cluster # 12634

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Oryza sativa
cluster # 12634 cluster # 12634 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12634#0 length = 1081 sequences # 6

consensus_12634#1 length = 552 sequences # 1
consensus_12634#2 length = 485 sequences # 4

consensusID : consensus_12634#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1081
fasta sequence

                              [CCCACCACCCCCTCATCCGCAACACCGCAGCTGCACCCGCATCCGCACCGCACCATCAGCGCGCACCAAGAAAGAAACACGGAGAAAAGAAAGATCGCCATGGCGCCGAGAACGTCGGACAAGACTATGTCACCGGCGGCCGCGGCCACCGGACTCGCGCTTGGCGTGGGCGGTGTCGCCGGAGCCGCCGCCGTGGGCACCGGCCAGCACTTCCGTGGCGTGAGGAAGCGGCCGTGGGGCCGTTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCCGCGCGCGCCTACGACGCCGCGGCGCGCGAGTACCGCGGTGCCAAGGCCAAGACCAACTTCCCCTACCCTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGCAGCAGCAACAGCAGCACCGTCGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCCATGCCGATCCCGCCGTCGCTCGAGCTCGACCTGTTCCACCGCGCCGCAGCGGCCGCGGCCGCCGGCGCAGGCGGCATGCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCCTTACTACTTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATCTTGATCTGAACTGTCCGCCGCCGATGGAGGTCTAGCAGCCGGAGTTTTTACATGATGACCGCTAGTTCATTTATTTCTTTTTAATTTTTAGTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTCGCCGGCGATGTAGTTTAAGAGA-AGATCACA-CCATGTGTGTCACCTAAGACATATCCTGCCGGCGTTGTTATGGAGCGGGATTATATATGTATTATTATTATTTTGATAGTCATGAGAAACTATGTAGAAACCC]

[+] EMBL AK111755             [CCCACCACCCCCTCATCCGCAACACCGCAGCTGCACCCGCATCCGCACCGCACCATCAGCGCGCACCAAGAAAGAAACACGGAGAAAAGAAAGATCGCCATGGCGCCGAGAACGTCGGACAAGACTATGTCACCGGCGGCCGCGGCCACCGGACTCGCGCTTGGCGTGGGCGGTGTCGCCGGAGCCGCCGCCGTGGGCACCGGCCAGCACTTCCGTGGCGTGAGGAAGCGGCCGTGGGGCCGTTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCCGCGCGCGCCTACGACGCCGCGGCGCGCGAGTACCGCGGTGCCAAGGCCAAGACCAACTTCCCCTACCCTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGCAGCAGCAACAGCAGCACCGTCGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCCATGCCGATCCCGCCGTCGCTCGAGCTCGACCTGTTCCACCGCGCCGCAGCGGCCGCGGCCGCCGGCGCAGGCGGCATGCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCCTTACTACTTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATCTTGATCTGAACTGTCCGCCGCCGATGGAGGTCTAGCAGCCGGAGTTTTTACATGATGACCGCTAGTTCATTTATTTCTTTTTAATTTTTAGTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTCGCCGGCGATGTAGTTTAAGAGA AGATCACA CCATGTGTGTCACCTAAGACATATCCTGCCGGCGTTGTTATGGAGCGGGATTATATATGTATTATTATTATTTTGATAGTCATGAGAAACTATGTAG      ]
[-] EMBL BI305776             [          CCTCATCCGCAACACCGCAGCTGCACCCGCATCCGCACCGCACCATCAGCGCGCACCAAGAAAGAAACACGGAGAAAAGAAAGATCGCCATGGCGCCGAGAACGTCGGACAAGACTATGTCACCGGCGGCCGCGGCCACCGGACTCGCGCTTGGCGTGGGCGGTGTCGCCGGAGCCACCGCCGTGGGCACCGGCCAGCACTTCCGTGGCGTGAGGAAGCGGCCGTGGGGCCGTTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCCGCGCGCGCCTACGACGCCGCGGCGCGCGAGTACCGCGGTGCCAAGGCCAAGACCAACTTCCCCTACCCTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGCAGCAGCAACAGCAGCACCGTCGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCCATGCCGATCCCGCCGTCGCTCGAGCTCGACCTGTTCCACCGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB641715             [                                            GCACCGCACCATCAGCGCGCACCAAGAAAGAAACACGGAGAAAAGAAAGATCGCCATGGCGCCGAGAACGTCGGACAAGACTATGTCACCGGCGGCCGCGGCCACCGGACTCGCGCTTGGCGTGGGCGGTGTCGCCGGAGCCGCCGCCGTGGGCACCGGCCAGCACTTCCGTGGCGTAAGGAAGCGGCCGTGGGGCCGTTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCCGCGCGCGCCTACGACGCCGCGGCGCGCGAGTACCGCGGTGCCAAGGCCAAGACCAACTTCCCCTACCCTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGCAGCAGCAACAGCAGCACCGTCGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCCATGCCGATCCCGCCGTCGCTCGAGCTCGACCTGTTCCACCGCGCCGCAGCGGCCGCGGCCGCCGGCGCAGGCGGCATGCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCCTTACTACTTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATCTTGATCTGAACTGTCCGCCGCCGATGGAGGTCTAGCAGCCGGAGTTTTTACATGATGACCGCTAGTTC                                                                                                                                                                                                                                                ]
[-] EMBL CB641716             [                                                                                                                                                                                                                                                                       CCCGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCCGCGCGCGCCTACGACGCCGCGGCGCGCGAGTACCGCGGTGCCAAGGCCAAGACCAACTTCCCCTACCCTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGCAGCAGCAACAGCAGCACCGTCGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCCATGCCGATCCCGCCGTCGCTCGAGCTCGACCTGTTCCACCGCGCCGCAGCGGCCGCGGCCGCCGGCGCAGGCGGCATGCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCCTTACTACTTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATCTTGATCTGAACTGTCCGCCGCCGATGGAGGTCTAGCAGCCGGAGTTTTTACATGATGACCGCTAGTTCATTTATTTCTTTTTAATTTTTAGTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTCGCCGGCGATGTAGTTTAAGAGA AGATCACACCCATGTGTGTCACCTAAGACAaaaaaaaag                                                                         ]
[-] EMBL CB622877             [                                                                                                                                                                                                                                                                                                                                                                                                                         TGAACAGGGGCAGCAGCAACAGCAGCACCGTTGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCCATGCCGATCCCGCTGTCGCTCGAGCTTGACCTGTTCCACCGCGCCGCAGCGGCCGCGGCCGCCGGCGCAGGCGGCATGCGTTTCCCTTTAGAGGGCTACCCCGTATCGCACCCTTACTACTTATTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGGGAAGAAAGCCATCGCTTTTGATCTTGATCTGAACTGTCCGCCGCCGATGGAGGTCTAGCAGCCGGAGTTTTTACATGATGACCGCTAGTTCATTTCTTTCTTTTTAATTTTTAGTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTCGCCGGCGATGTAGTTTAAGAAATAGATCACA CCATGTGTGTCACCTAAGACATATCCTGCCGGCGTTGTTATGGAGCGGGATTATATATGTATTATTATTATTTTGATAGTCATGAGAAACTATATAGAAACCC]
[+] EMBL CB967399             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCGCAGGCGGCATGCG TTCCCTTTCGAGGGCTACCCCGTATCGCACCCTTACTACTTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATCTTGATCTGAACTGTCCGCCGCCGATGGAGGTCTAGCAGCCGGAGTTTTTACATGATGACCGCTAGTTCATTTCTTTCTTTTTAATTTTTAGTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTCGCCGGCGATGTAGTTTAAGAGA AGATC                                                                                                           ]




>consensus_12634#0
CCCACCACCCCCTCATCCGCAACACCGCAGCTGCACCCGCATCCGCACCGCACCATCAGC
GCGCACCAAGAAAGAAACACGGAGAAAAGAAAGATCGCCATGGCGCCGAGAACGTCGGAC
AAGACTATGTCACCGGCGGCCGCGGCCACCGGACTCGCGCTTGGCGTGGGCGGTGTCGCC
GGAGCCGCCGCCGTGGGCACCGGCCAGCACTTCCGTGGCGTGAGGAAGCGGCCGTGGGGC
CGTTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTC
GACACGGCCGAGGAGGCCGCGCGCGCCTACGACGCCGCGGCGCGCGAGTACCGCGGTGCC
AAGGCCAAGACCAACTTCCCCTACCCTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGC
AGCAGCAACAGCAGCACCGTCGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCC
ATGCCGATCCCGCCGTCGCTCGAGCTCGACCTGTTCCACCGCGCCGCAGCGGCCGCGGCC
GCCGGCGCAGGCGGCATGCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCCTTACTAC
TTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCG
CCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTG
GATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATCTTGAT
CTGAACTGTCCGCCGCCGATGGAGGTCTAGCAGCCGGAGTTTTTACATGATGACCGCTAG
TTCATTTATTTCTTTTTAATTTTTAGTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAG
ACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTCGCCGGCGATGTA
GTTTAAGAGAAGATCACACCATGTGTGTCACCTAAGACATATCCTGCCGGCGTTGTTATG
GAGCGGGATTATATATGTATTATTATTATTTTGATAGTCATGAGAAACTATGTAGAAACC
C

consensusID : consensus_12634#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 552
fasta sequence

                              [GTACACGGAATTTTTCTACTACTAAAAATTAAAAAGAAAGAAATGAACTAGCGGTCATCATGTAAAAACTCCGGCTGCTAGACCTCCATCGGCGGCGGACAGTTCAGATCAAGATCAAAAGCGATGGCTTTCTTCGCCAACGCGGCGGGCGGTGATGGTGCCAGATCCACGATCGACGAGGAGTCGGACTCGCGCTTGGCGTGGGCGGTGTCGCCGGAGCCGCCGCCGTGGGCACCGGCCAGCACTTCCGTGGCGTGAGGAAGCGGCCGTGGGGCCGTTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCCGCGCGCGCCTACGACGCCGCGGCGCGCGAGTACCGCGGTGCCAAGGCCAAGACCAACTTCCCCTACCCTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGCAGCAGCAACAGCAGCACCGTCGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCCATGCCGATCCCGCCGTCGCTCGAGCTCGACCGTTCCA]

[-] EMBL BI305323             [GTACACGGAATTTTTCTACTACTAAAAATTAAAAAGAAAGAAATGAACTAGCGGTCATCATGTAAAAACTCCGGCTGCTAGACCTCCATCGGCGGCGGACAGTTCAGATCAAGATCAAAAGCGATGGCTTTCTTCGCCAACGCGGCGGGCGGTGATGGTGCCAGATCCACGATCGACGAGGAGTCGGACTCGCGCTTGGCGTGGGCGGTGTCGCCGGAGCCGCCGCCGTGGGCACCGGCCAGCACTTCCGTGGCGTGAGGAAGCGGCCGTGGGGCCGTTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCCGCGCGCGCCTACGACGCCGCGGCGCGCGAGTACCGCGGTGCCAAGGCCAAGACCAACTTCCCCTACCCTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGCAGCAGCAACAGCAGCACCGTCGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCCATGCCGATCCCGCCGTCGCTCGAGCTCGACCGTTCCA]




>consensus_12634#1
GTACACGGAATTTTTCTACTACTAAAAATTAAAAAGAAAGAAATGAACTAGCGGTCATCA
TGTAAAAACTCCGGCTGCTAGACCTCCATCGGCGGCGGACAGTTCAGATCAAGATCAAAA
GCGATGGCTTTCTTCGCCAACGCGGCGGGCGGTGATGGTGCCAGATCCACGATCGACGAG
GAGTCGGACTCGCGCTTGGCGTGGGCGGTGTCGCCGGAGCCGCCGCCGTGGGCACCGGCC
AGCACTTCCGTGGCGTGAGGAAGCGGCCGTGGGGCCGTTACGCGGCGGAGATCCGCGACC
CGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCCGCGCGCG
CCTACGACGCCGCGGCGCGCGAGTACCGCGGTGCCAAGGCCAAGACCAACTTCCCCTACC
CTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGCAGCAGCAACAGCAGCACCGTCGAGT
CGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCCATGCCGATCCCGCCGTCGCTCGAGC
TCGACCGTTCCA

consensusID : consensus_12634#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 485
fasta sequence

                              [GGAATAGCGCGGTTGCGGCGCAGGCGG-ATGCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCCTTACTACTTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATC--TTGATCTGAACTGTCCGC--CGCCGATG--GAGGTCT-AGCAGCCGGAGTTTTTACA-TGA-TGACCGCTAGTTCATTTCT-TTCTTTTTAA-TTTTTA-GTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTCGCCGGCGATGTAGTTTAAGAGAAGATCACACCATGTGTGTCACCTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB964632             [GGAATAGCGCGGTTGCGGCGCAGGCGG ATGCG TTCCCTTTCGAGGGCTA CCCGTATCG ACCCTTACTACTTCTTTGGACAAGCGG CG CGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATC  TTGATCTGAACTGTCCGC  CGCCGATG  GAGGTCT AGCAGCCGGAGTTTTTACA TGA TGACCGCTAGTTCATTTCT TTCTTTTTAA TTTTTA GTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTCGCCGGCGATGTAGTTTAAGAGAAGATCACACCATGTGTGTCACCTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB966916             [                GGCGCAGGCGG ATGCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCCTTACTACTTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATC  TTGATCTGAACTGTCCGC  CGCCGATG  GAGGTCT AGCAGCCGGAGTTTTTACA TGA TGACCGCTAGTTCATTTCT TTCTTTTTAA TTTTTA GTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTCTTGTAAATAGTTTTTTTCGCCGGCGATGTAGTTTAAGAGAAGATCACACCATGTGTGTCACCTAAAAAAAACAAAAAAAAAAA]
[+] EMBL BU673509             [                      GGCGGCATGCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCCTTACTACTTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATC  TTGATCTGAACTGTCCGC  CGCCGATG  GAGGTCT AGCAGCCGGAGTTTTTACA TGA TGACCGCTAGTTCATTTCT TTCTTTTTAA TTTTTA GTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTCGCCGGCGATGTAGTTTAAGAGAAGATCACACCATGTGTGTCACCTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BU673080             [                              GCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCCTTACTACTTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATGCTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCTTTTGATCCNTTGATCTGAACTGTCCGCNNCGCCGATGNNGAGGTCTAAGCAGCCGGAGTTTTTACACTGACTGACCGCTAGTTCATTTCTNTTCTTTTTAACTTTTTAGGTAGTAGAAAAATTCCGTGTACCTCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTCGCCGGCGATGTAGTTTAAGAGAAGATCACACCATG                              ]




>consensus_12634#2
GGAATAGCGCGGTTGCGGCGCAGGCGGATGCGTTTCCCTTTCGAGGGCTACCCCGTATCG
CACCCTTACTACTTCTTTGGACAAGCGGCCGCCGCCGCCGCCGCCTCTGGTTGCCGCATG
CTCAAGATTGCGCCGGCGCCGGTCACCGTGGCCGCCTTGGCACAGAGCGACTCCGACTCC
TCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAAGCCATCGCT
TTTGATCTTGATCTGAACTGTCCGCCGCCGATGGAGGTCTAGCAGCCGGAGTTTTTACAT
GATGACCGCTAGTTCATTTCTTTCTTTTTAATTTTTAGTAGTAGAAAAATTCCGTGTACC
TCTTATGCCTAGACCCTCTTGCTTAACTGAGGGAAGACATTTTTGTAAATAGTTTTTTTC
GCCGGCGATGTAGTTTAAGAGAAGATCACACCATGTGTGTCACCTAAAAAAAAAAAAAAA
AAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12634#0      CCCACCACCCCCTCATCCGCAACACCGCAGCTGCACCCGCATCCGCACCGCACCATCAGC 60
consensus_12634#2      ------------------------------------------------------------
consensus_12634#1      ------------------------------------------------------------
                                                                                   

consensus_12634#0      GCGCACCAAGAAAGAAACACGGAGAAAAGAAAGATCGCCATGGCGCCGAGAACGTCGGAC 120
consensus_12634#2      ------------------------------------------------------------
consensus_12634#1      ------------------------------------------------------------
                                                                                   

consensus_12634#0      AAGACTATGTCACCGGCGGCCGCGGCCACCGGACTCGCGCTTGGCGTGGGCGGTGTCGCC 180
consensus_12634#2      ------------------------------------------------------------
consensus_12634#1      ------------------------------------------------------------
                                                                                   

consensus_12634#0      GGAGCCGCCGCCGTGGGCACCGGCCAGCACTTCCGTGGCGTGAGGAAGCGGCCGTGGGGC 240
consensus_12634#2      ------------------------------------------------------------
consensus_12634#1      ------------------------------------------------------------
                                                                                   

consensus_12634#0      CGTTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTC 300
consensus_12634#2      ------------------------------------------------------------
consensus_12634#1      ------------------------------------------------------------
                                                                                   

consensus_12634#0      GACACGGCCGAGGAGGCCGCGCGCGCCTACGACGCCGCGGCGCGCGAGTACCGCGGTGCC 360
consensus_12634#2      ------------------------------------------------------------
consensus_12634#1      ------------------------------------------------------------
                                                                                   

consensus_12634#0      AAGGCCAAGACCAACTTCCCCTACCCTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGC 420
consensus_12634#2      ------------------------------------------------------------
consensus_12634#1      ------------------------------------------------------------
                                                                                   

consensus_12634#0      AGCAGCAACAGCAGCACCGTCGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCC 480
consensus_12634#2      ------------------------------------------------------------
consensus_12634#1      ------------------------------------------------------------
                                                                                   

consensus_12634#0      ATGCCGATCCCGCCGTCGCTCGAGCTCGACCTGTTCCACCGCGCCGCAGCGGCCGCGGCC 540
consensus_12634#2      ---------------------------------------------GGAATAGC-GCGGTT 14
consensus_12634#1      -GTACACGGAATTTTTCTACTACTAAAAATTAAAAAGAAAGAAATGAACTAGCGGTCATC 59
                                                                    * *   ** *     

consensus_12634#0      GCC----GGCGCAGGCGGCATGCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCC--- 593
consensus_12634#2      GC-----GGCGCAGGCGG-ATGCGTTTCCCTTTCGAGGGCTACCCCGTATCGCACCC--- 65
consensus_12634#1      ATGTAAAAACTCCGGCTGCTAGACCTCCATCGGCGGCGGACAGTTCAGATCAAGATCAAA 119
                                * * *** *   *   * *     **  **  *   *  ***     *   

consensus_12634#0      --TTACTACTTCTTTGGACAA-GCGGCCGCCGCCGCCGCCGCC-----TCTGGTTGCCGC 645
consensus_12634#2      --TTACTACTTCTTTGGACAA-GCGGCCGCCGCCGCCGCCGCC-----TCTGGTTGCCGC 117
consensus_12634#1      AGCGATGGCTTTCTTCGCCAACGCGGCGGGCGGTGATGGTGCCAGATCCACGATCGACGA 179
                           *   ***  ** * *** ***** * **  *  *  ***        * * * ** 

consensus_12634#0      ATGCTCAAGATTGCGCC-GGCGCCGG-----TCACCGTGGCCGCCTTGGCACAGAGCGAC 699
consensus_12634#2      ATGCTCAAGATTGCGCC-GGCGCCGG-----TCACCGTGGCCGCCTTGGCACAGAGCGAC 171
consensus_12634#1      GGAGTCGGACTCGCGCTTGGCGTGGGCGGTGTCGCCGGAGCCGCCGCCGTGGGCACCGGC 239
                           **    * ****  ****  **     ** ***  ******   *     * ** *

consensus_12634#0      TCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAA 759
consensus_12634#2      TCCGACTCCTCGTCGATCGTGGATCTGGCACCATCACCGCCCGCCGCGTTGGCGAAGAAA 231
consensus_12634#1      CAGCACTTC-CGTGGCGTGAGGAAGCGGCCGTGGGGCCGTT--ACGCGGCGGAGATCCGC 296
                           *** * *** *   * ***   ***       ***     ****  ** **     

consensus_12634#0      GCCATCGCTTTTGATCTTGATCTG-AACTGTCCGCCGCCGATGGAGGTCTAGCAGCCGGA 818
consensus_12634#2      GCCATCGCTTTTGATCTTGATCTG-AACTGTCCGCCGCCGATGGAGGTCTAGCAGCCGGA 290
consensus_12634#1      GACCCGGCCAAGAAGAGCCGCGTGTGGCTCGGCACGTTCGACAC-GGCCGAGGAGGCCGC 355
                       * *   **     *        **   **   * *   ***    ** * ** ** * * 

consensus_12634#0      GTTTTTACATGATGACCGCTAGTTCATTTATTTCTTTTTAATTTTTAGTAGTAGAAAAAT 878
consensus_12634#2      GTTTTTACATGATGACCGCTAGTTCATTTCTTTCTTTTTAATTTTTAGTAGTAGAAAAAT 350
consensus_12634#1      GCGCGCCTACGACG-CCGC-GGCGCGCGAGTACC---GCGGTGCCAAGGCCAAGACCAAC 410
                       *       * ** * ****  *  *     *  *       *    **    ***  ** 

consensus_12634#0      TCCGTGTACCTCTTATGCCTAGACC--CTCTTGCTTAACTGAGGGAAGACATTTTTGTAA 936
consensus_12634#2      TCCGTGTACCTCTTATGCCTAGACC--CTCTTGCTTAACTGAGGGAAGACATTTTTGTAA 408
consensus_12634#1      TTCCCCTACC-CTAACGGCGCGCCCGCCGCCGGTGTGAACAGCGGCAGCAGCAACAGCAG 469
                       * *   **** ** * * *  * **  * *  *  * *     ** **        * * 

consensus_12634#0      ----ATAGTTTTTTTCGCCGGCGATGTA---GTTTAAGAGAAGATCACACCATGTGTGTC 989
consensus_12634#2      ----ATAGTTTTTTTCGCCGGCGATGTA---GTTTAAGAGAAGATCACACCATGTGTGTC 461
consensus_12634#1      CACCGTCGAGTCGTTCGGCAGCGACGTGCAGGCGCCCATGAAGGCCATGCCGATCCCGCC 529
                            * *  *  **** * **** **    *       ****  **  **      * *

consensus_12634#0      ACCTAAGACATATCCTGCCGGCGTTGTTATGGAGCGGGATTATATATGTATTATTATTAT 1049
consensus_12634#2      ACCTAAAAAAAAAAAAAAAAAAAA------------------------------------ 485
consensus_12634#1      GTCGCTCGAGCTCGACCGTTCCA------------------------------------- 552
                         *                                                         

consensus_12634#0      TTTGATAGTCATGAGAAACTATGTAGAAACCC 1081
consensus_12634#2      --------------------------------
consensus_12634#1      --------------------------------