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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12587#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2366 fasta sequence
[TTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCGCGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTCCCGCTCACGCTCGCCTACTCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAAC-GGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACC-GTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCACCAGGATCCAC-GATTCCAACCTGATCTCTCCAGTACATATTCACCAGTAAAATGC-AATGTTGATTGTAC--TTGTGATAATGAGAGGAGTCAATGCACTTATGAGAGGCAGTATGCTGAAATGAGCTCCAGCAGTGGTGTGCTTGGCGAGGACATTATGTCATTTGGCAAAGAAAGTGAACTTAAGCCACGGCGTGCTGTTTTTGGCTGTGAAAACACCGAAACAGGAGATTTGTTCAGTCAACATGCTGATGGTATTATGGGGCTGGGCCGTGGTCAACTTAGCATAATGGATCAGCTTGTTGAGAAGGGTGTCATTAGTGATTCATTCTCTCTGTGCTATGGTGGAATGGATGTTGGTGGTGGTACTATGGTACTTGGTGGGATGCCTGCTCCTCCTGACATGGTTTTCTCTCATTCAAACCCTGTCCGCAGCCCGTATTACAACATTGAGTTAAAGGAAATACATGTTGCCGGAAAGGCATTGCGGTTAGACCCAAAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTTCGAGTTATGAATGTTACAAGCCAAGGAAACTCTACTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAGCAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCAGTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAATTTG-GAGTGGTTCAACGGAGTAAACATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCACATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGAAGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGTCTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAGAAGAAGGTTTTGTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCTTCTACAGTATTTTCACGTTTCA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAGACTAGTTCTCT]
[+] EMBL AK099740 [TTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCGCGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTCCCGCTCACGCTCGCCTACTCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAAC GGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACC GTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCACCAGGATCCAC GATTCCAACCTGATCTCTCCAGTACATATTCACCAGTAAAATGC AATGTTGATTGTAC TTGTGATAATGAGAGGAGTCAATGCACTTATGAGAGGCAGTATGCTGAAATGAGCTCCAGCAGTGGTGTGCTTGGCGAGGACATTATGTCATTTGGCAAAGAAAGTGAACTTAAGCCACGGCGTGCTGTTTTTGGCTGTGAAAACACCGAAACAGGAGATTTGTTCAGTCAACATGCTGATGGTATTATGGGGCTGGGCCGTGGTCAACTTAGCATAATGGATCAGCTTGTTGAGAAGGGTGTCATTAGTGATTCATTCTCTCTGTGCTATGGTGGAATGGATGTTGGTGGTGGTACTATGGTACTTGGTGGGATGCCTGCTCCTCCTGACATGGTTTTCTCTCATTCAAACCCTGTCCGCAGCCCGTATTACAACATTGAGTTAAAGGAAATACATGTTGCCGGAAAGGCATTGCGGTTAGACCCAAAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTTCGAGTTATGAATGTTACAAGCCAAGGAAACTCTACTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAGCAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCAGTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAATTTG GAGTGGTTCAACGGAGTAAACATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCACATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGAAGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGTCTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAGAAGAAGGTTTTGTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATA ]
[-] EMBL BI811127 [ aGCGGCTGCCGCTGGTGCTCCCGCTCA GCTCGCCTAC CCAACGCCA CCGCCTCCCCGCCTCCTCGGCCAGGCGCGG CTCGGTGATGGACACAA CCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAACTGGGTATTACACGA GAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACCTGTCACCTACGTTCCCTGTGCCA CTGCGAGCAGTGCGG AAACACCAGGATCCACAGATTCCAACTGGATCTCTCCAGTACATATTCACCAGTAAAATGCAAATGTTGATTGTACCTTTGTGATAATGA ]
[+] EMBL CF326551 [ TTTTCTCTCATTCAAACCCTGTCCGCAGCCCGTATTACAACATTGAGTTAAAGGAAATACATGTTGCCGGAAAGGCATTGCGGTTAGACCCAAAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGC ]
[+] EMBL AK061647 [ AACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCCGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTAATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTTCGAGTTATGAATGTTACAAGCCAAGGAAACTCTACTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAGCAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCAGTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAATTTG GAGTGGTTCAACGGAGTAAACATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCACATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGAAGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGTCTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAGAAGAAGGTTTTGTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGAT ]
[-] EMBL CF324947 [ TACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAATTTGNGAGTGGTTCAACGGAGTAAACATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCACATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGAAGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGTCTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAGAAGAAGGTTTTGTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCc ]
[-] EMBL CF323821 [ TTCAACGGAGTAAACATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCACATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGAAGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGTCTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAAAAAAAGGTTTTGTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCTTCTACAGTGTTTTCACGTTTCATTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAGACTAGTTCTCT]
[+] EMBL CF314212 [ GTTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCTTCTACAGTATTTTCACGTTTCA AAAAAAAAAAAAAAAAAAAAA ]
[-] EMBL CF314211 [ TTCGTGTAATGTAGATTAAGTAGAATAGAGCAAGGCCCAAAAGCCCAGCAGCCATGGACGGAATGTTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCTTTTACAGTATTTTCACGTTTCA AAAAAAAAAAAAAAAAAAAAAA ]
consensusID : consensus_12587#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 794 fasta sequence
[TCCTTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCGCGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTCCCGCTCACGCTCGCCTACCCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAACGGGTCGGTACAGTTCGTTTTTTGCCCTCCGCTCTCTCTCTCTCGATAATTTCCCCCAAATTTTTTTTTCTTGGGGGGGTTGCGTGGTTGGATCTGAGGCTGGATGTCGCCGCGTGTTGTTCGTGCTGGTTTAGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACCGTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCACCAGGTCGGCCTGGATTCGTCAAATTCTCTGCTTACCTGTTTGAATTGTGTGTGACGATCGGTTTAATTAGGATTGGTGATGGTCGCGTGTATGGATATTGGATTCCCATATGTCAAACTGTCGCTTGACCATTCAGGTTGGACAATTGACTCCAGTGCAAATGATACATTTTTGTCGGGCTTGGGTGTGTGCATAGACATTTATTGTTCCAAAATTCAAAGTCTTGGAAAATACACGTTT]
[+] EMBL AK110717 [TCCTTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCGCGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTCCCGCTCACGCTCGCCTACCCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAACGGGTCGGTACAGTTCGTTTTTTGCCCTCCGCTCTCTCTCTCTCGATAATTTCCCCCAAATTTTTTTTTCTTGGGGGGGTTGCGTGGTTGGATCTGAGGCTGGATGTCGCCGCGTGTTGTTCGTGCTGGTTTAGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACCGTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCACCAGGTCGGCCTGGATTCGTCAAATTCTCTGCTTACCTGTTTGAATTGTGTGTGACGATCGGTTTAATTAGGATTGGTGATGGTCGCGTGTATGGATATTGGATTCCCATATGTCAAACTGTCGCTTGACCATTCAGGTTGGACAATTGACTCCAGTGCAAATGATACATTTTTGTCGGGCTTGGGTGTGTGCATAGACATTTATTGTTCCAAAATTCAAAGTCTTGGAAAATACACGTTT]
consensusID : consensus_12587#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 400 fasta sequence
[TCACTCTACACTAGCCTGTTTAGAGATATACCATTATAAACTATAAAGTTCTCTCTCCCAAACACTATTCTTATACTGATCAGTGGCTTTAGCGTGTAGTTGTAGTATGCAATGGGGCTTCCTGGCAAACATGGAAAACCTGAATATCTGTCAAAGTGCTTAAGCAAGATTCTCACATCTATTANNTTTTNTCATTTTCACCAATTCCCTTGAATATTTCTTGTGCGGGGGNGATGCATCANCCCCCCCCATTTTCATCTGCTGGAGAACTTACATTCGGTAATTATTTCTACAGGNNANNAAAAAAANATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATT]
[+] EMBL CA766400 [TCACTCTACACTAGCCTGTTTAGAGATATACCATTATAAACTATAAAGTTCTCTCTCCCAAACACTATTCTTATACTGATCAGTGGCTTTAGCGTGTAGTTGTAGTATGCAATGGGGCTTCCTGGCAAACATGGAAAACCTGAATATCTGTCAAAGTGCTTAAGCAAGATTCTCACATCTATTANNTTTTNTCATTTTCACCAATTCCCTTGAATATTTCTTGTGCGGGGGNGATGCATCANCCCCCCCCATTTTCATCTGCTGGAGAACTTACATTCGGTAATTATTTCTACAGGNNANNAAAAAAANATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATT]
consensusID : consensus_12587#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 316 fasta sequence
[CCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTAAGGGTGACCCATAGTCTGTGCTGTTGTGGTTTTTCTAGTTT]
[+] EMBL OSC111331 [CCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTAAGGGTGACCCATAGTCTGTGCTGTTGTGGTTTTTCTAGTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12587#0 TTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCGCGTCGG 60
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 CTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCC 120
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTC 180
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 CCGCTCACGCTCGCCTACTCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGC 240
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 CTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAAC 300
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTG 360
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GACTCCGGGAGCACCGTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCAC 420
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 CAGGATCCACGATTCCAACCTGATCTCTCCAGTACATATTCACCAGTAAAATGCAATGTT 480
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GATTGTACTTGTGATAATGAGAGGAGTCAATGCACTTATGAGAGGCAGTATGCTGAAATG 540
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 AGCTCCAGCAGTGGTGTGCTTGGCGAGGACATTATGTCATTTGGCAAAGAAAGTGAACTT 600
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 AAGCCACGGCGTGCTGTTTTTGGCTGTGAAAACACCGAAACAGGAGATTTGTTCAGTCAA 660
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 CATGCTGATGGTATTATGGGGCTGGGCCGTGGTCAACTTAGCATAATGGATCAGCTTGTT 720
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GAGAAGGGTGTCATTAGTGATTCATTCTCTCTGTGCTATGGTGGAATGGATGTTGGTGGT 780
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GGTACTATGGTACTTGGTGGGATGCCTGCTCCTCCTGACATGGTTTTCTCTCATTCAAAC 840
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 CCTGTCCGCAGCCCGTATTACAACATTGAGTTAAAGGAAATACATGTTGCCGGAAAGGCA 900
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ---TCCTTCCTCCTCCTCGGCTCGGCGCGACGAGTCCTCGCCATGGCGAGTCGCCGGTCG 57
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 TTGCGGTTAGACCCAAAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACC 960
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 CGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCT 117
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 ACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAA 1020
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 TCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTG 177
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCA 1080
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 GTGCTCCCGCTCACGCTCGCCTACCCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGG 237
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTT 1140
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 CGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTC 297
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTT 1200
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ACCAACGGGTCGGTACAGTTCGTTTTTTGCCCTCCGCTCTCTCTCTCTCGATAATTTCCC 357
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGG 1260
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 CCAAATTTTTTTTTCTTGGGGGGGTTGCGTGGTTGGATCTGAGGCTGGATGTCGCCGCGT 417
consensus_12587#2 ---------TCACTCTACACTAGCCTGTTTAGAGATATACCATTATAAACTATAAAGTTC 51
consensus_12587#0 GGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTT 1320
consensus_12587#3 ----------------------------CCTATGACCGTCACAATGAGAAGATTGGCTTT 32
consensus_12587#1 GTTGTTCGTGCTGGTTTAGGTATTACACGACGAGGCTGT-ACATCGGGACGCCT--TCGC 474
consensus_12587#2 TCTCTCCCAAACACTATTCTTATACTGATCAGTGGCTTT---AGCGTGTAGTTG--TAGT 106
* * * * * * *
consensus_12587#0 TGGAAAACTAACTGTTCA-GAGTTGTGGGAGAGGCTCCATATTAGTGAAGT---TCCTTC 1376
consensus_12587#3 TGGAAAACTAACTGTTCA-GAGTTGTGGGAGAGGCTCCATATTAGTGAAGT---TCCTTC 88
consensus_12587#1 AGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACCGTCACCTACGTTCCCTGCGCCACCT 534
consensus_12587#2 ATGCAATGGGGCTTCCTGGCAAACATGG-AAAACCTGAATATCTGTCAAAG---TGCTTA 162
* ** ** * * * * **
consensus_12587#0 ATCAGCACCTTCAGATTCAG-AGGGAGATATGG---CACCAGCTCCTGCTCCTAGTGGTT 1432
consensus_12587#3 ATCAGCACCTTCAGATTCAG-AGGGAGATATGG---CACCAGCTCCTGCTCCTAGTGGTT 144
consensus_12587#1 GCGAGCAGTGCGGCAACCACCAGGTCGGCCTGGATTCGTCAAATTCTCTGCTTACCTGTT 594
consensus_12587#2 AGCAAGATTCTCACATCTATTANNTTTTNTCATTTTCACCAATTCCCTTGAATATTTCTT 222
* * * * * * ** * * ** **
consensus_12587#0 TGC-CTGAATTTGATG--TTGGCCTAATCACTGTTGATA-------TGTCCATAAATGTT 1482
consensus_12587#3 TGC-CTGAATTTGATG--TTGGCCTAATCACTGTTGATA-------TGTCCATAAATGTT 194
consensus_12587#1 TGAATTGTGTGTGACGA-TCGGTTTAATTAGGATTGGTGATGGTCGCGTGTATGGATATT 653
consensus_12587#2 GTG--CGGGGGNGATGCATCANCCCCCCCCATTTTCAT--------CTGCTGGAGAACTT 272
* ** * * ** * * **
consensus_12587#0 ACTTATCCAAACCTGAAACC-TCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCT 1541
consensus_12587#3 ACTTATCCAAACCTGAAACC-TCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCT 253
consensus_12587#1 GGATTCCCATATGTCAAACTGTCGCTTGACCATTCAGGTTGGACAATTGACTCCAGTGCA 713
consensus_12587#2 ACATTCGGTAATT----ATTTCTACAGGNNANNAAAAAAANATCATGTAGTCTCTATACT 328
* * * * * * *
consensus_12587#0 GGACATTGACTCCCGTCAG--GTTCGAGTT-ATGAATGTTA-CAAGCCAAGGAAACTCTA 1597
consensus_12587#3 GGACATTGACTCCCGTCAG--GTAAGGGTG-ACCCATAGTC-TGTGCTGTTGTGGTTTT- 308
consensus_12587#1 AATGATACATTTTTGTCGG--GCTTGGGTGTGTGCATAGACATTTATTGTTCCAAAATT- 770
consensus_12587#2 G--CTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGT- 385
* * * * * * * ** *
consensus_12587#0 CTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAG 1657
consensus_12587#3 -TCTAGTTT--------------------------------------------------- 316
consensus_12587#1 -CAAAGTCTTGGAAAATACACGTTT----------------------------------- 794
consensus_12587#2 --CTGGAGAAAGAAATT------------------------------------------- 400
consensus_12587#0 CAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCA 1717
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATC 1777
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 ATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTT 1837
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 TAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATT 1897
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 CAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAATTTGGAGTGGTTCAACGGAGTAAAC 1957
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 ATATAGGCGATTCTTTGGTAGAAATACCGTTGTGCGGGCTGCCATGTTGCAGCGGGTTCA 2017
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 CATCCGCTGCTGGGAGTTGCCCTTTTTCTTTGTATGTAACACAAGCTACAAGCTTACAGA 2077
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 AGAAGCACAAGATTACATAACTTCTCGATTCAGCACTTAGAGCCTCTGTTCATAAACTGT 2137
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 CTAGCGATTCAGATCAAGAGCTTCCTCTTGTAGCTTACAGTAGAAGAAGGTTTTGTTCGT 2197
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 GTAATGTAGATTAAGTAGAATAGAGCAAGGCACAAAAGCACAGCAGCCATGGACGGAATG 2257
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 TTGTATTATCTAGTATCTGATAAGTGCTGAGGATATTCGGCTTCTACAGTATTTTCACGT 2317
consensus_12587#3 ------------------------------------------------------------
consensus_12587#1 ------------------------------------------------------------
consensus_12587#2 ------------------------------------------------------------
consensus_12587#0 TTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAGACTAGTTCTCT 2366
consensus_12587#3 -------------------------------------------------
consensus_12587#1 -------------------------------------------------
consensus_12587#2 -------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||