These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12567#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1837 fasta sequence [ATCTCAATCCCTTGCTGGTTGCAATAGCACGAGAAATATATATAAAATTAAGGCAAAACGGTGGGAGGGCGGAGGTGGTTGAGGTGAAGCGAGGCCTCGCCGCATCTACCGGAGCGGCGTAGCCGGCGATCGGAGATGACGATCCCGAGAAGAAGGTGATGTCCAATCGGAGAGGATTTTAGGGTTTGTGCGCTTGCAACATCGCGTGATGAGCTCATCCGAGGATGACTTGTACTTGGCCTGTCGAGCAGCACATCCCCTCCGTGATCTGCTCCAGGACGCCGCGCCTCTCCTCGTCGCTCCACGCGTCGTCTCTCGCCGCCGCGGCCTCCCAGGCGCCGGGGCCCTTGTGCTCGACGTGCCCACGCTTGTACAGCGCGACGCGGCGCAGCGCCGACGTCGACGCCTCCATGGCGAACCTCACGAGCTGGACATGCCGCCTCTCCGCGCTCCGGAAGCCCATCACCACCAGCTCCTTCAAATGGCGGTGCCGCGAAGCCGAGTTCGGCCATGGCCCGGCTGCACCACCTCCTCTTCGCTGTGATGGTGGACATGGAGGGTCTCCAGCAATGGCGTCGCCTCGACGAGGAGGCGTGGCCACGATGCGTCCCAGGATGGAGGCACGTCGGCGACGAGGAGCCGCCGCAGCTTGGGCATCGGGGCGAAAGGGCTCGTCGGCAAGAACAAGATCCACATGTACGGCCCGGTGAAGCGCAGGACGAGATCGGTGATGCCATTGGCGTTCTGGAGGAACTCCCTGATGCTGGGGATCAAGAAGCGCAGCCTCCTGCGCTCTATGGCCGGGAACAGCTCGTCCCCTTGCAGGGAGCCAATGGCGTGCTCGAGGCTCACGCGCTGGAGGTACGGCGCGGCGTCGGGGTGCGTCAGAAACACGGCGTCTCCATTGCTGGCGAGGCTCTCCAGCATGGGGAGCGACCTGATCTCGACCGCCATGTAGCCGCCGTCGACGACGAGCTCCCTGATCCGCGACATCGGCGCGTCCAAGGTGAGCGGGCACCCGAATTTCCGGGACCTGCAGGAGCTGAGATGCAGGGATTGCAGCTGCGGGCACGCGGCGACCACGCGGTACACGGCGGGCCGCGTCGAGCACGGCAATCCTTGCAGGACGAGAGTGGCGAGCGAGCCAAACCCCTGCAGCGGAGGGGGCAGGCAGTTGCGAAGCTTGAGCCTCCGCAGCCGCGACGCGCCGGGGTCGCGGCTGATGCGGCGAAGGGGGAAGCTGTAGACCGGCGGCGGGTGCATGATCGGCCCCGTCGGCACGGCGGACACCTCGAGGTCCGTGACGCCCCAGGAATCGACGGCGGTGACGACCAGCTGGTTGATGCAGGGGGAGGCGTCGAAGTCGAACACCTCCAGCGACAGCCTGGTCGCACGCCGGCGAGCCGCCAAGAGGGCCCTGACGGAGCCGGCCATGGCGCGCATGGCGCGGCGCTCGTACCGCCCGGTGGCGGCGTCTAGCCTCGCGCATTCTCCTCGCGCGCGGTGACCGACCTCCTGGCCTTGCCGCGGATGGCAAGGCACCGGCGGTAGCGCGGCGGCAGCAGGTCGGTGACTCGGAAATCGAGGGCGGGGAGCTCGCGCGGGACGGCCGCCCAGCGCCTTGACAGCGCGGCGGTGGCGAGCGCGTCGCGGGTGTCGAGGCGGCGCAGGATGAGGTGGAGCAGGTCGTCCGGGAGAGCGCTGAGGCGGTCCTCGCCGCAGGCTCGCCGTCGCCGCCGATCCTTGTTGCTCCTAGTCCTAGCCATCGGAGAACAACCCCCCAAGTGGAGTAGTATTGCTCTTGCTCTGCTCTAATTTCTAAAATTCAGTGATGATT] [+] EMBL AK106661 [ATCTCAATCCCTTGCTGGTTGCAATAGCACGAGAAATATATATAAAATTAAGGCAAAACGGTGGGAGGGCGGAGGTGGTTGAGGTGAAGCGAGGCCTCGCCGCATCTACCGGAGCGGCGTAGCCGGCGATCGGAGATGACGATCCCGAGAAGAAGGTGATGTCCAATCGGAGAGGATTTTAGGGTTTGTGCGCTTGCAACATCGCGTGATGAGCTCATCCGAGGATGACTTGTACTTGGCCTGTCGAGCAGCACATCCCCTCCGTGATCTGCTCCAGGACGCCGCGCCTCTCCTCGTCGCTCCACGCGTCGTCTCTCGCCGCCGCGGCCTCCCAGGCGCCGGGGCCCTTGTGCTCGACGTGCCCACGCTTGTACAGCGCGACGCGGCGCAGCGCCGACGTCGACGCCTCCATGGCGAACCTCACGAGCTGGACATGCCGCCTCTCCGCGCTCCGGAAGCCCATCACCACCAGCTCCTTCAAATGGCGGTGCCGCGAAGCCGAGTTCGGCCATGGCCCGGCTGCACCACCTCCTCTTCGCTGTGATGGTGGACATGGAGGGTCTCCAGCAATGGCGTCGCCTCGACGAGGAGGCGTGGCCACGATGCGTCCCAGGATGGAGGCACGTCGGCGACGAGGAGCCGCCGCAGCTTGGGCATCGGGGCGAAAGGGCTCGTCGGCAAGAACAAGATCCACATGTACGGCCCGGTGAAGCGCAGGACGAGATCGGTGATGCCATTGGCGTTCTGGAGGAACTCCCTGATGCTGGGGATCAAGAAGCGCAGCCTCCTGCGCTCTATGGCCGGGAACAGCTCGTCCCCTTGCAGGGAGCCAATGGCGTGCTCGAGGCTCACGCGCTGGAGGTACGGCGCGGCGTCGGGGTGCGTCAGAAACACGGCGTCTCCATTGCTGGCGAGGCTCTCCAGCATGGGGAGCGACCTGATCTCGACCGCCATGTAGCCGCCGTCGACGACGAGCTCCCTGATCCGCGACATCGGCGCGTCCAAGGTGAGCGGGCACCCGAATTTCCGGGACCTGCAGGAGCTGAGATGCAGGGATTGCAGCTGCGGGCACGCGGCGACCACGCGGTACACGGCGGGCCGCGTCGAGCACGGCAATCCTTGCAGGACGAGAGTGGCGAGCGAGCCAAACCCCTGCAGCGGAGGGGGCAGGCAGTTGCGAAGCTTGAGCCTCCGCAGCCGCGACGCGCCGGGGTCGCGGCTGATGCGGCGAAGGGGGAAGCTGTAGACCGGCGGCGGGTGCATGATCGGCCCCGTCGGCACGGCGGACACCTCGAGGTCCGTGACGCCCCAGGAATCGACGGCGGTGACGACCAGCTGGTTGATGCAGGGGGAGGCGTCGAAGTCGAACACCTCCAGCGACAGCCTGGTCGCACGCCGGCGAGCCGCCAAGAGGGCCCTGACGGAGCCGGCCATGGCGCGCATGGCGCGGCGCTCGTACCGCCCGGTGGCGGCGTCTAGCCTCGCGCATTCTCCTCGCGCGCGGTGACCGACCTCCTGGCCTTGCCGCGGATGGCAAGGCACCGGCGGTAGCGCGGCGGCAGCAGGTCGGTGACTCGGAAATCGAGGGCGGGGAGCTCGCGCGGGACGGCCGCCCAGCGCCTTGACAGCGCGGCGGTGGCGAGCGCGTCGCGGGTGTCGAGGCGGCGCAGGATGAGGTGGAGCAGGTCGTCCGGGAGAGCGCTGAGGCGGTCCTCGCCGCAGGCTCGCCGTCGCCGCCGATCCTTGTTGCTCCTAGTCCTAGCCATCGGAGAACAACCCCCCAAGTGGAGTAGTATTGCTCTTGCTCTGCTCTAATTTCTAAAATTCAGTGATGATT] consensusID : consensus_12567#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1334 fasta sequence [CGCCGCATCTACCGGAGCGGCGTAGCCGGCGATCGGAGATGACGATCCCGAGAAGAAGGTCTTCACCGTCAGTCAGTCACCTCGTTCCTCGTCGTGTGCCTATCCATTTTCGCGCCCTACGGCTACGAGTGCGGTGGTCGTCACAGCCCACAGCCACAGGCGCTTTGTAGCGACGTGTGGATCCGTCTCGATCCTTCGCGTCGCCACCGTCCTTACCGCCACACGCCTTCCGTATATAGCTCTCCCGCGGACGAACACCTGTCGTGCACTGCGCGCGGGGGGTGGCGGACGATCGGATCGGGAGAGGACGCGACGCGAGGCGGGCTGCGTTGTGAGGGAGAGAAGGGATGCTGGCGGTGTTCGATCGGGCGGTGGCGCCGAGCCCTGAGGGGCTCCGGCATCCCGGGGCGGCGGGGGACGGCGCGGCGGGGCTCGCCGAGAGGTTCCGCGACGCGCGCCCCGGCGCCGTCACCGTCGCCCTCGGCCCCGGCGGCGCCAACTCCCTCGCCTACTCCTCCCACGGCCAGAGCCCCCTCCTCCCCAGGTTGTTCGCGGCGACGGACGAGATATTCTGCCTGTTCCAAGGCACGATCGAGAACATCGCG-GTGCTGAAGCAGCAGTACGGGTTGCACAACAAGGGCTCCACCGAGATCAACATCATCATCGAGGCTTACAGGACATTGAGAGAC-AGGGGACCTTACCCTGCGGATCAAGTCGTCAGAGACATCAACGGCAAGTTCGCGTTCGTGCTCTACGATTGCTCCAACAACTCCGTCTTCATGGCCACCGATGCTGATGGTAGCGTTCCATTTTATTGGGGAGTTGATCCTGACAGCCGTCTTGTGGTTTCTGATGATGACGAACTTGTGAATAAGGCTTGTGGAAAATCCTCTGCACCATTCTCTAGAGGTTTCTTCTTCACCACATCCGGAGGACTGCAGAGCTACGAACACCCTATGAATGAGGTGAAACCAGTGCCGAGGCTCGACAGCAAGGGGGAGGTACGCGGCACAACGTACACGGTCGACGCGAAGGCGAAGAAGGATAGCAGCATTCCTAGAGTTGGCAGCGCTGCGGATTGGTCCTCGCAATACTAAAACCGTATAAATCGTCAGAAGCATATGGTATGATGACCTAGAAACCTTTGCTGCAATTACATGGAGAGCCCTAGGCTTCCGGGTTGTCCACGGTTACAAGTGGGCATTTGCCATCTGAAATGTTTATCTGGATGGTCAGCCTTGTGCTGTGCTGCTGTCTGAAATTTCTGTCCTGTCCCCCATTACTGAAGAATGAGAGCGTGTGGGTCTTGAATTTCCAATAAAAAAAAAAAAAAA] [+] EMBL CB670077 [CGCCGCATCTACCGGAGCGGCGTAGCCGGCGATCGGAGATGACGATCCCGAGAAGAAGGTCTTCACCGTCAGTCAGTCACCTCGTTCCTCGTCGTGTGCCTATCCATTTTCGCGCCCTACGGCTACGAGTGCGGTGGTCGTCACAGCCCACAGCCACAGGCGCTTTGTAGCGACGTGTGGATCCGTCTCGATCCTTCGCGTCGCCACCGTCCTTACCGCCACACGCCTTCCGTATATAGCTCTCCCGCGGACGAACACCTGTCGTGCACTGCGCGCGGGGGGTGGCGGACGATCGGATCGGGAGAGGACGCGACGCGAGGCGGGCTGCGTTGTGAGGGAGAGAAGGGATGCTGGCGGTGTTCGATCGGGCGGTGGCGCCGAGCCCTGAGGGGCTCCGGCATCCCGGGGCGGCGGGGGACGGCGCGGCGGGGCTCGCCGAGAGGTTCCGCGACGCGCGCCCCGGCGCCGTCACCGTCGCCCTCGGCCCCGGCGGCGCCAACTCCCTCGCCTACTCCTCCCACGGCCAGAGCCCCCTCCTCCCCAGGTTGTTCGCGGCGACGGACGAGATATTCTGCCTGTTCCAAGGCACGATCGAGAACATCGCG GTGCTGAAGCAGCAGTACGGGTTGCACAACAAGGGCTCCACCGAGATCAACATCATCATCGAGGCTTACAGGACATTGAGAGAC AGGGGACCTTACCCTGCGGATCAAGTCGTCAGAGACATCAACGGCAAGTTCGCGTTCGTGCTCTACGATTG ] [+] EMBL C72144 [ TCCTTCGCGTCGCCACCGTCCTTACCGCCACACGCCTTCCGTATATAGCTCTCCCGCGGACGAACACCTGTCGTGCACTGCGCGCGGGGGGTGGCGGACGATCGGATCGGGAGAGGACGCGACGCGAGGCGGGCTGCGTTGTGAGGGAGAGAAGGGATGCTGGCGGTGTTCGATCGGGCGGTGGCGCCGAGCCCTGAGGGGCTCCGGCATCCCGGGGCGGCGGGGGACGGCGCGGCGGGGCTCGCCGAGAGGTTCCGCGACGCGCGCCCCGGCGCCGTCACCGTCGCCCTCGGCCCCGGCGGCGCCAACTCCCTCGCCTACTCCTCCCACGGCCAGAGCCCCCTCCTCCCCAGGTTGTTCGCGGCGACGGACGAGATATTCTGCCTGTTCCAAGGCACGATCGAGAACATCGNGNGTGCTGAAGCAGCAGTACGGGTTGCAC ] [+] EMBL CB654675 [ CGCCACACGCCTTCCGTATATAGCTCTCCCGCGGACGAACACCTGTCGTGCACTGCGCGCGGGGGGTGGCGGACGATCGGATCGGGAGAGGACGCGACGCGAGGCGGGCTGCGTTGTGAGGGAGAGAAGGGATGCTGGCGGTGTTCGATCGGGCGGTGGCGCCGAGCCCTGAGGGGCTCCGGCATCCCGGGGCGGCGGGGGACGGCGCGGCGGGGCTCGCCGAGAGGTTCCGCGACGCGCGCCCCGGCGCCGTCACCGTCGCCCTCGGCCCCGGCGGCGCCAACTCCCTCGCCTACTCCTCCCACGGCCAGAGCCCCCTCCTCCCCAGGTTGTTCGCGGCGACGGACGAGATATTCTGCCTGTTCCAAGGCACGATCGAGAACATCGCG GTGCTGAAGCATCAGTACGGGTTGCACAACAAGGGCTCCACCGAGATCAACATCATCATCGAGGCTTACAGGACATTGAGAGAC AGGGGACCTTACCCTGCGGATCAAGTCGTCAGAGACATCAACGGCAAGTTCGCGTTCGTGCTCTACGATTGCTCCAACAACTCCGTCTTCATGGCCACCGATGCTGATGGTAGCGTTCCATTTTATTGGGGAGTTGATCCTGACAGCCGTCTTGTGGTTTCTGATGATGACGAACTTGTGAATAAGGCTTGTGGAAAATCCTCTGCACCATTCTCTAGAGGTTTCTT ] [+] EMBL C28828 [ GATCGGGAGAGGACGCGACG GAGGCGGGCTGCGTTGTGAGGGAGAGAAGGGATGCTGGCGGTGTTCGATCGGGCGGTGGCGCCGAGCCCTGAGGGGCTCCGGCATCCCGGGGCGGCGGGGGACGGCGCGGCGGGGCTCGCCGAGAGGTTCCGCGACG GCGCCCCGGCGNCGTCANCGTCGCCCTCGGCCCCGGCGGCGGCAACTCCCTCGNCTACTCCTCCCACGGCCAGAGCCCCCTCCTCCCCAGGTT ] [-] EMBL CA762255 [ cGAGACAAGGGGACCTTACCCTGCGGATCAAGTCGTCAGAGACATCAACGGCAAGTTCGCGTTCGTGCTCTACGATTGCTCCAACAACTCCGTCTTCATGGCCACCGATGCTGATGGTAGCGTTCCATTTTATTGGGGAGTTGATCCTGACAGCCGTCTTGTGGTTTCTGATGATGACGAAATTGTGAATAAGGCTTGTGGAAAATCCTCTGCACCATTCCCTAAAGGTTTCTTCTTCACCACATCCGGAGGACTGCAGAGCTACGAACACCCTATGAATGAGGTGAAACCAGTGCCGAGGCTCGACAGCAAGGGGGAGGTACGCGGCACAACGTACACGGTCGACGCGAAGGCGAAGAAGGATAGCAGCATTCCTAGAGTTGGCAGCGCTGCGGATTGGTCCTCGCAATACTAAAACCGTATAAATCGTCAGAAGCATATGGTATGATGACCTAGAAACCTTTGCTGCAATTACATGGAGAGCCCTAGGCTTCCGGGTTGTCCACGGTTACAAGTGGGCATTTGCCATCTGAAATGTTTATCTGGATGGTCAGCCTTGTGCTGTGCTGCTGTCTGAAATTTCTGTCCTGTCCCCCATTACTGAAGAATGAGAGCGTGTGGGTCTTGAATTTCCAATAAAAAAAAAAAAAAA] consensusID : consensus_12567#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1077 fasta sequence [GATCTCAATCCCTTGCTGGTTGCAATAGCACGAGAAATATATATAAAATTAAGGCAAAACGGTGGGAGGGCGGAGGTGGTTGAGGTGAAGCGAGGCCTCGCCGCATCTACCGGAGCGGCGTAGCCGGCGATCGGAGATGACGATCCCGAGAAGAAGGTTGTTCGCGGCGACGGACGAGATATTCTGCCTGTTCCAAGGCACGATCGAGAACATCGCGGTGCTGAAGCAGCAGTACGGGTTGCACAACAAGGGCTCCACCGAGATCAACATCATCATCGAGGCTTACAGGACATTGAGAGACAGGGGACCTTACCCTGCGGATCAAGTCGTCAGAGACATCAACGGCAAGTTCGCGTTCGTGCTCTACGATTGCTCCAACAACTCCGTCTTCATGGCCACCGATGCTGATGGTAGCGTTCCATTTTATTGGGGAGTTGATCCTGACAGCCGTCTTGTGGTTTCTGATGATGACGAAATTGTGAATAAGGCTTGTGGAAAATCCTCTGCACCATTCCCTAAAGGTTTCTTCTTCACCACATCCGGAGGACTGCAGAGCTACGAACACCCTATGAATGAGGTGAAACCAGTGCCGAGGCTCGACAGCAAGGGGGAGGTATGCGGCACAACGTACACGGTCGACGCGAAGGCGAAGAAGGATAGCAGCATTCCTAGAGTTGGCAGCGCTGCGGATTGGTCCTCGCAATACTAAAACCGTATAAATCGTCAGAAGCATATGGTATGATGACCTAGAAACCTTTGCTGCAATTACATGGAGAGCACTAGGCTTCCGGGTTGTCCACGGTTACAAGTGGGCATTTGCCATCTGAAATGTTCATCTGGATGGTCAGCCTTGTGCTGTGCTGCTGTC-TGAAATTTCTGTCCTGTCCACCATTACTGAAGAATGAGAGCGTGTGGGTCTTGAATTTCCAATAAAACGCAATGCCTTACAGATGTGTAAATAGATGTTTTTGCTTACTACAATATTTTCTGAACAATCAGCATATCTATAACTGTGGCTAGAATGAATCATCTCTAACGATGTGTGTTCTGTTACTTCTGTATGTGAAGTGATCTTCC] [+] EMBL AK064912 [GATCTCAATCCCTTGCTGGTTGCAATAGCACGAGAAATATATATAAAATTAAGGCAAAACGGTGGGAGGGCGGAGGTGGTTGAGGTGAAGCGAGGCCTCGCCGCATCTACCGGAGCGGCGTAGCCGGCGATCGGAGATGACGATCCCGAGAAGAAGGTTGTTCGCGGCGACGGACGAGATATTCTGCCTGTTCCAAGGCACGATCGAGAACATCGCGGTGCTGAAGCAGCAGTACGGGTTGCACAACAAGGGCTCCACCGAGATCAACATCATCATCGAGGCTTACAGGACATTGAGAGACAGGGGACCTTACCCTGCGGATCAAGTCGTCAGAGACATCAACGGCAAGTTCGCGTTCGTGCTCTACGATTGCTCCAACAACTCCGTCTTCATGGCCACCGATGCTGATGGTAGCGTTCCATTTTATTGGGGAGTTGATCCTGACAGCCGTCTTGTGGTTTCTGATGATGACGAAATTGTGAATAAGGCTTGTGGAAAATCCTCTGCACCATTCCCTAAAGGTTTCTTCTTCACCACATCCGGAGGACTGCAGAGCTACGAACACCCTATGAATGAGGTGAAACCAGTGCCGAGGCTCGACAGCAAGGGGGAGGTATGCGGCACAACGTACACGGTCGACGCGAAGGCGAAGAAGGATAGCAGCATTCCTAGAGTTGGCAGCGCTGCGGATTGGTCCTCGCAATACTAAAACCGTATAAATCGTCAGAAGCATATGGTATGATGACCTAGAAACCTTTGCTGCAATTACATGGAGAGCACTAGGCTTCCGGGTTGTCCACGGTTACAAGTGGGCATTTGCCATCTGAAATGTTCATCTGGATGGTCAGCCTTGTGCTGTGCTGCTGTC TGAAATTTCTGTCCTGTCCACCATTACTGAAGAATGAGAGCGTGTGGGTCTTGAATTTCCAATAAAACGCAATGCCTTACAGATGTGTAAATAGATGTTTTTGCTTACTACAATATTTTCTGAACAATCAGCATATCTATAACTGTGGCTAGAATGAATCATCTCTAACGATGTGTGTTCTGTTACTTCTGTATGTGAAGTGATCTTCC] [+] EMBL OS16747 [ GGC AAGAAGGATAGCAGCATTCCTAGAGTTGGCAGCGCTGCGGATTGGTGCTCGCAATACTAAAACCGTATAAATCGTCAGAAGCATATGGTATGATGACCTAGAAACCTTTGCTGCAATTACATGGAGAGCACTAGGCTTCCGGGTTGTCCACGGTTACAAGTGGGCATTTG CATCTGAAATGTTCATCTGGATGGTCAGCCTTGTGC GTGC GTGGTCGTGAAATTTCTGTCCTGTCCACCATTACTGAAGAATGAGAGCGTGTGGGTCTTGGATTTCCAATAAAACGCAATGCCTTACAGATGTGTAAATAGATGTTTTTGCTTACTACAATATTTTCTGAACAATCAGCATATCTATAACTGTGGCTAGAATGAATCATCTCTAACGATGTGTGTTCTGTTACTTCTGTATGTGAA ] consensusID : consensus_12567#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 529 fasta sequence [AAGGTTTCTTCTTCACCACATCCGGAGGACTGCAGAGCTACGAACACCCTATGAATGAGGTGAAACCAGTGCCGAGGCTCGACAGCAAGGGGGAGGTATCGGCACAACGTACACGGTCGACGCGAAGGCGAAGAAGGATACAGCACTTCCTAGAGTTGCAGCGCTGCGGATTGGTCCTCGCAATACTAAACCGTATAAATCGTCAGAAGCATATGGTATGATGACCTAGAAACCTTTGCTCAATTACATGGAGAGCACTAGGCTTCCGGGTTGTCCACGGTTACAAGTGGGCATTTGCCATCTGAAATGTTCATCTGGATGGTCAGCCTTGTGCTGTGCTGCTGTCTGAAATTTCTGTCCTGTCCACCATTACTGAAGAATGAGAGCGTGTGGGTCTTGAATTTCCAATAAAACGCAATGCCTTACAGATGTGTAAATAGATGTTTTTGCTTACTACAATATTTTCTGAACAATCAGCATATCTATAACTGTGGCTAGAATGAATCATCTCTAAAAAAAAAAAAANAAA] [+] EMBL BI807477 [AAGGTTTCTTCTTCACCACATCCGGAGGACTGCAGAGCTACGAACACCCTATGAATGAGGTGAAACCAGTGCCGAGGCTCGACAGCAAGGGGGAGGTATCGGCACAACGTACACGGTCGACGCGAAGGCGAAGAAGGATACAGCACTTCCTAGAGTTGCAGCGCTGCGGATTGGTCCTCGCAATACTAAACCGTATAAATCGTCAGAAGCATATGGTATGATGACCTAGAAACCTTTGCTCAATTACATGGAGAGCACTAGGCTTCCGGGTTGTCCACGGTTACAAGTGGGCATTT CCATCTGAAATGTTCATCTGGATGGTCAGCCTTGTGCTGTGCTGCTGTCTGAAATTTCTGTCCTGTCCACCATTACTGAAGAATGAGAGCGTGTGGGTCTTGAATTTCCAATAAAACGCAATGCCTTACAGATGTGTAAATAGATGTTTTTGCTTACTAC ATATTTTCTGAACAATCAGCAaaaaa ] [+] EMBL AU058048 [ CAATTACATGGAGAGCACTAGGCTTCCGGGTTGTCCACGGTTACAAGTGGGCATTTGCCATCTGAAATGTTCATCTGGATGGTCAGCCTTGTGCTGTGCTGCTGTCTGAAATTTCTGTCCTGTCCACCATTACTGAAGAATGAGAGCGTGTGGGTCTTGAATTTCCAATAAAACGCAATGCCTTACAGATGTGTAAATAGATGTTTTTGCTTACTACAATATTTTCTGAACAATCAGCATATCTATAACTGTGGCTAGAATGAATCATCTCTAAAAAAAAAAAAANAAA] [+] EMBL AU175201 [ AATTACATGGAGAGCACTAGGCTTCCGGGTTGTCCACGGTTACAAGTGGGCATTTGCAGTCTGAAATGTTCATCTGGATGGTCAGCCTTGTGCTGTGCTGCTGTCTGAAATTTCTGTCCTGTCCACCATTACTGAAGAATGAGAGCGTGTGGGTCTTGAATTTCCAATAAAACGCAATGCCTTACAGATGTGTAAATAGATGTTTTTGCTTACTACAATATTTTCTGAACAATCAGCATATCTATAACTGTGGCTAGAATGAATCATCTCTAAAAAAAAAAAAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 ------------------------------------------------------------ consensus_12567#0 ATCTCAATCCCTTGCTGGTTGCAATAGCACGAGAAATATATATAAAATTAAGGCAAAACG 60 consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 -------------------------------------CGCCGCATCTACCGGAGCGGCGT 23 consensus_12567#0 GTGGGAGGGCGGAGGTGGTTGAGGTGAAGCGAGGCCTCGCCGCATCTACCGGAGCGGCGT 120 consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 AGCCGGCGATCGGAGATGACGATCCCGAGAAGAAGGTCTTCACCGTCAGTCAGTCACCTC 83 consensus_12567#0 AGCCGGCGATCGGAGATGACGATCCCGAGAAGAAGGTGATGTCCAATCGGAGAGGATTTT 180 consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 GTTCCTCGTCGTGTGCCTATCCATTTTCGCGCCCTACGGCTACGAGTGCGGTGGTCGTCA 143 consensus_12567#0 AGGGTTTGTGCGCTTGCAACATCGCGTGATGAGCTCATCCGAGGATGACTTGTACTTGGC 240 consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 CAGCCCACAGCCACAGGCGCTTTGTA----GCGACGTGTGGATCCGTCTCGATCCTTCGC 199 consensus_12567#0 CTGTCGAGCAGCACATCCCCTCCGTGATCTGCTCCAGGACGCCGCGCCTCTCCTCGTCGC 300 consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 GTCGCCACCGTCCTTACCGCCACACGCCTTCCGTATATAGCTCTCCCGCGGACGAACACC 259 consensus_12567#0 TCCACGCGTCGTCTCTCGCCGCCGCGGCCTCCCAGGCGCCGGGGCCCTTGTGCTCGACGT 360 consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 TGTCGTGCACTGCGCGCGGGGGGTGGCGGACGATCGGATCGGGAGAGGACGCGACGCGAG 319 consensus_12567#0 GCCCACGCTTGTACAGCGCGACGCGGCGCAGCGCCGACGTCGACGCCTCCATGGCGAACC 420 consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 GCGGGCTGCGTTGTGAGGGAGAGAAGGGATGCTGGCGGTGTTCGATCGGGCGGTGGCGCC 379 consensus_12567#0 TCACGAGCTGGACATGCCGCCTCTCCGCGCTCCGGAAGCCCATCACCACCAGCTCCTTCA 480 consensus_12567#2 ----------GATCTCAATCCCTTGCTGGTTGCAATAGCACGAGAAATATATATAAAATT 50 consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 GAGCCCTGAGGGGCTCCGGCATCCCGGGGCGGCGGGGGACGGCGCGGCGGGGCTCGCCGA 439 consensus_12567#0 AATGGCGGTGCCGCGAAGCCGAGTTCGGCCATGGCCCGGCTGCACCACCTCCTCTTCGCT 540 consensus_12567#2 AAGGCAAAACG-GTGGGAGGGCGGAGGTGGTTGAGGTGAAGCGAGGCCTCGCCGCATCTA 109 consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 GAGGTTCCGCG-ACGCGCGCCCCGGCGCCGTCACCGTCGCCCTCGGCCCCGGCGGCGCCA 498 consensus_12567#0 GTGATGGTGGACATGGAGGGTCTCCAGCAATGGCGTCGCCTCGACGAGGAGGCGTGGCCA 600 consensus_12567#2 CC-GGAGCGGCGTAGCCGGCGATCGGAGATGACGATCCCGAGAAGAAGGTTGTTCGCGGC 168 consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 AC-TCCCTCGCCTACTCCTCCCACGGCCA-GAGCCCCCTCCTCCCCAGGTTGTTCGCGGC 556 consensus_12567#0 CGATGCGTCCCAGGATGGAGGCACGTCGGCGACGAGGAGCCGCCGCAGCTTGGGCATCGG 660 consensus_12567#2 GACGGACGAGATATTCTGCCTG-------TTCCAAGGCACGATCGAGAACATCGCGGTGC 221 consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 GACGGACGAGATATTCTGCCTG-------TTCCAAGGCACGATCGAGAACATCGCGGTGC 609 consensus_12567#0 GGCGAAAGGGCTCGTCGGCAAGAACAAGATCCACATGTACGGCCCGGTGAAGCGCAGGAC 720 consensus_12567#2 TGAAGCAGCAGTACGGGTTGCA--CAACAAGGGCTCCACCGAGATCAACATCATCAT-CG 278 consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 TGAAGCAGCAGTACGGGTTGCA--CAACAAGGGCTCCACCGAGATCAACATCATCAT-CG 666 consensus_12567#0 GAGATCGGTGATGCCATTGGCGTTCTGGAGGAACTCCCTGATGCTGGGGATCAAGAAGCG 780 consensus_12567#2 AGGCTTACAGGACATTGAGAGACAGGGGACCTTACCCTGCGGATCAAGTCGTCAGAGACA 338 consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 AGGCTTACAGGACATTGAGAGACAGGGGACCTTACCCTGCGGATCAAGTCGTCAGAGACA 726 consensus_12567#0 CAGCCTCCTGCGCTCTATGGCCGGGAACAGCTCGTCCCCTTG--CAGGGAGCCAATGGCG 838 consensus_12567#2 TCAACGGCAAGTTCGCGTTCGTGCTCTACGATTGCTCCAACA-ACTCCGTCTTCATGGC- 396 consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 TCAACGGCAAGTTCGCGTTCGTGCTCTACGATTGCTCCAACA-ACTCCGTCTTCATGGC- 784 consensus_12567#0 TGCTCGAGGCTCACGCGCTGGAGGTACGGCGCGGCGTCGGGGTGCGTCAGAAACACGGCG 898 consensus_12567#2 -CACCGATGCTGATGGTAGCGTTCCATTTTATTGGGGAGTTGATCCTGACAGCCGTCTTG 455 consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 -CACCGATGCTGATGGTAGCGTTCCATTTTATTGGGGAGTTGATCCTGACAGCCGTCTTG 843 consensus_12567#0 TCTCCATTGCTGGCGAGGCTCTCCAGCATGGGGAGCGACCTGATCTCGACCGCCATGTAG 958 consensus_12567#2 TGGTTTCTGATGATGA-----CGAAATTGTGAATAAGGCTTGTGGAAAATCCTCTGCACC 510 consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 TGGTTTCTGATGATGA-----CGAACTTGTGAATAAGGCTTGTGGAAAATCCTCTGCACC 898 consensus_12567#0 CCGCCGTCGACGACGAGCTCCCTGATCCGCGACATCGGCGCGTCCAAGGTGAGCGGGCAC 1018 consensus_12567#2 ATTCCCTAAAGGTTTCTTCTTCACCACATCCGGAGGACTGCAGAGCTACGAACACCCTAT 570 consensus_12567#3 --------AAGGTTTCTTCTTCACCACATCCGGAGGACTGCAGAGCTACGAACACCCTAT 52 consensus_12567#1 ATTCTCTAGAGGTTTCTTCTTCACCACATCCGGAGGACTGCAGAGCTACGAACACCCTAT 958 consensus_12567#0 CCGAATTTCCGGGACCTGCAGGAGCTGAGATGCAGGGAT-TGCAGCTGCGGGCACGCGGC 1077 ** ** * * * * * *** * **** ** *** * consensus_12567#2 GA--ATGAGGTGAAACCAGTGCCGAGGCTCG-ACAGCAA-----GGGGGAGGTATGCGGC 622 consensus_12567#3 GA--ATGAGGTGAAACCAGTGCCGAGGCTCG-ACAGCAA-----GGGGGAGGTAT-CGGC 103 consensus_12567#1 GA--ATGAGGTGAAACCAGTGCCGAGGCTCG-ACAGCAA-----GGGGGAGGTACGCGGC 1010 consensus_12567#0 GACCACGCGGTACACGGCGGGCCGCGTCGAGCACGGCAATCCTTGCAGGACGAGAGTGGC 1137 ** * * *** * * **** * * * ** **** * *** * *** consensus_12567#2 ACAACGTACACGGTCGACGCGAAGGCGAAGAAGGATAGCAGCA-TTCCTAGAGTT----G 677 consensus_12567#3 ACAACGTACACGGTCGACGCGAAGGCGAAGAAGGATA-CAGCACTTCCTAGAGTT----G 158 consensus_12567#1 ACAACGTACACGGTCGACGCGAAGGCGAAGAAGGATAGCAGCA-TTCCTAGAGTT----G 1065 consensus_12567#0 G-AGCGAGCCAAACCCCTGCAGCGGAGGGGGCAGGCAGTTGCGAAGCTTGAGCCTCCGCA 1196 * ** * * ** ** * * * * ** * * * consensus_12567#2 GCAGCGCTGCGGATTGGTCCTCGC-AATACTAAAACCGTATAAATCGTCAGAAGCATATG 736 consensus_12567#3 -CAGCGCTGCGGATTGGTCCTCGC-AATACTAAA-CCGTATAAATCGTCAGAAGCATATG 215 consensus_12567#1 GCAGCGCTGCGGATTGGTCCTCGC-AATACTAAAACCGTATAAATCGTCAGAAGCATATG 1124 consensus_12567#0 GCCGCGACGCGCCGGGGTCGCGGCTGATGCGGCGAAGGGGGAAGCTGTAGACCGGCGGCG 1256 * *** *** **** ** ** * * ** ** * * consensus_12567#2 GTATGATGACCTAGAA-ACCTTTGCTGCAATTACATGGAGAGCACTAGGCTTCCGGG--T 793 consensus_12567#3 GTATGATGACCTAGAA-ACCTTTGCT-CAATTACATGGAGAGCACTAGGCTTCCGGG--T 271 consensus_12567#1 GTATGATGACCTAGAA-ACCTTTGCTGCAATTACATGGAGAGCCCTAGGCTTCCGGG--T 1181 consensus_12567#0 GGTGCATGATCGGCCCCGTCGGCACGGCGGACACCTCGAGGTCCGTGACGCCCCAGGAAT 1316 * **** * * * * ** * *** * * ** ** * consensus_12567#2 TGTCCACGGTTACAAGTGGGCATTTGC------------CATCTGAAATGTTCATCTGGA 841 consensus_12567#3 TGTCCACGGTTACAAGTGGGCATTTGC------------CATCTGAAATGTTCATCTGGA 319 consensus_12567#1 TGTCCACGGTTACAAGTGGGCATTTGC------------CATCTGAAATGTTTATCTGGA 1229 consensus_12567#0 CGACGGCGGTGACGACCAGCTGGTTGATGCAGGGGGAGGCGTCGAAGTCGAACACCTCCA 1376 * * **** ** * * *** * ** * * * ** * consensus_12567#2 TGGTCAGCCTTGTGCTGTGCTGCTGT-CTGAAATTTCTGTCCTGTCCACCATTACTGAAG 900 consensus_12567#3 TGGTCAGCCTTGTGCTGTGCTGCTGT-CTGAAATTTCTGTCCTGTCCACCATTACTGAAG 378 consensus_12567#1 TGGTCAGCCTTGTGCTGTGCTGCTGT-CTGAAATTTCTGTCCTGTCCCCCATTACTGAAG 1288 consensus_12567#0 GCGACAGCCTGGTCGCACGCCGGCGAGCCGCCAAGAGGGCCCTGACGGAGCCGGCCATGG 1436 * ****** ** ** * * * * * * **** * * * consensus_12567#2 AATGAGAGCGTGTGGGTCTTGAATT-TCCAATAA-AACGCAATGCCTTACAGATGTGTAA 958 consensus_12567#3 AATGAGAGCGTGTGGGTCTTGAATT-TCCAATAA-AACGCAATGCCTTACAGATGTGTAA 436 consensus_12567#1 AATGAGAGCGTGTGGGTCTTGAATT-TCCAATAA-AAAAAAAAAAAAA------------ 1334 consensus_12567#0 CGCGCATG-GCGCGGCGCTCGTACCGCCCGGTGGCGGCGTCTAGCCTCGCGCAT-TCTCC 1494 * * * * ** ** * * ** * consensus_12567#2 ATAGATGTTTTTGCTTACTACAATATTTTCTGAACAATCAGCATATCTATAACTGTGGCT 1018 consensus_12567#3 ATAGATGTTTTTGCTTACTACAATATTTTCTGAACAATCAGCATATCTATAACTGTGGCT 496 consensus_12567#1 ------------------------------------------------------------ consensus_12567#0 TCGCGCGCGGTGACCGACCTCCTGGCCTTGCCGCGGAT-GGCAAGGCACCGGCGGTAGCG 1553 consensus_12567#2 AGAATGAATCATCTCTAACGATGTGTGTTCTGTTACTTCTGTATGTGAAGTGATCTTCC- 1077 consensus_12567#3 AGAATGAATCATCTCTAAAAAAAAAAAAANAAA--------------------------- 529 consensus_12567#1 ------------------------------------------------------------ consensus_12567#0 CGGCGGCAGCAGGTCGGTGACTCGGAAATCGAGGGCGGGGAGCTCGCGCGGGACGGCCGC 1613 consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 ------------------------------------------------------------ consensus_12567#0 CCAGCGCCTTGACAGCGCGGCGGTGGCGAGCGCGTCGCGGGTGTCGAGGCGGCGCAGGAT 1673 consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 ------------------------------------------------------------ consensus_12567#0 GAGGTGGAGCAGGTCGTCCGGGAGAGCGCTGAGGCGGTCCTCGCCGCAGGCTCGCCGTCG 1733 consensus_12567#2 ------------------------------------------------------------ consensus_12567#3 ------------------------------------------------------------ consensus_12567#1 ------------------------------------------------------------ consensus_12567#0 CCGCCGATCCTTGTTGCTCCTAGTCCTAGCCATCGGAGAACAACCCCCCAAGTGGAGTAG 1793 consensus_12567#2 -------------------------------------------- consensus_12567#3 -------------------------------------------- consensus_12567#1 -------------------------------------------- consensus_12567#0 TATTGCTCTTGCTCTGCTCTAATTTCTAAAATTCAGTGATGATT 1837 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||