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Oryza sativa
cluster # 12578 cluster # 12578       Sequences # 11       consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12578#0 length = 2820 sequences # 7  
consensus_12578#1 length = 798 sequences # 1  
 consensus_12578#2 length = 705 sequences # 1  
consensus_12578#3 length = 558 sequences # 1  
consensus_12578#4 length = 497 sequences # 1  
consensusID : consensus_12578#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2820
fasta sequence 
                              [TCGAGAAAAACAGATTGGTTTTACTATCTCGTTAACAACTTAATTAAGCCTTGCGCGTTGAGAAAAACAACACTAGACATTTTTTGGGTGCTGCTTCTAGTATCAAAGTTCTCAGTAATCAGTTCAAACTTAGAACCTCAATGAAGAATGCTAACAGTTGCACAACTAGTAGGGAAGTTATTACCATCTTGCTCCTGTCCTTCTAAGTCAAACACTTAGTAAATCGTTGACATCAATTTCTAGTAATTTGTGCAATTTAACAACGATTTTGCTATATCTCACTTGAAAGTTTTTTTCTTATCTCTCACTTGATTTTCTCACTCAAATTTACAGTGCATTTTCTTGTAAGTTACAGTGTAATTTATGAAACTTACACTGTAACTTTTGTAAGTTACACTGTAATTTTTGAATCTTCGCATGTAAATTTTAAATTTTGTATTGGATTTGGTCTTTTTCTTGAGGATATGGTAATTTAGTGTCCATTATGGTGTTTCTTAATTGTTTTTTGCTTTTTATTAAATCTATCGGATTTTAATCCAAAGATTAAAAATCTGTGTGATACGATCATAAAAATCTTTTGAAAGATGTATAGGTACTCCCATTTAACAACACGTAAATTGTATGTTATGAAAGCATTTCTCATGGTGCATCTTAAAAACGTAATCTTATTACGTTAAACTATATTAACATGAATTTTTATAAATTAATGGTCAAAGGTATTCACCTTTGATTTAGGACAAAGCTAAAACGGCAAGTAATTTAAAACGAAGCAAGTACCTTTATGTAAGTCTGTTCTCCTGAGTTTGGTATTAATGAATCGTACATATGTGAATACATATGCACCTTGTATAGTTGGCATGTAATGCGGTTCTTGAGCAAATCTTTGTAATTTGTCGAGTAGAAACTGTTTTTGACAAGTAGACGTGTCAATTATTGAATCATAGTATTATTGCTTTCCTAGAAATAATTGCTCAATTATTGCAAGGAGTACTAGTATTTATCAGACAACCTGAAAGAGACATGGTCTTATCGCAAAAGAAAATGAGGATAGAAAAACTGTGGCTGGTGTATTTAGCAGATCGATCATATGGTAACAGCCTAGATTTTTATTGATATCTAATCTGCCTCAGTACTAAAGCGTTTGTCAGCCTGAATTCCAGATTGGCAGAAAAGAGACTTTACCATGCAATGCAGGATGAGGGCTTGCCCACAGGTCCATGTCAAGATGCCCTGAACCAGAGTTAAGCTTGCCATTGGAGAACCTAAAACGTCACAGTCCAAACTTCCAATATCTTTCTGAAGCAATGACAGAAATTCTTGTGTCCCAGGCTCCCAGCCAATTTGTTAAAACTTTCTTATGCCGGCTTTCACATCGTAGTTGCTGAGTCCTACTTCAGACAGGAACACCAATGCAACTATGCAAATAGCATTCTGGCAAATCATGTTCTTTTCTTTTTGCCATGTCTGATATTTCTTGAATAATCCACTAGCAGCATCTTCTGCCGATGGCAACCACTGGTTCTACGGAGATAAAAGTCCAGATTTGTCGGCCTATTTGTTTGTTCTGTTCATCGATTAGTGGTAGTGAACTAGTGGCCAGGCATTCTTCTGTACTAGTTCACAAACCTGACATGCATGCAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGGACAGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTCAAGAGGGACCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACTTTGTTGACAGCCCCAGGTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTGAAGACATGTCTCTGCGTCAGTGCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCACCAGCTTCTGACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCAGAAACTCCCTGCCGGCCAGCTTGAGCAACCGGCCTCGCAAGATATCTTCTTAGAACAGCTCAAGAAGCTCCTGAGCAACATCGCTGAAAGGCTTCAGGAGCAGCCTGTGATTGTCGCACACACCGAGAACACATTCGACGGTAGTTGTGTCAAGAGGCTGCTGGACAACAAATTCGAGCTGGACAAGTTGTTGGATTCTGTCTGGAAAGATGTACTCATAGAGCATAAGAACAAAGGATCCAGGGAGTGCCTGATAGCCGCACTCGATAAGATGGCAGATGCAGCAGGCTTACCACCTTACGGTGCCGTTAATCAGGTGGATGCCGTGGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGAAAGAACAGCGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTTAGGGCAGTGATGATGCAGCTGAACAGACAGCCGATTTTCGTCTCGAACAGCACCGTAGTTCACGAGCCATTGTTCAGTTCATCCGCAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTGAATAAATTAAACCATATATGAATGTTAATGTGCTTGACAGTGGTCTATCTGTAAGCAGTGCCTGTGATGTTGCTTTTTTGTCTGATCAAGCACTGCGGGGGCATGTATAGACTGGCTACAACCTGACGAGATGTAAAGAACACTTCCGTCAGTCTTGCTAGCCTGATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAATGGCAAATGCAACTATTTTGCAGTTTGCATTCATTGGGGGACTGTTTATTCTCCAGGAACTGTTCAGCTCTCTAATGATAAGGTTTACTATTTAGT]

[+] EMBL AK121051             [TCGAGAAAAACAGATTGGTTTTACTATCTCGTTAACAACTTAATTAAGCCTTGCGCGTTGAGAAAAACAACACTAGACATTTTTTGGGTGCTGCTTCTAGTATCAAAGTTCTCAGTAATCAGTTCAAACTTAGAACCTCAATGAAGAATGCTAACAGTTGCACAACTAGTAGGGAAGTTATTACCATCTTGCTCCTGTCCTTCTAAGTCAAACACTTAGTAAATCGTTGACATCAATTTCTAGTAATTTGTGCAATTTAACAACGATTTTGCTATATCTCACTTGAAAGTTTTTTTCTTATCTCTCACTTGATTTTCTCACTCAAATTTACAGTGCATTTTCTTGTAAGTTACAGTGTAATTTATGAAACTTACACTGTAACTTTTGTAAGTTACACTGTAATTTTTGAATCTTCGCATGTAAATTTTAAATTTTGTATTGGATTTGGTCTTTTTCTTGAGGATATGGTAATTTAGTGTCCATTATGGTGTTTCTTAATTGTTTTTTGCTTTTTATTAAATCTATCGGATTTTAATCCAAAGATTAAAAATCTGTGTGATACGATCATAAAAATCTTTTGAAAGATGTATAGGTACTCCCATTTAACAACACGTAAATTGTATGTTATGAAAGCATTTCTCATGGTGCATCTTAAAAACGTAATCTTATTACGTTAAACTATATTAACATGAATTTTTATAAATTAATGGTCAAAGGTATTCACCTTTGATTTAGGACAAAGCTAAAACGGCAAGTAATTTAAAACGAAGCAAGTACCTTTATGTAAGTCTGTTCTCCTGAGTTTGGTATTAATGAATCGTACATATGTGAATACATATGCACCTTGTATAGTTGGCATGTAATGCGGTTCTTGAGCAAATCTTTGTAATTTGTCGAGTAGAAACTGTTTTTGACAAGTAGACGTGTCAATTATTGAATCATAGTATTATTGCTTTCCTAGAAATAATTGCTCAATTATTGCAAGGAGTACTAGTATTTATCAGACAACCTGAAAGAGACATGGTCTTATCGCAAAAGAAAATGAGGATAGAAAAACTGTGGCTGGTGTATTTAGCAGATCGATCATATGGTAACAGCCTAGATTTTTATTGATATCTAATCTGCCTCAGTACTAAAGCGTTTGTCAGCCTGAATTCCAGATTGGCAGAAAAGAGACTTTACCATGCAATGCAGGATGAGGGCTTGCCCACAGGTCCATGTCAAGATGCCCTGAACCAGAGTTAAGCTTGCCATTGGAGAACCTAAAACGTCACAGTCCAAACTTCCAATATCTTTCTGAAGCAATGACAGAAATTCTTGTGTCCCAGGCTCCCAGCCAATTTGTTAAAACTTTCTTATGCCGGCTTTCACATCGTAGTTGCTGAGTCCTACTTCAGACAGGAACACCAATGCAACTATGCAAATAGCATTCTGGCAAATCATGTTCTTTTCTTTTTGCCATGTCTGATATTTCTTGAATAATCCACTAGCAGCATCTTCTGCCGATGGCAACCACTGGTTCTACGGAGATAAAAGTCCAGATTTGTCGGCCTATTTGTTTGTTCTGTTCATCGATTAGTGGTAGTGAACTAGTGGCCAGGCATTCTTCTGTACTAGTTCACAAACCTGACATGCATGCAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGGACAGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTCAAGAGGGACCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACTTTGTTGACAGCCCCAGGTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTGAAGACATGTCTCTGCGTCAGTGCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCACCAGCTTCTGACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCAGAAACTCCCTGCCGGCCAGCTTGAGCAACCGGCCTCGCAAGATATCTTCTTAGAACAGCTCAAGAAGCTCCTGAGCAACATCGCTGAAAGGCTTCAGGAGCAGCCTGTGATTGTCGCACACACCGAGAACACATTCGGCGGTAGTTGTGTCAAGAGGCTGCTGGACAACAAATTCGAGCTGGACAAGTTGTTGGATTCTGTCTGGAAAGATGTACTCATAGAGCATAAGAACAAAGGATCCAGGGAGTGCCTGATAGCCGCACTCGATAAGATGGCAGATGCAGCAGGCTTACCACCTTACGGTGCCGTTAATCAGGTGGATGCCGTGGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGAAAGAACAGCGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTTAGGGCAGTGATGATGCAGCTGAACAGACAGCCGATTTTCGTCTCGAACAGCACCGTAGTTCACGAGCCATTGTTCAGTTCATCCGCAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTGAATAAATTAAACCATATATGAATGTTAATGTGCTTGACAGTGGTCTATCTGTAAGCAGTGCCTGTGATGTTGCTTTTTTGTCTGATCAAGCACTGCGGGGGCATGTATAGACTGGCTACAACCTGACGAGATGTAAAGAACACTTCCGTCAGTCTTGCTAGCCTGATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAATGGCAAATGCAACTATTTTGCAGTTTGCAT                                                                  ]
[+] EMBL CF303912             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCTTATCGCAAAAGAAAATGAGGATAGAAAAACTGTGGCTGGTGTATTTAGCAGATCGATCATATGGTAACAGCCTAGATTTTTATTGATATCTAATCTGCCTCAGTACTAAAGCGTTTGTCAGCCTGAATTCCAGATTGGCAGAAAAGAGACTTTACCATGCAATGCAGGATGAGGGCTTGCCCACAGGTCCATGTCAAGATGCCCTGAACCAGAGTTAAGCTTGCCATTGGAGAACCTAAAACGTCACAGTCCAAACTTCCAATATCTTTCTGAAGCAATGACAGAAATTCTTGTGTCCCAGGCTCCCAGCCAATTTGTTAAAACTTTCTTATGCCGGCTTTCACATCGTAGTTGCTGAGTCCTACTTCAGACAGGAACACCAATGCAACTATGCAAATAGCATTCTGGCAAATCATGTTCTTTTCTTTTTGCCATGTCTGATATTTCTTGAATAATCCACTAGCAGCATCTTCTGCCGATGGCAACCACTGGTTCTACGGAGATAAAAGTCCAGATTTGTCGGCCTATTTGTTTGTTCTGTTCATCGATTAGTGGTAGTGAACTAGTGGCCAGGCATTCTTCTGTACTAGTTCACAAACCTGACATGCATGCAGGCAATCAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK061120             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTGTACTAGTTCACAAACCTGACATGCATGCAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGGACAGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTCAAGAGGGACCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACTTTGTTGACAGCCCCAGGTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTGAAGACATGTCTCTGCGTCAGTGCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCACCAGCTTCTGACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCAGAAACTCCCTGCCGGCCAGCTTGAGCAACCGGCCTCGCAAGATATCTTCTTAGAACAGCTCAAGAAGCTCCTGAGCAACATCGCTGAAAGGCTTCAGGAGCAGCCTGTGATTGTCGCACACACCGAGAACACATTCGACGGTAGTTGTGTCAAGAGGCTGCTGGACAACAAATTCGAGCTGGACAAGTTGTTGGATTCTGTCTGGAAAGATGTACTCATAGAGCATAAGAACAAAGGATCCAGGGAGTGCCTGATAGCCGCACTCGATAAGATGGCAGATGCAGCAGGCTTACCACCTTACGGTGCCGTTAATCAGGTGGATGCCGTGGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGAAAGAACAGCGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTTAGGGCAGTGATGATGCAGCTGAACAGACAGCCGATTTTCGTCTCGAACAGCACCGTAGTTCACGAGCCATTGTTCAGTTCATCCGCAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTGAATAAATTAAACCATATATGAATGTTAATGTGCTTGACAGTGGTCTATCTGTAAGCAGTGCCTGTGATGTTGCTTTTTTGTCTGATCAAGCACTGCGGGGGCATGTATAGACTGGCTACAACCTGACGAGATGTAAAGAACACTTCCGTCAGTCTTGCTAGCCTGATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAA                                                                                                ]
[+] EMBL CB684201             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTGCGTCAGTGCCTGCTAACTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCACCAGCTTCTGACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCACAAACTCCCTGCCGGCCATCTTGAGCAACCGGCCTCGCAAGATATCTTCTTAGAACGGCTCAAGAAGCTCCTGAGCAACATCGCTGAGAGGCTTCAGGAGCAGCCTGTGATTGTCGCACACACCGAGAACACATTCCACGGTAGTTGTGTCAAGAGGCTGCTGGACAACAAATTCAAGCTGGACAAGATGATGGATTCTGTCTGGAAAGATGTACTCATAGAGCATAAGAACAAAGGATCCAGGGAGTGCCTGATAGCCGCACTCAATAACATGGCAGATGCAGCATGCTTACCACCTTACGGTGCCGTTAATCACGTGGATGCCGTGGTGAATGACGCGCTCAAGACAGTTAATGCTGATGAAAGAACAGCGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTTACGGC                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB684202             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCTGAAAGGCTTCAGGAGCAGCCTGTGATTGTCGCACACACCGAGAACACATTCGACGGTAGTTGTGTCAAGAGGCTGCTGGACAACAAATTCGAGCTGGACAAGTTGTTGGATTCTGTCTGGAAAGATGTACTCATAGAGCATAAGAACAAAGGATCCAGGGAGTGCCTGATAGCCGCACTCGATAAGATGGCAGATGCAGCAGGCTTACCACCTTACGGTGCCGTTAATCAGGTGGATGCCGTGGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGAAAGAACAGCGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTTAGGGCAGTGATGATGCAGCTGAACAGACAGCCGATTTTCGTCTCGAACAGCACCGTAGTTCACGAGCCATTGTTCAGTTCATCCGCAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTGAATAAATTAAACCATATATGAATGTTAATGTGCTTGACAGTGGTCTATCTGTAAGCAGTGCCTGTGATGTTGCTTTTTTGTCTGATCAAGCACTGCGGGGGCATGTATAGACTGGCTACAACCTGACGAGATGTAAAGAACACTTCCGTCAGTCTTGCTAGCCTGATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAATGGCAAATGCAACTATTTTGCAGTTTGCATTCATTGGGGGACTGTTTATTCTCCAGGAACTGTTCAGCTCTCTAATGATAAGGTTTACTATTTAGT]
[-] EMBL CB680332             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGAAAGGCTTCAGGAGCAGCCTGTGATTGTCGCACACACCGAGAACACATTCGACGGTAGTTGTGTCAAGAGGCTGCTGGACAACAAATTCGAGCTGGACAAGTTGTTGGATTCTGTCTGGAAAGATGTACTCATAGAGCATAAGAACAAAGGATCCAGGGAGTGCCTGATAGCCGCACTCGATAAGATGGCAGATGCAGCAGGCTTACCACCTTACGGTGCCGTTAATCAGGTGGATGCCGTGGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGAAAGAACAGCGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTTAGGGCAGTGATGATGCAGCTGAACAGACAGCCGATTTTCGTCTCGAACAGCACCGTAGTTCACGAGCCATTGTTCAGTTCATCCGCAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTGAATAAATTAAACCATATATGAATGTTAATGTGCTTGACAGTGGTCTATCTGTAAGCAGTGCCTGTGATGTTGCTTTTTTGTCTGATCAAGCACTGCGGGGGCATGTATAGACTGGCTACAACCTGACGAGATGTAAAGAACACTTCCGTCAGTCTTGCTAGCCTGATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAATGGCAAATGCAACTATTTTGCAGTTTGCATTCATTGGGGGACTGT                                                   ]
[-] EMBL CB680399             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGATGCAGCAGGCTTACCACCTTCCGGTGCCGTTAATCAGGTGGATTCCGTGGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGCAAGATCAGCGGTAGATGAGGCCGGGTTCAAGAAAATACTGACAGATATCCTTAGGGCAGTGATGATGCAGCTGAACAGACAGCCGATTTTCGTCTCGAACAGCGCTGTAGTTCACGAGCCATTGTTCAGTTCATCCGCAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTGAATAAATTAAACCATATATGAATGTTAATGTGCTTGACAGTGGTCTATCTGTAAGCAGTGCCTGTGATGTTGCTTTTTTGTTTGATCAAGCATTGCGGGGGCATGTATAGATTGGTTCCACCCTGTCGAGATGTAAAGAACACTTCCGTCAGTCTTGTTAGCCTGATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAATGGCAAATGCAACTATTTTGCAGTTTGCATTCATTGGGGGTTTG AGGTTCTCCAGGATCT                                   ]




>consensus_12578#0
TCGAGAAAAACAGATTGGTTTTACTATCTCGTTAACAACTTAATTAAGCCTTGCGCGTTG
AGAAAAACAACACTAGACATTTTTTGGGTGCTGCTTCTAGTATCAAAGTTCTCAGTAATC
AGTTCAAACTTAGAACCTCAATGAAGAATGCTAACAGTTGCACAACTAGTAGGGAAGTTA
TTACCATCTTGCTCCTGTCCTTCTAAGTCAAACACTTAGTAAATCGTTGACATCAATTTC
TAGTAATTTGTGCAATTTAACAACGATTTTGCTATATCTCACTTGAAAGTTTTTTTCTTA
TCTCTCACTTGATTTTCTCACTCAAATTTACAGTGCATTTTCTTGTAAGTTACAGTGTAA
TTTATGAAACTTACACTGTAACTTTTGTAAGTTACACTGTAATTTTTGAATCTTCGCATG
TAAATTTTAAATTTTGTATTGGATTTGGTCTTTTTCTTGAGGATATGGTAATTTAGTGTC
CATTATGGTGTTTCTTAATTGTTTTTTGCTTTTTATTAAATCTATCGGATTTTAATCCAA
AGATTAAAAATCTGTGTGATACGATCATAAAAATCTTTTGAAAGATGTATAGGTACTCCC
ATTTAACAACACGTAAATTGTATGTTATGAAAGCATTTCTCATGGTGCATCTTAAAAACG
TAATCTTATTACGTTAAACTATATTAACATGAATTTTTATAAATTAATGGTCAAAGGTAT
TCACCTTTGATTTAGGACAAAGCTAAAACGGCAAGTAATTTAAAACGAAGCAAGTACCTT
TATGTAAGTCTGTTCTCCTGAGTTTGGTATTAATGAATCGTACATATGTGAATACATATG
CACCTTGTATAGTTGGCATGTAATGCGGTTCTTGAGCAAATCTTTGTAATTTGTCGAGTA
GAAACTGTTTTTGACAAGTAGACGTGTCAATTATTGAATCATAGTATTATTGCTTTCCTA
GAAATAATTGCTCAATTATTGCAAGGAGTACTAGTATTTATCAGACAACCTGAAAGAGAC
ATGGTCTTATCGCAAAAGAAAATGAGGATAGAAAAACTGTGGCTGGTGTATTTAGCAGAT
CGATCATATGGTAACAGCCTAGATTTTTATTGATATCTAATCTGCCTCAGTACTAAAGCG
TTTGTCAGCCTGAATTCCAGATTGGCAGAAAAGAGACTTTACCATGCAATGCAGGATGAG
GGCTTGCCCACAGGTCCATGTCAAGATGCCCTGAACCAGAGTTAAGCTTGCCATTGGAGA
ACCTAAAACGTCACAGTCCAAACTTCCAATATCTTTCTGAAGCAATGACAGAAATTCTTG
TGTCCCAGGCTCCCAGCCAATTTGTTAAAACTTTCTTATGCCGGCTTTCACATCGTAGTT
GCTGAGTCCTACTTCAGACAGGAACACCAATGCAACTATGCAAATAGCATTCTGGCAAAT
CATGTTCTTTTCTTTTTGCCATGTCTGATATTTCTTGAATAATCCACTAGCAGCATCTTC
TGCCGATGGCAACCACTGGTTCTACGGAGATAAAAGTCCAGATTTGTCGGCCTATTTGTT
TGTTCTGTTCATCGATTAGTGGTAGTGAACTAGTGGCCAGGCATTCTTCTGTACTAGTTC
ACAAACCTGACATGCATGCAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTG
AGCAGGACAGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTC
AAGAGGGACCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACTTTGTTGAC
AGCCCCAGGTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTGAAGACATG
TCTCTGCGTCAGTGCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCA
CCAGCTTCTGACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCAGAAACTCCCT
GCCGGCCAGCTTGAGCAACCGGCCTCGCAAGATATCTTCTTAGAACAGCTCAAGAAGCTC
CTGAGCAACATCGCTGAAAGGCTTCAGGAGCAGCCTGTGATTGTCGCACACACCGAGAAC
ACATTCGACGGTAGTTGTGTCAAGAGGCTGCTGGACAACAAATTCGAGCTGGACAAGTTG
TTGGATTCTGTCTGGAAAGATGTACTCATAGAGCATAAGAACAAAGGATCCAGGGAGTGC
CTGATAGCCGCACTCGATAAGATGGCAGATGCAGCAGGCTTACCACCTTACGGTGCCGTT
AATCAGGTGGATGCCGTGGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGAAAGAACA
GCGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTTAGGGCAGTGATGATG
CAGCTGAACAGACAGCCGATTTTCGTCTCGAACAGCACCGTAGTTCACGAGCCATTGTTC
AGTTCATCCGCAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTGAATAAATTAAA
CCATATATGAATGTTAATGTGCTTGACAGTGGTCTATCTGTAAGCAGTGCCTGTGATGTT
GCTTTTTTGTCTGATCAAGCACTGCGGGGGCATGTATAGACTGGCTACAACCTGACGAGA
TGTAAAGAACACTTCCGTCAGTCTTGCTAGCCTGATTGATGTATAAGTTTGGAATAAGGC
TTTCAAGCTATACAGATTGATCAATGGCAAATGCAACTATTTTGCAGTTTGCATTCATTG
GGGGACTGTTTATTCTCCAGGAACTGTTCAGCTCTCTAATGATAAGGTTTACTATTTAGT

consensusID : consensus_12578#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 798
fasta sequence 
                              [GAGATACGGGAGCTGGTGGAGGACAGGGAGGCGTTCGGGATGTTCGCGGAGAGCAAGTTCCGGGAGCTCGACGCCGACGGCGACGGCAGGCTGTCCGTGCGTGAGCTGCAGCCGGCGGTGGAGGGCATCGGCGCCGCGCTCGGGCTGCCGGCGCGCGGGTCTTCGCCCAACGCCGACCACATCTACTCCGAGATTGGCAGAAAAGAGACTTTACCATGCAATGCAGGATGAGGGCTTGCCCACAGGTCCATGTCAAGATGCCCTGAACCAGAGTTAAGCTTGCCATTGGAGAACCTAAAACGTCACAGTCCAAACTTCCAATATCTTTCTGAAGCAATGACAGAAATTCTTGTGTCCCAGGCTCCCAGCCAATTTGTTAAAACTTTCTTATGCCGGCTTTCACATCGTAGTTGCTGAGTCCTACTTCAGACAGGAACACCAATGCAACTATGCAAATAGCATTCTGGCAAATCATGTTCTTTTCTTTTTGCCATGTCTGATATTTCTTGAATAATCCACTAGCAGCATCTTCTGCCGATGGCAACCACTGGTTCTACGGAGATAAAAGTCCAGATTTGTCGGCCTATTTGTTTGTTCTGTTCATCGATTAGTGGTAGTGAACTAGTGGCCAGGCATTCTTCTGTACTAGTTCACAAACCTGACATGCATGCAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGGACAGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTCAAGAGGGACCCGATCGTTATACTGCG]

[+] EMBL CB680331             [GAGATACGGGAGCTGGTGGAGGACAGGGAGGCGTTCGGGATGTTCGCGGAGAGCAAGTTCCGGGAGCTCGACGCCGACGGCGACGGCAGGCTGTCCGTGCGTGAGCTGCAGCCGGCGGTGGAGGGCATCGGCGCCGCGCTCGGGCTGCCGGCGCGCGGGTCTTCGCCCAACGCCGACCACATCTACTCCGAGATTGGCAGAAAAGAGACTTTACCATGCAATGCAGGATGAGGGCTTGCCCACAGGTCCATGTCAAGATGCCCTGAACCAGAGTTAAGCTTGCCATTGGAGAACCTAAAACGTCACAGTCCAAACTTCCAATATCTTTCTGAAGCAATGACAGAAATTCTTGTGTCCCAGGCTCCCAGCCAATTTGTTAAAACTTTCTTATGCCGGCTTTCACATCGTAGTTGCTGAGTCCTACTTCAGACAGGAACACCAATGCAACTATGCAAATAGCATTCTGGCAAATCATGTTCTTTTCTTTTTGCCATGTCTGATATTTCTTGAATAATCCACTAGCAGCATCTTCTGCCGATGGCAACCACTGGTTCTACGGAGATAAAAGTCCAGATTTGTCGGCCTATTTGTTTGTTCTGTTCATCGATTAGTGGTAGTGAACTAGTGGCCAGGCATTCTTCTGTACTAGTTCACAAACCTGACATGCATGCAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGGACAGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTCAAGAGGGACCCGATCGTTATACTGCG]




>consensus_12578#1
GAGATACGGGAGCTGGTGGAGGACAGGGAGGCGTTCGGGATGTTCGCGGAGAGCAAGTTC
CGGGAGCTCGACGCCGACGGCGACGGCAGGCTGTCCGTGCGTGAGCTGCAGCCGGCGGTG
GAGGGCATCGGCGCCGCGCTCGGGCTGCCGGCGCGCGGGTCTTCGCCCAACGCCGACCAC
ATCTACTCCGAGATTGGCAGAAAAGAGACTTTACCATGCAATGCAGGATGAGGGCTTGCC
CACAGGTCCATGTCAAGATGCCCTGAACCAGAGTTAAGCTTGCCATTGGAGAACCTAAAA
CGTCACAGTCCAAACTTCCAATATCTTTCTGAAGCAATGACAGAAATTCTTGTGTCCCAG
GCTCCCAGCCAATTTGTTAAAACTTTCTTATGCCGGCTTTCACATCGTAGTTGCTGAGTC
CTACTTCAGACAGGAACACCAATGCAACTATGCAAATAGCATTCTGGCAAATCATGTTCT
TTTCTTTTTGCCATGTCTGATATTTCTTGAATAATCCACTAGCAGCATCTTCTGCCGATG
GCAACCACTGGTTCTACGGAGATAAAAGTCCAGATTTGTCGGCCTATTTGTTTGTTCTGT
TCATCGATTAGTGGTAGTGAACTAGTGGCCAGGCATTCTTCTGTACTAGTTCACAAACCT
GACATGCATGCAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGGAC
AGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTCAAGAGGGA
CCCGATCGTTATACTGCG

consensusID : consensus_12578#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 705
fasta sequence 
                              [CATCTACTCCGAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGGACAGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTCAAGAGGGACCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACTTTGTTGACAGCCCCAGGTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTGAAGACATGTCTCTGCGTCAGTGCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCACCAGCTTCTGACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCAGAAACTCCCTGCCGGCCAGTTTGAGCAACCGGCCCTCCAAGATATCTTCTTAGACCAGCTCAAGAAGCTCCTGAGCAACATCGCTGAAAGGCTTCAGGAGCAGCCTGCGATTGCTCTACACACCGAGTACACATTTCACGGCTCCTGCGGTCAGACGCTGCTGGACACAAATTTCAGCTCGGACAGCTGTCTGGATCCTGTCTGGAAAGATGCTCTCCTAGAGCTTAACAACCAGGCATCACCGAGCGCCTCGTAGCCTCCACTCGATAATATGCGACATGCACTTATGCTTACCACCTTTACGGGGCCCTTAATCATGGGGCTACCCTGGTGAATTAAGGCCTCACAACAGTAATGCCGATT]

[+] EMBL BF430804             [CATCTACTCCGAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGGACAGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTCAAGAGGGACCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACTTTGTTGACAGCCCCAGGTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTGAAGACATGTCTCTGCGTCAGTGCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCACCAGCTTCTGACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCAGAAACTCCCTGCCGGCCAGTTTGAGCAACCGGCCCTCCAAGATATCTTCTTAGACCAGCTCAAGAAGCTCCTGAGCAACATCGCTGAAAGGCTTCAGGAGCAGCCTGCGATTGCTCTACACACCGAGTACACATTTCACGGCTCCTGCGGTCAGACGCTGCTGGACACAAATTTCAGCTCGGACAGCTGTCTGGATCCTGTCTGGAAAGATGCTCTCCTAGAGCTTAACAACCAGGCATCACCGAGCGCCTCGTAGCCTCCACTCGATAATATGCGACATGCACTTATGCTTACCACCTTTACGGGGCCCTTAATCATGGGGCTACCCTGGTGAATTAAGGCCTCACAACAGTAATGCCGATT]




>consensus_12578#2
CATCTACTCCGAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGGAC
AGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTCAAGAGGGA
CCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACTTTGTTGACAGCCCCAG
GTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTGAAGACATGTCTCTGCG
TCAGTGCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCACCAGCTTC
TGACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCAGAAACTCCCTGCCGGCCA
GTTTGAGCAACCGGCCCTCCAAGATATCTTCTTAGACCAGCTCAAGAAGCTCCTGAGCAA
CATCGCTGAAAGGCTTCAGGAGCAGCCTGCGATTGCTCTACACACCGAGTACACATTTCA
CGGCTCCTGCGGTCAGACGCTGCTGGACACAAATTTCAGCTCGGACAGCTGTCTGGATCC
TGTCTGGAAAGATGCTCTCCTAGAGCTTAACAACCAGGCATCACCGAGCGCCTCGTAGCC
TCCACTCGATAATATGCGACATGCACTTATGCTTACCACCTTTACGGGGCCCTTAATCAT
GGGGCTACCCTGGTGAATTAAGGCCTCACAACAGTAATGCCGATT

consensusID : consensus_12578#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 558
fasta sequence 
                              [CAGGCTCATCACCTTACGGTGCCGTTAATCAGGTGGATGCCGTGGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGAAAGAACAGCGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTTATGGCAGTGATGATGCAGCTGAACAGACAGCCGATTTTCGTCTCGAACAGCACCGTAGTTCACGAGCCATTGTTCAGGTCATCCGCAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTGAATAAATTAAACCATATATGAATGTTAATGTGCTTGACAGTGGTCTATCTGTAAGCAGTGCCTGTGATGTTGCTTTTTTGTCTGATCAAGCACTGCGGGGGCATGTATAGACTGGCTACAACCTGACGAGATGTAAAGAACACTTCCGTCAGTCTTGCTAGCCTGATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAATGGCAAATGCAACTATTTTGCAGTTTGCATTCATTGGGGGACTGTTTATTCTCCAGGAACTGTTCAGCTCTCTAAACCAGCAAGCCCG]

[+] EMBL CB680398             [CAGGCTCATCACCTTACGGTGCCGTTAATCAGGTGGATGCCGTGGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGAAAGAACAGCGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTTATGGCAGTGATGATGCAGCTGAACAGACAGCCGATTTTCGTCTCGAACAGCACCGTAGTTCACGAGCCATTGTTCAGGTCATCCGCAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTGAATAAATTAAACCATATATGAATGTTAATGTGCTTGACAGTGGTCTATCTGTAAGCAGTGCCTGTGATGTTGCTTTTTTGTCTGATCAAGCACTGCGGGGGCATGTATAGACTGGCTACAACCTGACGAGATGTAAAGAACACTTCCGTCAGTCTTGCTAGCCTGATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAATGGCAAATGCAACTATTTTGCAGTTTGCATTCATTGGGGGACTGTTTATTCTCCAGGAACTGTTCAGCTCTCTAAACCAGCAAGCCCG]




>consensus_12578#3
CAGGCTCATCACCTTACGGTGCCGTTAATCAGGTGGATGCCGTGGTGAATGAGGCGCTCA
AGACAGTTAATGCTGATGAAAGAACAGCGGTAGACGAGGCCGGGTTCAAGAAACTACTGA
CAGATATCCTTATGGCAGTGATGATGCAGCTGAACAGACAGCCGATTTTCGTCTCGAACA
GCACCGTAGTTCACGAGCCATTGTTCAGGTCATCCGCAATTTTATCCTCGCCTCCAGTGA
AATCATCGCCGAGTGAATAAATTAAACCATATATGAATGTTAATGTGCTTGACAGTGGTC
TATCTGTAAGCAGTGCCTGTGATGTTGCTTTTTTGTCTGATCAAGCACTGCGGGGGCATG
TATAGACTGGCTACAACCTGACGAGATGTAAAGAACACTTCCGTCAGTCTTGCTAGCCTG
ATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAATGGCAAATGC
AACTATTTTGCAGTTTGCATTCATTGGGGGACTGTTTATTCTCCAGGAACTGTTCAGCTC
TCTAAACCAGCAAGCCCG

consensusID : consensus_12578#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 497
fasta sequence 
                              [GGGCAGGGACAGAGTTCCAGGAGGTNCCTGTTCCGATATCCTGCCTGCGGGCATGGCGGCTGGGCCTCAAGAGGGACCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACTTTGTTGACAGCCCCAGGTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTGAAGACATGTCTCTGCGTCAGTGCCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCACCAGACTTCTGAACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCAGAAACTCCCTGCCGGNCAGCTTTTAGCAAACCGGGCCTCGCAANGATATCCTTCTTAGACCAGGCTCAAGAAGCTCCTGAGGCAAAAATCGCTGAAANGGNTTCAGGGGGNAGCCTTTGNATTGTNGGGAAAAAACCGNGGAACACANTNNGACGGGGANNTTGTNGTCNAANAGGGTTCNTGGGACAANAAATTN]

[+] EMBL AI096172             [GGGCAGGGACAGAGTTCCAGGAGGTNCCTGTTCCGATATCCTGCCTGCGGGCATGGCGGCTGGGCCTCAAGAGGGACCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACTTTGTTGACAGCCCCAGGTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTGAAGACATGTCTCTGCGTCAGTGCCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCACCAGACTTCTGAACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCAGAAACTCCCTGCCGGNCAGCTTTTAGCAAACCGGGCCTCGCAANGATATCCTTCTTAGACCAGGCTCAAGAAGCTCCTGAGGCAAAAATCGCTGAAANGGNTTCAGGGGGNAGCCTTTGNATTGTNGGGAAAAAACCGNGGAACACANTNNGACGGGGANNTTGTNGTCNAANAGGGTTCNTGGGACAANAAATTN]




>consensus_12578#4
GGGCAGGGACAGAGTTCCAGGAGGTNCCTGTTCCGATATCCTGCCTGCGGGCATGGCGGC
TGGGCCTCAAGAGGGACCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACT
TTGTTGACAGCCCCAGGTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTG
AAGACATGTCTCTGCGTCAGTGCCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAAC
GGAATGCCACCAGACTTCTGAACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGC
AGAAACTCCCTGCCGGNCAGCTTTTAGCAAACCGGGCCTCGCAANGATATCCTTCTTAGA
CCAGGCTCAAGAAGCTCCTGAGGCAAAAATCGCTGAAANGGNTTCAGGGGGNAGCCTTTG
NATTGTNGGGAAAAAACCGNGGAACACANTNNGACGGGGANNTTGTNGTCNAANAGGGTT
CNTGGGACAANAAATTN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12578#0      TCGAGAAAAACAGATTGGTTTTACTATCTCGTTAACAACTTAATTAAGCCTTGCGCGTTG 60
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      AGAAAAACAACACTAGACATTTTTTGGGTGCTGCTTCTAGTATCAAAGTTCTCAGTAATC 120
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      AGTTCAAACTTAGAACCTCAATGAAGAATGCTAACAGTTGCACAACTAGTAGGGAAGTTA 180
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TTACCATCTTGCTCCTGTCCTTCTAAGTCAAACACTTAGTAAATCGTTGACATCAATTTC 240
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TAGTAATTTGTGCAATTTAACAACGATTTTGCTATATCTCACTTGAAAGTTTTTTTCTTA 300
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TCTCTCACTTGATTTTCTCACTCAAATTTACAGTGCATTTTCTTGTAAGTTACAGTGTAA 360
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TTTATGAAACTTACACTGTAACTTTTGTAAGTTACACTGTAATTTTTGAATCTTCGCATG 420
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TAAATTTTAAATTTTGTATTGGATTTGGTCTTTTTCTTGAGGATATGGTAATTTAGTGTC 480
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      CATTATGGTGTTTCTTAATTGTTTTTTGCTTTTTATTAAATCTATCGGATTTTAATCCAA 540
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      AGATTAAAAATCTGTGTGATACGATCATAAAAATCTTTTGAAAGATGTATAGGTACTCCC 600
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      ATTTAACAACACGTAAATTGTATGTTATGAAAGCATTTCTCATGGTGCATCTTAAAAACG 660
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TAATCTTATTACGTTAAACTATATTAACATGAATTTTTATAAATTAATGGTCAAAGGTAT 720
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TCACCTTTGATTTAGGACAAAGCTAAAACGGCAAGTAATTTAAAACGAAGCAAGTACCTT 780
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TATGTAAGTCTGTTCTCCTGAGTTTGGTATTAATGAATCGTACATATGTGAATACATATG 840
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      CACCTTGTATAGTTGGCATGTAATGCGGTTCTTGAGCAAATCTTTGTAATTTGTCGAGTA 900
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      GAAACTGTTTTTGACAAGTAGACGTGTCAATTATTGAATCATAGTATTATTGCTTTCCTA 960
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      GAAATAATTGCTCAATTATTGCAAGGAGTACTAGTATTTATCAGACAACCTGAAAGAGAC 1020
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      ATGGTCTTATCGCAAAAGAAAATGAGGATAGAAAAACTGTGGCTGGTGTATTTAGCAGAT 1080
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      CGATCATATGGTAACAGCCTAGATTTTTATTGATATCTAATCTGCCTCAGTACTAAAGCG 1140
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TTTGTCAGCCTGAATTCCAGATTGGCAGAAAAGAGACTTTACCATGCAATGCAGGATGAG 1200
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      GGCTTGCCCACAGGTCCATGTCAAGATGCCCTGAACCAGAGTTAAGCTTGCCATTGGAGA 1260
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      ACCTAAAACGTCACAGTCCAAACTTCCAATATCTTTCTGAAGCAATGACAGAAATTCTTG 1320
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TGTCCCAGGCTCCCAGCCAATTTGTTAAAACTTTCTTATGCCGGCTTTCACATCGTAGTT 1380
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      GCTGAGTCCTACTTCAGACAGGAACACCAATGCAACTATGCAAATAGCATTCTGGCAAAT 1440
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      CATGTTCTTTTCTTTTTGCCATGTCTGATATTTCTTGAATAATCCACTAGCAGCATCTTC 1500
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TGCCGATGGCAACCACTGGTTCTACGGAGATAAAAGTCCAGATTTGTCGGCCTATTTGTT 1560
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TGTTCTGTTCATCGATTAGTGGTAGTGAACTAGTGGCCAGGCATTCTTCTGTACTAGTTC 1620
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      ACAAACCTGACATGCATGCAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTG 1680
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      AGCAGGACAGAGTTCCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTC 1740
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      AAGAGGGACCCGATCGTTATACTGCGCATCGACGGCGAGGACCTGAGGGACTTTGTTGAC 1800
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      AGCCCCAGGTATGAGCCAGAAGCTGCTGCCATCTTCTCAAAGATAGGTTCTGAAGACATG 1860
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TCTCTGCGTCAGTGCCTGCTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATGCCA 1920
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      CCAGCTTCTGACCCTTGGGTTGCAGAGAACATCATAGAGCCGGCATTGCAGAAACTCCCT 1980
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      GCCGGCCAGCTTGAGCAACCGGCCTCGCAAGATATCTTCTTAGAACAGCTCAAGAAGCTC 2040
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      CTGAGCAACATCGCTGAAAGGCTTCAGGAGCAGCCTGTGATTGTCGCACACACCGAGAAC 2100
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      ACATTCGACGGTAGTTGTGTCAAGAGGCTGCTGGACAACAAATTCGAGCTGGACAAGTTG 2160
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ------------------------------------------------------------
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ------------------------------------------------------------
                                                                                   

consensus_12578#0      TTGGATTCTGTCTGGAAAGATGTACTCATAGAGCATAAGAACAAAGGATCCAGGGAGTGC 2220
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      ----------------------------------------CATCTACTCCGAGGCAATCA 20
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      --------------------------------------------------GAGATACGGG 10
                                                                                   

consensus_12578#0      CTGATAGCCGCACTCGATAAGATGGCAGATGCAGCAGGCTTACCACCTTACGGTGCCGTT 2280
consensus_12578#3      ----------------------------------CAGGCTCATCACCTTACGGTGCCGTT 26
consensus_12578#2      GCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGG-ACAGAGTTCCAGGAGGTCCTG 79
consensus_12578#4      -------------------------------GGGCAGGGACAGAGTTCCAGGAGGTNCCT 29
consensus_12578#1      AGCTGGTGGAGGACAGGGAGGCGTTCGGGATGTTCGCGGAGAGCAAGTTCCGGGAGCTCG 70
                                                         *  *   *         *        

consensus_12578#0      AATCAGGTGGATGCCGT-GGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGAAAGAAC 2339
consensus_12578#3      AATCAGGTGGATGCCGT-GGTGAATGAGGCGCTCAAGACAGTTAATGCTGATGAAAGAAC 85
consensus_12578#2      --TCCGATATCCTCCTC-G---G----------CATGGCGGCTGG-CCTCAAGAGGGACC 122
consensus_12578#4      GTTCCGATATCCTGCCT-GCGGG----------CATGGCGGCTGGGCCTCAAGAGGGACC 78
consensus_12578#1      ACGCCGACGGCGACGGCAGGCTGTCCGTGCGTGAGCTGCAGCCGGCGGTGGAG-GGCATC 129
                          * *            *                   * *       *   *    * *

consensus_12578#0      AG--CGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTT-AGG---GCAGT 2393
consensus_12578#3      AG--CGGTAGACGAGGCCGGGTTCAAGAAACTACTGACAGATATCCTT-ATG---GCAGT 139
consensus_12578#2      CGATCGTTATACTGCGCATCGACGGCGAGGAC-CTGAGGGACTTTGTTGACA---GCCCC 178
consensus_12578#4      CGATCGTTATACTGCGCATCGACGGCGAGGAC-CTGAGGGACTTTGTTGACA---GCCCC 134
consensus_12578#1      GGCGCCGCGCTCGGGCTGCCGGCGCGCGGGTCTTCGCCCAACGCCGACCACATCTACTCC 189
                        *  *      *        *              *    *        *      *   

consensus_12578#0      GATGATGCAGCTGAACAGACAGC-CGATTTTCGTCTCGAACAGCACCGTAGTTCACGAGC 2452
consensus_12578#3      GATGATGCAGCTGAACAGACAGC-CGATTTTCGTCTCGAACAGCACCGTAGTTCACGAGC 198
consensus_12578#2      AGGTATGAGCCAGAAGCTGCTGC-C-ATCTTCTCAAAGATAGGTTCTGAAG---ACATGT 233
consensus_12578#4      AGGTATGAGCCAGAAGCTGCTGC-C-ATCTTCTCAAAGATAGGTTCTGAAG---ACATGT 189
consensus_12578#1      GAGATTGGCAGAAAAGAGACTTTACCATGCAATGCAGGATGAGGGCTT--GCCCACAGGT 247
                            **      **    *    * **         **   *  *    *   **  * 

consensus_12578#0      CATTGTTCAGTTCATCCG---CAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTG 2509
consensus_12578#3      CATTGTTCAGGTCATCCG---CAATTTTATCCTCGCCTCCAGTGAAATCATCGCCGAGTG 255
consensus_12578#2      CTCTGCGTCAGTGCC-TG---CTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATG 289
consensus_12578#4      CTCTGCGTCAGTGCCCTG---CTAGCTGCTCTTCAGCTGCTGAATGTCGACAACGGAATG 246
consensus_12578#1      CCATGTCAAGATGCCCTGAACCAGAGTTAAGCTTGCCATTGGAGAACCTAAAACGTCACA 307
                       *  **      *     *   *    *     *   *    *       *   *      

consensus_12578#0      --AATAAATTAAACCATATATGAATGTTAATGT---GCTTGACAGTGGTCTATCTGTAAG 2564
consensus_12578#3      --AATAAATTAAACCATATATGAATGTTAATGT---GCTTGACAGTGGTCTATCTGTAAG 310
consensus_12578#2      CCACCAG-CTTCTGA-CCCTTGGGTTGCAGAGA---ACATCATAGAGCCGGCATTGCAGA 344
consensus_12578#4      CCACCAGACTTCTGAACCCTTGGGTTGCAGAGA---ACATCATAGAGCCGGCATTGCAGA 303
consensus_12578#1      GTCCAAACTTCCAATATCTTTCTGAAGCAATGACAGAAATTCTTGTGTCCCAGGCTCCCA 367
                            *   *          *       *  *       *    * *             

consensus_12578#0      CAGTGCCTGTGATGTTGCTTTTTTGTCTGATCAAGCACTGCGGGGGC---ATG---TATA 2618
consensus_12578#3      CAGTGCCTGTGATGTTGCTTTTTTGTCTGATCAAGCACTGCGGGGGC---ATG---TATA 364
consensus_12578#2      AACTCCCTGCCGGCCAG---TTTGAGCAA-CCGGCCCTCC--AAGAT---ATC-TTCTTA 394
consensus_12578#4      AACTCCCTGCCGGNCAGC--TTTTAGCAAACCGGGCCTCGCAANGAT---ATCCTTCTTA 358
consensus_12578#1      GCCAATTTGTTAAAACTTTCTTATGCCGGCTTTCACATCGTAGTTGCTGAGTCCTACTTC 427
                              **           **    *        *               *      * 

consensus_12578#0      GACTGGCTACAACCTGA-CGAGATGTAAAGAACACTTCCGTCAGTCTTGC---TAGCCT- 2673
consensus_12578#3      GACTGGCTACAACCTGA-CGAGATGTAAAGAACACTTCCGTCAGTCTTGC---TAGCCT- 419
consensus_12578#2      GACCAG-CTCAAGAAGCTCCTGAGC--AACATCGCTGAAAGG-CTTCAGGAG-CAGCCTG 449
consensus_12578#4      GACCAGGCTCAAGAAGCTCCTGAGGCAAAAATCGCTGAAANGGNTTCAGGGGGNAGCCTT 418
consensus_12578#1      AGACAGGAACACCAATGCAACTATGCAAATAGCATTCTGGCAAATCATGTTCTTTTCTTT 487
                            *   **           *    ** * *  *        *   *       * * 

consensus_12578#0      -GATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAATGGCAAAT 2732
consensus_12578#3      -GATTGATGTATAAGTTTGGAATAAGGCTTTCAAGCTATACAGATTGATCAATGGCAAAT 478
consensus_12578#2      CGATTGCTCTACACACCGAGTACACATTTCACG-GCTCCTGCGGTCAGACGCTGCTGGAC 508
consensus_12578#4      TGNATTGTNGGGAAA---AAACCGNGGAACACA-NTNNGACGGGGANNTTGTNGTCNAAN 474
consensus_12578#1      TTGCCATGTCTGATATTTCTTGAATAATCCACTAGCAGCATCT-TCTGCCGATGGCAACC 546
                                   *                  *                     *      

consensus_12578#0      GCAACTATTTTGCAGTTTGCATTCATTGGGGGACTGTTTATTCTCCAGGAAC-TGTTCAG 2791
consensus_12578#3      GCAACTATTTTGCAGTTTGCATTCATTGGGGGACTGTTTATTCTCCAGGAAC-TGTTCAG 537
consensus_12578#2      ACAA--ATTTCAGCTCGGACAGCTGTCTGGATCCTGTCTGGAAAGATGCTCT-CCTAGAG 565
consensus_12578#4      AGGG--TTCNTGGGACAANAAATTN----------------------------------- 497
consensus_12578#1      ACTGGTTCTACGGAGATAAAAGTCCAGATTTGTCGGCCTATTTGTTTGTTCTGTTCATCG 606
                                           *                                       

consensus_12578#0      CTCTCTAA-TGATAAGGTTTACTATTTAGT------------------------------ 2820
consensus_12578#3      CTCTCTAAACCAGCAAGCCCG--------------------------------------- 558
consensus_12578#2      CTTAACAACCAGGCATCACCGAGCGCCTCGTAGCCTCCACTCGATAATATGCGACATGCA 625
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      ATTAGTGGTAGTGAACTAGTGGCCAGGCATTCTTCTGTACTAGTTCACAAACCTGACATG 666
                                                                                   

consensus_12578#0      ------------------------------------------------------------
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      CTTATGCTTACCACCTTTACGGGGCCCTTAATCATGGGGCTACCCTGGTGAATTAAGGCC 685
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      CATGCAGGCAATCAGCGAGCTCACTCATGGGAAGAAAGAGGAGGTGAGCAGGACAGAGTT 726
                                                                                   

consensus_12578#0      ------------------------------------------------------------
consensus_12578#3      ------------------------------------------------------------
consensus_12578#2      TCACAACAGTAATGCCGATT---------------------------------------- 705
consensus_12578#4      ------------------------------------------------------------
consensus_12578#1      CCAGGAGGTCCTGTCCGATATCCTCCTCGGCATGGCGGCTGGCCTCAAGAGGGACCCGAT 786
                                                                                   

consensus_12578#0      ------------
consensus_12578#3      ------------
consensus_12578#2      ------------
consensus_12578#4      ------------
consensus_12578#1      CGTTATACTGCG 798


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)