These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12606#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1407 fasta sequence [CGGGATAAACTGGATAAGATCTCTGCCTTATCTCCTTCCCTTCCCCTCCACAAACTCACTCACTCTCTCTCTCTGGATAAGGCCGAGAAGGCTGAGAAGAAGCCAGCCAGAAGGAAGGGATCGTCGTCGTCGTCTTCGGCGGCCGAGGAGGACGACGACGGCACGGCGTCGGTG-AGGTCAGGGGGCGTCGGGGGTGATCTCGCCGCACTTCCTCGACGCCGTCCTCCGCCCGCTGCGGCGCCGCCTCCGCGCGCACGCTCCCCGTCACTGCCGGCGCCGGGGCTGCTGCCCTCCTCCCTCGCGCTCCTCGCCAAGGTCTCCATC-GCCTGCTTCTCATGAGCCACTTGTGCCGCCGTCCTTGCCCGCTGCTCCTGCCGCCTCCTTGCCGGTGAGCGCAGGTGGATCCTCCGCTGCCACTGTAGAAGCAGAAGAAGCCGGCGGTCCCGGTGCCTCGGCTGCCGCAACGCCGGCGACAACCTGCTCTAGAACCTCTACCTCCTCTTCTTTGCCATCAACTTGAAGATGAAGTTGCTGCAGCGCGTGTTCTTGGAGATGGTCACCGTTGACTTCCGGCCGGACCTCACCACCTTCAGCGTCTGCGCCACAGCCTTCTCCATCAGGCATCAGTCGTCGTGATACCTCAGTATTAGGCCTGGTATCCACAAGTATCAGGCCTGGTACAAGATTACTTAGTGTCAAGCGCTCTTCGTCGATGTCGACGCTATCCTCCTCTCATCAGTGTTATGTGCAGGTACG----GACTGATACCTAGGTATCAAGCTTGGTACCAAGTACTAGGGGTATGGTACCTCAAGGGTATCATGCCTGGTACCTAAGTACCATCCAGTATCCATGGGTACCATGTGCATGGTATTAGGTACCAGATACCTATAATTATCAGGTACCACATGGTACCTGATACCTATTGTACCTGATACCTCGAGGGTATCATGCATGGTACCTAGGTACCATCCATGGGTATCTGTTAACAGTGAAATTTGGTAAGCCCAGAGTAGTC-ATCGGCTTAGAGTCAGCATCGGCTTCGAAGTCCTGAGATTAGCCGATGAGAGTTGTCAAGTCGTCAGTTGTCGGATTCTTGCTATATTCGGTTAAGGAAATTGATCTACTAAAGGAAGCTTATCCAAAAGAGACCGAGTTCAAAGAGAATGCGGCATGGCAAGTTATCTATTAATTAGGAATAGTTTGTTAGTTTCCTTTTATCTTTAGGAAAGTGTGTTTAGTGTCCTATAAGGACTTTATCTTTTCCTTTTATCTTTAGGAAAGTTTCTTTCTTGTCCGACAAGGACTTGTATCAACCCATGGGTATAAATATGTACACCTGGGGTCTATGTAATCTATCTTCACGATCAATACAATTCGGCGCATCGCCACCCTTTTTACTTCTAAAAA] [+] EMBL AK064111 [CGGGATAAACTGGATAAGATCTCTGCCTTATCTCCTTCCCTTCCCCTCCACAAACTCACTCACTCTCTCTCTCTGGATAAGGCCGAGAAGGCTGAGAAGAAGCCAGCCAGAAGGAAGGGATCGTCGTCGTCGTCTTCGGCGGCCGAGGAGGACGACGACGGCACGGCGTCGGTG AGGTCAGGGGGCGTCGGGGGTGATCTCGCCGCACTTCCTCGACGCCGTCCTCCGCCCGCTGCGGCGCCGCCTCCGCGCGCACGCTCCCCGTCACTGCCGGCGCCGGGGCTGCTGCCCTCCTCCCTCGCGCTCCTCGCCAAGGTCTCCATC GCCTGCTTCTCATGAGCCACTTGTGCCGCCGTCCTTGCCCGCTGCTCCTGCCGCCTCCTTGCCGGTGAGCGCAGGTGGATCCTCCGCTGCCACTGTAGAAGCAGAAGAAGCCGGCGGTCCCGGTGCCTCGGCTGCCGCAACGCCGGCGACAACCTGCTCTAGAACCTCTACCTCCTCTTCTTTGCCATCAACTTGAAGATGAAGTTGCTGCAGCGCGTGTTCTTGGAGATGGTCACCGTTGACTTCCGGCCGGACCTCACCACCTTCAGCGTCTGCGCCACAGCCTTCTCCATCAGGCATCAGTCGTCGTGATACCTCAGTATTAGGCCTGGTATCCACAAGTATCAGGCCTGGTACAAGATTACTTAGTGTCAAGCGCTCTTCGTCGATGTCGACGCTATCCTCCTCTCATCAGTGTTATGTGCAGGTACG GACTGATACCTAGGTATCAAGCTTGGTACCAAGTACTAGGGGTATGGTACCTCAAGGGTATCATGCCTGGTACCTAAGTACCATCCAGTATCCATGGGTACCATGTGCATGGTATTAGGTACCAGATACCTATAATTATCAGGTACCACATGGTACCTGATACCTATTGTACCTGATACCTCGAGGGTATCATGCATGGTACCTAGGTACCATCCATGGGTATCTGTTAACAGTGAAATTTGGTAAGCCCAGAGTAGTC ATCGGCTTAGAGTCAGCATCGGCTTCGAAGTCCTGAGATTAGCCGATGAGAGTTGTCAAGTCGTCAGTTGTCGGATTCTTGCTATATTCGGTTAAGGAAATTGATCTACTAAAGGAAGCTTATCCAAAAGAGACCGAGTTCAAAGAGAATGCGGCATGGCAAGTTATCTATTAATTAGGAATAGTTTGTTAGTTTCCTTTTATCTTTAGGAAAGTGTGTTTAGTGTCCTATAAGGACTTTATCTTTTCCTTTTATCTTTAGGAAAGTTTCTTTCTTGTCCGACAAGGACTTGTATCAACCCATGGGTATAAATATGTACACCTGGGGTCTATGTAATCTATCTTCACGATCAATACAATTCGGCGCATCGC ] [+] EMBL C26651 [ GCCGAGAAGGCTGAGAAGAAGCCAGCCAGAAGGAAGGGATCGTCGTCGTNGTCTTCGGCGGCCGAGGAGGACGACGACGNCACGGCGNGGTTGTAGGTCAGGGGGCGTCGGGGGTGATCTCGCCGNACTTCCTCGACGNCGTNCTCCGNNCGCTGCGGCGCCGCCTCCGCGCGCACGNTCCCCGTCACTGCCGGCGCCGGGGCTGCTTGCCTCCTCCCTCGCGCTCCTCGGCAAGGTCTCCATCNGCCTGNTTCTCATGAGCCACTTt ] [-] EMBL CB965213 [ CCACCTTTAGCTTCTTCGCCACATCCTTCTCCATCAGGCATCAGTCGTCTTGATACCTCAGTATTAGGCCTGGTATCCACAAGTATCAGGCCTGGTACAAGATTACTCAGTGTCAAGCGCTCTTCGTCGATGTCGACGCTATCCTCCTCTCATCAGTGTTATGTGCAGGTACGTTATGACTGATACCTAGGTATCAAGCTTGGTACCAAGTACTAGGGGTATGGTACCTCGAGGGTATCATGCCTGGTACCTAAGTA CCAGTATCCATGGGTACCATGTGCATGGTATCAGGTACCAGATACCTATAATTATCAAGTACCACATGGTACCTGATACCTATTATACCTGATACCTCGAGGGTATCATGCATGGTACCTAGGTACCATCCATGGGTATCTGTTAACAGTGAAATTTGGTAAGCCCAGAGTAGTC ATTGGCTTAGAGTCAGCATCGGCTTCAAAGTCCTGAGATTAGCCGATGAGAGTTGTCAAGTCATCAGTTGTCGGATTCTTGCTATATTCGGTTAAGGAAATTGATCTATTAAAGGAAG ] [+] EMBL BQ906916 [ CCCAGAGTAGTCTATCGGCTTAGAGTCAGCATCGGTTTCGAAGTCCTGAGATTAGCCGATGAAAGTTATCAAGTCGTCAGTTGTCGGATTCTTGCTATATTCGGTTAAGGAAATTGATCTACTAAAGGAAGCTTATCCAGAAGAGACCGAGTTCAAAGAGAATGCGGCATGGCAAGTTATCTATTAATTAGGAATAGTTTGTTAGTTTCCTTTTATCTTTAGGAAAGTGTGTTTAGTGTCCTATAAGGACTTTATCTTTTCCTTTTATCTTTAGGAAAGTTTCTTTCTTGTCCGACAAGGACTTGTATCAACCCATGGGTATAAATATGTACACCCGGGGTCTATGTAATCTATCTTCACGATCAATACAATTCGGCGCATCGCCACCCTTTTTACTTCTAAAAA] consensusID : consensus_12606#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1137 fasta sequence [CACCCGTCCATCCCAATCTCGCTTCCACCGACCAAGCGAGTCGCCACCGGCTCGTTCCTCAGCCTCCGCTTCCGTCTTCTCTACTCCTCCTCCCATCCTCCATCCTGAGCGTGTCCTCTCCATCAAGCTCTACGGCGTCGTCGTTGGTCTCCGTGGCGGCGTCGAGCCCGCTGGTGTCGCCGAATGCGAAGCCCCGCGTGCAGCCGAAGCTCCCGCCGAAGACGAAGCTGACCACCATCACCTTTAGCCCCCACCACAAGCGTGACTACCAGGTCACCTGCACCAACACCGGCTGCCGCCCCTGCGTCGTCTCCTGCCCTTCCAACTGCCCCAACATGTGCCTCGTCGCTTGCGCCTACTGCCTCACCTTCTGCCCGCCTCGCGCTAGCCGCCCACGGTGCCTGTTGTCTGCACCGATGCCGGGAACACCGCAACGACGACGGTGAAGACGAGGAGAACACAGGCGACGGTGGCCATGGCAACTATGGATCTAGCACGGGGTGGCCAGCAAGGCGGAAGTTGGCGATGGGTGAACGGCAGCAAGCAAGATAAAGGCCAGAGACAACCCAATATTGAGGTCCCCCAGTAGCAGCAAGCCTAGGTAAATCGATCTTGGATGGATTGGAGTTCCCCGTTGATCCCTCTGGTGATTTTATTTTGGTGGATTAGAGTTCGATTCCGGAGTTCTTCCGTGCATCGCTCTGTTTGATTTTATTAGGATAGATTAGAGTGTAATTCTATCTACTTTATCTTTGCGAGTTTGGAAATTTGGAATCTATTTTATCTGGAATCTGGAACCATCGCTAGCTGCTGGTGTTAACGCCAAAAATTTGGTAAACCCGAAGTCATCATCATCGACCTTCAGAGGCTTGGAATCGACCGATGGGAGTTATAAAATCGCCAGCAGTTGTGTTCTTGGTGGAGTTGGATCAATTAAAGGAAATTTATTTAGATGAGTCCGAATTCAAAAGACGATGCAGCTTTGTCTGTTTTCTTTTATCTTTAGGAATGTATGTTTAGTATCCGATAAGCATTTTATGTTTTTCTTTTATCCTTAGTAAAGTCTTTTTCTTGTTCTACAAGGACTAGTATCTCCCCATTAGTATAAATATATACACCCGGGGTCATTATAAAATA] [+] EMBL AK061137 [CACCCGTCCATCCCAATCTCGCTTCCACCGACCAAGCGAGTCGCCACCGGCTCGTTCCTCAGCCTCCGCTTCCGTCTTCTCTACTCCTCCTCCCATCCTCCATCCTGAGCGTGTCCTCTCCATCAAGCTCTACGGCGTCGTCGTTGGTCTCCGTGGCGGCGTCGAGCCCGCTGGTGTCGCCGAATGCGAAGCCCCGCGTGCAGCCGAAGCTCCCGCCGAAGACGAAGCTGACCACCATCACCTTTAGCCCCCACCACAAGCGTGACTACCAGGTCACCTGCACCAACACCGGCTGCCGCCCCTGCGTTGTCTCCTGCCCTTCCAACTGCCCCAACATGTGCCTCGTCGCTTGCGCCTACTGCCTCACCTTCTGCCCGCCTCGCGCTAGCCGCCCACGGTGCCTGTTGTCTGCACCGATGCCGGGAACACCGCAACGACGACGGTGAAGACGAGGAGAACACAGGCGACGGTGGCCATGGCAACTATGGATCTAGCACGGGGTGGCCAGCAAGGCGGAAGTTGGCGATGGGTGAACGGCAGCAAGCAAGATAAAGGCCAGAGACAACCCAATATTGAGGTCCCCCAGTAGCAGCAAGCCTAGGTAAATCGATCTTGGATGGATTGGAGTTCCCCGTTGATCCCTCTGGTGATTTTATTTTGGTGGATTAGAGTTCGATTCCGGAGTTCTTCCGTGCATCGCTCTGTTTGATTTTATTAGGATAGATTAGAGTGTAATTCTATCTACTTTATCTTTGCGAGTTTGGAAATTTGGAATCTATTTTATCTGGAATCTGGAACCATCGCTAGCTGCTGGTGTTAACGCCAAAAATTTGGTAAACCCGAAGTCATCATCATCGACCTTCAGAGGCTTGGAATCGACCGATGGGAGTTATAAAATCGCCAGCAGTTGTGTTCTTGGTGGAGTTGGATCAATTAAAGGAAATTTATTTAGATGAGTCCGAATTCAAAAGACGATGCAGCTTTGTCTGTTTTCTTTTATCTTTAGGAATGTATGTTTAGTATCCGATAAGCATTTTATGTTTTTCTTTTATCCTTAGTAAAGTCTTTTTCTTGTTCTACAAGGACTAGTATCTCCCCATTAGTATAAATATATACACCCGGGGTCATTATAAAATA] [+] EMBL CF319401 [ CGGCTCGTTCCTCAGCCTCCGCTTCCGTCTTCTCTACTCCTCCTCCCATCCTCCATCCTGAGCGTGTCCTCTCCATCAAGCTCTACGGCGTCGTCGTTGGTCTCCGTGGCGGCGTCGAGCCCGCTGGTGTCGCCGAATGCGAAGCCCCGCGTGCAGCCGAAGCTCCCGCCGAAGACGAAGCTGACCACCATCACCTTTAGCCCCCACCACAAGCGTGACTACCAGGTCACCTGCACCAACACCGGCTGCCGCCCCTGCGTCGTCTCCTGCCCTTCCAACTGCCCCAACATGTGCCTCGTCGCTTGCGCCTACTGCCTCACCTTCTGCCCGCCTCGCGCTAGCCGCCCACGGTGCCTGTTGTCTGCACCGATGCCGGGAACACCGCAACGACGACGGTGAAGACGAGGAGAACACAGGCGACGGTGGCCATGGCAACTATGGATCTAtc ] [+] EMBL BF430542 [ TCCTCCATCCTGAGCGTGTCCTCTCCATCAAGCTCTACGCCGTCGTCGTTGGCCTCCGTGGCGGCGTCGAGCCCGCTGGTGTCGCCGAATGCGAAGCCCCGCGTGCAGCCGAAGCTCCCGCCGAAGACGAAGCTGACCACCATCACCTTTAGCCCCCACCACAAGCGTGACTACCAGGTCACCTGCACCAACACCGGCTGCCGCCCCTGCGTCGTCTCCTGCCCTTCCAACTGCCCCAACATGTGCCTCGTCGCTTGCGCCTACTGCCTCACCTTCTGCCCGCCTCGCGCTAGCCGCCCACGGTGCCTGTTGTCTGCACCGATGCCGGGAACACCGTAACGACGACGGTGAAGACGAGGAGAACACAGGCGACGGTGGCCATGGCAACTATGGATCTAGCACGGGGTGGCCAGCAAGGCAGAAGTTGGCGATGGGTGAACGGCAGCAAGCAAGATAAAGGCCAGAGACAACCCAATATTGAGGTCCCCCAGTAGCAGCAAGCCTAGGTAAATCGATCTTGGATGGATTGGAGTTCCCCG TGATCCCTCTGGTGATTTTATTTTGGTGGATTAGAGTTCGATTCCGGAGTTCTTCCGTGCATCGCTCTGTTTGATTTTATTAGGATAGATTAGAGTGTAATTCTATCTACTTTATCTTT ] [-] EMBL CF319402 [ CAACTATGGATCTAGCACGGGGTGGCCAGCAAGGCGGAAGTTGGCGATGGGTGAACGGCAGCAAGCAAGATAAAGGCCAGAGACAACCCAATATTGAGGTCCCCCAGTAGCAGCAAGCCTAGGTAAATCGATCTTGGATGGATTGGAGTTCCCCGTTGATCCCTCTGGTGATTTTATTTTGGTGGATTAGAGTTCGATTCCGGAGTTCTTCCGTGCATCGCTCTGTTTGATTTTATTAGGATAGATTAGAGTGTAATTCTATCTACTTTATCTTTGCGAGTTTGGAAATTTGGAATCTATTTTATCTGGAATCTGGAACCATCGCTAGCTGCTGGTGTTAACGCCAAAAATTTGGTAAACCCGAAGTCATCATCATCGACCTTCAGAGGCTTGGAATCGACCGATGGGAGTTATAAAATCGCCAGCAGTTGTGTTCTTGGTGGAGTTGGATCAATTAAAGGAAATTTATTTAGATGAGTCCGAATTCAAAAGACGATGCAGCCTTGTCTGTTTTCTTTTATCTTTAGGAATGTATGTTTAGTATCCGATAAGCATTTTATGTTTTTCTTTTATCCTTAGTAAAGTCTTTTTCTTGTTCTAAAAaaa ] consensusID : consensus_12606#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 790 fasta sequence [GAATCTATTTTATCTGGAATCTGGAACCATCGCTAGCTGCTGGTGTTAACGCCAAAAATTTGGTAAGCCCGAAGTCATCATCGACCTAGAGTCAGTATCGGCTTCAGAGTCTTGGAATCGATCGATGAGAGTTATAAAATCGCCAGCAGTTGTGTTCTTGGTGGAGTTGGATCAATTAAAGGAAATTTATTTAGAAGAGTCCGAATTCAAAGACGATGCAGCATGACAAGTGTTTCTATTAATTAGGAATAGTTTGTCTGTTTTCTTTTATCTTTAGGAAGGTGTGTTTAGTATCCGATAAGCACTTTATGTTTTCCTTTTATCCTTAGTAAAGTCTCTTTCTTGTCCTATAAGGACTAGTGTCTCCCCATGAGTATAAATATGTACACCCGGGGTCATTATAAAATATCTTTTGATCAATACAACTACTCTGGGCGCATCGCCACCCTCTTTTCTGAGGTTTTTACTAATCATCCCGTGGAATTTGGCACCTGACGTGGGGTTGCATCGGTTCAGTTTGATCTCCGGCGAATGGGTAAGTCCTACGTTCCGCCGGGGTTGGTGAATCTATCGTCTACATCGGCGTCGTTCAAGGCTGCATCGCTCCGATCTCTTGGATCGCTCTGGTTTGGTTAATATATTTGCCTACCTGATATCTCAATTCTATCTCTAATTGCATTGTGTTTAGAGACGCATCGGTTTAGTTGGAACTGTCTCGGTTAGGTCTGATCTTCTATCTTAGCCGATATATCTCTACAATCATAATGTTGTTCTGAATAGATTTGTTATA] [+] EMBL CB620324 [GAATCTATTTTATCTGGAATCTGGAACCATCGCTAGCTGCTGGTGTTAACGCCAAAAATTTGGTAAGCCCGAAGTCATCATCGACCTAGAGTCAGTATCGGCTTCAGAGTCTTGGAATCGATCGATGAGAGTTATAAAATCGCCAGCAGTTGTGTTCTTGGTGGAGTTGGATCAATTAAAGGAAATTTATTTAGAAGAGTCCGAATTCAAAGACGATGCAGCATGACAAGTGTTTCTATTAATTAGGAATAGTTTGTCTGTTTTCTTTTATCTTTAGGAAGGTGTGTTTAGTATCCGATAAGCACTTTATGTTTTCCTTTTATCCTTAGTAAAGTCTCTTTCTTGTCCTATAAGGACTAGTGTCTCCCCATGAGTATAAATATGTACACCCGGGGTCATTATAAAATATCTTTTGATCAATACAACTACTCTGGGCGCATCGCCACCCTCTTTTCTGAGGTTTTTACTAATCATCCCGTGGAATTTGGCACCTGACGTGGGGTTGCATCGGTTCAGTTTGATCTCCGGCGAATGGGTAAGTCCTACGTTCCGCCGGGGTTGGTGAATCTATCGTCTACATCGGCGTCGTTCAAGGCTGCATCGCTCCGATCTCTTGGATCGCTCTGGTTTGGTTAATATATTTGCCTACCTGATATCTCAATTCTATCTCTAATTGCATTGTGTTTAGAGACGCATCGGTTTAGTTGGAACTGTCTCGGTTAGGTCTGATCTTCTATCTTAGCCGATATATCTCTACAATCATAATGTTGTTCTGAATAGATTTGTTATA] consensusID : consensus_12606#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 557 fasta sequence [ATGCTATTGCTGCAAGAATTTGATAATGAGAATTTCACTGGAAATGACATCTGGTTTGAGTTCACTGAAGATGAAGAAAAAACAATTGAAAATCATGCAGCCATAAGCCCCCATCTCCTCTGCCGCAAGTCATCATCGGCCTAAAGTCAGTATCGGCTTCAGAGTCTTGGAATTGGAATCGACCGATGGGAGTTATCAAATCGCCAGCAGTTGTGTTCATGGTGGAGTCAGATCAATTAAAGGAAATTTATCCAAAAGATTGAGTTCAAGGAGAAGAGTTCGAGTTCAAGGAGTATGCGGCATGGCAAGTTATCTATTAATTAGGAATAGTTTGTTAGTTCTTTTTATCTTTAGGAAAGTGTTTAGTGTCTGATAAGAACTTAATGTTTTCTTTTTATCTTTAGGAAAGTTTCTCTTGTCCTTGTCCTACAAGGACAAGTATCTCCCCATGGGTATAAATATGTACACCCGGAGTCATTGTAAGGAATATTTCTCGATCAATACAACTACTCGGCGCATCGCCATCCTCTTTAAAAAAAAAAAAAAAAAAAAAAAAC] [-] EMBL CF325980 [ATGCTATTGCTGCAAGAATTTGATAATGAGAATTTCACTGGAAATGACATCTGGTTTGAGTTCACTGAAGATGAAGAAAAAACAATTGAAAATCATGCAGCCATAAGCCCCCATCTCCTCTGCCGCAAGTCATCATCGGCCTAAAGTCAGTATCGGCTTCAGAGTCTTGGAATTGGAATCGACCGATGGGAGTTATCAAATCGCCAGCAGTTGTGTTCATGGTGGAGTCAGATCAATTAAAGGAAATTTATCCAAAAGATTGAGTTCAAGGAGAAGAGTTCGAGTTCAAGGAGTATGCGGCATGGCAAGTTATCTATTAATTAGGAATAGTTTGTTAGTTCTTTTTATCTTTAGGAAAGTGTTTAGTGTCTGATAAGAACTTAATGTTTTCTTTTTATCTTTAGGAAAGTTTCTCTTGTCCTTGTCCTACAAGGACAAGTATCTCCCCATGGGTATAAATATGTACACCCGGAGTCATTGTAAGGAATATTTCTCGATCAATACAACTACTCGGCGCATCGCCATCCTCTTTAAAAAAAAAAAAAAAAAAAAAAAAC] [-] EMBL CF324647 [ GCCAGCAGTTGTGTTCATGGTGGAGTCAGATCAATTAAAGGAAATTTATCCAAAAGATTGAGTTCAAGGAGAAGAGTTCGAGTTCAAGGAGTATGCGGCATGGCAAGTTATCTATTAATTAGGAATAGTTTGTTAGTTCTTTTTATCTTTAGGAAAGTGTTTAGTGTCTGATAAGAACTTAATGTTTTCTTTTTATCTTTAGGAAAGTTTCTCTTGTCCTTGTCCTACAAGGACAAGTATCTCCCCATGGGTATAAATATGTACACCCGGAGTCATTGTAAGGAATATTTCTCGATCAATACAACTACTCGGCGCATCGCCATCCTCTTTAAAAAAAAAAAAAAAAAAAAAAAc ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12606#0 CGGGATAAACTGGATAAGATCTCTGCCTTATCTCCTTCCCTTCCCCTCCACAAACTCACT 60 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 ------------------------------------------------------------ consensus_12606#0 CACTCTCTCTCTCTGGATAAGGCCGAGAAGGCTGAGAAGAAGCCAGCCAGAAGGAAGGGA 120 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 ------------------------------------------------------------ consensus_12606#0 TCGTCGTCGTCGTCTTCGGCGGCCGAGGAGGACGACGACGGCACGGCGTCGGTGAGGTCA 180 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 ----------------------CACCCGTCCATCCCAATCTCGCTTCCACCGACCAAGCG 38 consensus_12606#0 GGGGGCGTCGGGGGTGATCTCGCCGCACTTCCTCGACGCCGTCCTCCGCCCGCTGCGGCG 240 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 AGTCGCCACCGGCTCGTTCCTCAGCCTCCGCTTCCGTCTTCTCTACTCCTCCTCCCATCC 98 consensus_12606#0 CCGCCTCCGCGCGCACGCTCCCCGTCACTGCCGGCGCCGGGGCTGCTGCCCTCCTCCCTC 300 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 TCCATCCTGAGCGTGTCCTCTCCATCAAGCTCTACGGCGTCGTCGTTGGTCTCCGTGGCG 158 consensus_12606#0 GCGCTC--CTCGCCAAGGTCTCCATCGCCTGCTTCTCATGAGCCACTTGTGCCGCCGTCC 358 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 GCGTCGAGCCCGCTGGTGTCGCCGAATGCGAAGCCCCGCGTGCAGCCGAAGCTCCCGCCG 218 consensus_12606#0 TTGCCCGCTGCTCCTGCCGCCTCCTT-GCCGGTGAGCGCAGGTGGATCCTCCGCTGCCAC 417 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 AAGACGAAGCTGACCACCATCACCTTTAGCCCCCACCACAAGCGTGACTACCAGGTCACC 278 consensus_12606#0 TGTAGAAGCAGAAGAAGCCGGCGGTCCCGGTGCCTCGGCTGCCGCAACGCCGGCGACAAC 477 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 TGCACCAACACCGGCTGCCGCC---CCTGCGTCGTCTCCTGCCCTTCCAACTGCCCCAAC 335 consensus_12606#0 CTGCTCTAGAACCTCTACCTCCTCTTCTTTGCCATCAACTTGAAGATGAAGTTGCTGCAG 537 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 ATGTGCCTCGTCGCTTGCGCCTACTGCCTCACCTTCTGCCCG----CCTCGCGCTAGCCG 391 consensus_12606#0 CGCGTGTTCTTGGAGATGGTCACCGTTGACTTCCGGCCGGACCTCACCACCTTCAGCGTC 597 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 CCCACGGTGCCTGTTGTCTGCACCGATG----CCGGGAACACCGCAACGACGACGGTGAA 447 consensus_12606#0 TGCGCCACAGCCTTCTCCATCAGGCATCAGTCGTCGTGATACCTCAGTATTAGGCCTGGT 657 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 GACGAGGAGAAC-------ACAGGCGACGGTGGCCATGGCAACTATGGATCTAGCACGG- 499 consensus_12606#0 ATCCACAAGTATCAGGCCTGGTACAAGATTACTTAGTGTCAAGCGCTCTTCGTCGATGTC 717 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 -------GGTGGCCAGCAAGGCGGAAGTTGGCGATGGGTGAACGGCAGCAAG-CAAGATA 551 consensus_12606#0 GACGCTATCCTCCTCTCATCAGTGTTATGTGCAGGTACGGACTGATACCTAGGTATCAAG 777 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 AAGGCCAGAGACAACCCAATATTGAGGTCCCCCAGTAGCAGCAAGCCTAGGTAAATCGAT 611 consensus_12606#0 CTTGG-TACCAAGTACTAGGGGTATGGTACCTCAAGGGTATCATGCCTGGTACCTAAGTA 836 consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 CTTGGATGGATTGGAGTTCCCCGTTGATCCCTCTGGTGATTTTATTTTGGTGGATTAG-- 669 consensus_12606#0 CCATCCAGTATCCATGGGTACCATGTGCATGGTATTAGGT-ACCAGATACCTATA-ATTA 894 consensus_12606#3 ----------------------------ATGCTATT-GCT-GCAAGAATTTGATA-ATGA 29 consensus_12606#2 ------------------------------------------------------------ consensus_12606#1 --AGTTCGATTCCGGAGTTCTTCCGTGCATCGCTCTGTTTGATTTTATTAGGATAGATTA 727 consensus_12606#0 TCAGGTACCACATGGTACCTGATACCTATTGTACCTGATACCTCGAGGGTATCATGCATG 954 consensus_12606#3 ----GAATTTCACTGGAAATGACATCTGGTTTG---AGTTCACTGAAGATGA-AGAAAAA 81 consensus_12606#2 --------------------------------------------GAATCTATTTTATCTG 16 consensus_12606#1 GAGTGTAATTCTATCTACTTTATCTTTGCGAGTTTGGAAATTTGGAATCTATTTTATCTG 787 ** * consensus_12606#0 GTACCTAGGTACCATCCATGG--GTATCTGTTAACAGTGAAA-TTTGGTAAGCCCAGAGT 1011 consensus_12606#3 ACAATTGAAAATCAT--------GCAGCCATAAGC--CCCCA-TCTCCTCTGCCGCAAGT 130 consensus_12606#2 GAATCTGGA-ACCATCGCTAGCTGCTGGTGTTAACGCCAAAAATTTGGTAAGCCCGAAGT 75 consensus_12606#1 GAATCTGGA-ACCATCGCTAGCTGCTGGTGTTAACGCCAAAAATTTGGTAAACCCGAAGT 846 * * * *** * * * * * * * * ** *** consensus_12606#0 AGTCATCGGCTTAGAGTCAGCATCGGCTTCGAAGTCCTGAGATTAG------CCGATGAG 1065 consensus_12606#3 CATCATCGGCCTAAAGTCAGTATCGGCTTCAGAGTCTTGGAATTGGAATCGACCGATGGG 190 consensus_12606#2 CATCATCGACCTAGAGTCAGTATCGGCTTCAGAGTCTTGGAATCGA------TCGATGAG 129 consensus_12606#1 CATCATCA--------TCGAC-----CTTCAGAGGCTTGGAATCGA------CCGATGGG 887 ***** ** **** ** * ** ** ***** * consensus_12606#0 AGTTGTCAAGTCGTCAGTTGTCGGATTCTTGCTATATTCGGTT------AAGGAAATTGA 1119 consensus_12606#3 AGTTATCAAATCGCCAGCAGTTGTGTTCATGGTGGAGTCAGATCAATTAAAGGAAATTTA 250 consensus_12606#2 AGTTATAAAATCGCCAGCAGTTGTGTTCTTGGTGGAGTTGG------------------A 171 consensus_12606#1 AGTTATAAAATCGCCAGCAGTTGTGTTCTTGGTGGAGTTGG------------------A 929 **** * ** *** *** ** * *** ** * * * * * consensus_12606#0 TCTACTAAAGGAAGCTTATCCAAAAGAGACCGAGTTCAAA-GAGAATGCGGCATGGCAAG 1178 consensus_12606#3 TCCAAAAGATTGAGTTCAAGGAGAAGAGTTCGAGTTCAAG-GAGTATGCGGCATGGCAAG 309 consensus_12606#2 TCAATTAAAGGAAATTTATTTAGAAGAGTCCGAATTCAAA-GACGATGCAGCATGACAAG 230 consensus_12606#1 TCAATTAAAGGAAATTTATTTAGATGAGTCCGAATTCAAAAGACGATGCAGC-------- 981 ** * * * * * * * * *** *** ***** ** **** ** consensus_12606#0 T-TATCTATTAATTAGGAATAGTTTGTTAGTTTCCTTTTATCTTTAGGAAAGTGTGTTTA 1237 consensus_12606#3 T-TATCTATTAATTAGGAATAGTTTGTTAGTT-CTTTTTATCTTTAGGAAAGTG--TTTA 365 consensus_12606#2 TGTTTCTATTAATTAGGAATAGTTTGTCTGTTTTCTTTTATCTTTAGGAAGGTGTGTTTA 290 consensus_12606#1 ----------------------TTTGTCTGTTTTCTTTTATCTTTAGGAATGTATGTTTA 1019 ***** *** *************** ** **** consensus_12606#0 GTGTCCTATAAGGACTTTATCTTTTCCTTTTATCTTTAGGAAAGTTTCTTT----CTTGT 1293 consensus_12606#3 GTGTCTGATAAGAACTTAATGTTTTCTTTTTATCTTTAGGAAAGTTTCTCTTGTCCTTGT 425 consensus_12606#2 GTATCCGATAAGCACTTTATGTTTTCCTTTTATCCTTAGTAAAGTCTCTTT----CTTGT 346 consensus_12606#1 GTATCCGATAAGCATTTTATGTTTTTCTTTTATCCTTAGTAAAGTCTTTTT----CTTGT 1075 ** ** ***** * ** ** **** ******* **** ***** * * * ***** consensus_12606#0 CCGACAAGGACTTGTATCAACCCATGGGTATAAATATGTACACCTGGGGTCTATGTAATC 1353 consensus_12606#3 CCTACAAGGACAAGTATCTCCCCATGGGTATAAATATGTACACCCGGAGTCATTGTAAGG 485 consensus_12606#2 CCTATAAGGACTAGTGTCTCCCCATGAGTATAAATATGTACACCCGGGGTCATTATAAAA 406 consensus_12606#1 TCTACAAGGACTAGTATCTCCCCATTAGTATAAATATATACACCCGGGGTCATTATAAAA 1135 * * ****** ** ** ***** ********** ****** ** *** * *** consensus_12606#0 TAT-CTTCACGATCAATACAATT---C--GGCGCATCGCCACCCTTTTT------ACTTC 1401 consensus_12606#3 AATATTTCTCGATCAATACAACTACTC--GGCGCATCGCCATCCTCTTT------AAAAA 537 consensus_12606#2 TAT--CTTTTGATCAATACAACTACTCTGGGCGCATCGCCACCCTCTTTTCTGAGGTTTT 464 consensus_12606#1 TA---------------------------------------------------------- 1137 * consensus_12606#0 TAAAAA------------------------------------------------------ 1407 consensus_12606#3 AAAAAAAAAAAAAAAAAAAC---------------------------------------- 557 consensus_12606#2 TACTAATCATCCCGTGGAATTTGGCACCTGACGTGGGGTTGCATCGGTTCAGTTTGATCT 524 consensus_12606#1 ------------------------------------------------------------ consensus_12606#0 ------------------------------------------------------------ consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 CCGGCGAATGGGTAAGTCCTACGTTCCGCCGGGGTTGGTGAATCTATCGTCTACATCGGC 584 consensus_12606#1 ------------------------------------------------------------ consensus_12606#0 ------------------------------------------------------------ consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 GTCGTTCAAGGCTGCATCGCTCCGATCTCTTGGATCGCTCTGGTTTGGTTAATATATTTG 644 consensus_12606#1 ------------------------------------------------------------ consensus_12606#0 ------------------------------------------------------------ consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 CCTACCTGATATCTCAATTCTATCTCTAATTGCATTGTGTTTAGAGACGCATCGGTTTAG 704 consensus_12606#1 ------------------------------------------------------------ consensus_12606#0 ------------------------------------------------------------ consensus_12606#3 ------------------------------------------------------------ consensus_12606#2 TTGGAACTGTCTCGGTTAGGTCTGATCTTCTATCTTAGCCGATATATCTCTACAATCATA 764 consensus_12606#1 ------------------------------------------------------------ consensus_12606#0 -------------------------- consensus_12606#3 -------------------------- consensus_12606#2 ATGTTGTTCTGAATAGATTTGTTATA 790 consensus_12606#1 -------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||