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Oryza sativa
cluster # 12608 cluster # 12608       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12608#0 length = 1033 sequences # 6  
consensus_12608#1 length = 969 sequences # 5  

consensusID : consensus_12608#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1033
fasta sequence
                              [GCTCTTCGCGTGCTCAACCGCTAATTCCCTCCCCTCTCCTCTCTCCCTCCGATCATTCGCGGCGGCGGCGGCGGCGACCGGCGACCGGCGGCCATGCGGGTGGCACCCAAGGTCCTCGTCCTCGTCCGCGACGCCGCCGGCTACGGCGCCGCCCTCGCCGACGCGCTCCGCCCAACGCCGGGGCTCACGAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTACAGATGTGGACCTTGAGGTGCTGCAGTGTGTAGGTGATCACTTGGCTAAGCACATCAACTTGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACCCGTCTTTCAGGAACCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACCCTCTGAATTTAGTTTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGGATTTATTCTGTCAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCAACTGCTTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAACCGCTGGACTGGTCAATCTG]

[+] EMBL AU173946             [GCTCTTCGCGTGCTCAACCGCTAATTCCCTCCCCTCTCCTCTCTCCCTCCGATCATTCGCGGCGGCGGCGGCGGCGACCGGCGACCGGCGGCCATGCGGGTGGCACCCAAGGTCCTCGTCCTCGTCCGCGACGCCGCCGGCTACGGCGCCGCCCTCGCCGACGCGCTCCGCCCAACGCCGGGGCTCACGAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGNTGCAGCATGTGCTATGAATGAGATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK070989             [ CTCTTCGCGTGCTCAACCGCTAATTCCCTCCCCTCTCCTCTCTCCCTCCGATCATTCGCGGCGGCGGCGGCGGCGACCGGCGACCGGCGGCCATGCGGGTGGCACCCAAGGTCCTCGTCCTCGTCCGCGACGCCGCCGGCTACGGCGCCGCCCTCGCCGACGCGCTCCGCCCAACGCCGGGGCTCACGAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTACAGATGTGGACCTTGAGGTGCTGCAGTGTGTAGGTGATCACTTGGCTAAGCACATCAACTTGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACCCGTCTTTCAGGAACCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACCCTCTGAATTTAGTTTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGGATTTATTCTGTCAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCAACTGCTTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAACCGCTGGACTGGTCAATCTG]
[+] EMBL CB642769             [                           CCTCCCCTTTAAACTCTCCCTCCGATCATTCGCGGCGGCGGCGGCGGCGACCGGCGACCGGCGGCCATGCGGGTGGCACCCAAGGTCCTCGTCCTCGTCCGCGACGCCGCCGGCTACGGCGCCGCCCTCGCCGACGCGCTCCGCCCAACGCCGGGGCTCACGAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTTTAGCGTTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTACAGATGTGGACCTTGAGGTGCTGCAGTGTGTAAGTGAT                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB666005             [                                          CTCCCTCCGATCATTCGCGGCGGCGGCGGCGGCGACCGGCGACCGGCGGCCATGCGGGTGGCACCCAAGGTCCTCGTCCTCGTCCGCGACGCCGCCGGCTACGGCGCCGCCCTCGCCGACGCGCTCCGCCCAACGCCGGGGCTCACGAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTACAGATGTGGACCTTGAGGTGCTGCAGTGTGCAGGTGATCACTTGGCTAAGCACATCAACTTGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACCCGTCTTTCAAGAACCATGGCGCGAACTGTACCAGTGA                                                                                                                                                                                                                                     ]
[+] EMBL CF340107             [                                             gagtagaaaATTCGCGGCGGCGGCGGCGGCGACCGGCGACCGGCGGCCATGCGGGTGGCACCCAAGGTCCTCGTCCTCGTCCGCGACGCCGCCGGCTACGGCGCCGCCCTCGCCGACGCGCTCCGCCCAACGCCGGGGCTCACGAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGCGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF339780             [                                                              CGGCGGCGGCGGCGACCGGCGACCGGCGGCCATGCGGGTGGCACCCAAGGTCCTCGTCCTCGTCCGCGACGCCGCCGGCTACGGCGCCGCCCTCGCCGACGCGCTCCGCCCAACGCCGGGGCTCACGAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTACAGAT                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_12608#0 GCTCTTCGCGTGCTCAACCGCTAATTCCCTCCCCTCTCCTCTCTCCCTCCGATCATTCGC GGCGGCGGCGGCGGCGACCGGCGACCGGCGGCCATGCGGGTGGCACCCAAGGTCCTCGTC CTCGTCCGCGACGCCGCCGGCTACGGCGCCGCCCTCGCCGACGCGCTCCGCCCAACGCCG GGGCTCACGAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACGGG GAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGTCC TTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTTTA GCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGACA AGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTGCT GAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTCCT CAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGTTG AATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTACA GATGTGGACCTTGAGGTGCTGCAGTGTGTAGGTGATCACTTGGCTAAGCACATCAACTTG GAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACCCGTCTTTCAGGAA CCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACCCTCTGAATTTAGT TTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGGATTTATTCTGTCA AAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCAACTGCTT CTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAACCGCTGG ACTGGTCAATCTG



consensusID : consensus_12608#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 969
fasta sequence
                              [CGTCGTCGCTGGATGCTTTTGCAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTACAGATGTGGACCTTGAGGTGCTGCAGTGTGTAGGTGATCACTTGGCTAAGCACATCAACTTGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACCCGTCTTTCAGGAACCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACCCTCTGAATTTAGTTTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGGATTTATTCTGTCAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCAACTGCTTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAACCGCTGGACTGGTCAATCTGGTCTTCTGGCAATCCTAATTTTCCCAAGGGTTGGTTGTTTGACTTGAGCGTGTAATGACTGGAATTAGTACTACAGAAGTTTGTCATCACTTGTTTGGTTGAT]

[+] EMBL AK059625             [CGTCGTCGCTGGATGCTTTTGCAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTACAGATGTGGACCTTGAGGTGCTGCAGTGTGTAGGTGATCACTTGGCTAAGCACATCAACTTGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACCCGTCTTTCAGGAACCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACCCTCTGAATTTAGTTTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGGATTTATTCTGTCAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCAACTGCTTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAACCGCTGGACTGGTCAATCTGGTCTTCTGGCAATCCTAATTTTCCCAAGGGTTGGTTGTTTGACTTGAGCGTGTAATGACTGGAATTAGTACTACAGAAGTTTGTCATCACTTGTTTGGTTGAT]
[-] EMBL CB666006             [                                                                                                                                                                                              TTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTACAGATGTGGACCTTGAGGTGCTGCAGTGTGCAGGTGATCACTTGGCTAAGCACATCAACTTGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACCCGTCTTTCAGGAACCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACCCTCTGAATTTAGTTTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGGATTTATTCTGTCAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCAACTGCTTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAACCGCTGGACTGGTCAATCTGGTCTTCTGGCAATCCTAATTTTCCCAAGGGTTGGTTGTTTGACTTGAGCGTGTAATGAGGGGAATTAGTACTACAGAAG                        ]
[-] EMBL CB642770             [                                                                                                                                                                                                AGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCGTCATTGTCCCATTTATGACAAGATCGCCAAGCTATTATCATGGAGCAAAAACAGGACAGTTAGGTACACTCCATGGTGGTGAAATAGGAGCACCCACTGAGTTTACTCAGATGTTAGTTGACGGAATTCATAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGTTTTACAGATGTGGACCTTGAGGTGCTGCAGTGTGTAGGTGATCACTTGGTTAAGCACATCACCTTGGAATTTAGCAAAGAAGCCGTTCTTCAGAGGGGGATGGAAAAATCGCCGGTTTTTCAGGATCCATGGCGCGA                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB678735             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACCCGCCTTTCAGGAACCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACCCTCTGAATTTAGTTTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGGATTTATTCTGTCAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCAACTGCTTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAACCGCTGGACTGGTCAATCTGGTCTTCTGGCAATCCTAATTTTCCCAAGGGTTGGTTGTTTGACTTGAGCGTGTAATGACTGGAATTAGTACTACAGAAGTTTGTCATCACTTGTTTGGTTGAT]
[+] EMBL AU057231             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAATTTAGTTTTGTAGNCCTTACATGTTGGACTNGTACGGTGTACCGGAATGCTGGATTTATTCTGTCAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCAACTGCTTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAACCGCTGGACTGGTCAATCTGGTCTTCTGGCAATCCTAATTTTCCCAAGGGTTGGTTGTTTGACTTGAGCGTGTAATGACTGGAATTAGTACTACAGAAGTTTGTCATCAaaaaa         ]


>consensus_12608#1 CGTCGTCGCTGGATGCTTTTGCAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTA CGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGA TCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTAT GAATGAGATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGT CCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTAC ACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAAC TACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAAT GGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGG AAAAAGCTCTACAGATGTGGACCTTGAGGTGCTGCAGTGTGTAGGTGATCACTTGGCTAA GCACATCAACTTGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACC CGTCTTTCAGGAACCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACC CTCTGAATTTAGTTTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGG ATTTATTCTGTCAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCT TGATCAACTGCTTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAG AAGAAACCGCTGGACTGGTCAATCTGGTCTTCTGGCAATCCTAATTTTCCCAAGGGTTGG TTGTTTGACTTGAGCGTGTAATGACTGGAATTAGTACTACAGAAGTTTGTCATCACTTGT TTGGTTGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12608#0      GCTCTTCGCGTGCTCAACCGCTAATTCCCTCCCCTCTCCTCTCTCCCTCCGATCATTCGC 60
consensus_12608#1      ------------------------------------------------------------
                                                                                   

consensus_12608#0      GGCGGCGGCGGCGGCGACCGGCGACCGGCGGCCATGCGGGTGGCACCCAAGGTCCTCGTC 120
consensus_12608#1      ------------------------------------------------------------
                                                                                   

consensus_12608#0      CTCGTCCGCGACGCCGCCGGCTACGGCGCCGCCCTCGCCGACGCGCTCCGCCCAACGCCG 180
consensus_12608#1      ------------------------------------------------CGTC-GTCGCTG 11
                                                                       ** *   *** *

consensus_12608#0      GG-GCTCACG-AGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACG 238
consensus_12608#1      GATGCTTTTGCAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCTCGACG 71
                       *  ***   * *************************************************

consensus_12608#0      GGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGT 298
consensus_12608#1      GGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCAGGTGT 131
                       ************************************************************

consensus_12608#0      CCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTT 358
consensus_12608#1      CCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGAGATTT 191
                       ************************************************************

consensus_12608#0      TAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGA 418
consensus_12608#1      TAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATTTATGA 251
                       ************************************************************

consensus_12608#0      CAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTG 478
consensus_12608#1      CAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCATGGTG 311
                       ************************************************************

consensus_12608#0      CTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTC 538
consensus_12608#1      CTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAAACTTC 371
                       ************************************************************

consensus_12608#0      CTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGT 598
consensus_12608#1      CTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACGTGTGT 431
                       ************************************************************

consensus_12608#0      TGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTA 658
consensus_12608#1      TGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAGCTCTA 491
                       ************************************************************

consensus_12608#0      CAGATGTGGACCTTGAGGTGCTGCAGTGTGTAGGTGATCACTTGGCTAAGCACATCAACT 718
consensus_12608#1      CAGATGTGGACCTTGAGGTGCTGCAGTGTGTAGGTGATCACTTGGCTAAGCACATCAACT 551
                       ************************************************************

consensus_12608#0      TGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACCCGTCTTTCAGG 778
consensus_12608#1      TGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACCCGTCTTTCAGG 611
                       ************************************************************

consensus_12608#0      AACCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACCCTCTGAATTTA 838
consensus_12608#1      AACCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACCCTCTGAATTTA 671
                       ************************************************************

consensus_12608#0      GTTTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGGATTTATTCTGT 898
consensus_12608#1      GTTTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGGATTTATTCTGT 731
                       ************************************************************

consensus_12608#0      CAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCAACTGC 958
consensus_12608#1      CAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCAACTGC 791
                       ************************************************************

consensus_12608#0      TTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAACCGCT 1018
consensus_12608#1      TTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAACCGCT 851
                       ************************************************************

consensus_12608#0      GGACTGGTCAATCTG--------------------------------------------- 1033
consensus_12608#1      GGACTGGTCAATCTGGTCTTCTGGCAATCCTAATTTTCCCAAGGGTTGGTTGTTTGACTT 911
                       ***************                                             

consensus_12608#0      ----------------------------------------------------------
consensus_12608#1      GAGCGTGTAATGACTGGAATTAGTACTACAGAAGTTTGTCATCACTTGTTTGGTTGAT 969
                                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)