|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12572#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1648 fasta sequence
[CGCCGCCCAAAGTGCGACCGAAGAGAGAGAGAGAAATCCTCGGCGCTTCTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGTCAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGT-CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGCCAGTTCAGACAAAAGCATGCATGTTGCTGAAGAAGCAGCTACTGAGATGGCTTTTGTTTCGTCCACCGTACTTTTTCCCTGCAATCTACTGTGGTGCTCATCATGGTAATAAAAAAAAAAA]
[+] EMBL AK064365 [CGCCGCCCAAAGTGCGACCGAAGAGAGAGAGAGAAATCCTCGGCGCTTCTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAATGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGTCAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGT CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGC ]
[+] EMBL CB663602 [ ACCGAAGAGAGAGAGAGAAATCCTCGGCGCTTCTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGTCAAAGTTATTTCTTGACTTTGT AAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGG ]
[+] EMBL CB668926 [ cctGCGCTTCTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGGGGGGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCGTGAAAATTCCATTGGTCGTGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAGGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAAGAGAGGCAGTAACATATGAGAAGGGAGATGCTTCAGAAACAACTGGCAGCGTAGAAAAAGACTCAGTTTCACCTCACTCCGAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGCTCGAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACA ]
[+] EMBL AK101845 [ CTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGTCAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGT CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATG ]
[+] EMBL CB668954 [ cgggccCTTCATGGCGGCGGCGGNGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGGCAAAGTTATTTCTTGACTTT ]
[+] EMBL AU068233 [ AAGCCCGAAATCGANNCCCCACCGCCGGCCCGCGAGCCTCCAACTGANCCACCANCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAGAAGGGTGATGC ]
[-] EMBL CB663603 [ ACTACATACTACTGTGTCAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGT CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGCC ]
[+] EMBL CF323491 [ CAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTT AGTGGCTGGGGTGT CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAA ]
[-] EMBL CB668955 [ AAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGT CCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTTTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTCCTGTAAAGTGAACTTTATCTATTA ]
[+] EMBL AU068232 [ AGATGCTCCCTATTNCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGNTGTCCCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATNCAATTTGATCAGTCTNCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGCCAGTTCAGACAAAAGCATGCATGTTGCTGAAGAAGCAGCTACTGAGATGGCTTTTGTTTCGTCCACCGTACTTTTTCCCTGCAATCTACTGTGGTGCTCATCATGGTAATAAAAAAAAAAA]
[+] EMBL BE040294 [ T CCGTTGTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGATGGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTTACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCTTCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTTGGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCTCTTGGAGGGTACTTCTTGTCGTTATTTTTGCGTGTTGCGATGTCAAAACCATGAGGTCGCTGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGCCAGTTCAGACAAAAGCATGCATGTTGCTGAAGAAGCAGCTACTGAGATGGCTTTTGTTTCGTCCACCGTACTTTTTCCCTGCAAaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||