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Oryza sativa
cluster # 12564 cluster # 12564       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12564#0 length = 1161 sequences # 5  
consensus_12564#1 length = 592 sequences # 3  
consensus_12564#2 length = 497 sequences # 1  
consensus_12564#3 length = 188 sequences # 1  

consensusID : consensus_12564#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1161
fasta sequence
                              [ACACGTTGCAACTGCGACTAGTCGATCTCATCGATCTCTCAAAAGACTACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCCAAGCGGAAGCGGAGGGATGCAGGGGACAACGACGACCAAGGCCGGGCGCAACGGCGACCGCGCCGGCACCGAAGCCCCGGGCGCGACGAGGGCGACTGACGGCAAGGTCGGGCGTGGAGGCCAAGGACTCGCTGACCATCGTCGCGCTGCAGTCGCCGGTCACCGTCGAGCGCCCCGTCCGCGGCGACCTCGAGGAACACGTCCCCAAGCCATATCTTGCGAGAGCGCTGGCGGCGCCGGACATCTACCACCCAGACGGAACCACGACGGACGATCACGAGCACCACCACCTCAGCGTGCTGCAGCAGCACGTCGCCTTCTTCGACCGCGACGACAACGGCATCATCTACCCATGGGAAACCTACGAAGGGTGCCGTGCGCTTGGGTTCAACATGATCATGTCCTTCCTCATTGCTCTGG-TCGTGAACGTGT-CCATG-AGCTACCCCACGCTGCCTGGCTGGCTGCCGTCCCCGTTCTT-CCCGATCTACAT-CCACAACAT-CCACAGGAGTAAG-CACGGGAGTGACTCTGGGACCTACGATAACGAGGGCCGGTTCATGCCGGTGAACTTCGAGAACATCTTCAGCAAGTACGCGCGCACGTCCCCTGACAGGCTCACCTACAGGGAGGTGTGGC-AGATGACCGAGGGGAACCGCG-AAGTGCTCGATCTCTTCGGATGGTTCGCGGCGAAGCTGG-AGTGGACGATCCTGTACGTGCTGGCGAGGGACGAGGAAGGGTACCTGGCGAGGGAGGCCATCCGGCGCATGTACGACGGGAGCCTGTTCGAGTACGTGGCGATGCAGCG-GGAGCAGCACGC-TAAGA-TGTCCTAGA-TTAGC-TTAG-TTAGCTACTGGATC-GGTCTGTGGGTGTGAGATCGAGCCTGTGACGCAGGGGACATGCAACGGTGCTCTGCCTGCCGGCTTAGGTCTGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGCGTGTCGTGTCTGCTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTGTGGAGGATGCGATATGCGCGAATAA-----AAAAAAAA]

[+] EMBL AK063625             [ACACGTTGCAACTGCGACTAGTCGATCTCATCGATCTCTCAAAAGACTACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCCAAGCGGAAGCGGAGGGATGCAGGGGACAACGACGACCAAGGCCGGGCGCAACGGCGACCGCGCCGGCACCGAAGCCCCGGGCGCGACGAGGGCGACTGACGGCAAGGTCGGGCGTGGAGGCCAAGGACTCGCTGACCATCGTCGCGCTGCAGTCGCCGGTCACCGTCGAGCGCCCCGTCCGCGGCGACCTCGAGGAACACGTCCCCAAGCCATATCTTGCGAGAGCGCTGGCGGCGCCGGACATCTACCACCCAGACGGAACCACGACGGACGATCACGAGCACCACCACCTCAGCGTGCTGCAGCAGCACGTCGCCTTCTTCGACCGCGACGACAACGGCATCATCTACCCATGGGAAACCTACGAAGGGTGCCGTGCGCTTGGGTTCAACATGATCATGTCCTTCCTCATTGCTCTGG TCGTGAACGTGT CCATG AGCTACCCCACGCTGCCTGGCTGGCTGCCGTCCCCGTTCTT CCCGATCTACAT CCACAACAT CCACAGGAGTAAG CACGGGAGTGACTCTGGGACCTACGATAACGAGGGCCGGTTCATGCCGGTGAACTTCGAGAACATCTTCAGCAAGTACGCGCGCACGTCCCCTGACAGGCTCACCTACAGGGAGGTGTGGC AGATGACCGAGGGGAACCGCG AAGTGCTCGATCTCTTCGGATGGTTCGCGGCGAAGCTGG AGTGGACGATCCTGTACGTGCTGGCGAGGGACGAGGAAGGGTACCTGGCGAGGGAGGCCATCCGGCGCATGTACGACGGGAGCCTGTTCGAGTACGTGGCGATGCAGCG GGAGCAGCACGC TAAGA TGTCCTAGA TTAGC TTAG TTAGCTACTGGATC GGTCTGTGGGTGTGAGATCGAGCCTGTGACGCAGGGGACATGCAACGGTGCTCTGCCTGCCGGCTTAGGTCTGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGCGTGTCGTGTCTGCTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTGTGG                                   ]
[+] EMBL C97363               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            atcCATGTCCTTCCTCATTGCTCTGGTTCTTGAACTTTTCCCATGAAGCTACCCCACGCTGCCTGGCTGGCTGCCTCCCCCTTTCTTCCCCGATCTACATCCCACAACATCCCACAGGANTAAGCCACGGGAGTGACTCTGGGACCTACGATAACGAGGGCCGGTTCATNCCGGTGAACTTCGAGAACATCTTCAGCAAGTACGCGCGCACGTCCCCTGACAGGCTCA CTACAGGGAGGTGTGGC AGATGACCGAGGGGAACCGCG AAGTGCTCGATCTCTTCGGATGGTTCGCGGCGAAGCTGG AGTGGACGATCCTGTACGTGCTGGCGAGGGACGAGGAAGGGTACCTGGCGAGGGAGGCCATCCGGCGCATGTACGACGGGAGCCTGTTCGAGTACGTGGCGATGCAGCG GGAGCAGCACGC TAAGA TGTCCTAGA TTAGC TTAG TTAGCTACTGGATC GGTCTGTGGGTGTGAGATCGAGCCTGTGACGCAGGGGACATGCAACGGTGCTCTGCCTGCCGGCTTAGGTCTGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGCGTGTCGTGTCTGCTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTGTGGAGGATGCGATATGCGCGAATAATGTTTAAAAAAA ]
[+] EMBL AA752567             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGACCTACGATAACGAGGGCCGGTTCATGCCGGTGAACTTCGAGAACATCTTCAGCAAGTACGCGCGCACGTCCCCTGACAGGCTCACCTACAGGGAGGTGTGGC AGATGACCGAGGGGAACCGCG AAGTGCTCGATCTCTTCGGATGGTTCGCGGCGAA STGGAAGTGGACGATCCTGTACGTDCTGGCGAGGGACGARGAAGGGTACCTGGCGAGGGAGGCCATMCSGCGCATGTACSACGGGAGCCTGTTCGAGTACMHNGCGATGCAGCGSGGAGCARCACGCGTAAGAGTGTCCTAGAGWTAGCBTTAGRTTAGCTACTGGATCGGGTCTGTGGGTGTGAGATCGMGCCTGTGACRCAGGGGACATGCgaa                                                                                                                                                                           ]
[+] EMBL AU172721             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGTGTGGCAAGATGACCGAGGGGAACCGCGAAAGTGCTCGATCTCTTCGGATGGTTCGCGGCGAAGCTGG AGTGGACGATCCTGTACGTGCTGGCGAGGGACGAGGAAGGGTACCTGGCGAGGGAGGCCATCCGGCGCATGTACGACGGGAGCCTGTTCGAGTACGTGGCGATGCAGCG GGAGCAGCACGC TAAGA TGTCCTAGA TTAGC TTAG TTAGCTACTGGATC GGTCTGTGGGTGTGAGATCGAGCCTGTGACGCAGGGGACATGCAACGGTGCTCTGCCTGCCGGCTTAGGTCTGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGCGTGTCGTGTCTGCTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTGTGGAGGATGCGATA      AAAAA     AAAAAAA ]
[+] EMBL AU172692             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          A TTAGC TTAG TTAGCTACTGGATC GGTCTGTGGGTGTGAGATCGAGCCTGTGACGCAGGGGACATGCAACGGTGCTCTGCCTGCCGGCTTAGGTCTGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGCGTGTCGTGTCTGCTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTGTGGAGGATGCGATATGCGCGAATAA     AAAAAAAA]


>consensus_12564#0 ACACGTTGCAACTGCGACTAGTCGATCTCATCGATCTCTCAAAAGACTACGAGCTCTTCA CAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCCAAGCGGAAGCGGAGGGATGCAG GGGACAACGACGACCAAGGCCGGGCGCAACGGCGACCGCGCCGGCACCGAAGCCCCGGGC GCGACGAGGGCGACTGACGGCAAGGTCGGGCGTGGAGGCCAAGGACTCGCTGACCATCGT CGCGCTGCAGTCGCCGGTCACCGTCGAGCGCCCCGTCCGCGGCGACCTCGAGGAACACGT CCCCAAGCCATATCTTGCGAGAGCGCTGGCGGCGCCGGACATCTACCACCCAGACGGAAC CACGACGGACGATCACGAGCACCACCACCTCAGCGTGCTGCAGCAGCACGTCGCCTTCTT CGACCGCGACGACAACGGCATCATCTACCCATGGGAAACCTACGAAGGGTGCCGTGCGCT TGGGTTCAACATGATCATGTCCTTCCTCATTGCTCTGGTCGTGAACGTGTCCATGAGCTA CCCCACGCTGCCTGGCTGGCTGCCGTCCCCGTTCTTCCCGATCTACATCCACAACATCCA CAGGAGTAAGCACGGGAGTGACTCTGGGACCTACGATAACGAGGGCCGGTTCATGCCGGT GAACTTCGAGAACATCTTCAGCAAGTACGCGCGCACGTCCCCTGACAGGCTCACCTACAG GGAGGTGTGGCAGATGACCGAGGGGAACCGCGAAGTGCTCGATCTCTTCGGATGGTTCGC GGCGAAGCTGGAGTGGACGATCCTGTACGTGCTGGCGAGGGACGAGGAAGGGTACCTGGC GAGGGAGGCCATCCGGCGCATGTACGACGGGAGCCTGTTCGAGTACGTGGCGATGCAGCG GGAGCAGCACGCTAAGATGTCCTAGATTAGCTTAGTTAGCTACTGGATCGGTCTGTGGGT GTGAGATCGAGCCTGTGACGCAGGGGACATGCAACGGTGCTCTGCCTGCCGGCTTAGGTC TGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGCGTGTCGTGTCTG CTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTGTGGAGGATGCGA TATGCGCGAATAAAAAAAAAA



consensusID : consensus_12564#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 592
fasta sequence
                              [NNNNNTCNGGGTGAGGATTCNGCACGAGCAATGCGATAGTCGATCTCATCGATCTCTCAAAAGACTACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCCAAGCGGAAGCGGAGGGATGCAGGGGACAACGACGACCAAGGCCGGGCGCAACGGCGACCGCGCCGGCACCGAAGCCCCGGGCGCGACGAGGGCGACTGACGGGAGGGGCGGCGCCGCCGTGGCAGCCCGCAAGGTCGGGGACATGCGCGGCGTGTCGGGCGTGGAGGCCAAGGACTCGCTGACCATCGTCGCGCTGCAGTCGCCGGTCACCGTCGAGCGCCCCGTCCGCGGCGACCTCGAGGAACACGTCCCCAAGCCATATCTTNCGAGACCCTTGGCGGCGCCGGACATTTACCAACCAGACGGAACCACGACGGACGNTTACGAGCAACAACAACTTAGCNT-CTTCAAGAAG-AAGTTGGCTTCTTCGACCGCGACGACAACGGCATCATCTACCCATGGGAAACCTACGAAGGGTGCCGTGCGCTTGGGTTCAACATGATCATGTCCTTCCTCATTGCTCTGGTCGTGAACGT]

[+] EMBL AA752813             [NNNNNTCNGGGTGAGGATTCNGCACGAGCAATGCGATAGTCGATCTCATCGATCTCTCAAAAGA TACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCCAAGCGGAAGCGGAGGGATGCAGGGGACAACNACCACCAAGGCCGGGCGCAACGGCGACCGCGCCGGCACCGAANCCCCGGGCGCGACGANGGCGACTGACGGGAGGGGCGGCGCCGCCGTGGCA CCCGCAAGGTCGGGGACATGCCCGGCGTGTCTGGCGTGGA GCCAANGACTCNCTGACCATCGTCNCGCTNCNTTCNCCGGTCACCGTCNANCGCCC                                                                                                                                                                                                                                                                ]
[+] EMBL C28103               [                                            CTCATCGATCTCTCAAAAGACTACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCCAAG GNAAGCGNAGGGATGCAGGGGACAACGACGACCAAGGCCGGGCGCAACGGCGACCGCGCCGGCACCGAAGCCCCGGGCGCGACGAGGGCGACTNACGGGAGGGGCGGCGCCG CGTGGCAGCCCGCAAGGTCGGGGACATGCGCGGCGTGTCGGGCGTTGAGGCCAAGGACTCGCTGACCATCGTCGCGCTGCAGTCGCCGGTCACCGTCGAGCGCCCCGTCCGCGGCGACCTCGAGGAACACGTCCCCAAGCCATATCTTNCGAGACCCTTGGCGGCGCCGGACATTTACCAACCAGACGGAACCACGACGGACGNTTACGAGCAACAACAACTTAGCNT CTTCAAGAAG AAGTTGGCT                                                                                                                ]
[+] EMBL CF306428             [                                                            AAGACTACGAGCTCTT ACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCCAAGCGGAAGCGGAGGGATGCAGGGGACAACGACGACCAAGGCCGGGCGCAACGGCGACCGCGCCGGCACCGAAGCCCCGGGCGCGACGAGGGCGACTGAC GGAGGGGCGGCGCCGCCGTGGCAGCCCGCAAGGTCGGGGACATGCGCGGCGTGTCGGGCGTGGAGGCCAAGGACTCGCTGACCATCGTCGCGCTGCAGTCGCCGGTCACCGTCGAGCGCCCCGTCCGCGGCGACCTCGAGGAACACGTCCCCAAGCCATATCTTGCGAGAGCGCTGGCGGCGCCGGACATCTACCACCCAGACGGAACCACGACGGACGATCACGAGCACCACCACCTCAGCGTGCTGC AGCAGCACGTCGCCTTCTTCGACCGCGACGACAACGGCATCATCTACCCATGGGAAACCTACGAAGGGTGCCGTGCGCTTGGGTTCAACATGATCATGTCCTTCCTCATTGCTCTGGTCGTGAACGT]


>consensus_12564#1 NNNNNTCNGGGTGAGGATTCNGCACGAGCAATGCGATAGTCGATCTCATCGATCTCTCAA AAGACTACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCCAAGC GGAAGCGGAGGGATGCAGGGGACAACGACGACCAAGGCCGGGCGCAACGGCGACCGCGCC GGCACCGAAGCCCCGGGCGCGACGAGGGCGACTGACGGGAGGGGCGGCGCCGCCGTGGCA GCCCGCAAGGTCGGGGACATGCGCGGCGTGTCGGGCGTGGAGGCCAAGGACTCGCTGACC ATCGTCGCGCTGCAGTCGCCGGTCACCGTCGAGCGCCCCGTCCGCGGCGACCTCGAGGAA CACGTCCCCAAGCCATATCTTNCGAGACCCTTGGCGGCGCCGGACATTTACCAACCAGAC GGAACCACGACGGACGNTTACGAGCAACAACAACTTAGCNTCTTCAAGAAGAAGTTGGCT TCTTCGACCGCGACGACAACGGCATCATCTACCCATGGGAAACCTACGAAGGGTGCCGTG CGCTTGGGTTCAACATGATCATGTCCTTCCTCATTGCTCTGGTCGTGAACGT



consensusID : consensus_12564#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 497
fasta sequence
                              [CTCTCTGTCTACTGCTTTTGCTGCCTGGAAAATCTGCTGAAGCCTGGATTAAACTAAAAGTGTCTCTAACTTACTATAGGAAAATACTTAGGCTGTAGTGTACTCTATCTGTATTCTAACCTGCCTCTATAGACTCTCTGTAATACTGACTTCTACTTACTAGGGAAAGCTTGGCTACTGCTCTTGCTAGGTACTCTGGTTCTCTGGAATTTCTCTCTGGGGTCTGACTCTCTACTGCTGTTCTCTGAGCTTTAGTTAGCTTACTTGGACTCTGAGCTCTTGCTGGGCTGCTGAAGATTCTGAGCTCTTGTGAACTGCTAGGGGGGAACTACTGCTAACTGGTTGCTTCTTGCTCTTGACCGGCTTAGGTCTGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGCGTGTCGTGTCTGCTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTGATGGAAGAAAAAAAAAAA]

[+] EMBL BI804365             [CTCTCTGTCTACTGCTTTTGCTGCCTGGAAAATCTGCTGAAGCCTGGATTAAACTAAAAGTGTCTCTAACTTACTATAGGAAAATACTTAGGCTGTAGTGTACTCTATCTGTATTCTAACCTGCCTCTATAGACTCTCTGTAATACTGACTTCTACTTACTAGGGAAAGCTTGGCTACTGCTCTTGCTAGGTACTCTGGTTCTCTGGAATTTCTCTCTGGGGTCTGACTCTCTACTGCTGTTCTCTGAGCTTTAGTTAGCTTACTTGGACTCTGAGCTCTTGCTGGGCTGCTGAAGATTCTGAGCTCTTGTGAACTGCTAGGGGGGAACTACTGCTAACTGGTTGCTTCTTGCTCTTGACCGGCTTAGGTCTGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGCGTGTCGTGTCTGCTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTGATGGAAGAAAAAAAAAAA]


>consensus_12564#2 CTCTCTGTCTACTGCTTTTGCTGCCTGGAAAATCTGCTGAAGCCTGGATTAAACTAAAAG TGTCTCTAACTTACTATAGGAAAATACTTAGGCTGTAGTGTACTCTATCTGTATTCTAAC CTGCCTCTATAGACTCTCTGTAATACTGACTTCTACTTACTAGGGAAAGCTTGGCTACTG CTCTTGCTAGGTACTCTGGTTCTCTGGAATTTCTCTCTGGGGTCTGACTCTCTACTGCTG TTCTCTGAGCTTTAGTTAGCTTACTTGGACTCTGAGCTCTTGCTGGGCTGCTGAAGATTC TGAGCTCTTGTGAACTGCTAGGGGGGAACTACTGCTAACTGGTTGCTTCTTGCTCTTGAC CGGCTTAGGTCTGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGCG TGTCGTGTCTGCTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTGA TGGAAGAAAAAAAAAAA



consensusID : consensus_12564#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 188
fasta sequence
                              [ACTGCGACTAGTCGATCTCATCGATCTCTCAAAAGACTACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCAAGGAANGCGNANGGGATGCAGGGGACAACGACNACCAAGGCCNNGCNCAACGGNACCCNNCNNCTATCCGAAGCCCCGGGGCGACGAGGGCGACTGACGG]

[+] EMBL OSC796               [ACTGCGACTAGTCGATCTCATCGATCTCTCAAAAGACTACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCAAGGAANGCGNANGGGATGCAGGGGACAACGACNACCAAGGCCNNGCNCAACGGNACCCNNCNNCTATCCGAAGCCCCGGGGCGACGAGGGCGACTGACGG]


>consensus_12564#3 ACTGCGACTAGTCGATCTCATCGATCTCTCAAAAGACTACGAGCTCTTCACAGGGAATCG AGTGTGTTTCGGTCGTTTGGGCCGCGCAAGGAANGCGNANGGGATGCAGGGGACAACGAC NACCAAGGCCNNGCNCAACGGNACCCNNCNNCTATCCGAAGCCCCGGGGCGACGAGGGCG ACTGACGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12564#1      NNNNNTCNGGGTGAGGATTCNGCACGAGCAATGCGA-TAGTCGATCTCATCGATCTCTCA 59
consensus_12564#3      -----------------------------ACTGCGACTAGTCGATCTCATCGATCTCTCA 31
consensus_12564#0      -------------------ACACGTTGCAACTGCGACTAGTCGATCTCATCGATCTCTCA 41
consensus_12564#2      --------------------------------CTCTCTGTCTACTGCTTTTGCTGCCTGG 28
                                                            *      *    * * *  **  

consensus_12564#1      AAAGACTACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCCAAG 119
consensus_12564#3      AAAGACTACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCAAGG 91
consensus_12564#0      AAAGACTACGAGCTCTTCACAGGGAATCGAGTGTGTTTCGGTCGTTTGGGCCGCGCCAAG 101
consensus_12564#2      AAAATCTGCTGAAGCCT-GGATTAAACTAAAAGTGTCTCTAAC-TTACTATAGGAAAATA 86
                       ***  ** *     * *   *   **   *  **** **   * **      *    *  

consensus_12564#1      CGGAAGCGGAGGGATGCAGGGGACAACGACGACCAAGGCCGGGCGCAACGGCGACCGCGC 179
consensus_12564#3      AANGCGNAN-GGGATGCAGGGGACAACGACNACCAAGGCCNNGCNCAACGGNACCCNNCN 150
consensus_12564#0      CGGAAGCGGAGGGATGCAGGGGACAACGACGACCAAGGCCGGGCGCAACGGCGACCGCGC 161
consensus_12564#2      CTTAGGCTGTAGTGTACTCTATCTGTATTCTAACCTGCCTCTATAGACTCTCTGTAATAC 146
                            *     *  * *            * * *  * *       *             

consensus_12564#1      CGGCACCGAAGCCCCGGGCGCGACGAGGGCGACTGACGGGAGGGGCGGCGCCGCCGTGGC 239
consensus_12564#3      NCTATCCGAAGCCCCGGG-GCGACGAGGGCGACTGACGG--------------------- 188
consensus_12564#0      CGGCACCGAAGCCCCGGGCGCGACGAGGGCGACTGACGGCAAGG---------------- 205
consensus_12564#2      TGACTTCTACTTACTAGG-GAAAGCTTGGCTACTGCTCTTGCTAGGTACTCTG------- 198
                             * *    *  ** *  *    *** ****                         

consensus_12564#1      AGCCCGCAAGGTCGGGGACATGCGCGGCGTGTCGGGCGTGGAGGCCAAGGACTCGCTGAC 299
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      -------------------------------TCGGGCGTGGAGGCCAAGGACTCGCTGAC 234
consensus_12564#2      -------------------GTTCTCTGGAATTTCTCTCTGGGGTCTGACTCTCTACTGCT 239
                                                                                   

consensus_12564#1      CATCGTCGCGCTGCAGTCGCCGGTCACCGTCGAGCGCCCCGTCCGCGGCGACCTCGAGGA 359
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      CATCGTCGCGCTGCAGTCGCCGGTCACCGTCGAGCGCCCCGTCCGCGGCGACCTCGAGGA 294
consensus_12564#2      GTTCTCTGAGCTTTAGTTAGCTTACTTGGACTCTGAGCTCTTGCTGGGCTGCTGAAGATT 299
                                                                                   

consensus_12564#1      ACACGTCCCCAAGCCATATCTTNCGAGACCCTTGGCGGCGCCGGACATTTACCAACCAGA 419
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      ACACGTCCCCAAGCCATATCTTGCGAGAGCGCTGGCGGCGCCGGACATCTACCACCCAGA 354
consensus_12564#2      CTGAGCTCTTGTGAACTGCTAGGGGGGAACTACTGCTAACTGGTTGCTTCTTGCTCTTGA 359
                                                                                   

consensus_12564#1      CGGAACCACGACGGACGNTTACGAGCAACAACAACTTAGCNT-CTTCAAGAAGAAGTTGG 478
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      CGGAACCACGACGGACGATCACGAGCACCACCACCTCAGCGTGCTGCAGCAGCACGTCGC 414
consensus_12564#2      CCGGCTTAGGTCTGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGC 419
                                                                                   

consensus_12564#1      CTTCTTCGACCGCG-ACGACAACGGCATCATCTACCCATGGGAAACCTACGAAGGGTGCC 537
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      CTTCTTCGACCGCG-ACGACAACGGCATCATCTACCCATGGGAAACCTACGAAGGGTGCC 473
consensus_12564#2      GTGTCGTGTCTGCTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTG 479
                                                                                   

consensus_12564#1      GTGCGCTTGGGTTCAACATGATCATGTCCTTCCTCATTGCTCTGGTCGTGAACGT----- 592
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      GTGCGCTTGGGTTCAACATGATCATGTCCTTCCTCATTGCTCTGGTCGTGAACGTGTCCA 533
consensus_12564#2      ATGGAAGAAAAAAAAAAA------------------------------------------ 497
                                                                                   

consensus_12564#1      ------------------------------------------------------------
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      TGAGCTACCCCACGCTGCCTGGCTGGCTGCCGTCCCCGTTCTTCCCGATCTACATCCACA 593
consensus_12564#2      ------------------------------------------------------------
                                                                                   

consensus_12564#1      ------------------------------------------------------------
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      ACATCCACAGGAGTAAGCACGGGAGTGACTCTGGGACCTACGATAACGAGGGCCGGTTCA 653
consensus_12564#2      ------------------------------------------------------------
                                                                                   

consensus_12564#1      ------------------------------------------------------------
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      TGCCGGTGAACTTCGAGAACATCTTCAGCAAGTACGCGCGCACGTCCCCTGACAGGCTCA 713
consensus_12564#2      ------------------------------------------------------------
                                                                                   

consensus_12564#1      ------------------------------------------------------------
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      CCTACAGGGAGGTGTGGCAGATGACCGAGGGGAACCGCGAAGTGCTCGATCTCTTCGGAT 773
consensus_12564#2      ------------------------------------------------------------
                                                                                   

consensus_12564#1      ------------------------------------------------------------
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      GGTTCGCGGCGAAGCTGGAGTGGACGATCCTGTACGTGCTGGCGAGGGACGAGGAAGGGT 833
consensus_12564#2      ------------------------------------------------------------
                                                                                   

consensus_12564#1      ------------------------------------------------------------
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      ACCTGGCGAGGGAGGCCATCCGGCGCATGTACGACGGGAGCCTGTTCGAGTACGTGGCGA 893
consensus_12564#2      ------------------------------------------------------------
                                                                                   

consensus_12564#1      ------------------------------------------------------------
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      TGCAGCGGGAGCAGCACGCTAAGATGTCCTAGATTAGCTTAGTTAGCTACTGGATCGGTC 953
consensus_12564#2      ------------------------------------------------------------
                                                                                   

consensus_12564#1      ------------------------------------------------------------
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      TGTGGGTGTGAGATCGAGCCTGTGACGCAGGGGACATGCAACGGTGCTCTGCCTGCCGGC 1013
consensus_12564#2      ------------------------------------------------------------
                                                                                   

consensus_12564#1      ------------------------------------------------------------
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      TTAGGTCTGGTGTTCTCTCTGGACTCTGGGTGATAACAAAAGAACACCCAGATGCGTGTC 1073
consensus_12564#2      ------------------------------------------------------------
                                                                                   

consensus_12564#1      ------------------------------------------------------------
consensus_12564#3      ------------------------------------------------------------
consensus_12564#0      GTGTCTGCTTGTAATTAACTTTGTATCTTGATGCAAGAGAAATAAGAATAACGTGTGGAG 1133
consensus_12564#2      ------------------------------------------------------------
                                                                                   

consensus_12564#1      ----------------------------
consensus_12564#3      ----------------------------
consensus_12564#0      GATGCGATATGCGCGAATAAAAAAAAAA 1161
consensus_12564#2      ----------------------------
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)