cluster # 12583

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Oryza sativa
cluster # 12583 cluster # 12583 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12583#0 length = 2479 sequences # 10

consensus_12583#1 length = 694 sequences # 1

consensusID : consensus_12583#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2479
fasta sequence

                              [CCACAGCGGAAGAAGATTCCAACGAGAAGGCGAGCGAGAGAGAGGAGAAGAAACCAAGAGAGCGAGGGCGGAGGAAGCAGTCGAGCTCTCCCAGCCTCGGCGGCTAAACTCCCCCCCCCCCTCGCTTTCTTCCCCTCCTTCCTCAATCTCCAAGCCTCGATATCCGTGTTCTTCTCTGACCGAATCCGAATCCCGCGTTTCTTTGTTGCGCGCGCGACCGCCCGCGGGAATCTTGGTGGTTCTTGGGCGATCGTGATGGCATTGGATGGCGGCGGCGAGGTTGGCAGGAGGAGGAGGAGGAGGGGATGGGGAGGCGGGTTCCCGAGCCTGATGCGGCGGAAGCAGGTGGACTCCGACCGGGTCCGCGCCGCCGAGGGGGAAGGGCAACCCCAGCTCGCCAAGGAGCTTAACATCCCGGCGCTGGTCGCGATCGGTGTCGGTTCAACAATTGGAGCTGGGGTATATGTTCTTGTCGGAACAGTTGCTAGGGAGCATGCTGGTCCAGCATTGACAATTTCATTTCTGATAGCTGGAATAGCTTCCGCGCTCTCAGCCTTCTGTTATGCCGAGCTTGCTAGTCGGTGCCCATCTGCTGGAAGCGCCTACCATTATTCATACATCTGCGTTGGTGAAGGTGTTGCCTGGTTGATTGGTTGGGCTTTAGTGCTGGAATATACTATTGGTGGATCTGCTGTTGCCCGTGGCATATCCCCCAATCTTGCCTTGTTCTTTGGAGGACCAGACAGTCTTCCATGGATTTTATCACGCCACCAGCTTCCATGGTTTGATGTCATTGTTGATCCCTGTGCCGCTGCCCTCGTTTTTGTTGTTACTGTTTTGCTATGTGTTGGGATAAAAGAGAGTTCAGCTGTACAAGAGCTTATAACAGTTCTGAATGCTTGTGTGATGATATTTGTTATTGTAGCTGGTAGTTATATCGGCTTCCAGATAGGATGGGTTGGCTATAAAGTTACTGATGGATATTTTCCACATGGGATAAATGGAATGCTTGCTGGATCAGCAACTGTTTTCTTTGCATATATTGGCTTTGATACAGTTGCTAGTACTGCTGAGGAGGTGAAGAATCCACAGAGAGATCTACCACTGGGAATAGGAGCGGCATTGTCTATCTGCTGTTGCTTGTACATGATGGTTTCTGTTGTTATTGTTGGGCTGGTACCATATTTCGCTATGGACCCAGATACGCCCATTTCATCTGTCTTTGCGAAACATGGAATGCAGTGGGCCATGTATATTGTGACAAGTGGTGCTGTTCTTGCACTTTGTTCAACTTTGTTGGGGTCACTTCTTCCGCAGCCTAGAATACT-AATGGCGATGGCACGAGACGGGCTGCTGCCATCTTTCTTCGCCGATGTTAACAAGAGGACACAAGTTCCTGTAAAGAGCACAGTCGTGACTGGTCTCTGTGCAGCAGCTCTGGCTTTTTTCATGGATGTTTCCCAGCTGGCAGGAATGGTCAGTGTAGGTACACTCCTTGCATTCACCATAGTTGCTGTCTCGATCTTAATACTCAGATATATTCCTCCGGATGAGGTTCCTCTGCCTTCATCTCTGCAAGAAACATTCTGTTTGAGCCAAGAATATGATGAGGAAAGGGTTAGCGGTATTCTTGGAGATGAGAGATGCAAAACATCTGAAACAAAGGATGTGATTCTCGCAGAATCTATGGAGGATCCTCTCATTGAGAAGAAAATAACAAGAAAGATGGACGAGATGAAGCGTCGGAAGGTGGCCGCTTTCAGCATAGGATCTGTTTGTGTTGGAGTTATGGTTCTCACATCCGCAGCTTCTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTGGCTGCATCGTTGGCGCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGGCATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTT-TCGTTCCACTTCTGCCAGTCTTGTCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTAGGCATATGGCT-GCT-GATAGGCGTCTTGGTGTACATTTTGTACGGACGAACTAACAGCTCCTTGAAGGATGTCATCTACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCTGGATATGTGTCCTAGAAAAAAATATTTTTTAGTTTGCACTATTCTTCAGTGACAACATGCCTCACCTGTCTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATACTTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAACCCAATTGGACAGTGGAATACATGATTTTGTGTATATAAGCCCT-TTGTACTAAATGGTAAACTGAAAAGCAGTTATCGATGAAAAAAAAGTGCAATAGACGAAGTACTACTATACTTATATCCCTAAAAAAAAAAAAAAAA]

[+] EMBL AK066436             [CCACAGCGGAAGAAGATTCCAACGAGAAGGCGAGCGAGAGAGAGGAGAAGAAACCAAGAGAGCGAGGGCGGAGGAAGCAGTCGAGCTCTCCCAGCCTCGGCGGCTAAACTCCCCCCCCCCCTCGCTTTCTTCCCCTCCTTCCTCAATCTCCAAGCCTCGATATCCGTGTTCTTCTCTGACCGAATCCGAATCCCGCGTTTCTTTGTTGCGCGCGCGACCGCCCGCGGGAATCTTGGTGGTTCTTGGGCGATCGTGATGGCATTGGATGGCGGCGGCGAGGTTGGCAGGAGGAGGAGGAGGAGGGGATGGGGAGGCGGGTTCCCGAGCCTGATGCGGCGGAAGCAGGTGGACTCCGACCGGGTCCGCGCCGCCGAGGGGGAAGGGCAACCCCAGCTCGCCAAGGAGCTTAACATCCCGGCGCTGGTCGCGATCGGTGTCGGTTCAACAATTGGAGCTGGGGTATATGTTCTTGTCGGAACAGTTGCTAGGGAGCATGCTGGTCCAGCATTGACAATTTCATTTCTGATAGCTGGAATAGCTTCCGCGCTCTCAGCCTTCTGTTATGCCGAGCTTGCTAGTCGGTGCCCATCTGCTGGAAGCGCCTACCATTATTCATACATCTGCGTTGGTGAAGGTGTTGCCTGGTTGATTGGTTGGGCTTTAGTGCTGGAATATACTATTGGTGGATCTGCTGTTGCCCGTGGCATATCCCCCAATCTTGCCTTGTTCTTTGGAGGACCAGACAGTCTTCCATGGATTTTATCACGCCACCAGCTTCCATGGTTTGATGTCATTGTTGATCCCTGTGCCGCTGCCCTCGTTTTTGTTGTTACTGTTTTGCTATGTGTTGGGATAAAAGAGAGTTCAGCTGTACAAGAGCTTATAACAGTTCTGAATGCTTGTGTGATGATATTTGTTATTGTAGCTGGTAGTTATATCGGCTTCCAGATAGGATGGGTTGGCTATAAAGTTACTGATGGATATTTTCCACATGGGATAAATGGAATGCTTGCTGGATCAGCAACTGTTTTCTTTGCATATATTGGCTTTGATACAGTTGCTAGTACTGCTGAGGAGGTGAAGAATCCACAGAGAGATCTACCACTGGGAATAGGAGCGGCATTGTCTATCTGCTGTTGCTTGTACATGATGGTTTCTGTTGTTATTGTTGGGCTGGTACCATATTTCGCTATGGACCCAGATACGCCCATTTCATCTGTCTTTGCGAAACATGGAATGCAGTGGGCCATGTATATTGTGACAAGTGGTGCTGTTCTTGCACTTTGTTCAACTTTGTTGGGGTCACTTCTTCCGCAGCCTAGAATACT AATGGCGATGGCACGAGACGGGCTGCTGCCATCTTTCTTCGCCGATGTTAACAAGAGGACACAAGTTCCTGTAAAGAGCACAGTCGTGACTGGTCTCTGTGCAGCAGCTCTGGCTTTTTTCATGGATGTTTCCCAGCTGGCAGGAATGGTCAGTGTAGGTACACTCCTTGCATTCACCATAGTTGCTGTCTCGATCTTAATACTCAGATATATTCCTCCGGATGAGGTTCCTCTGCCTTCATCTCTGCAAGAAACATTCTGTTTGAGCCAAGAATATGATGAGGAAAGGGTTAGCGGTATTCTTGGAGATGAGAGATGCAAAACATCTGAAACAAAGGATGTGATTCTCGCAGAATCTATGGAGGATCCTCTCATTGAGAAGAAAATAACAAGAAAGATGGACGAGATGAAGCGTCGGAAGGTGGCCGCTTTCAGCATAGGATCTGTTTGTGTTGGAGTTATGGTTCTCACATCCGCAGCTTCTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTGGCTGCATCGTTGGCGCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGGCATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTT TCGTTCCACTTCTGCCAGTCTTGTCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTAGGCATATGGCT GCT GATAGGCGTCTTGGTGTACATTTTGTACGGACGAACTAACAGCTCCTTGAAGGATGTCATCTACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCTGGATATGTGTCCTAGAAAAAAATATTTTTTAGTTTGCACTATTCTTCAGTGACAACATGCCTCACCTGTCTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATACTTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAACCCAATTGGACAGTGGAATACATGATTTTGTGTATATAAGCCCT TTGTACTAAATGGTAAACTGAAAAGCGGTTATCGATGAAAAAAAAGTGCAATAG                                           ]
[+] EMBL CB637530             [                     ACGAGAA GCGAGCGAGAGAGAGGAGAAGAAACCAAGAGAGCGAGGGCGGAGGAAGCAGTCGAGCTCTCCCAGCCTCGGCGGCTAAACTCCCCCCCCCCCTCGCTTTCTTCCCCTCCTTCCTCAATCTCCAAGCCTCGATATCCGTGTTCTTCTCTGACCGAATCCGAATCCCGCGTTTCTTTGTTGCGCGCGCGACCGCCCGCGGGAATCTTGGTGGTTCTTGGGCGATCGTGATGGCATTGGATGGCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK066471             [                                                                                                                                                                                                                                                                                                                                                                   ACCGGGTCCGCGCCGCCGAGGGGGAAGGGCAACCCCAGCTCGCCAAGGAGCTTAACATCCCGGCGCTGGTCGCGATCGGTGTCGGTTCAACAATTGGAGCTGGGGTATATGTTCTTGTCGGAACAGTTGCTAGGGAGCATGCTGGTCCAGCATTGACAATTTCATTTCTGATAGCTGGAATAGCTTCCGCGCTCTCAGCCTTCTGTTATGCCGAGCTTGCTAGTCGGTGCCCATCTGCTGGAAGCGCCTACCATTATTCATACATCTGCGTTGGTGAAGGTGTTGCCTGGTTGATTGGTTGGGCTTTAGTGCTGGAATATACTATTGGTGGATCTGCTGTTGCCCGTGGCATATCCCCCAATCTTGCCTTGTTCTTTGGAGGACCAGACAGTCTTCCATGGATTTTATCACGCCACCAGCTTCCATGGTTTGATGTCATTGTTGATCCCTGTGCCGCTGCCCTCGTTTTTGTTGTTACTGTTTTGCTATGTGTTGGGATAAAAGAGAGTTCAGCTGTACAAGAGCTTATAACAGTTCTGAATGCTTGTGTGATGATATTTGTTATTGTAGCTGGTAGTTATATCGGCTTCCAGATAGGATGGGTTGGCTATAAAGTTACTGATGGATATTTTCCACATGGGATAAATGGAATGCTTGCTGGATCAGCAACTGTTTTCTTTGCATATATTGGCTTTGATACAGTTGCTAGTACTGCTGAGGAGGTGAAGAATCCACAGAGAGATCTACCACTGGGAATAGGAGCGGCGTTGTCTATCTGCTGTTGCTTGTACATGATGGTTTCTGTTGTTATTGTTGGGCTGGTACCATATTTCGCTATGGACCCAGATACGCCCATTTCATCTGTCTTTGCGAAACATGGAATGCAGTGGGCCATGTATATTGTGACAAGTGGTGCTGTTCTTGCACTTTGTTCAACTTTGTTGGGGTCACTTCTTCCGCAGCCTAGAATACT AATGGCGATGGCACGAGACGGGCTGCTGCCATTTTTCTTCGCCGATGTTAACAAGAGGACACAAGTTCCTGTAAAGAGCACAGTCGTGACTGGTCTCTGTGCAGCAGCTCTGGCTTTTTTCATGGATGTTTCCCAGCTGGCAGGAATGGTCAGTGTAGGTACACTCCTTGCATTCACCATAGTTGCTGTCTCGATCTTAATACTCAGATATATTCCTCCGGATGAGGTTCCTCTGCCTTCATCTCTGCAAGAAACATTCTGTTTGAGCCAAGAATATGATGAGGAAAGGGTTAGCGGTATTCTTGGAGATGAGAGATGCAAAACATCTGAAACAAAGGATGTGATTCTCGCAGAATCTATGGAGGATCCTCTCATTGAGAAGAAAATAACAAGAAAGATGGACGAGATGAAGCGTCGGAAGGTGGCCGCTTTCAGCATAGGATCTGTTTGTGTTGGAGTTATGGTTCTCACATCCGCAGCTTCTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTGGCTGCATCGTTGGCGCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGGCATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTT TCGTTCCACTTCTGCCAGTCTTGTCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTAGGCATATGGCT GCT GATAGGCGTCTTGGTGTACATTTTGTACGGACGAACTAACAGCTCCTTGAAGGATGTCATCTACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCTGGATATGTGTCCTAGAAAAAAGTATTTTTTAGTTTGCACTATTCTTCAGTGACAACATGCCTCACCTGTCTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATACTTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAACCCAATTGGACAGTGGAATACATGATTTTGTGTATATAAGCCCT TTGTACTAAATGGTAAACTGAAAAGCAGTTATCGATGAAAAAAAAGTGCAATAGACGAAGTACT                                 ]
[+] EMBL OSS14731A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTGCATATATTGGCTTTNATACAGTTGCTAGTACTGCTGAGGAGGTGAAGAATCCACAGAGAGATCTACCACTGGGAATAGGAGCGGCATTGTCTATCTGCTGTTGCTTGTACATGATGGNCTCTGTNGTTATTGTTGGGCTGGTACCATATTTNGCTATGGACCCAGATACGCCCATTTNATCTGTCTTTGCGAAACATGGAATGCAGTGGGCCATGTATATTGTNACAAGTGGTGCTGTTCTTGCACTTTGTTCAACTTTGTTGGGGTCACTTCTTNCGCAGCCTAGAATACTAAATGGCGATGGCACGAGACGGGCTGCTGNCATCTTTCNTCGCCGATGTT ACAAGAGG CACAAGTCCCTGTAAAGAGCACAGTCGTGACTGGTCTCTGTGCANCAG TCTGGC TTTTTAATGGATGTTTCCCACCT GAAGGAt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU057237             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAACATCTGAAACAAAGGATGTGATTCTCGCAGAATCTATGGAGGATCCTCTCATTGAGAAGAAAATAACAAGAAAGATGGACGAGATGAAGCGTCGGAAGGTGGCCGCTTTCAGCATAGGATCTGTTTGTGTTGGAGTTATGGTTCTCACATCCGCAGCTTCTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTGGCTGCATCGTTGGCGCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGGCATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTT TCGTTCCACTTCTGCCAGTCTTGTCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTAGGCATATGGCTGGCTGGATAGGCGTCTTGGTGTACATTT                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSS11524A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAAGATGGACGAGATGAAGCGTCGGAAGGTGGCCGCTTTCAGCATAGGATCTGTTTGTGTTGGAGTTATGGTTCTCACATCCGCAGCTTCTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTNGCTGCATCGTTGGCGCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGGCATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTT TCGNTCCANTTCTGCCANTCTTGTCTATCCTCGNAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU096693             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGTTATGGTTCTCACATCCGCAGCTTCTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTGGCTGCATCGTTGGCGCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGGCATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTT TCGTTCCACTTCTGCCAGTCTTGTCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTAGGCATATGGCT GCT GATAGGCGTCTTGGTGTACATTTTGTACGGACGAACTAACAGCTCCTTGAAGGATGTCATCTACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCTGGATATGTGTCCTAGAAAAAAATATTTTTTAGTTTGCACTATTCTTCAGTGACAACATGCCTCACCTGTCTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATACTTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAACCCAATTGGACAGTGGAATACATGATTTTGTGTATATAAGCCCT TTGTACTAAATGGTAAACTGAAAAGCAGTTATCGATGAAAAAAAAGTGCAATAGACGAAGTACTACTATACTTATATCCCTAAAAAAAAAAAAAAAA]
[+] EMBL AU057238             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCTGGAGGATTTACATGCCCTT TCGTTCCACTTCTGCCAGTCTTGTCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTAGGCATATGGCT GCT GATAGGCGTCTTGGTGTACATTTTGTACGGACGAACTAACAGCTCCTTGAAGGATGTCATCTACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCTGGATATGTGTCCTAGAAAAAAATATTTTTTAGTTTGCACTATTCTTCAGTGACAACATGCCTCACCTGTCTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATACTTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAACCCAATTGGACAGTGGAATAaaaaaaaa                                                                                                                  ]
[+] EMBL AU095908             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTACATGCCCTTATCGTTCCACTTCTGCCAGTCTTGTCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTAGGCATATGGCT GCT GATAGGCGTCTTGGTGTACATTTTGTACGGNCGAACTAACAGCNCCTTGAAGGATGTCATCTACGTCCCCGTAGCGCAGGCCGATGAGATATACANGAGTTCATCTGGATATGTGTCCTAGAAAAAANTATTTTTTAGTTTGCACTATTCTTCAGTGACAACATGCCTCACCTGTCTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATACTTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAACCCAATTGGACAGTGGAATACATGATTTTGTGTATATAAGCCCT TTGTACTAAATGGTAAACTGAAAAGCAGTTATCGATGAAAAAAAAGTGCAATAGACGAAGTACTACTATACTTATA     AAAAAAAAAAAAA   ]
[-] EMBL CB637531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGCATATGGCT GCT GATAGGCGTCTTGGTGGACAATTTGTACGGACGAACAAACAGCTCCTTGAAGAATGTCATATACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCTGGATATGTGTCCTAGAAAAAAATATTTTTTAGTTTGCACTATTCTTCAGTGACAACATGCCTCACCTGTCTGCAATTGGAAGATTAGCCTGGACAAAGGAGATGCTCAATCATTCATACTTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAACCCAATTGGACAGTGGAATACATGATTTTGTGTAAATAAGCCCTCTTGTAATAAATGGTAAAATGAAAAACAG                                                                     ]




>consensus_12583#0
CCACAGCGGAAGAAGATTCCAACGAGAAGGCGAGCGAGAGAGAGGAGAAGAAACCAAGAG
AGCGAGGGCGGAGGAAGCAGTCGAGCTCTCCCAGCCTCGGCGGCTAAACTCCCCCCCCCC
CTCGCTTTCTTCCCCTCCTTCCTCAATCTCCAAGCCTCGATATCCGTGTTCTTCTCTGAC
CGAATCCGAATCCCGCGTTTCTTTGTTGCGCGCGCGACCGCCCGCGGGAATCTTGGTGGT
TCTTGGGCGATCGTGATGGCATTGGATGGCGGCGGCGAGGTTGGCAGGAGGAGGAGGAGG
AGGGGATGGGGAGGCGGGTTCCCGAGCCTGATGCGGCGGAAGCAGGTGGACTCCGACCGG
GTCCGCGCCGCCGAGGGGGAAGGGCAACCCCAGCTCGCCAAGGAGCTTAACATCCCGGCG
CTGGTCGCGATCGGTGTCGGTTCAACAATTGGAGCTGGGGTATATGTTCTTGTCGGAACA
GTTGCTAGGGAGCATGCTGGTCCAGCATTGACAATTTCATTTCTGATAGCTGGAATAGCT
TCCGCGCTCTCAGCCTTCTGTTATGCCGAGCTTGCTAGTCGGTGCCCATCTGCTGGAAGC
GCCTACCATTATTCATACATCTGCGTTGGTGAAGGTGTTGCCTGGTTGATTGGTTGGGCT
TTAGTGCTGGAATATACTATTGGTGGATCTGCTGTTGCCCGTGGCATATCCCCCAATCTT
GCCTTGTTCTTTGGAGGACCAGACAGTCTTCCATGGATTTTATCACGCCACCAGCTTCCA
TGGTTTGATGTCATTGTTGATCCCTGTGCCGCTGCCCTCGTTTTTGTTGTTACTGTTTTG
CTATGTGTTGGGATAAAAGAGAGTTCAGCTGTACAAGAGCTTATAACAGTTCTGAATGCT
TGTGTGATGATATTTGTTATTGTAGCTGGTAGTTATATCGGCTTCCAGATAGGATGGGTT
GGCTATAAAGTTACTGATGGATATTTTCCACATGGGATAAATGGAATGCTTGCTGGATCA
GCAACTGTTTTCTTTGCATATATTGGCTTTGATACAGTTGCTAGTACTGCTGAGGAGGTG
AAGAATCCACAGAGAGATCTACCACTGGGAATAGGAGCGGCATTGTCTATCTGCTGTTGC
TTGTACATGATGGTTTCTGTTGTTATTGTTGGGCTGGTACCATATTTCGCTATGGACCCA
GATACGCCCATTTCATCTGTCTTTGCGAAACATGGAATGCAGTGGGCCATGTATATTGTG
ACAAGTGGTGCTGTTCTTGCACTTTGTTCAACTTTGTTGGGGTCACTTCTTCCGCAGCCT
AGAATACTAATGGCGATGGCACGAGACGGGCTGCTGCCATCTTTCTTCGCCGATGTTAAC
AAGAGGACACAAGTTCCTGTAAAGAGCACAGTCGTGACTGGTCTCTGTGCAGCAGCTCTG
GCTTTTTTCATGGATGTTTCCCAGCTGGCAGGAATGGTCAGTGTAGGTACACTCCTTGCA
TTCACCATAGTTGCTGTCTCGATCTTAATACTCAGATATATTCCTCCGGATGAGGTTCCT
CTGCCTTCATCTCTGCAAGAAACATTCTGTTTGAGCCAAGAATATGATGAGGAAAGGGTT
AGCGGTATTCTTGGAGATGAGAGATGCAAAACATCTGAAACAAAGGATGTGATTCTCGCA
GAATCTATGGAGGATCCTCTCATTGAGAAGAAAATAACAAGAAAGATGGACGAGATGAAG
CGTCGGAAGGTGGCCGCTTTCAGCATAGGATCTGTTTGTGTTGGAGTTATGGTTCTCACA
TCCGCAGCTTCTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTGGCTGCATCGTTGGC
GCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGG
CATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTTTCGTTCCACTTCTGCCAGTCTTG
TCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTA
GGCATATGGCTGCTGATAGGCGTCTTGGTGTACATTTTGTACGGACGAACTAACAGCTCC
TTGAAGGATGTCATCTACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCT
GGATATGTGTCCTAGAAAAAAATATTTTTTAGTTTGCACTATTCTTCAGTGACAACATGC
CTCACCTGTCTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATACT
TGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAACC
CAATTGGACAGTGGAATACATGATTTTGTGTATATAAGCCCTTTGTACTAAATGGTAAAC
TGAAAAGCAGTTATCGATGAAAAAAAAGTGCAATAGACGAAGTACTACTATACTTATATC
CCTAAAAAAAAAAAAAAAA

consensusID : consensus_12583#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence

                              [GGATCTGTTTGTGTNGGAGTTATGGTTCTCACATCNGCAGCTTTTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTGGCTGCATCGTTGGCGCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGGCATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTTTCGTTCCACTTCTGCCAGTCTTGTCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTAGGCATATGGCTGCTGATAGGCGTCTTGGTGTACATTTTGTACGGACGAACTAACAGCTCCTTGAAGGATGTCATTTACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCTGGATATGTGTCCTAGAAAAAAAATATTTTTTAGTTTGCACTATTTTTCAGTGACAACATGCCTCACCTGTTTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATACTTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAACCCAATTGGACAGTGGAATACATGATTTTGTGTATATAAGCCCTTTGTACTAAATGGTAAACTGAAAAGCAGTTATCGATGAAAAAAAAAGTGCAATAGACGAAGTAAAAAAAAAAAAAAAA]

[-] EMBL CA759465             [GGATCTGTTTGTGTNGGAGTTATGGTTCTCACATCNGCAGCTTTTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTGGCTGCATCGTTGGCGCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGGCATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTTTCGTTCCACTTCTGCCAGTCTTGTCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTAGGCATATGGCTGCTGATAGGCGTCTTGGTGTACATTTTGTACGGACGAACTAACAGCTCCTTGAAGGATGTCATTTACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCTGGATATGTGTCCTAGAAAAAAAATATTTTTTAGTTTGCACTATTTTTCAGTGACAACATGCCTCACCTGTTTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATACTTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAACCCAATTGGACAGTGGAATACATGATTTTGTGTATATAAGCCCTTTGTACTAAATGGTAAACTGAAAAGCAGTTATCGATGAAAAAAAAAGTGCAATAGACGAAGTAAAAAAAAAAAAAAAA]




>consensus_12583#1
GGATCTGTTTGTGTNGGAGTTATGGTTCTCACATCNGCAGCTTTTGCCACATGGCTGCCT
TTTCTTCCTATGTGTATTGGCTGCATCGTTGGCGCTCTGTTGCTTGTAGCCGGTCTTGGC
CTCCTCTGCTGGATCGACCAAGATGATGGCAGGCATTCTTTCGGCCAATCTGGAGGATTT
ACATGCCCTTTCGTTCCACTTCTGCCAGTCTTGTCTATCCTCGTAAACACATACCTGTTG
ATAAATCTGGGTGGAGAGGCATGGATGAGAGTAGGCATATGGCTGCTGATAGGCGTCTTG
GTGTACATTTTGTACGGACGAACTAACAGCTCCTTGAAGGATGTCATTTACGTCCCCGTA
GCGCAGGCCGATGAGATATACAAGAGTTCATCTGGATATGTGTCCTAGAAAAAAAATATT
TTTTAGTTTGCACTATTTTTCAGTGACAACATGCCTCACCTGTTTGCAATTGGAAGATTA
GCCTGGACAGAGGAGATGCTAAATCATTCATACTTGGGGAAAAAACATGGATGCAATATT
ATATTTAGGATGTGCATAGGTGTATATATAAACCCAATTGGACAGTGGAATACATGATTT
TGTGTATATAAGCCCTTTGTACTAAATGGTAAACTGAAAAGCAGTTATCGATGAAAAAAA
AAGTGCAATAGACGAAGTAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12583#0      CCACAGCGGAAGAAGATTCCAACGAGAAGGCGAGCGAGAGAGAGGAGAAGAAACCAAGAG 60
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      AGCGAGGGCGGAGGAAGCAGTCGAGCTCTCCCAGCCTCGGCGGCTAAACTCCCCCCCCCC 120
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      CTCGCTTTCTTCCCCTCCTTCCTCAATCTCCAAGCCTCGATATCCGTGTTCTTCTCTGAC 180
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      CGAATCCGAATCCCGCGTTTCTTTGTTGCGCGCGCGACCGCCCGCGGGAATCTTGGTGGT 240
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      TCTTGGGCGATCGTGATGGCATTGGATGGCGGCGGCGAGGTTGGCAGGAGGAGGAGGAGG 300
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      AGGGGATGGGGAGGCGGGTTCCCGAGCCTGATGCGGCGGAAGCAGGTGGACTCCGACCGG 360
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      GTCCGCGCCGCCGAGGGGGAAGGGCAACCCCAGCTCGCCAAGGAGCTTAACATCCCGGCG 420
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      CTGGTCGCGATCGGTGTCGGTTCAACAATTGGAGCTGGGGTATATGTTCTTGTCGGAACA 480
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      GTTGCTAGGGAGCATGCTGGTCCAGCATTGACAATTTCATTTCTGATAGCTGGAATAGCT 540
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      TCCGCGCTCTCAGCCTTCTGTTATGCCGAGCTTGCTAGTCGGTGCCCATCTGCTGGAAGC 600
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      GCCTACCATTATTCATACATCTGCGTTGGTGAAGGTGTTGCCTGGTTGATTGGTTGGGCT 660
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      TTAGTGCTGGAATATACTATTGGTGGATCTGCTGTTGCCCGTGGCATATCCCCCAATCTT 720
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      GCCTTGTTCTTTGGAGGACCAGACAGTCTTCCATGGATTTTATCACGCCACCAGCTTCCA 780
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      TGGTTTGATGTCATTGTTGATCCCTGTGCCGCTGCCCTCGTTTTTGTTGTTACTGTTTTG 840
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      CTATGTGTTGGGATAAAAGAGAGTTCAGCTGTACAAGAGCTTATAACAGTTCTGAATGCT 900
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      TGTGTGATGATATTTGTTATTGTAGCTGGTAGTTATATCGGCTTCCAGATAGGATGGGTT 960
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      GGCTATAAAGTTACTGATGGATATTTTCCACATGGGATAAATGGAATGCTTGCTGGATCA 1020
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      GCAACTGTTTTCTTTGCATATATTGGCTTTGATACAGTTGCTAGTACTGCTGAGGAGGTG 1080
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      AAGAATCCACAGAGAGATCTACCACTGGGAATAGGAGCGGCATTGTCTATCTGCTGTTGC 1140
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      TTGTACATGATGGTTTCTGTTGTTATTGTTGGGCTGGTACCATATTTCGCTATGGACCCA 1200
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      GATACGCCCATTTCATCTGTCTTTGCGAAACATGGAATGCAGTGGGCCATGTATATTGTG 1260
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      ACAAGTGGTGCTGTTCTTGCACTTTGTTCAACTTTGTTGGGGTCACTTCTTCCGCAGCCT 1320
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      AGAATACTAATGGCGATGGCACGAGACGGGCTGCTGCCATCTTTCTTCGCCGATGTTAAC 1380
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      AAGAGGACACAAGTTCCTGTAAAGAGCACAGTCGTGACTGGTCTCTGTGCAGCAGCTCTG 1440
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      GCTTTTTTCATGGATGTTTCCCAGCTGGCAGGAATGGTCAGTGTAGGTACACTCCTTGCA 1500
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      TTCACCATAGTTGCTGTCTCGATCTTAATACTCAGATATATTCCTCCGGATGAGGTTCCT 1560
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      CTGCCTTCATCTCTGCAAGAAACATTCTGTTTGAGCCAAGAATATGATGAGGAAAGGGTT 1620
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      AGCGGTATTCTTGGAGATGAGAGATGCAAAACATCTGAAACAAAGGATGTGATTCTCGCA 1680
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      GAATCTATGGAGGATCCTCTCATTGAGAAGAAAATAACAAGAAAGATGGACGAGATGAAG 1740
consensus_12583#1      ------------------------------------------------------------
                                                                                   

consensus_12583#0      CGTCGGAAGGTGGCCGCTTTCAGCATAGGATCTGTTTGTGTTGGAGTTATGGTTCTCACA 1800
consensus_12583#1      ---------------------------GGATCTGTTTGTGTNGGAGTTATGGTTCTCACA 33
                                                  ************** ******************

consensus_12583#0      TCCGCAGCTTCTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTGGCTGCATCGTTGGC 1860
consensus_12583#1      TCNGCAGCTTTTGCCACATGGCTGCCTTTTCTTCCTATGTGTATTGGCTGCATCGTTGGC 93
                       ** ******* *************************************************

consensus_12583#0      GCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGG 1920
consensus_12583#1      GCTCTGTTGCTTGTAGCCGGTCTTGGCCTCCTCTGCTGGATCGACCAAGATGATGGCAGG 153
                       ************************************************************

consensus_12583#0      CATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTTTCGTTCCACTTCTGCCAGTCTTG 1980
consensus_12583#1      CATTCTTTCGGCCAATCTGGAGGATTTACATGCCCTTTCGTTCCACTTCTGCCAGTCTTG 213
                       ************************************************************

consensus_12583#0      TCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTA 2040
consensus_12583#1      TCTATCCTCGTAAACACATACCTGTTGATAAATCTGGGTGGAGAGGCATGGATGAGAGTA 273
                       ************************************************************

consensus_12583#0      GGCATATGGCTGCTGATAGGCGTCTTGGTGTACATTTTGTACGGACGAACTAACAGCTCC 2100
consensus_12583#1      GGCATATGGCTGCTGATAGGCGTCTTGGTGTACATTTTGTACGGACGAACTAACAGCTCC 333
                       ************************************************************

consensus_12583#0      TTGAAGGATGTCATCTACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCT 2160
consensus_12583#1      TTGAAGGATGTCATTTACGTCCCCGTAGCGCAGGCCGATGAGATATACAAGAGTTCATCT 393
                       ************** *********************************************

consensus_12583#0      GGATATGTGTCCTAGAAAAAAA-TATTTTTTAGTTTGCACTATTCTTCAGTGACAACATG 2219
consensus_12583#1      GGATATGTGTCCTAGAAAAAAAATATTTTTTAGTTTGCACTATTTTTCAGTGACAACATG 453
                       ********************** ********************* ***************

consensus_12583#0      CCTCACCTGTCTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATAC 2279
consensus_12583#1      CCTCACCTGTTTGCAATTGGAAGATTAGCCTGGACAGAGGAGATGCTAAATCATTCATAC 513
                       ********** *************************************************

consensus_12583#0      TTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAAC 2339
consensus_12583#1      TTGGGGAAAAAACATGGATGCAATATTATATTTAGGATGTGCATAGGTGTATATATAAAC 573
                       ************************************************************

consensus_12583#0      CCAATTGGACAGTGGAATACATGATTTTGTGTATATAAGCCCTTTGTACTAAATGGTAAA 2399
consensus_12583#1      CCAATTGGACAGTGGAATACATGATTTTGTGTATATAAGCCCTTTGTACTAAATGGTAAA 633
                       ************************************************************

consensus_12583#0      CTGAAAAGCAGTTATCGATGAAAAAAAA-GTGCAATAGACGAAGTACTACTATACTTATA 2458
consensus_12583#1      CTGAAAAGCAGTTATCGATGAAAAAAAAAGTGCAATAGACGAAGTA-------------- 679
                       **************************** *****************              

consensus_12583#0      TCCCTAAAAAAAAAAAAAAAA 2479
consensus_12583#1      -----AAAAAAAAAAAAAAA- 694
                            ***************