGCAAACCAATAATTTGCCGATGCAAA ]
[+] EMBL AU077824 [ CACCCACACCTACCCAATCTCCCGGTGCGCA CGGCGAGCGACATGGAGCTCCGCGAGCTCGGCGCCACGGGCCTCCGCGTCAGCCCCGTCGGCTTCGGCGCCTCCCCTCTCGGCCATGTCTTCGGCGACGTCCCCCGCGACGTCGCCCGCGCCGCCGTCCGCCGCGCCCTCGACCTCGGCATCAACTTCTTCGACACCTCCCCGTACTACGGCGGCACGGTGTCGGAGTCGGTGCTCGGGGACTGCCTCCGCGCCGC GGCGTGCCGCGGGACCGGTTCGTGGTCGCCACCAAGTGCGGGCGCTACAGGGAAGGGTTCGACTTCAGCGCCGCCCGCGTCACCCGCAGCGTCGACGAGAG CTCGCACG CTCGGCCTCGACTACGTCGACAT CTCCACTGCCACGACATCGAGTTCAACGAACTCGAACANATTGTGAATGAGAAGATTCn ]
[+] EMBL CB618586 [ AATCTCCCGGTGCGCAGCGGCGAGCGACATGGAGCTCCGCGAGCTCGGCGCCACGGGCCTCCGCGTCAGCCCCGTCGGCTTCGGCGCCTCCCCTCTCGGCCATGTCTTCGGCGACGTCCCCCGCGACGTCGCCCGCGCCGCCGTCCGCCGCGCCCTCGACCTCGGCATCAACTTCTTCGACACCTCCCCGTACTACGGCGGCACGGTGTCGGAGTCGGTGCTCGGGGACTGCCTCCGCGCCGCGGGCGTGCCGCGGGACCGGTTCGTGGTCGCCACCAAGTGCGGGCGCTACAGGGAAGGGTTCGACTTCAGCGCCGCCCGCGTCACCCGCAGCGTCGACGAGAGCCTCGCACGCCTCGGCCTCGACTACGTCGACATCCTCCACTGCCACGACATCGAGTTCACCGACCTCGACCAGATTGTGAATGAGACGATTCCGGTGCTCCAGAAGATCAAGGAGAGCGGGAAGGCGCGGTTCATCGGGATAACCGGGCTGCCATTGAGCATCTACACTTATGTGCTCGACCGGGTGCCGCCAGGTTCTGTGGATGTGATTCTGTCTTACTGCCACTATGGGATCAATGATACCGCGCTTGTGGATTTGCTTCCCTACCTGAAGAGCAAAGGTGTTGGTGTGATCAGTGCTTCACCTCTTGCAATGGGGCTTCTTACAGATAACGGGCCACCCGAATGGCACCCTGCACCGAAAGAACTAAAGTTGGCATGCAGCGCAGCAGCAGATCACTGTAAGAAGAAAGGGAAAAACATTACAAAGCTAGCTATGCAGTACA ]
[+] EMBL CB618659 [ AATCTCCCGGTGCGCAGCGGCGAGCGACATGGAGCTCCGCGAGCTCGGCGCCACGGGCCTCCGCGTCAGCCCCGTCGGCTTCGGCGCCTCCCCTCTCGGCCATGTCTTCGGCGACGTCCCCCGCGACGTCGCCCGCGCCGCCGTCCGCCGCGCCCTCGACCTCGGCATCAACTTCTTCGACACCTCCCCGTACTACGGCGGCACGGTGTCGGAGTCGGTGCTCGGGGACTGCCTCCGCGCCGCGGGCGTGCCGCGGGACCGGTTCGTGGTCGCCACCAAGTGCGGGCGCTACAGGGAAGGGTTCGACTTCAGCGCCGCCCGCGTCACCCGCAGCGTCGACGAGAGCCTCGCACGCCTCGGCCTCGACTACGTCGACATCCTCCACTGCCACGACATCGAGTTCACCGACCTCGACCAGATTGTGAATGAGACGATTCCGGTGCTCCAGAAGATCAAGGAGAGCGGGAAGGCGCGGTTCATCGGGATAACCGGGCTGCCATTGAGCATCTACACTTATGTGCTCGACCGGGTGCCGCCAGGTTCTGTGGATGTGATTCTGTCTTACTGCCACTATGGGATCAATGATACCGCGCTTGTGGATTTGCTTCCCTACCTGAAGAGCAAAGGTGTTGGTGTGATCAGTGCTTCAACTCTTGCAATGGGGCTTCT ]
[+] EMBL AK102223 [ TCCCGGTGCGCAGCGGCGAGCGACATGGAGCTCCGCGAGCTCGGCGCCACGGGCCTCCGCGTCAGCCCCGTCGGCTTCGGCGCCTCCCCTCTCGGCCATGTCTTCGGCGACGTCCCCCGCGACGTCGCCCGCGCCGCCGTCCGCCGCGCCCTCGACCTCGGCATCAACTTCTTCGACACATCCCCGTACTACGGCGGCACGGTGTCGGAGTCGGTGCTCGGGGACTGCCTCCGCGCCGCGGGCGTGCCGCGGGACCGGTTCGTGGTCGCCACCAAGTGCGGGCGCTACAGGGAAGGGTTCGACTTCAGCGCCGCCCGCGTCACCCGCAGCGTCGACGAGAGCCTCGCACGCCTCGGCCTCGACTACGTCGACATCCTCCACTGCCACGACATCGAGTTCACCGACCTCGACCAGATTGTGAATGAGACGATTCCGGTGCTCCAGAAGATCAAGGAGAGCGGGAAGGCGCGGTTCATCGGGATAACCGGGCTGCCATTGAGCATCTACACTTATGTGCTCGACCAGGTGCCGCCAGGTTCTGTGGATGTGATTCTGTCTTACTGCCACTATGGGATCAATGATACCGCGCTTGTGGATTTGCTTCCCTACCTGAAGAGCAAAGGTGTTGGCGTGATCAGTGTTTCACCTCTTGCAATGGGGCTTCTTACAGATAACGGGCCACCCGAATGGCACCCTGCACCGAAAGAACTAAAGTTGGCATGCAGGGCAGCAGCAGATCACTGTAAGAAGAAGGGGAAAAACATTACAAAGCTAGCTATGCAGTACAGCTTGATGAACAATGAGATTTCCACGGTTCTTGTTGGAATGAACTCTCCAGAACAGGTAGAGGAGAATGTGGCTGCTGCAATTGAATTGTCTACTTCCGGTATTGATAAAGAACTTCTGCACGAAGTTGAAGCAATTCTTGAG CCTGTCAAGAACATGACCTGGT CCAGTGGCATTGAG CAAGCCTGAT ATCTGGCAG CAGCCTGGCTCATTATAATTCATTC ATGTATTCATTGAGTCAATTGTTTGCATTGCAATATTTCAATGGTGAGCAAAGGAAAGTCATCATCGGAAATTCGTTGGTATGTTGTCTGTATCAATTTAGAAGTCTGTGAATAGACAAACAGCCAAACATGGATGCTGATAATAATGGAATAAGTTGTGCCCATGCACCTTGCTGTAATGAGGCTTGTATATT GCTTCAACTACAAACTGTACCAAAAAACAAATTGCAAACCAATAATTTGCCG ]
[+] EMBL CA767215 [ AAGGGGAGCGGGAAGGCGCGGTTCATCGGGATAACCGGGCTGCCATTGAGCATCTACACTTATGTGCTCGACCGGGTGCCGCCAGGTTCTGTGGATGTGATTCTGTCTTACTGCCACTATGGGATCAATGATACCGCGCTTGTGGATTTGCTTCCCTACCTGAAGAGCAAAGGTGTTGGCGTGATCAGTGCTTCACCTCTTGCAATGGGGCTTCTTACAGATAACGGGCCACCCGAATGGCACCCTGCACCGAAAGAACTAAAGTTGGCATGCAGGGCAGCAGCAGATCACTGTAAGAAGAAGGGGAAAAACATTACAAAGCTAGCTATGCAGTACAGCTTGATGAACAATGAGATTTCCACGGTTCTTGTTGGAATGAACTCTCCAGAACAGGTAGAGGAGAATGTGGCTGCTGCAATTGAATTGTCTACTTCCGGTATTGATAAAGAACTTCTGCACGAAGTTGAAGCAATTCTTGAG CCTGTCAAGAACATGACCTGGT CCAGTGGCATTGAG CAAGCCTGAT ATCTGGCAG CAGCCTGGCTCATTAAAATTCATTCTATGTATTCATTGAGTCAATTGTTTGCATTGCAATATTTCAATGGTGAGCAAAGGAAAGTCATCATCGGAAGTTCGTTGGTATGTTGTCTGTACCAATTTAGAAGTCTGTGAATAGACAAACAGCCAAACATGGATGCTGATAATAATGGAATAAGTTGTGCCCATGCACCTTGCTGTAATGANGCTTGNATATTGGCTTCAATTACAAACTGTACC AAACAAATTGCACACCAATAATTTGCTGATGC AACGGNAATATCACAAATTCTGT ]
[+] EMBL AU077825 [ ttAGAAGAAGGGGGAAAACATTACCAAGCTAGCTATGCAGTACCGCTTGATGAACAATGAGATTTCCACGGTNCTTGTTGGAATGAACTCTCCAGAACAGGTAGAGGAGAATGTGGCTGCTGCAATTGAATTGTCTACTTCCGGTATTGATAAAGAACTTCTGCACGAAGTTGAAGCAATTCTTGAG CCTGTCAAGAACATGACCTGGT CCAGTGGCATTGAG CAAGCCTGAT ATCTGGCAG CAGCCTGGCTCATTATAATTCATTC ATGTATTCATTGAGTCAATTGTTTGCATTGCAATATTTCAATGGTGAGCAAAGGAAAGTCATCATCGGAAATTCGTTGGTATGTTGTCTGTATCAATTTAGAAGTCTGTGAATAGACAAACAGCCAAACATGGATGCTGATAATAATGGAATAAGTTGTGCCCATGCACCTTGCTGTAATGAGGCTTGTATATT GCTTCAACTACAAACTGTACCAAAAAACAAATTGCAAACCAATAATTTGCCGATGCAAAAGGAAAaaa ]
[+] EMBL AU082719 [ GAGNCCTGTCAAGAACATGACCTGGTCCCAGTGGCATTGAGCCAAGCCTGATAATCTGGCAGTCAGCCTGGCTCATTATAATTCATTC ATGTATTCATTGAGTCAATTGTTTGCATTGCAATATTTCAATGGTGAGCAAAGGAAAGTCATCATCGGAAATTCGTTGGTATGTTGTCTGTATCAATTTAGAAGTCTGTGAATAGACAAACAGCCAAACATGGATGCTGATAATAATGGAATAAGTTGTGCCCATGCACCTTGCTGTAATGAGGCTTGTATATT GCTTCAACTACAAACTGTACCAAAAAACAAATTGCAAACCAATAATTTGCCGATGCAAAAGGAAATATCACAAAaaaaa ]
[-] EMBL AK069386 [ GGCTTGTATATT GCTTCAACTACAAACTGTACCAAAAAACAAATTGCAAACCAATAATTTGCCGATGCAAAAGGAAATATCACAAATTCTGTATACAAGCTTAATGCTGTCTCACAGTGGATCAAATTTTATGCTTGCATAATTCCATCCTACCAATGCTGGAAACCTCCTCTCTATAACTAATCATCTAATCATACAGAAGCTCAAAATTATACCGAGTGTGAAGTTGACAACTTGACACCATTCTCCATACTCCATAGCCTAAGGAGACTTCACCGGCCGGCCATGGCCGCCGAGCCCGACGACCCCCTCCACCGCCGAGATGATCTGCGGCACCGACATCCCGCCGGAGAGGACGATCTCGATGGCCTCGCGGACGGAGAGGTCGGGGACGATGACGTCGGCGCGGCTCATGAGGAAGATGTCGCCGAGGTAGAGGTTGTTCGTCGGCACGTACACGCAGGCGAGCTCCCGGCCGCCGCCGGCGCCACTGCCTCCGCCGCGGCGGCCGTCGGCGACGCCGCGCAGCGTCAGCGTCGACGTGATGAATCCCAGCGCGTACTCGCCTATCCTCGGGTGACGTATGATCACCACCTCCTTGAACGCCCGTGAGCTCTGGTCTGAATTGAGCACGAAATCAATCTGGTGAGATTGCAGCGCTGATTTGCTTCGAAGAAGAGTAGATGTGCCGAACCAGCGGCGTCTTCTTGATGAAGAGCTCGCCGAGGCCGAGAAGAGATGCTCCCAGCCACGACGACATGAACACGCCGGCGAGGAAGATGAAGGTGATCGACGTCGCAAACCCCAAACCGAAGACATTGATGCCGAGATGGATGTAGATCGGGGAGAAGAAGCCGTCGACGACGCGGATGAACCACCAGGTGGTGTAGAATGTGATGGCAATGGGGAGCAAGATGACACATCCAGTCATGAACTTCTTCCATGCCCAGCTGCGTATCACCCTTGAAAATGCCTCACCTCGATGCCGGTACGGTGGCGGTGGATATGGTGGCCGCGCGCCGACGACGGCAGCGGCGGCGGCGAGCCGGCCGCCACGATCCCTACCGGCAGCAGCGACGACGTCTCCTCCTCGTGGCCTCCGGCGGCAACAGCGGCGGCGGCGCGGTCGGCTGCCACCGGGATGAGCAGCAGCTGATCCTTGTCCCGGTCCCT]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||