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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12581#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3574 fasta sequence
[TGCGCCGCACAACCACAACCCATACGCAACTCCACCCAAAAACCAGCGTCGCATCGCACGCGCAAGCGCAGCACGAGCACAGTGAGGAGGAGCTTAGCTTAGCCTAGCTAGCTTAGCTCTACCAAAAGCTCTCTGTAGCTTGCTTGCTGCCCAGTATTGGGAGGGGCCGAAGGGCAATGGTGGGAGGCAGCCGTCTGTTCCTCCTCCTCCTCCTACCTTTGCTGCTGCTGCTGCTGGGCGCCGGCTGCAGAGATGGCCGCCGGTGCGCCGCCGCGGCCGCGCAGACTCAGAGGCTGCCGCAGCAAGAAGTTGAAGCACTTAA-GGGAATAGCACGCAAGCTTAACAAGATGGATTGGGACTTCAG-TGTGGATCCATGCACTGGGTCTAAAACTTGGGTTAATGCCAGTGATTCCAATAGTTACCCAAAATCTAGTTATCCTAATTTTCCAGTCAGCAATCTGACATGTGATTGTTCATTCAAGAACAACACAGAGTGTCATGTTATCAGCTTGGAACTTATGCGTCAGAATCTTAGTGGAGTTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCTTGACTTATCACGCAATTTCATCCAAGGACCAATTCCAGCATCATGGGCTAGCCTACCTGTTTTTAATCTGTCTCTCCAGGGAAATCGCATATCTGGAACAGTACCTAAGGAGCTTGGACGCATGCCCTTCTTGAAATCTATAAATCTAGAAGGCAATCAGCTTGAGGGTCATATTCCACCAGAATTCGGTAACATCATCAGTTTGGAGAGATTTTTCATTTCTGCAAATGACATCACAGGAGAGTTGCCTTCAACCTTTTCCAGGCTCACAAATATGACAGATTTCCGAATTGACGGGACCAATATCTCAGGAAGAATACCCAGTTTCATAAAAAATTGGCAACGGGTCAACAGAATAGACATGCAGGGTACCTTGATGAGTGGGCCTATTCCTCCAGAAATTTCTTTGTTGAACAACTTAACAGAACTGAGAGTGACTGATTTGAGTGGACCGAGCATGAAATTTCCTCCCTTACAAAATGCACAGCACCTTACAAAAGTGGTCCTAAGAAACTGCTCCATATATGGTGAAATACCACCTTACCTTGGACAGATGCAGTATCTAATACTCATGGATCTAAGCTTCAACAAGTTGACTGGTCAAATTCCACAAAATTTTGACAGAATGGTGGCACTACAACTACAATATTTGTACTTAAGTGACAACATGCTGACTGGAGATTTGCCTGGTTGGATGTTGAAAAACAAGGCAAGCAACAAAGTAAACATGGATGTGTCGTTTAATAACTTCACGGGTAACCCTCCAAATGAATGTCAACAAGCAAACGTAAATATGGTTTCAAGTTTTTCATCCTCAAATGACAATCTTTTGCAACCATGTTTACGAAAGAATCTTCCCTGCATGGACAAACCACGCTATTCCTCCCTATTTATTAACTGTGGTGGCAAAAGTGTTGAGGTCAATGGGAATATTTATGAGGATGACTCATCTCGAATAGGAACATCAACTTTTGTTTTATCAAATGACAGAAAATGGGCCTATAGTAGTACAGGAGATTTTGTGGGTAATCCAGATGCTGATTACATTGCTAGAAACACATCAGAACTCACACTGGATCACCCTGAGTTATACACTGAAGCTCGCCTCTCACCCCTCTCACTGAAATACTATGGAGTCTGCATGGAAAATGGTGAATATTCTGTAGAACTTCATTTTGCTGAGATTGTGTTTACAGAAGATCATACTTTTTCCAGCAATGGCAAGCGCATTTTTGATGTTTTTATCCAGGGTACTAAAGTTTTGAAGGATTTTAACATTCAAGATGAGGCTGGTGGTGTCCATCGTGTAATTACAAAAACTTTCACAACCAACATCACAGATAATACATTGGAAATTCACTTCTACTGGGCAGGCAAAGGTACCACAGGTGTTCCTGACCGGGGTGTGTATGGTCCATTGATCTCAGCTATATCTGTGATACAATTAAACAGGAACCATCATGGAATCTCTACTGGATTGATGATTACTATAATAGTAGCAGCATGTTTGATTGTCATACTTGCGCTAATTCTTTGCTATATCAAATTCTTCCGGAAAAAGAATCTGAAAGGAAATGGTTTACAATTCTTTTACCATGGAAGGAAGACCGATACTTCAGATCTTCAGACACGGACACAGTACTTCTTTAGCTTAAAAGAAATTGAATCTGCAACGAAAAATTTTGATCCTGCAAATAAAATTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGACGTGGAGATCATCAATTGAAACTAGACTGGCCAAAACGATATAATATCTGCCTTGGAACAGCAAAAGGCTTGTGCTATCTCCATGAAGAATCAACATTGAAAATCATCCATAGAGATATTAAACCATCAAATATTCTTCTTGATGAAAGACTGCAACCGAAAATATCTGATTTTGGTTTGGCTAAACTGAATGATGACCGTGGGCGTATGAGCACTCGGATAGCTGGAACAGTTGGATACATGGCACCTGAGTATGCCACGAGAGGTTGCTTGACATGTAAAGCAGATGTATACAGTTTTG-GAGTGGTGACATTAGAGATTGTTAGTGGAATGAGCAATACAAGTAGCATGTCAGATGACGAATATCTCCATCTTCTTGACTGGGCTGAAAGATTGAAGCAGGAAGGGAGACTACTGGAAATCGTTGACCAGCGTCTTGGTTCTCACTACTCTCAAGAAGAAGCACTTAGGATGCTCAATGTAGCTCTTCTATGCACAAACACATCACCTGTTCAGAGGCCAAGAATGTCTTCGGTGGTGAGCATGCTCTGTGGCCAAGCCCCTCTAGAGGTTGTACCTGATGAAGATTTGAGTGGATACATCAGGCCCAGTTACTCCCAATCCAATCAATCCATGAACAACAGCCTAACGGAGTGGTCCTACGCGCCATCGAGCGATCCTTCGATCTTGCTGCAGAACAGTATGGAGAGTGGTTACCTCCCATCTTCAAGCTCCCCTTCTTCAAAGCTGTGAGCTGCAGCACCAGGATTAGCTAGGATGAAATGTTGGCAATTGTTTTGAGCCCAATGCAGCAACTGTACATATGCATATGCATTTGCTCTGTCTGTAATCCCCTGTAGTTTGGCATTCTGTCAGTTGTCCTCAGCCTTCTCATCCATGGCATATGACAATTGATATCAATGATGCATTGCCATGATGATATATTCTTCACAAGGGGACTGGAAGCAGATATTGGAATCTGATGCTGCTGATGTGATGGTACATATGAATTGAGCAACTTCTCAGGGGCACCACTTGAGTTTCTTGTTTGTTAGCCTTGGTCATCATGTATCTAGTAAATGCAATGTACAACTAATCTGTGCAAATGTGGATATCTAGTAAGTTTTTTTTTTTCTTTTCTTTTCTAGCTAGGAAGGTTATTGTTTGGTGGGCAAGTAGAGAAGACATGTAACATAATAACAGTTCAGTGCAAACTAGTTTCTGCCCTTGTTAACTTAAAAAAGAAGGAAAAAGTAC]
[+] EMBL AK065815 [TGCGCCGCACAACCACAACCCATACGCAACTCCACCCAAAAACCAGCGTCGCATCGCACGCGCAAGCGCAGCACGAGCACAGTGAGGAGGAGCTTAGCTTAGCCTAGCTAGCTTAGCTCTACCAAAAGCTCTCTGTAGCTTGCTTGCTGCCCAGTATTGGGAGGGGCCGAAGGGCAATGGTGGGAGGCAGCCGTCTGTTCCTCCTCCTCCTCCTACCTTTGCTGCTGCTGCTGCTGGGCGCCGGCTGCAGAGATGGCCGCCGGTGCGCCGCCGCGGCCGCGCAGACTCAGAGGCTGCCGCAGCAAGAAGTTGAAGCACTTAA GGGAATAGCACGCAAGCTTAACAAGATGGATTGGGACTTCAG TGTGGATCCATGCACTGGGTCTAAAACTTGGGTTAATGCCAGTGATTCCAATAGTTACCCAAAATCTAGTTATCCTAATTTTCCAGTCAGCAATCTGACATGTGATTGTTCATTCAAGAACAACACAGAGTGTCATGTTATCAGCTTGGAACTTATGCGTCAGAATCTTAGTGGAGTTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCTTGACTTATCACGCAATTTCATCCAAGGACCAATTCCAGCATCATGGGCTAGCCTACCTGTTTTTAATCTGTCTCTCCAGGGAAATCGCATATCTGGAACAGTACCTAAGGAGCTTGGACGCATGCCCTTCTTGAAATCTATAAATCTAGAAGGCAATCAGCTTGAGGGTCATATTCCACCAGAATTCGGTAACATCATCAGTTTGGAGAGATTTTTCATTTCTGCAAATGACATCACAGGAGAGTTGCCTTCAACCTTTTCCAGGCTCACAAATATGACAGATTTCCGAATTGACGGGACCAATATCTCAGGAAGAATACCCAGTTTCATAAAAAATTGGCAACGGGTCAACAGAATAGACATGCAGGGTACCTTGATGAGTGGGCCTATTCCTCCAGAAATTTCTTTGTTGAACAACTTAACAGAACTGAGAGTGACTGATTTGAGTGGACCGAGCATGAAATTTCCTCCCTTACAAAATGCACAGCACCTTACAAAAGTGGTCCTAAGAAACTGCTCCATATATGGTGAAATACCACCTTACCTTGGACAGATGCAGTATCTAATACTCATGGATCTAAGCTTCAACAAGTTGACTGGTCAAATTCCACAAAATTTTGACAGAATGGTGGCACTACAACTACAATATTTGTACTTAAGTGACAACATGCTGACTGGAGATTTGCCTGGTTGGATGTTGAAAAACAAGGCAAGCAACAAAGTAAACATGGATGTGTCGTTTAATAACTTCACGGGTAACCCTCCAAATGAATGTCAACAAGCAAACGTAAATATGGTTTCAAGTTTTTCATCCTCAAATGACAATCTTTTGCAACCATGTTTACGAAAGAATCTTCCCTGCATGGACAAACCACGCTATTCCTCCCTATTTATTAACTGTGGTGGCAAAAGTGTTGAGGTCAATGGGAATATTTATGAGGATGACTCATCTCGAATAGGAACATCAACTTTTGTTTTATCAAATGACAGAAAATGGGCCTATAGTAGTACAGGAGATTTTGTGGGTAATCCAGATGCTGATTACATTGCTAGAAACACATCAGAACTCACACTGGATCACCCTGAGTTATACACTGAAGCTCGCCTCTCACCCCTCTCACTGAAATACTATGGAGTCTGCATGGAAAATGGTGAATATTCTGTAGAACTTCATTTTGCTGAGATTGTGTTTACAGAAGATCATACTTTTTCCAGCAATGGCAAGCGCATTTTTGATGTTTTTATCCAGGGTACTAAAGTTTTGAAGGATTTTAACATTCAAGATGAGGCTGGTGGTGTCCATCGTGTAATTACAAAAACTTTCACAACCAACATCACAGATAATACATTGGAAATTCACTTCTACTGGGCAGGCAAAGGTACCACAGGTGTTCCTGACCGGGGTGTGTATGGTCCATTGATCTCAGCTATATCTGTGATACAATTAAACAGGAACCATCATGGAATCTCTACTGGATTGATGATTACTATAATAGTAGCAGCATGTTTGATTGTCATACTTGCGCTAATTCTTTGCTATATCAAATTCTTCCGGAAAAAGAATCTGAAAGGAAATGGTTTACAATTCTTTTACCATGGAAGGAAGACCGATACTTCAGATCTTCAGACACGGACACAGTACTTCTTTAGCTTAAAAGAAATTGAATCTGCAACGAAAAATTTTGATCCTGCAAATAAAATTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGACGTGGAGATCATCAATTGAAACTAGACTGGCCAAAACGATATAATATCTGCCTTGGAACAGCAAAAGGCTTGTGCTATCTCCATGAAGAATCAACATTGAAAATCATCCATAGAGATATTAAACCATCAAATATTCTTCTTGATGAAAGACTGCAACCGAAAATATCTGATTTTGGTTTGGCTAAACTGAATGATGACCGTGGGCGTATGAGCACTCGGATAGCTGGAACAGTTGGATACATGGCACCTGAGTATGCCACGAGAGGTTGCTTGACATGTAAAGCAGATGTATACAGTTTTG GAGTGGTGACATTAGAGATTGTTAGTGGAATGAGCAATACAAGTAGCATGTCAGATGACGAATATCTCCATCTTCTTGACTGGGCTGAAAGATTGAAGCAGGAAGGGAGACTACTGGAAATCGTTGACCAGCGTCTTGGTTCTCACTACTCTCAAGAAGAAGCACTTAGGATGCTCAATGTAGCTCTTCTATGCACAAACACATCACCTGTTCAGAGGCCAAGAATGTCTTCGGTGGTGAGCATGCTCTGTGGCCAAGCCCCTCTAGAGGTTGTACCTGATGAAGATTTGAGTGGATACATCAGGCCCAGTTACTCCCAATCCAATCAATCCATGAACAACAGCCTAACGGAGTGGTCCTACGCGCCATCGAGCGATCCTTCGATCTTGCTGCAGAACAGTATGGAGAGTGGTTACCTCCCATCTTCAAGCTCCCCTTCTTCAAAGCTGTGAGCTGCAGCACCAGGATTAGCTAGGATGAAATGTTGGCAATTGTTTTGAGCCCAATGCAGCAACTGTACATATGCATATGCATTTGCTCTGTCTGTAATCCCCTGTAGTTTGGCATTCTGTCAGTTGTCCTCAGCCTTCTCATCCATGGCATATGACAATTGATATCAATGATGCATTGCCATGATGATATATTCTTCACAAGGGGACTGGAAGCAGATATTGGAATCTGATGCTGCTGATGTGATGGTACATATGAATTGAGCAACTTCTCAGGGGCACCACTTGAGTTTCTTGTTTGTTAGCCTTGGTCATCATGTATCTAGTAAATGCAATGTACAACTAATCTGTGCAAATGTGGATATCTAGTAAGTTTTTTTTTTTCTTTTCTTTTCTAGCTAGGAAGGTTATTGTTTGGTGGGCAAGTAGAGAAGACATGTAACATAATAACAGTTCAGTGCAAACTAGTTTCTGCCCTTGTTAACTTAAAAAAGAAGGAAAAAGTAC]
[+] EMBL AK103384 [ ATCGCACGCGCAAGCGCAGCACGAGCACAGTGAGGAGGAGCTTAGCTTAGCCTAGCTAGCTTAGCTCTACCAAAAGCTCTCTGTAGCTTGCTTGCTGCCCAGTATTGGGAGGGGCCGAAGGGCAATGGTGGGAGGCAGCCGTCTGTTCCTCCTCCTCCTCCTACCTTTGCTGCTGCTGCTGCTGGGCGCCGGCTGCAGAGATGGCCGCCGGTGCGCCGCCGCGGCCGCGCAGACTCAGAGGCTGCCGCAGCAAGAAGTTGAAGCACTTAA GGGAATAGCACGCAAGCTTAACAAGATGGATTGGGACTTCAG TGTGGATCCATGCACTGGGTCTAAAACTTGGGTTAATGCCAGTGATTCCAATAGTTACCCAAAATCTAGTTATCCTAATTTTCCAGTCAGCAATCTGACATGTGATTGTTCATTCAAGAACAACACAGAGTGTCATGTTATCAGCTTGGAACTTATGCGTCAGAATCTTAGTGGAGTTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCTTGACTTATCACGCAATTTCATCCAAGGACCAATTCCAGCATCATGGGCTAGCCTACCTGTTTTTAATCTGTCTCTCCAGGGAAATCGCATATCTGGAACAGTACCTAAGGAGCTTGGACGCATGCCCTTCTTGAAATCTATAAATCTAGAAGGCAATCAGCTTGAGGGTCATATTCCACCAGAATTCGGTAACATCATCAGTTTGGAGAGATTTTTCATTTCTGCAAATGACATCACAGGAGAGTTGCCTTCAACCTTTTCCAGGCTCACAAATATGACAGATTTCCGAATTGACGGGACCAATATCTCAGGAAGAATACCCAGTTTCATAAAAAATTGGCAACGGGTCAACAGAATAGACATGCAGGGTACCTTGATGAGTGGGCCTATTCCTCCAGAAATTTCTTTGTTGAACAACTTAACAGAACTGAGAGTGACTGATTTGAGTGGACCGAGCATGAAATTTCCTCCCTTACAAAATGCACAGCACCTTACAAAAGTGGTCCTAAGAAACTGCTCCATATATGGTGAAATACCACCTTACCTTGGACAGATGCAGTATCTAATACTCATGGATCTAAGCTTCAACAAGTTGACTGGTCAAATTCCACAAAATTTTGACAGAATGGTGGCACTACAACTACAATATTTGTACTTAAGTGACAACATGCTGACTGGAGATTTGCCTGGTTGGATGTTGAAAAACAAGGCAAGCAACAAAGTAAACATGGATGTGTCGTTTAATAACTTCACGGGTAACCCTCCAAATGAATGTCAACAAGCAAACGTAAATATGGTTTCAAGTTTTTCATCCTCAAATGACAATCTTTTGCAACCATGTTTACGAAAGAATCTTCCCTGCATGGACAAACCACGCTATTCCTCCCTATTTATTAACTGTGGTGGCAAAAGTGTTGAGGTCAATGGGAATATTTATGAGGATGACTCATCTCGAATAGGAACATCAACTTTTGTTTTATCAAATGACAGAAAATGGGCCTATAGTAGTACAGGAGATTTTGTGGGTAATCCAGATGCTGATTACATTGCTAGAAACACATCAGAACTCACACTGGATCACCCTGAGTTATACACTGAAGCTCGCCTCTCACCCCTCTCACTGAAATACTATGGAGTCTGCATGGAAAATGGTGAATATTCTGTAGAACTTCATTTTGCTGAGATTGTGTTTACAGAAGATCATACTTTTTCCAGCAATGGCAAGCGCATTTTTGATGTTTTTATCCAGGGTACTAAAGTTTTGAAGGATTTTAACATTCAAGATGAGGCTGGTGGTGTCCATCGTGTAATTACAAAAACTTTCACAACCAACATCACAGATAATACATTGGAAATTCACTTCTACTGGGCAGGCAAAGGTACCACAGGTGTTCCTGACCGGGGTGTGTATGGTCCATTGATCTCAGCTATATCTGTGATACAATTAAACAGGAACCATCATGGAATCTCTACTGGATTGATGATTACTATAATAGTAGCAGCATGTTTGATTGTCATACTTGCGCTAATTCTTTGCTATATCAAATTCTTCCGGAAAAAGAATCTGAAAGGAAATGGTTTACAATTCTTTTACCATGGAAGGAAGACCGATACTTCAGATCTTCAGACACGGACACAGTACTTCTTTAGCTTAAAAGAAATTGAATCTGCAACGAAAAATTTTGATCCTGCAAATAAAATTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGACGTGGAGATCATCAATTGAAACTAGACTGGCCAAAACGATATAATATCTGCCTTGGAACAGCAAAAGGCTTGTGCTATCTCCATGAAGAATCAACATTGAAAATCATCCATAGAGATATTAAACCATCAAATATTCTTCTTGATGAAAGACTGCAACCGAAAATATCTGATTTTGGTTTGGCTAAACTGAATGATGACCGTGGGCGTATGAGCACTCGGATAGCTGGAACAGTTGGATACATGGCACCTGAGTATGCCACGAGAGGTTGCTTGACATGTAAAGCAGATGTATACAGTTTTG GAGTGGTGACATTAGAGATTGTTAGTGGAATGAGCAATACAAGTAGCATGTCAGATGACGAATATCTC ]
[+] EMBL CB639788 [ GCCTAGCTAGCTTAGCTCTACCAAAAGCTCTCTGTAGCTTGCTTGCTGCCCAGTATTGGGAGGGGCCGAAGGGCAATGGTGGGAGGCAGCCGTCTGTTCCTCCTCCTCCTCCTACCTTTGCTGCTGCTGCTGCTGGGCGCCGGCTGCAGAGATGGCCGCCGGTGCGCCGCCGCGGCCGCGCAGACTCAGAGGCTGCCGCAGCAAGAAGTTGAAGCACTTAA GGGAATAGCACGCAAGCTTAACAAGATGGATTGGGACTTCAG TGTGGATCCATGCACTGGGTCTAAAACTTGGGTTAATGCCAGTGATTCCAATAGTTACCCAAAATCTAGTTATCCTAATTTTCCAGTCAGCAATCTGACATGTGATTGTTCATTCAAGAACAACACAGAGTGTCATGTTATCAGCTTGGAACTTATGCGTCAGAATCTTAGTGGAGTTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCTTGACTTATCACGCAATTTCATCCAAGGACCAATTCCAGCATCATGGGCTAGCCTACCTGTTTTTAATCTGTCTCTCCAGGGAAATCGCATATCTGGAACAGTACCTAAGGAGCTTGGACGCATGC ]
[+] EMBL CB964934 [ gggaataGCTGCGG CGCGCAGACTCAGAGGCTGCCGCAGCAAGAAG TGAAGCACTTAA GGGAATAGCACGCAAGCTTAACAAGATGGATTGGGACTTCAG TGTGGATCCATGCACTGGGTCTAAAACTTGGGTTAATGCCAGTGATTCCAATAGTTACCCAAAATCTAGTTATCCTAATTTTCCAGTCAGCAATCTGACATGTGATTGTTTATTCAAGAACAACACAGAGTGTCATGTTATCAGCTTGGAACTTATGCGTCAGAATCTTAGTGGAGTTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCTTGACTTATCACGCAATTT ]
[+] EMBL CB966722 [ GACTCAGAGGCTGCCGCAGCAAGAAGTTGAAGCACTTAA GGGAATAGCACGCAAGCTTAACAAGATGGA TGGGACTTCAG TGTGGATCCATGCACTGGGTCTAAAACTTGGGTTAATGCCAGTGATTCCAATAGTTACCCAAAATCTAGTTATCCTAATTTTCCAGTCAGCAATCTGACATGTGATTGTTTATTCAAGAACAACACAGAGTGTCATGTTATCAGCTTGGAACTTATGCGTCAGAATCTTAGTGGAGTTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCTTGACTTATCACGCAATTT ]
[+] EMBL CB966635 [ CAGAGGCTGCCGCAGCAAGAAGTTGAAGCACTTAA GGGAATAGCACGCAAGCTTAACAAGATGGA TGGGACTTCAG TGTGGATCCATGCACTGGGTCTAAAACTTGGGTTAATGCCAGTGATTCCAATAGTTACCCAAAATCTAGTTATCCTAATTTTCCAGTCAGCAATCTGACATGTGATTGTTTATTCAAGAACAACACAGAGTGTCATGTTATCAGCTTGGAACTTATGCGTCAGAATCTTAGTGGAGTTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCTTGACTTATCACGCAATTT ]
[+] EMBL CB966364 [ CAGAGGCTGCCGCCGCCAGAAGTTGAAGCACTTAACGGGCATAGCACGCAAGCTTAACAAGATGGATTGGGACTTCAGCTGTGGATCC ]
[+] EMBL CF305646 [ ATCAGAACTCACACTGGATCACCCTGAGTTATACACTGAAGCTCGCCTCTCACCCCTCTCACTGAAATACTATGGAGTCTGCATGGAAAATGGTGAATATTCTGTAGAACTTCATTTTGCTGAGATTGTGTTTACAGAAGATCATACTTTTTCCAGCAATGGCAAGCGCATTTTTGATGTTTTTATCCAGGGTACTAAAGTTTTGAAGGATTTTAACATTCAAGATGAGGCTGGTGGTGTCCATCGTGTAATTACAAAAACTTTCACAACCAACATCACAGATAATACATTGGAAATTCACTTCTACTGGGCAGGCAAAGGTACCACAGGTGTTCCTGACCGGGGTGTGTATGGTCCATTGATCTCAGCTATATCTGTGATACAATTAAACAGGAACCATCATGGAATCTCTACTGGATTGATGATTACTATAATAGTAGCAGCATGTTTGATTGTCATACTTGCGCTAATTCTTTGCTATATCAAATTCTTCCGGA ]
[+] EMBL CF323604 [ GCCAAAACGATATAATATCTGCCTTGGAACAGCAAAAGGCTTGTGCTATCTCCATGAAGAATCAACATTGAAAATCATCCATAGAGATATTAAACCATCAAATATTCTTCTTGATGAAAGACTGCAACCGAAAATATCTGATTTTGGTTTGGCTAAACTGAATGATGACCGTGGGCGTATGAGCACTCGGATAGCTGGAACAGTTGGATACATGGCACCTGAGTATGCCACGAGAGGTTGCTTGACATGTAAAGCAGATGTATACAGTTTTGNGAGTGGTGACATTAGAGATTGTTAGTGGAATGAGCAATACAAGTAGCATGTCAGATGACGAATATCTCCATCTTCTTGACTGGGCTGAAAGATTGAAGCAGGAAGGGAGACTACTGGAAATCGTTGACCAGCGTCTTGGTTCTCACTACTCTCAAGAAGAAGCACTTAGGATGCTCAATGTAGCTCTTCTATGCACAAACACATCACCTGTTCAGAGGCCAAGAATGTCTTCGGTGGTGAGCATGCTCTGTGGC ]
consensusID : consensus_12581#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 320 fasta sequence
[ACCTCACTAAGGGTAGCTTGGGCGCAGACTCAGAGGCTGCGAGCAGAAGTGACACTTAAGGGAATCACGCAAGCTACAAGATGGATGGGACTTCAGGGGATCCATGCACGGGTCTAAAACTGGGTTAATGCCAGGATTCCAATAGTTACCCAAAATCTAGTTATCCTAATTTCCAGTCAGCAATCTGACATGTGATGTTTATTCAAGAACAACACAGAGGTCATGTATCAGCTGGAACTTATGCGTCAGAATCTTAGGAGTTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCTGACTTATCACGCAATTT]
[+] EMBL CB966511 [ACCTCACTAAGGGTAGCTTGGGCGCAGACTCAGAGGCTGCGAGCAGAAGTGACACTTAAGGGAATCACGCAAGCTACAAGATGGATGGGACTTCAGGGGATCCATGCACGGGTCTAAAACTGGGTTAATGCCAGGATTCCAATAGTTACCCAAAATCTAGTTATCCTAATTTCCAGTCAGCAATCTGACATGTGATGTTTATTCAAGAACAACACAGAGGTCATGTATCAGCTGGAACTTATGCGTCAGAATCTTAGGAGTTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCTGACTTATCACGCAATTT]
consensusID : consensus_12581#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 72 fasta sequence
[CAGAGGACGAGACAAGGGGACTGGAAGCAGATATTGGAATCTGATGCTGCTGATGTGATGGTACAAAAAAAA]
[+] EMBL CA765011 [CAGAGGACGAGACAAGGGGACTGGAAGCAGATATTGGAATCTGATGCTGCTGATGTGATGGTACAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12581#0 TGCGCCGCACAACCACAACCCATACGCAACTCCACCCAAAAACCAGCGTCGCATCGCACG 60
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CGCAAGCGCAGCACGAGCACAGTGAGGAGGAGCTTAGCTTAGCCTAGCTAGCTTAGCTCT 120
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 ACCAAAAGCTCTCTGTAGCTTGCTTGCTGCCCAGTATTGGGAGGGGCCGAAGGGCAATGG 180
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TGGGAGGCAGCCGTCTGTTCCTCCTCCTCCTCCTACCTTTGCTGCTGCTGCTGCTGGGCG 240
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CCGGCTGCAGAGATGGCCGCCGGTGCGCCGCCGCGGCCGCGCAGACTCAGAGGCTGCCGC 300
consensus_12581#1 ---------------ACCTCACTAAGGGTAGCTTGG--GCGCAGACTCAGAGGCTGC--G 41
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AGCAAGAAGTTGAAGCACTTAAGGGAATAGCACGCAAGCTTAACAAGATGGATTGGGACT 360
consensus_12581#1 AGCA-GAAGT---GACACTTAAGGGAAT--CACGCAAGCT--ACAAGATGGAT-GGGACT 92
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TCAGTGTGGATCCATGCACTGGGTCTAAAACTTGGGTTAATGCCAGTGATTCCAATAGTT 420
consensus_12581#1 TCAGG--GGATCCATGCAC-GGGTCTAAAACT-GGGTTAATGCCAG-GATTCCAATAGTT 147
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 ACCCAAAATCTAGTTATCCTAATTTTCCAGTCAGCAATCTGACATGTGATTGTTCATTCA 480
consensus_12581#1 ACCCAAAATCTAGTTATCCTAATTT-CCAGTCAGCAATCTGACATGTGAT-GTTTATTCA 205
consensus_12581#2 ---------------------------------------------------------CAG 3
consensus_12581#0 AGAACAACACAGAGTGTCATGTTATCAGCTTGGAACTTATGCGTCAGAATCTTAGTGGAG 540
consensus_12581#1 AGAACAACACAGAG-GTCATGT-ATCAGCT-GGAACTTATGCGTCAGAATCTTA--GGAG 260
consensus_12581#2 AGGACGAGACAAGGGGAC-TGGAAGCAGAT----ATTGGAATCTGATGCTGCTGATGTGA 58
** ** * *** * * * ** * *** * * * * * * * *
consensus_12581#0 TTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCTTGACTTATCACGCAATT 600
consensus_12581#1 TTCTACCTGAAGAAGTTGTCAACCTCACTTATTTGACAAATCT-GACTTATCACGCAATT 319
consensus_12581#2 TGGTACAAAAAAAA---------------------------------------------- 72
* *** ** **
consensus_12581#0 TCATCCAAGGACCAATTCCAGCATCATGGGCTAGCCTACCTGTTTTTAATCTGTCTCTCC 660
consensus_12581#1 T----------------------------------------------------------- 320
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AGGGAAATCGCATATCTGGAACAGTACCTAAGGAGCTTGGACGCATGCCCTTCTTGAAAT 720
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CTATAAATCTAGAAGGCAATCAGCTTGAGGGTCATATTCCACCAGAATTCGGTAACATCA 780
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TCAGTTTGGAGAGATTTTTCATTTCTGCAAATGACATCACAGGAGAGTTGCCTTCAACCT 840
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TTTCCAGGCTCACAAATATGACAGATTTCCGAATTGACGGGACCAATATCTCAGGAAGAA 900
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TACCCAGTTTCATAAAAAATTGGCAACGGGTCAACAGAATAGACATGCAGGGTACCTTGA 960
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TGAGTGGGCCTATTCCTCCAGAAATTTCTTTGTTGAACAACTTAACAGAACTGAGAGTGA 1020
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CTGATTTGAGTGGACCGAGCATGAAATTTCCTCCCTTACAAAATGCACAGCACCTTACAA 1080
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AAGTGGTCCTAAGAAACTGCTCCATATATGGTGAAATACCACCTTACCTTGGACAGATGC 1140
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AGTATCTAATACTCATGGATCTAAGCTTCAACAAGTTGACTGGTCAAATTCCACAAAATT 1200
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TTGACAGAATGGTGGCACTACAACTACAATATTTGTACTTAAGTGACAACATGCTGACTG 1260
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 GAGATTTGCCTGGTTGGATGTTGAAAAACAAGGCAAGCAACAAAGTAAACATGGATGTGT 1320
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CGTTTAATAACTTCACGGGTAACCCTCCAAATGAATGTCAACAAGCAAACGTAAATATGG 1380
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TTTCAAGTTTTTCATCCTCAAATGACAATCTTTTGCAACCATGTTTACGAAAGAATCTTC 1440
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CCTGCATGGACAAACCACGCTATTCCTCCCTATTTATTAACTGTGGTGGCAAAAGTGTTG 1500
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AGGTCAATGGGAATATTTATGAGGATGACTCATCTCGAATAGGAACATCAACTTTTGTTT 1560
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TATCAAATGACAGAAAATGGGCCTATAGTAGTACAGGAGATTTTGTGGGTAATCCAGATG 1620
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CTGATTACATTGCTAGAAACACATCAGAACTCACACTGGATCACCCTGAGTTATACACTG 1680
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AAGCTCGCCTCTCACCCCTCTCACTGAAATACTATGGAGTCTGCATGGAAAATGGTGAAT 1740
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 ATTCTGTAGAACTTCATTTTGCTGAGATTGTGTTTACAGAAGATCATACTTTTTCCAGCA 1800
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 ATGGCAAGCGCATTTTTGATGTTTTTATCCAGGGTACTAAAGTTTTGAAGGATTTTAACA 1860
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TTCAAGATGAGGCTGGTGGTGTCCATCGTGTAATTACAAAAACTTTCACAACCAACATCA 1920
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CAGATAATACATTGGAAATTCACTTCTACTGGGCAGGCAAAGGTACCACAGGTGTTCCTG 1980
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 ACCGGGGTGTGTATGGTCCATTGATCTCAGCTATATCTGTGATACAATTAAACAGGAACC 2040
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 ATCATGGAATCTCTACTGGATTGATGATTACTATAATAGTAGCAGCATGTTTGATTGTCA 2100
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TACTTGCGCTAATTCTTTGCTATATCAAATTCTTCCGGAAAAAGAATCTGAAAGGAAATG 2160
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 GTTTACAATTCTTTTACCATGGAAGGAAGACCGATACTTCAGATCTTCAGACACGGACAC 2220
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AGTACTTCTTTAGCTTAAAAGAAATTGAATCTGCAACGAAAAATTTTGATCCTGCAAATA 2280
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AAATTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGACGTGGAGATCATCAATTGAAACT 2340
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AGACTGGCCAAAACGATATAATATCTGCCTTGGAACAGCAAAAGGCTTGTGCTATCTCCA 2400
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TGAAGAATCAACATTGAAAATCATCCATAGAGATATTAAACCATCAAATATTCTTCTTGA 2460
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TGAAAGACTGCAACCGAAAATATCTGATTTTGGTTTGGCTAAACTGAATGATGACCGTGG 2520
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 GCGTATGAGCACTCGGATAGCTGGAACAGTTGGATACATGGCACCTGAGTATGCCACGAG 2580
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AGGTTGCTTGACATGTAAAGCAGATGTATACAGTTTTGGAGTGGTGACATTAGAGATTGT 2640
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TAGTGGAATGAGCAATACAAGTAGCATGTCAGATGACGAATATCTCCATCTTCTTGACTG 2700
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 GGCTGAAAGATTGAAGCAGGAAGGGAGACTACTGGAAATCGTTGACCAGCGTCTTGGTTC 2760
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TCACTACTCTCAAGAAGAAGCACTTAGGATGCTCAATGTAGCTCTTCTATGCACAAACAC 2820
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 ATCACCTGTTCAGAGGCCAAGAATGTCTTCGGTGGTGAGCATGCTCTGTGGCCAAGCCCC 2880
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TCTAGAGGTTGTACCTGATGAAGATTTGAGTGGATACATCAGGCCCAGTTACTCCCAATC 2940
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CAATCAATCCATGAACAACAGCCTAACGGAGTGGTCCTACGCGCCATCGAGCGATCCTTC 3000
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 GATCTTGCTGCAGAACAGTATGGAGAGTGGTTACCTCCCATCTTCAAGCTCCCCTTCTTC 3060
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AAAGCTGTGAGCTGCAGCACCAGGATTAGCTAGGATGAAATGTTGGCAATTGTTTTGAGC 3120
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CCAATGCAGCAACTGTACATATGCATATGCATTTGCTCTGTCTGTAATCCCCTGTAGTTT 3180
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 GGCATTCTGTCAGTTGTCCTCAGCCTTCTCATCCATGGCATATGACAATTGATATCAATG 3240
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 ATGCATTGCCATGATGATATATTCTTCACAAGGGGACTGGAAGCAGATATTGGAATCTGA 3300
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TGCTGCTGATGTGATGGTACATATGAATTGAGCAACTTCTCAGGGGCACCACTTGAGTTT 3360
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 CTTGTTTGTTAGCCTTGGTCATCATGTATCTAGTAAATGCAATGTACAACTAATCTGTGC 3420
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 AAATGTGGATATCTAGTAAGTTTTTTTTTTTCTTTTCTTTTCTAGCTAGGAAGGTTATTG 3480
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 TTTGGTGGGCAAGTAGAGAAGACATGTAACATAATAACAGTTCAGTGCAAACTAGTTTCT 3540
consensus_12581#1 ------------------------------------------------------------
consensus_12581#2 ------------------------------------------------------------
consensus_12581#0 GCCCTTGTTAACTTAAAAAAGAAGGAAAAAGTAC 3574
consensus_12581#1 ----------------------------------
consensus_12581#2 ----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||