These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12572#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1648 fasta sequence [CGCCGCCCAAAGTGCGACCGAAGAGAGAGAGAGAAATCCTCGGCGCTTCTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGTCAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGT-CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGCCAGTTCAGACAAAAGCATGCATGTTGCTGAAGAAGCAGCTACTGAGATGGCTTTTGTTTCGTCCACCGTACTTTTTCCCTGCAATCTACTGTGGTGCTCATCATGGTAATAAAAAAAAAAA] [+] EMBL AK064365 [CGCCGCCCAAAGTGCGACCGAAGAGAGAGAGAGAAATCCTCGGCGCTTCTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAATGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGTCAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGT CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGC ] [+] EMBL CB663602 [ ACCGAAGAGAGAGAGAGAAATCCTCGGCGCTTCTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGTCAAAGTTATTTCTTGACTTTGT AAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGG ] [+] EMBL CB668926 [ cctGCGCTTCTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGGGGGGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCGTGAAAATTCCATTGGTCGTGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAGGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAAGAGAGGCAGTAACATATGAGAAGGGAGATGCTTCAGAAACAACTGGCAGCGTAGAAAAAGACTCAGTTTCACCTCACTCCGAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGCTCGAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACA ] [+] EMBL AK101845 [ CTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGTCAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGT CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATG ] [+] EMBL CB668954 [ cgggccCTTCATGGCGGCGGCGGNGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGGCAAAGTTATTTCTTGACTTT ] [+] EMBL AU068233 [ AAGCCCGAAATCGANNCCCCACCGCCGGCCCGCGAGCCTCCAACTGANCCACCANCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGC ] [-] EMBL CB663603 [ ACTACATACTACTGTGTCAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGT CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGCC ] [+] EMBL CF323491 [ CAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTT AGTGGCTGGGGTGT CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAA ] [-] EMBL CB668955 [ AAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGT CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTTTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTCCTGTAAAGTGAACTTTATCTATTA ] [+] EMBL AU068232 [ AGATGCTCCCTATTNCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGNTGTCCCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATNCAATTTGATCAGTCTNCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGCCAGTTCAGACAAAAGCATGCATGTTGCTGAAGAAGCAGCTACTGAGATGGCTTTTGTTTCGTCCACCGTACTTTTTCCCTGCAATCTACTGTGGTGCTCATCATGGTAATAAAAAAAAAAA] [+] EMBL BE040294 [ T CCGTTGTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCGTGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGCCAGTTCAGACAAAAGCATGCATGTTGCTGAAGAAGCAGCTACTGAGATGGCTTTTGTTTCGTCCACCGTACTTTTTCCCTGCAAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||