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Oryza sativa
cluster # 12654 cluster # 12654       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12654#0 length = 1842 sequences # 10  
consensus_12654#1 length = 186 sequences # 1  

consensusID : consensus_12654#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1842
fasta sequence
                              [AGCAGCAATGCAGCCTCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCTCGCCACGGCCGGTTCTCTCCCGCCGCCACGCCTCGCCGCCGCTCGCCACCGAGACGCTCGACGTCGCCGCGTCGCTGTCCCGGGCGCGGGCCGCGG-TATCCGCGGAGGCCGTGCCGCTCCACCAGTCCGCCGCCGCCGCCGTG-TCCACGGAGGTCGTCGGGGAGGAGCACGAGGAGGGGCGCCTGGCCCTGCGGCTCCACTCCCGGGACTTCTTGCCGGAGGAGCAGGGGCGGCAGCGGCACGCCAGCTACAGGTCACTCGTGCTGGCTCGCCTCCGCCGCGACTCCGCCCGCGCCGCCGCGGTGTCGGCCCGCGCGGCGATGGCGGCGGACGGGGTGAGTCGGTTCGACCTGGTGCCGGCCAACGTCACGGCGTTCGAGGCGTCGGCGGCGGAGATACAGGGCCCCGTGGTGTCCGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCCCCGCGCGGCAGCTGTACATGGTGCTCGACACCGGCAGCGACGTCACCTGGGTGCAATGCCAGCCGTGCGCCGACTGCTACCAGCAGTCCGACCCGGTGTTCGACCCTTCCCTCTCCACCTCCTACGCCTCCGTCGCCTGCGACAACCCGCGCTGCCACGACCTCGACGCCGCCGCCTGCCGCAACTCCACCGGCGCCTGCCTCTACGAGGTCGCGTACGGCGACGGCTCCTACACCGTCGGCGACTTCGCCACCGAGACGCTCACGCTCGGCGACTCCGCCCCGGTCTCCAGCGTCGCCATAGGCTGCGGCCACGACAACGAGGGGCTGTTCGTCGGCGCGGCGGGGCTGCTTGCCCTCGGCGGCGGGCCACTCTCCTTCCCGTCCCAGATCTCCGCCACCACCTTCTCCTACTGCCTCGTCGACCGTGACTCCCCCTCCTCGTCAACCCTCCAGTTCGGCGACGCCGCCGACGCGGAGGTGACGGCGCCGCTGATCCGCAGCCCGCGGACGAGCACGTTCTACTACGTGGGCCTCTCGGGCCTCTCCGTCGGTGGCCAGATCCTCTCCATCCCACCCTCGGCGTTCGCCATGGACAGCACGGGCGCCGGCGGCGTCATCGTGGACTCCGGCACGGCGGTGACGCGGCTGCAGTCGTCGGCGTACGCGGCGCTGCGCGACGCGTTCGTCCGGGGCACCCAGTCGCTGCCGCGCACCTCCGGCGTGTCGCTGTTCGACACGTGCTACGACCTGTCGGACCGGACGAGCGTGGAGGTCCCCGCGGTGTCGCTGCGGTTCGCCGGCGGCGGCGAGCTCCGGCTGCCGGCGAAGAACTACCTGATCCCGGTGGACGGCGCGGGGACGTACTGCCTGGCGTTCGCGCCGACGAACGCGGCGGTGTCCATCATCGGGAACGTGCAGCAG-CAGGGGACCCGCGTCAGCTTCGACACGGCCAAGTCCACCGTCGGCTTCACCACCAACAAGTGCTAAGTCATTAG-CAGCGATGGCTTAACTTAATTAGCCAGATCAAGGAGTGATTAGTGGTGGTAAATGGTAATTAAGCGCGAGAGTGTGTGATGTGGGGGTGGGGCCCAGTGCCAGGCTCTGTGGGCTTTGGGAGAGACGAAAGGCGA-GGACAAATGCCAGCCTGTCCTGCTCTCTGCTTGTCGATGGATGGGGGGGCCCACTCTCTTCTTCTCCGGTGCTTTGCTGTTTCGTCTTTGATGTCTCGGCAAAGACGAATTAAAATGAATCCATTCCAATCTGTTCATGTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU166073             [AGCAGCAATGCAGCCTCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCTCGCCACGGCCGGTTCTCTCCCGCCGCCACGCCTCGCCGCCGCTCGCCACCGAGACGCTCGACGTCGCCGCGTCGCTGTCCCGGGCGC GGCCGCGGTTATCCGC GAGGCCGTGCCGCTCCACCAGTCCGCCGCCGCCGCCGTGTTCCACGGAGGTCGTCGGGGAGGAGCACGAGGAGGGGCGCCTGGCCCTGNGGCTCCACTCCCGGGA TTCTTGCCGGA GAGCAGGGGC GCA AGGCAC CCAGCTACA GTCACTCGTGCTGGNTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C74555               [ GCAGCAATGCAGCCTCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCTCGCCACGGCCGGTTCTCTCCCGCCGCCACGCCTCGCCGCCGCTCGCCACCGAGACGCTCGACGTCGCCGCGTCGCTGTCCCGGGCGCGGGCCGCGG TATCCGCGAAGGCCGTGCCGCTCCANCAGTCCGCCGCCGCCGCCGTG TCCACGGAGGTCGTCGGGGAGGAGCACGAGGAGGGGCGCCTGGCCCTGCGGCTCCANTCCCGGGANTTCTTGCCGGAGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB651823             [           AGCCTCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCTCGCCACGGCCGGTTCTCTCCCGCCGCCACGCCTCGCCGCCGCTCGCCACCGAGACGCTCGACGTCGCCGCGTCGCTGTCCCGGGCGCGGGCCGCGG TATCCGCGGAGGCCGTGCCGCTCCACCAGTCCGCCGCCGCCGCCGTG TCCACGGAGGTCGTCGGGGAGGAGCACGAGGAGGGGCGCCTGGCCCTGCGGCTCCACTCCCGGGACTTCTTGCCGGAGGAGCAGGGGCGGCAGCGGCACGCCAGCTACAGGTCACTCGTGCTGGCTCGCCTCCGCCGCGACTCCGCCCGCGCCGCCGCGGTGTCGGCCCGCGCGGCGATGGCGGCGGACGGGGTGAGTCGGTTCGACCTGGTGCCGGCCAACGTCACGGCGTTCGAGGCGTCGGCGGCGGAGATACAGGGCCCCGTGGTGTCCGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCCCCGCGCGGCAGCTGTACATGGTGCTCGACACCGGCAGCGACGTCACCTGGGTGCAATGCCAGCCGTGCGCCGACTGCTACCAGCAGTCCGACCCGGTGTTCGACCCTTCCCTCTCCACCTCCTACGCCTCCGTCGCCTGCGACAACCCGCGCTGCCACGACCTCGACGCCGCCGCCTGCCGCAACTCCACCGGCGCCTGCCTCTACGAGGTCGCGTACGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK068990             [               TCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCTCGCCACGGCCGGTTCTCTCCCGCCGCCACGCCTCGCCGCCGCTCGCCACCGAGACGCTCGACGTCGCCGCGTCGCTGTCCCGGGCGCGGGCCGCGG TATCCGCGGAGGCCGTGCCGCTCCACCAGTCCGCCGCCGCCGCCGTG TCCACGGAGGTCGTCGGGGAGGAGCACGAGGAGGGGCGCCTGGCCCTGCGGCTCCACTCCCGGGACTTCTTGCCGGAGGAGCAGGGGCGGCAGCGGCACGCCAGCTACAGGTCACTCGTGCTGGCTCGCCTCCGCCGCGACTCCGCCCGCGCCGCCGCGGTGTCGGCCCGCGCGGCGATGGCGGCGGACGGGGTGAGTCGGTTCGACCTGGTGCCGGCCAACGTCACGGCGTTCGAGGCGTCGGCGGCGGAGATACAGGGCCCCGTGGTGTCCGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCCCCGCGCGGCAGCTGTACATGGTGCTCGACACCGGCAGCGACGTCACCTGGGTGCAATGCCAGCCGTGCGCCGACTGCTACCAGCAGTCCGACCCGGTGTTCGACCCTTCCCTCTCCACCTCCTACGCCTCCGTCGCCTGCGACAACCCGCGCTGCCACGACCTCGACGCCGCCGCCTGCCGCAACTCCACCGGCGCCTGCCTCTACGAGGTCGCGTACGGCGACGGCTCCTACACCGTCGGCGACTTCGCCACCGAGACGCTCACGCTCGGCGACTCCGCCCCGGTCTCCAGCGTCGCCATAGGCTGCGGCCACGACAACGAGGGGCTGTTCGTCGGCGCGGCGGGGCTGCTTGCCCTCGGCGGCGGGCCACTCTCCTTCCCGTCCCAGATCTCCGCCACCACCTTCTCCTACTGCCTCGTCGACCGTGACTCCCCCTCCTCGTCAACCCTCCAGTTCGGCGACGCCGCCGACGCGGAGGTGACGGCGCCGCTGATCCGCAGCCCGCGGACGAGCACGTTCTACTACGTGGGCCTCTCGGGCCTCTCCGTCGGTGGCCAGATCCTCTCCATCCCACCCTCGGCGTTCGCCATGGACAGCACGGGCGCCGGCGGCGTCATCGTGGACTCCGGCACGGCGGTGACGCGGCTGCAGTCGTCGGCGTACGCGGCGCTGCGCGACGCGTTCGTCCGGGGCACCCAGTCGCTGCCGCGCACCTCCGGCGTGTCGCTGTTCGACACGTGCTACGACCTGTCGGACCGGACGAGCGTGGAGGTCCCCGCGGTGTCGCTGCGGTTCGCCGGCGGCGGCGAGCTCCGGCTGCCGGCGAAGAACTACCTGATCCCGGTGGACGGCGCGGGGACGTACTGCCTGGCGTTCGCGCCGACGAACGCGGCGGTGTCCATCATCGGGAACGTGCAGCAG CAGGGGACCCGCGTCAGCTTCGACACGGCCAAGTCCACCGTCGGCTTCACCACCAACAAGTGCTAAGTCATTAG CAGCGATGGCTTAACTTAATTAGCCAGATCAAGGAGTGATTAGTGGTGGTAAATGGTAATTAAGCGCGAGAGTGTGTGATGTGGGGGTGGGGCCCAGTGCCAGGCTCTGTGGGCTTTGGGAGAGACGAAAGGCGA GGACAAATGCCAGCCTGTCCTGCTCTCTGCTTGTCGATGGATGGGGGGGCCCACTCTCTTCTTCTCCGGTGCTTTGCTGTTTCGTCTTTGATGTCTCGGCAAAGACGAATTAAAATGAATCCATTCCAATCTGT                                           ]
[+] EMBL CB674981             [                                                                                                                                                                                       TCCACCAGTCCGCCGCCGCCGCCGTG TCCACGGAGGTTGTCGGGGAGGAGCACGAGGAGGGGCGCCTGGCCCTGCGGCTCCACTCCCGGGACTTCTTGCCGGAGGAGCAGGGGCGGCAGCGGCACGCCAGCTACAGGTCACTCGTGCTGGCTCGCCTCCGCCGCGACTCCGCCCGCGCCGCCGCGGTGTCGGCCCGCGCGGCGATGGCGGCGGACGGGGTGAGTCGGTTCGACCTGGTGCCGGCCAACGTCACGGCGTTCGAGGCGTCGGCGGCGGAGATACAGGGCCCCGTGGTGTCCGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCCCCGCGCGGCAGCTGTACATGGTGCTCGACACCGGCAGCGACGTCACCTGGGTGCAATGCCAGCCGTGCGCCGACTGCTACCAGCAGTCCGACCCGGTGTTCGACCCTTCCCTCTCCACCTCCTACGCCTCCGTCGCCTGCGACAACCCGCGCTGCCACGACCTCGACGCCGCCGCCTGCCGCAACTCCACCGGCGCCTGCCTCTACGAGGTCGCGTACGGCGACGGCTCCTACACCGTCGGCGACTTCGCCACCGAGACGCTCACGCTCGGCGACTCCGCCCCGGTCTCCAGCGTCGCCATAGGCTGCGGCCACGACAACGAGGGGCTGTTCGTCGGCGCGGCGGGGCTGCTTGCCCTCGGCGGCGGGCCACTCTCCTT CCGTCCCAGATCTCCGCCACCACCTTCTCCTACTGCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB651824             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTTCGGCGACGCCGCCGACGCGGAGGTGACGGCGCCGCTGATCCGCAGCCCGCGGACGAGCACGTTCTACTACGTGGGCCTCTCGGGCCTCTCCGTCGGTGGCCAGATCCTCTCCATCCCACCCTCGGCGTTCGCCATGGACAGCACGGGCGCCGGCGGCGTCATCGTGGACTCCGGCACGGCGGTGACGCGGCTGCAGTCGTCGGCGTACGCGGCGCTGCGCGACGCGTTCGTCCGGGGCACCCAGTCGCTGCCGCGCACCTCCGGCGTGTCGCTGTTCGACACGTGCTACGACCTGTCGGACCGGACGAGCGTGGAGGTCCCCGCGGTGTCGCTGCGGTTCGCCGGCGGCGGCGAGCTCCGGCTGCCGGCGAAGAACTACCTGATCCCGGTGGACGGCGCGGGGACGTACTGCCTGGCGTTCGCGCCGACGAACGCGGCGGTGTCCATCATCGGGAACGTGCAGCAG CAGGGGACCCGCGTCAGCTTCGACACGGCCAAGTCCACCGTCGGCTTCACCACCAACAAGTGCTAAGTCATTAG CAGCGATGGCTTAACTTAATTAGCCAGATCAAGGAGTGATTAGTGGTGGTAAATGGTAATTAAGCGCGAGAGTGTGTGATGTGGGGGTGGGGCCCAGTGCCAGGCTCTGTGGGCTTTGGGAGAGACGAAAGGCGA GGACAAATGCCAGCCTGTCCTGCTCTCTGCTTGTCGATGGATGGGGGGGCCCACTCTCTTCTTCTCCGGTGCTTTGCTGTTTCGTCTTTGATGTCTCGGCAAAGACGAATTAAAATGAATCCATTCCAATCTGT                                           ]
[-] EMBL CB674982             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGATCCGCAGCCCGCGGACGAGCACGTTCTACTACGTGGGCCTCTCGGGCCTCTCCGTCGGTGGCCAGATCCTCTCCATCCCACCCTCGGCGTTCGCCATGGACAGCACGGGCGCCGGCGGCGTCATCGTGGACTCCGGCACGGCGGTGACGCGGCTGCAGTCGTCGGCGTACGCGGCGCTGCGCGACGCGTTCGTCCGGGGCACCCAGTCGCTGCCGCGCACCTCCGGCGTGTCGCTGTTCGACACGTGCTACGACCTGTCGGACCGGACGAGCGTGGAGGTCCCCGCGGTGTCGCTGCGGTTCGCCGGCGGCGGCGAGCTCCGGCTGCCGGCGAAGAACTACCTGATCCCGGTGGACGGCGCGGGGACGTACTGCCTGGCGTTCGCGCCGACGAACGCGGCGGTGTCCATCATCGGGAACGTGCAGCAG CAGGGGACCCGCGTCAGCTTCGACACGGCCAAGTCCACCGTCGGCTTCACCACCAACAAGTGCTAAGTCATTAG CAGCGATGGCTTAACTTAATTAGCCAGATCAAGGAGTGATTAGTGGTGGTAAATGGTAATTAAGCGCGAGAGTGTGTGATGTGGGGGTGGGGCCCAGTGCCAGGCTCTGTGGGCTTTGGGAGAGACGAAAGGCGA GGACAAATGCCAGCCTGTCCTGCTCTCTGCTTGTCGATGGATGGGGGGGCCCACTCTCTTCTTCTCCGGTGCTTTGCTGTTTCGTCTTTGATGTCTCGGCAAAGACGAATTAAAATGAATCCATTCCAA                                                ]
[+] EMBL AU075695             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cgGCTGC CGACGCGTTCGTCCGGGGCACCCAGT  CTGCCGCNCA CTCCGGCGTNTCGCTGTTCGACACGTGCTACGACCTNTCGGACCGGACGAGCTTGGAGGTCCCCGCGNTGTCGCTGCGGTTC CCGGCGGCGGCGAGNTCCGGCTGCCGGCGAAGAACTACCTGATCCCGGTGGACGGCGCGGGGACGTACTGCCTGGCGTTCGCGCCGACGAACGCGGCGGTGTCCATCATCGGGAACGTGCAGCAG CAGGGGACCCGCGTCAGCTTCGACACGGCCAAGTCCACCGTCGGCTTCACCACCAACAAGTGCTAAGTCATTAG CAGCGATGGCTTAACTTAATTAGCCAGATCAAGGAGTGATTAGTGGTGGTAAATGGTAATTAAGCGCGAGAGTGTGTGATGTGGGGGTGGGGCCCAGTGCCAGGCTCTGTGGGCTTTGGGAGAGACGAAAGGCGA GGACAAATGCCAGCCTGTCCTGCTCTCTGCTTGTCGATGGATGGGGGGGCCCACTCTCTTCTTCTCCGGTGCTTTGCTGTTTCGTCTTTGATGTCTCGGCAAAGACGAATTAAAATGAATCCATTCCAATCTGTTCATGTGTTCAAAAAAAAAAAAAAAAA                ]
[+] EMBL AU029516             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCGGCGGCGAGCTCCGGCTNCCGGCGAAGAACTACCTGATCCCGGTGGACGGCNCGGGGACGTACTGCCTGGCGTTCGCGCCGACGAACGCGGCGGTGTCC TCATCGGGAACGTGCAGCAGCCAGGGGACCCGCGTCAGCTTCGACACGGCCAAGTCCACCGTCGGCTTCACCACCAACAAGTGCTAAGTCATTAGCCAGCGATGGCTTAACTTAATTAGCCAGATCAAGGAGTGATTAGTGGTGGTAAATGGTAATTAAGCGCGAGAGTGTGTGATNTGGGGGTGGGGCCCAGTGCCAGGCTCTGTGGGCTTTGGGAGAGACGAAAGGCGA GGACAAATGCCAGCCTGTCCTGCTCTCTGCTTGTCGATGGATGGGGGGGCCCACTCTCTTCTTCTCCGGTGCTTTGCTGTTTCGTCTTTGATGTCTCGGCAAAGACGAATTAAAATGAATCCATTCCAATCTGTTCATGTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL OS38030              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCCTTGGGAGAGACGAAAGGCGACGGACAAATGCCAGCCTGTCCTGCTCTCTGCTTGTCGATGGATGGGGGGG CCACTCTCTTCTTCTCCGGTGCTTTGCTGTTTCGTCTTTGATGTCTCGGCA                                                                            ]


>consensus_12654#0 AGCAGCAATGCAGCCTCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGC CGCCTCGCCACGGCCGGTTCTCTCCCGCCGCCACGCCTCGCCGCCGCTCGCCACCGAGAC GCTCGACGTCGCCGCGTCGCTGTCCCGGGCGCGGGCCGCGGTATCCGCGGAGGCCGTGCC GCTCCACCAGTCCGCCGCCGCCGCCGTGTCCACGGAGGTCGTCGGGGAGGAGCACGAGGA GGGGCGCCTGGCCCTGCGGCTCCACTCCCGGGACTTCTTGCCGGAGGAGCAGGGGCGGCA GCGGCACGCCAGCTACAGGTCACTCGTGCTGGCTCGCCTCCGCCGCGACTCCGCCCGCGC CGCCGCGGTGTCGGCCCGCGCGGCGATGGCGGCGGACGGGGTGAGTCGGTTCGACCTGGT GCCGGCCAACGTCACGGCGTTCGAGGCGTCGGCGGCGGAGATACAGGGCCCCGTGGTGTC CGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCCCCGCGCG GCAGCTGTACATGGTGCTCGACACCGGCAGCGACGTCACCTGGGTGCAATGCCAGCCGTG CGCCGACTGCTACCAGCAGTCCGACCCGGTGTTCGACCCTTCCCTCTCCACCTCCTACGC CTCCGTCGCCTGCGACAACCCGCGCTGCCACGACCTCGACGCCGCCGCCTGCCGCAACTC CACCGGCGCCTGCCTCTACGAGGTCGCGTACGGCGACGGCTCCTACACCGTCGGCGACTT CGCCACCGAGACGCTCACGCTCGGCGACTCCGCCCCGGTCTCCAGCGTCGCCATAGGCTG CGGCCACGACAACGAGGGGCTGTTCGTCGGCGCGGCGGGGCTGCTTGCCCTCGGCGGCGG GCCACTCTCCTTCCCGTCCCAGATCTCCGCCACCACCTTCTCCTACTGCCTCGTCGACCG TGACTCCCCCTCCTCGTCAACCCTCCAGTTCGGCGACGCCGCCGACGCGGAGGTGACGGC GCCGCTGATCCGCAGCCCGCGGACGAGCACGTTCTACTACGTGGGCCTCTCGGGCCTCTC CGTCGGTGGCCAGATCCTCTCCATCCCACCCTCGGCGTTCGCCATGGACAGCACGGGCGC CGGCGGCGTCATCGTGGACTCCGGCACGGCGGTGACGCGGCTGCAGTCGTCGGCGTACGC GGCGCTGCGCGACGCGTTCGTCCGGGGCACCCAGTCGCTGCCGCGCACCTCCGGCGTGTC GCTGTTCGACACGTGCTACGACCTGTCGGACCGGACGAGCGTGGAGGTCCCCGCGGTGTC GCTGCGGTTCGCCGGCGGCGGCGAGCTCCGGCTGCCGGCGAAGAACTACCTGATCCCGGT GGACGGCGCGGGGACGTACTGCCTGGCGTTCGCGCCGACGAACGCGGCGGTGTCCATCAT CGGGAACGTGCAGCAGCAGGGGACCCGCGTCAGCTTCGACACGGCCAAGTCCACCGTCGG CTTCACCACCAACAAGTGCTAAGTCATTAGCAGCGATGGCTTAACTTAATTAGCCAGATC AAGGAGTGATTAGTGGTGGTAAATGGTAATTAAGCGCGAGAGTGTGTGATGTGGGGGTGG GGCCCAGTGCCAGGCTCTGTGGGCTTTGGGAGAGACGAAAGGCGAGGACAAATGCCAGCC TGTCCTGCTCTCTGCTTGTCGATGGATGGGGGGGCCCACTCTCTTCTTCTCCGGTGCTTT GCTGTTTCGTCTTTGATGTCTCGGCAAAGACGAATTAAAATGAATCCATTCCAATCTGTT CATGTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12654#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 186
fasta sequence
                              [TCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCTCGCCACGGCGGAGATACAGGGCCCCGTGGTGTCCGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCNCCGCGCGGCANTGTACATGGTGCTCGACAACGGCAGCGACGTCAACTGGG]

[+] EMBL C74447               [TCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCTCGCCACGGCGGAGATACAGGGCCCCGTGGTGTCCGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCNCCGCGCGGCANTGTACATGGTGCTCGACAACGGCAGCGACGTCAACTGGG]


>consensus_12654#1 TCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCTCGCCACGGCG GAGATACAGGGCCCCGTGGTGTCCGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGC GTCGGCGTCGGCAGCNCCGCGCGGCANTGTACATGGTGCTCGACAACGGCAGCGACGTCA ACTGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12654#0      AGCAGCAATGCAGCCTCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGC 60
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CGCCTCGCCACGGCCGGTTCTCTCCCGCCGCCACGCCTCGCCGCCGCTCGCCACCGAGAC 120
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GCTCGACGTCGCCGCGTCGCTGTCCCGGGCGCGGGCCGCGGTATCCGCGGAGGCCGTGCC 180
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GCTCCACCAGTCCGCCGCCGCCGCCGTGTCCACGGAGGTCGTCGGGGAGGAGCACGAGGA 240
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GGGGCGCCTGGCCCTGCGGCTCCACTCCCGGGACTTCTTGCCGGAGGAGCAGGGGCGGCA 300
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GCGGCACGCCAGCTACAGGTCACTCGTGCTGGCTCGCCTCCGCCGCGACTCCGCCCGCGC 360
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CGCCGCGGTGTCGGCCCGCGCGGCGATGGCGGCGGACGGGGTGAGTCGGTTCGACCTGGT 420
consensus_12654#1      ---------------------------------TCCCATCCTCCTCCCGCTTCTCCTCCT 27
                                                           *    *    * * *   ***  *

consensus_12654#0      GCCGGCCAACGTCACGGCGTTCGAGGCGTCGGCGGCGGAGATACAGGGCCCCGTGGTGTC 480
consensus_12654#1      CCTCCTCCTCCTCGCCGC---CGCCTCGCCA-CGGCGGAGATACAGGGCCCCGTGGTGTC 83
                        *    *  * ** * **   **   ** *  ****************************

consensus_12654#0      CGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCCCCGCGCG 540
consensus_12654#1      CGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCNCCGCGCG 143
                       **************************************************** *******

consensus_12654#0      GCAGCTGTACATGGTGCTCGACACCGGCAGCGACGTCACCTGGGTGCAATGCCAGCCGTG 600
consensus_12654#1      GCAN-TGTACATGGTGCTCGACAACGGCAGCGACGTCAACTGGG---------------- 186
                       ***  ****************** ************** *****                

consensus_12654#0      CGCCGACTGCTACCAGCAGTCCGACCCGGTGTTCGACCCTTCCCTCTCCACCTCCTACGC 660
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CTCCGTCGCCTGCGACAACCCGCGCTGCCACGACCTCGACGCCGCCGCCTGCCGCAACTC 720
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CACCGGCGCCTGCCTCTACGAGGTCGCGTACGGCGACGGCTCCTACACCGTCGGCGACTT 780
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CGCCACCGAGACGCTCACGCTCGGCGACTCCGCCCCGGTCTCCAGCGTCGCCATAGGCTG 840
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CGGCCACGACAACGAGGGGCTGTTCGTCGGCGCGGCGGGGCTGCTTGCCCTCGGCGGCGG 900
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GCCACTCTCCTTCCCGTCCCAGATCTCCGCCACCACCTTCTCCTACTGCCTCGTCGACCG 960
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      TGACTCCCCCTCCTCGTCAACCCTCCAGTTCGGCGACGCCGCCGACGCGGAGGTGACGGC 1020
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GCCGCTGATCCGCAGCCCGCGGACGAGCACGTTCTACTACGTGGGCCTCTCGGGCCTCTC 1080
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CGTCGGTGGCCAGATCCTCTCCATCCCACCCTCGGCGTTCGCCATGGACAGCACGGGCGC 1140
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CGGCGGCGTCATCGTGGACTCCGGCACGGCGGTGACGCGGCTGCAGTCGTCGGCGTACGC 1200
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GGCGCTGCGCGACGCGTTCGTCCGGGGCACCCAGTCGCTGCCGCGCACCTCCGGCGTGTC 1260
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GCTGTTCGACACGTGCTACGACCTGTCGGACCGGACGAGCGTGGAGGTCCCCGCGGTGTC 1320
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GCTGCGGTTCGCCGGCGGCGGCGAGCTCCGGCTGCCGGCGAAGAACTACCTGATCCCGGT 1380
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GGACGGCGCGGGGACGTACTGCCTGGCGTTCGCGCCGACGAACGCGGCGGTGTCCATCAT 1440
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CGGGAACGTGCAGCAGCAGGGGACCCGCGTCAGCTTCGACACGGCCAAGTCCACCGTCGG 1500
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CTTCACCACCAACAAGTGCTAAGTCATTAGCAGCGATGGCTTAACTTAATTAGCCAGATC 1560
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      AAGGAGTGATTAGTGGTGGTAAATGGTAATTAAGCGCGAGAGTGTGTGATGTGGGGGTGG 1620
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GGCCCAGTGCCAGGCTCTGTGGGCTTTGGGAGAGACGAAAGGCGAGGACAAATGCCAGCC 1680
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      TGTCCTGCTCTCTGCTTGTCGATGGATGGGGGGGCCCACTCTCTTCTTCTCCGGTGCTTT 1740
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      GCTGTTTCGTCTTTGATGTCTCGGCAAAGACGAATTAAAATGAATCCATTCCAATCTGTT 1800
consensus_12654#1      ------------------------------------------------------------
                                                                                   

consensus_12654#0      CATGTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1842
consensus_12654#1      ------------------------------------------
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)