These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12587#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2366 fasta sequence [TTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCGCGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTCCCGCTCACGCTCGCCTACTCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAAC-GGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACC-GTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCACCAGGATCCAC-GATTCCAACCTGATCTCTCCAGTACATATTCACCAGTAAAATGC-AATGTTGATTGTAC--TTGTGATAATGAGAGGAGTCAATGCACTTATGAGAGGCAGTATGCTGAAATGAGCTCCAGCAGTGGTGTGCTTGGCGAGGACATTATGTCATTTGGCAAAGAAAGTGAACTTAAGCCACGGCGTGCTGTTTTTGGCTGTGAAAACACCGAAACAGGAGATTTGTTCAGTCAACATGCTGATGGTATTATGGGGCTGGGCCGTGGTCAACTTAGCATAATGGATCAGCTTGTTGAGAAGGGTGTCATTAGTGATTCATTCTCTCTGTGCTATGGTGGAATGGATGTTGGTGGTGGTACTATGGTACTTGGTGGGATGCCTGCTCCTCCTGACATGGTTTTCTCTCATTCAAACCCTGTCCGCAGCCCGTATTACAACATTGAGTTAAAGGAAATACATGTTGCCGGAAAGGCATTGCGGTTAGACCCAAAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTTCGAGTTATGAATGTTACAAGCCAAGGAAACTCTACTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAGCAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCAGTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAATTTG-GAGTGGTTCAACGGAGTAAACATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCACATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGAAGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGTCTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAGAAGAAGGTTTTGTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCTTCTACAGTATTTTCACGTTTCA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAGACTAGTTCTCT] [+] EMBL AK099740 [TTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCGCGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTCCCGCTCACGCTCGCCTACTCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAAC GGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACC GTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCACCAGGATCCAC GATTCCAACCTGATCTCTCCAGTACATATTCACCAGTAAAATGC AATGTTGATTGTAC TTGTGATAATGAGAGGAGTCAATGCACTTATGAGAGGCAGTATGCTGAAATGAGCTCCAGCAGTGGTGTGCTTGGCGAGGACATTATGTCATTTGGCAAAGAAAGTGAACTTAAGCCACGGCGTGCTGTTTTTGGCTGTGAAAACACCGAAACAGGAGATTTGTTCAGTCAACATGCTGATGGTATTATGGGGCTGGGCCGTGGTCAACTTAGCATAATGGATCAGCTTGTTGAGAAGGGTGTCATTAGTGATTCATTCTCTCTGTGCTATGGTGGAATGGATGTTGGTGGTGGTACTATGGTACTTGGTGGGATGCCTGCTCCTCCTGACATGGTTTTCTCTCATTCAAACCCTGTCCGCAGCCCGTATTACAACATTGAGTTAAAGGAAATACATGTTGCCGGAAAGGCATTGCGGTTAGACCCAAAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTTCGAGTTATGAATGTTACAAGCCAAGGAAACTCTACTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAGCAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCAGTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAATTTG GAGTGGTTCAACGGAGTAAACATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCACATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGAAGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGTCTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAGAAGAAGGTTTTGTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATA ] [-] EMBL BI811127 [ aGCGGCTGCCGCTGGTGCTCCCGCTCA GCTCGCCTAC CCAACGCCA CCGCCTCCCCGCCTCCTCGGCCAGGCGCGG CTCGGTGATGGACACAA CCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAACTGGGTATTACACGA GAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACCTGTCACCTACGTTCCCTGTGCCA CTGCGAGCAGTGCGG AAACACCAGGATCCACAGATTCCAACTGGATCTCTCCAGTACATATTCACCAGTAAAATGCAAATGTTGATTGTACCTTTGTGATAATGA ] [+] EMBL CF326551 [ TTTTCTCTCATTCAAACCCTGTCCGCAGCCCGTATTACAACATTGAGTTAAAGGAAATACATGTTGCCGGAAAGGCATTGCGGTTAGACCCAAAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGC ] [+] EMBL AK061647 [ AACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCCGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTAATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTTCGAGTTATGAATGTTACAAGCCAAGGAAACTCTACTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAGCAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCAGTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAATTTG GAGTGGTTCAACGGAGTAAACATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCACATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGAAGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGTCTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAGAAGAAGGTTTTGTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGAT ] [-] EMBL CF324947 [ TACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAATTTGNGAGTGGTTCAACGGAGTAAACATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCACATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGAAGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGTCTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAGAAGAAGGTTTTGTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCc ] [-] EMBL CF323821 [ TTCAACGGAGTAAACATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCACATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGAAGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGTCTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAAAAAAAGGTTTTGTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCTTCTACAGTGTTTTCACGTTTCATTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAGACTAGTTCTCT] [+] EMBL CF314212 [ GTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCTTCTACAGTATTTTCACGTTTCA AAAAAAAAAAAAAAAAAAAAA ] [-] EMBL CF314211 [ TTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCCCAAAAGCCCAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCTTTTACAGTATTTTCACGTTTCA AAAAAAAAAAAAAAAAAAAAAA ] consensusID : consensus_12587#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 794 fasta sequence [TCCTTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCGCGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTCCCGCTCACGCTCGCCTACCCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAACGGGTCGGTACAGTTCGTTTTTTGCCCTCCGCTCTCTCTCTCTCGATAATTTCCCCCAAATTTTTTTTTCTTGGGGGGGTTGCGTGGTTGGATCTGAGGCTGGATGTCGCCGCGTGTTGTTCGTGCTGGTTTAGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACCGTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCACCAGGTCGGCCTGGATTCGTCAAATTCTCTGCTTACCTGTTTGAATTGTGTGTGACGATCGGTTTAATTAGGATTGGTGATGGTCGCGTGTATGGATATTGGATTCCCATATGTCAAACTGTCGCTTGACCATTCAGGTTGGACAATTGACTCCAGTGCAAATGATACATTTTTGTCGGGCTTGGGTGTGTGCATAGACATTTATTGTTCCAAAATTCAAAGTCTTGGAAAATACACGTTT] [+] EMBL AK110717 [TCCTTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCGCGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTCCCGCTCACGCTCGCCTACCCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAACGGGTCGGTACAGTTCGTTTTTTGCCCTCCGCTCTCTCTCTCTCGATAATTTCCCCCAAATTTTTTTTTCTTGGGGGGGTTGCGTGGTTGGATCTGAGGCTGGATGTCGCCGCGTGTTGTTCGTGCTGGTTTAGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACCGTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCACCAGGTCGGCCTGGATTCGTCAAATTCTCTGCTTACCTGTTTGAATTGTGTGTGACGATCGGTTTAATTAGGATTGGTGATGGTCGCGTGTATGGATATTGGATTCCCATATGTCAAACTGTCGCTTGACCATTCAGGTTGGACAATTGACTCCAGTGCAAATGATACATTTTTGTCGGGCTTGGGTGTGTGCATAGACATTTATTGTTCCAAAATTCAAAGTCTTGGAAAATACACGTTT] consensusID : consensus_12587#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 400 fasta sequence [TCACTCTACACTAGCCTGTTTAGAGATATACCATTATAAACTATAAAGTTCTCTCTCCCAAACACTATTCTTATACTGATCAGTGGCTTTAGCGTGTAGTTGTAGTATGCAATGGGGCTTCCTGGCAAACATGGAAAACCTGAATATCTGTCAAAGTGCTTAAGCAAGATTCTCACATCTATTANNTTTTNTCATTTTCACCAATTCCCTTGAATATTTCTTGTGCGGGGGNGATGCATCANCCCCCCCCATTTTCATCTGCTGGAGAACTTACATTCGGTAATTATTTCTACAGGNNANNAAAAAAANATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATT] [+] EMBL CA766400 [TCACTCTACACTAGCCTGTTTAGAGATATACCATTATAAACTATAAAGTTCTCTCTCCCAAACACTATTCTTATACTGATCAGTGGCTTTAGCGTGTAGTTGTAGTATGCAATGGGGCTTCCTGGCAAACATGGAAAACCTGAATATCTGTCAAAGTGCTTAAGCAAGATTCTCACATCTATTANNTTTTNTCATTTTCACCAATTCCCTTGAATATTTCTTGTGCGGGGGNGATGCATCANCCCCCCCCATTTTCATCTGCTGGAGAACTTACATTCGGTAATTATTTCTACAGGNNANNAAAAAAANATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATT] consensusID : consensus_12587#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 316 fasta sequence [CCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTAAGGGTGACCCATAGTCTGTGCTGTTGTGGTTTTTCTAGTTT] [+] EMBL OSC111331 [CCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTAAGGGTGACCCATAGTCTGTGCTGTTGTGGTTTTTCTAGTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12587#0 TTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCGCGTCGG 60 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 CTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCC 120 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTC 180 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 CCGCTCACGCTCGCCTACTCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGC 240 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 CTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAAC 300 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTG 360 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GACTCCGGGAGCACCGTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCAC 420 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 CAGGATCCACGATTCCAACCTGATCTCTCCAGTACATATTCACCAGTAAAATGCAATGTT 480 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GATTGTACTTGTGATAATGAGAGGAGTCAATGCACTTATGAGAGGCAGTATGCTGAAATG 540 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 AGCTCCAGCAGTGGTGTGCTTGGCGAGGACATTATGTCATTTGGCAAAGAAAGTGAACTT 600 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 AAGCCACGGCGTGCTGTTTTTGGCTGTGAAAACACCGAAACAGGAGATTTGTTCAGTCAA 660 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 CATGCTGATGGTATTATGGGGCTGGGCCGTGGTCAACTTAGCATAATGGATCAGCTTGTT 720 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GAGAAGGGTGTCATTAGTGATTCATTCTCTCTGTGCTATGGTGGAATGGATGTTGGTGGT 780 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GGTACTATGGTACTTGGTGGGATGCCTGCTCCTCCTGACATGGTTTTCTCTCATTCAAAC 840 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 CCTGTCCGCAGCCCGTATTACAACATTGAGTTAAAGGAAATACATGTTGCCGGAAAGGCA 900 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ---TCCTTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCG 57 consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 TTGCGGTTAGACCCAAAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACC 960 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 CGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCT 117 consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 ACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAA 1020 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 TCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTG 177 consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCA 1080 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 GTGCTCCCGCTCACGCTCGCCTACCCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGG 237 consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTT 1140 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 CGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTC 297 consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTT 1200 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ACCAACGGGTCGGTACAGTTCGTTTTTTGCCCTCCGCTCTCTCTCTCTCGATAATTTCCC 357 consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGG 1260 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 CCAAATTTTTTTTTCTTGGGGGGGTTGCGTGGTTGGATCTGAGGCTGGATGTCGCCGCGT 417 consensus_12587#2 ---------TCACTCTACACTAGCCTGTTTAGAGATATACCATTATAAACTATAAAGTTC 51 consensus_12587#0 GGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTT 1320 consensus_12587#3 ----------------------------CCTATGACCGTCACAATGAGAAGATTGGCTTT 32 consensus_12587#1 GTTGTTCGTGCTGGTTTAGGTATTACACGACGAGGCTGT-ACATCGGGACGCCT--TCGC 474 consensus_12587#2 TCTCTCCCAAACACTATTCTTATACTGATCAGTGGCTTT---AGCGTGTAGTTG--TAGT 106 * * * * * * * consensus_12587#0 TGGAAAACTAACTGTTCA-GAGTTGTGGGAGAGGCTCCATATTAGTGAAGT---TCCTTC 1376 consensus_12587#3 TGGAAAACTAACTGTTCA-GAGTTGTGGGAGAGGCTCCATATTAGTGAAGT---TCCTTC 88 consensus_12587#1 AGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACCGTCACCTACGTTCCCTGCGCCACCT 534 consensus_12587#2 ATGCAATGGGGCTTCCTGGCAAACATGG-AAAACCTGAATATCTGTCAAAG---TGCTTA 162 * ** ** * * * * ** consensus_12587#0 ATCAGCACCTTCAGATTCAG-AGGGAGATATGG---CACCAGCTCCTGCTCCTAGTGGTT 1432 consensus_12587#3 ATCAGCACCTTCAGATTCAG-AGGGAGATATGG---CACCAGCTCCTGCTCCTAGTGGTT 144 consensus_12587#1 GCGAGCAGTGCGGCAACCACCAGGTCGGCCTGGATTCGTCAAATTCTCTGCTTACCTGTT 594 consensus_12587#2 AGCAAGATTCTCACATCTATTANNTTTTNTCATTTTCACCAATTCCCTTGAATATTTCTT 222 * * * * * * ** * * ** ** consensus_12587#0 TGC-CTGAATTTGATG--TTGGCCTAATCACTGTTGATA-------TGTCCATAAATGTT 1482 consensus_12587#3 TGC-CTGAATTTGATG--TTGGCCTAATCACTGTTGATA-------TGTCCATAAATGTT 194 consensus_12587#1 TGAATTGTGTGTGACGA-TCGGTTTAATTAGGATTGGTGATGGTCGCGTGTATGGATATT 653 consensus_12587#2 GTG--CGGGGGNGATGCATCANCCCCCCCCATTTTCAT--------CTGCTGGAGAACTT 272 * ** * * ** * * ** consensus_12587#0 ACTTATCCAAACCTGAAACC-TCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCT 1541 consensus_12587#3 ACTTATCCAAACCTGAAACC-TCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCT 253 consensus_12587#1 GGATTCCCATATGTCAAACTGTCGCTTGACCATTCAGGTTGGACAATTGACTCCAGTGCA 713 consensus_12587#2 ACATTCGGTAATT----ATTTCTACAGGNNANNAAAAAAANATCATGTAGTCTCTATACT 328 * * * * * * * consensus_12587#0 GGACATTGACTCCCGTCAG--GTTCGAGTT-ATGAATGTTA-CAAGCCAAGGAAACTCTA 1597 consensus_12587#3 GGACATTGACTCCCGTCAG--GTAAGGGTG-ACCCATAGTC-TGTGCTGTTGTGGTTTT- 308 consensus_12587#1 AATGATACATTTTTGTCGG--GCTTGGGTGTGTGCATAGACATTTATTGTTCCAAAATT- 770 consensus_12587#2 G--CTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGT- 385 * * * * * * * ** * consensus_12587#0 CTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAG 1657 consensus_12587#3 -TCTAGTTT--------------------------------------------------- 316 consensus_12587#1 -CAAAGTCTTGGAAAATACACGTTT----------------------------------- 794 consensus_12587#2 --CTGGAGAAAGAAATT------------------------------------------- 400 consensus_12587#0 CAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCA 1717 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATC 1777 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 ATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTT 1837 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 TAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATT 1897 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 CAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAATTTGGAGTGGTTCAACGGAGTAAAC 1957 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 ATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCA 2017 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 CATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGA 2077 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 AGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGT 2137 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 CTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAGAAGAAGGTTTTGTTCGT 2197 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 GTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATG 2257 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 TTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCTTCTACAGTATTTTCACGT 2317 consensus_12587#3 ------------------------------------------------------------ consensus_12587#1 ------------------------------------------------------------ consensus_12587#2 ------------------------------------------------------------ consensus_12587#0 TTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAGACTAGTTCTCT 2366 consensus_12587#3 ------------------------------------------------- consensus_12587#1 ------------------------------------------------- consensus_12587#2 ------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||