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Oryza sativa
cluster # 12655 cluster # 12655       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12655#0 length = 1875 sequences # 8  
consensus_12655#1 length = 936 sequences # 3  

consensusID : consensus_12655#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1875
fasta sequence
                              [ACCTCCCGCCTCACCCGCCGCCATTGACGACCACCGCGCTCGTCCCATCCCATGCCTGCGGCCGTGACCGCGAGGTTGTGAGGAGAAGAGAGTCCCAAGAGAGGAGGATCGATGCGGCAGCGGCAGGCCGGCGAGCAGGAGGCGGAGCTGTTCGTCCAGTGGAGGCCCTGCGACAAGAAGCGGTCCTAGTCGCCCGCCGCCGCTCGCCCACTCGCCGGCGTCGTCGATCTGAGAGGGACAGGGGAAGAGGAAGAAGCAGAGGAGGAGGAGGATGAGCGTGTCGGGCGGGAGGACGCGGGTGGGGAGGTACGAGCTCGGGAGGACGCTCGGCGAGGGCACCTTCGCCAAGGTCAAGTTCGCCCGCAACGCGGACTCCGGCGAGAATGTCGCCATCAAGATCCTCGACAAGGACAAGGTCCTCAAGCACAAGATGATCGCCCAGATAAAGCGCGAGATCTCCACCATGAAGCTCATCAGGCACCCCAACGTCATCCGGATGCATGAGGTGATGGCCAGCAAGACCAAAATATACATAGTGATGGAGCTTGTCACCGGTGGTGAACTTTTCGACAAGATTGCTTCGCGTGGGAGGCTGAAAGAGGATGATGCAAGGAAGTATTTTCAGCAGCTGATCAACGCTGTCGATTACTGTCATAGCAGAGGAGTCTATCACCGGGATCTCAAGCCCGAAAATCTTCTGCTTGATGCTAGTGGCACTCTCAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGAGGAT-GGTCTGTTGCACACTACCTGTGGAACTCCTAATTATGTTGCTCCCGAGGTTATCAACAACAAAGGATATGATGGAGCCAAGGCTGATCTGTGGTCATGT-GGAGTGATTCTCTTTGTCCTCATGGCAGGCTACCTTCCATTTGAAGACTCAAACCTCATGTCACTTTACAAG-AAGATCTTCAAAGCAGACTTCAGTTG-CCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGATCCTAATCCTAGCACCAGGATTACCATCGCAGAGCTTATCAACAATGAGTGGTTCAAGAAGGGATATCAGCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCAATCGCAGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGA-GGTTTTTGAAGTCACGCCCTCGCTGTACAT-GGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGAGATCCAGCATCGGAGGTCACCGTGATTGGCAGTTTGGCACCAAAAGTTCAGTGATAGTATAAAGTAGATAACCAGCCAGGAAAACCTACTAAGGAATGGCCTGTGGCTGTTTTTTTTTTTTTTGGTTCTTTTTACCTTTTAAGTTGAGTTACTATCTAATCTAGACATGGTTGTAAACAAAGTTTGTATGGAGATGGAATGTGAATGAAGAATGTGCATAGTTTTGCTTCCTTGACTTATTTTAAAAGCAGTAACCTGTGAAATCCGATGAATGAA]

[+] EMBL AK069726             [ACCTCCCGCCTCACCCGCCGCCATTGACGACCACCGCGCTCGTCCCATCCCATGCCTGCGGCCGTGACCGCGAGGTTGTGAGGAGAAGAGAGTCCCAAGAGAGGAGGATCGATGCGGCAGCGGCAGGCCGGCGAGCAGGAGGCGGAGCTGTTCGTCCAGTGGAGGCCCTGCGACAAGAAGCGGTCCTAGTCGCCCGCCGCCGCTCGCCCACTCGCCGGCGTCGTCGATCTGAGAGGGACAGGGGAAGAGGAAGAAGCAGAGGAGGAGGAGGATGAGCGTGTCGGGCGGGAGGACGCGGGTGGGGAGGTACGAGCTCGGGAGGACGCTCGGCGAGGGCACCTTCGCCAAGGTCAAGTTCGCCCGCAACGCGGACTCCGGCGAGAATGTCGCCATCAAGATCCTCGACAAGGACAAGGTCCTCAAGCACAAGATGATCGCCCAGATAAAGCGCGAGATCTCCACCATGAAGCTCATCAGGCACCCCAACGTCATCCGGATGCATGAGGTGATGGCCAGCAAGACCAAAATATACATAGTGATGGAGCTTGTCACCGGTGGTGAACTTTTCGACAAGATTGCTTCGCGTGGGAGGCTGAAAGAGGATGATGCAAGGAAGTATTTTCCGCAGCTGATCAACGCTGTCGATTACTGTCATAGCAGAGGAGTCTATCACCGGGATCTCAAGCCCGAAAATCTTCTGCTTGATGCTAGTGGCACTCTCAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGAGGAT GGTCTGTTGCACACTACCTGTGGAACTCCTAATTATGTTGCTCCCGAGGTTATCAACAACAAAGGATATGATGGAGCCAAGGCTGATCTGTGGTCATGT GGAGTGATTCTCTTTGTCCTCATGGCAGGCTACCTTCCATTTGAAGACTCAAACCTCATGTCACTTTACAAG AAGATCTTCAAAGCAGACTTCAGTTG CCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGATCCTAATCCTAGCACCAGGATTACCATCGCAGAGCTTATCAACAATGAGTGGTTCAAGAAGGGATATCAGCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCAATCGCAGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGA GGTTTTTGAAGTCACGCCCTCGCTGTACAT GGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGAGATCCAGCATCGGAGGTCACCGTGATTGGCAGTTTGGCACCAAAAGTTCAGTGATAGTATAAGGTAGATAACCAGCCAGGAAAACCTACTAAGGAATGGCCTGTGGCTGTTTTTTTTTTTTTTGGTTCTTTTTACCTTTTAAGTTGAGTTACTATCTAATCTAGACATGGTTGTAAACAAAGTTTGTATGGAGATGGAATGTGAATGAAGAATGTGCATAGTTTTGCTTCCTTGACTTATTTTAAAAGCAGTAACCTGTGAAATCCGATGAATGAA]
[+] EMBL CB656219             [                  CGCCATTGACGACCACCGCGCTCGTCCCATCCCATGCCTGCGGCCGTGACCGCGAGGTTGTGAGGAGAAGAGAGTCCCAAGAGAGGAGGATCGATGCGGCAGCGGCAGGCCGGCGAGCAGGAGGCGGAGCTGTTCGTCCAGTGGAGGCCCTGCGACAAGAAGCGGTCCTAGTCGCCCGCCGCCGCTCGCCCACTCGCCGGCGTCGTCGATCTGAGAGGGACAGGGGAAGAGGAAGAAGCAGAGGAGGAGGAGGATGAGCGTGTCGGGCGGGAGGACGCGGGTGGGGAGGTACGAGCTCGGGAGGACGCTCGGCGAGGGCACCTTCGCCAAGGTCAAGTTCGCCCGCAACGCGGACTCCGGCGAGAATGTCGCCATCAAGATCCTCGACAAGGACAAGGTCCTCAAGCACAAGATGATCGCCCAGATAAAGCGCGAGATCTCCACCATGAAGCTCATCAGGCACCCCAACGTCATCCGGATGCATGAGGTGATGGCCAGCAAGACCAAAATATACATAGTGATGGAGCTTGTCACCGGTGGTGAACTTTTCGACAAGATTGCTTCGCGTGGGAGGCTGAAAGAGGATGATGCAAGGAAGTATTTTCAGCAGCTGATCAACGCTGTCGATTACTGTCATAGCAGAGGAGTCTATCACCGGGATCTCAAGCCCGAAAATCTTCTGCTTGATGCTAGTGGCACTCTCAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGAGGAT GGTCTGTTGCACACTACCTGTGGAACTCCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF311052             [                                                                                                                                                                                                                                                                                                                                                                                        GGCGAGAATGTCGCCATCAAGATCCTCGACAAGGACAAGGTCCTCAAGCACAAGATGATCGCCCAGATAAAGCGCGAGATCTCCACCATGAAGCTCATCAGGCACCCCAACGTCATCCGGATGCATGAGGTGATGGCCAGCAAGACCAAAATATACATAGTGATGGAGCTTGTCACCGGTGGTGAACTTTTCGACAAGATTGCTTCGCGTGGGAGGCTAAAAGAGGATGATGCAAGGAAGTATTTTCAGCAGCTGATCAACGCTGTCGATTACTGTCATAGCAGAGGAGTCTATCACCGGGATCTCAAGCCCGAAAATCTTCTGCTTGATGCTAGTGGCACTCTCAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGAGGATGGGTCTGTTGCACACTACCTGTGGAACTCCTAATTATGTTGCTCCCGAGGTTATCAACAACAAAGGATATGATGGAGCCAAGGCTGATCTGTGGTCATGTGGGAGTGATCCTCTNTGTCCTCATGGCAGGCTACCTTCCATTTGAAGACTCAAACCTCATGTCACTTTACAAGAAAGATCTTCAAAGCAGACTTCAGTTGCCCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C74855               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGGCACTCTCAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGAGGAT GGTCTGTTGCACACTACCTGTGGAACTCCTAATTATGTTGCTCCCGAGGTTATCAACAACAAAGG  ATGATGGAGCCAAGGCTGATCTGTGGTCATGT GGAGTGATTCTCTTTGTCCTCATGGCAGGCTACCTTCCATTTGAAGACTCAAACCTCATGTCACTTTACAAG AAGATCTTCAAAGCAGACTTCAGTTG CCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGATCCTAATCCTAGCACCAGGATTACCATCGCAGAGCTTATCAACna                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF320137             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACTCAAACCTCATGTCACTTTACAAG AAGATCTTCAAAGCAGACTTCAGTTG CCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGATCCTAATCCTAGCACCAGGATTACCATCGCAGAGCTTATCAACAATGAGTGGTTCAAGAAGGGATATCAGCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCAATCGCA GGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACCACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTG AACAGAGGGTTTTTGAAGTCACGCCCTCGCTGTACATGGGTTGAGCTCCGCANATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAA                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB656220             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGGTTCAAGAAGGGATATCAGCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCAATCGCAGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGA GGTTTTTGAAGTCACGCCCTCGCTGTACAT GGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTTTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGAGATCCAGCATCGGAGGTCACCGTGATTGGCAGTTTGGCACCAAAAGTTCAGTGATAGTATAAAGTAGATAACCAGCCAGGAAAACCTACTAAGGAATGGCCTGTGGCTGTTTTTTTTTTTTTTGGTTCTTTTTACCTTTTAAGTTGAGTTACTATCTAATCTAGACATGGTTGTAAACAAAGTTTGTATGGAGATGGAATGTGAATGAAGAATGTGCATAG                                                       ]
[-] EMBL CF320138             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGCAGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACCACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGA GGTTTTTGAAGTCACGCCCTCGCTGTACAT GGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGAGATCCAGCATCGGAGGTCACCGTGATTGGCAGTTTGGCACCAAAAAATAAATGATAGTATAAAGTAGATAACCAGCCAGGAAAACCTACTAAGGAATGGCCTGTGGCTGTTTTTTTTTTTTTTGGTTCTTTTTACCTTTTAAGTTGAGTTACTATCTAATCTAGACATGGTTGTAAACAAAGTTTGTATGGAGATGGAATGTGAATGAAGAATGTGCATAGTTTTGCTTCCTTGACTTAaaaaaaaa                             ]
[-] EMBL CF311053             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGATAGTATAAAGTAGATAACCAGCCAGGAAAACCTACTAAGGAATGGCCTGTGGCTGTTTTTTTTTTTTTTGGTTCTTTTTACCTTTTAAGTTGAGTTACTATCTAATCTAGACATGGTTGTAAACAAAGTTTGTATGGAGAT GAATGT AAT AAGAATGTGCATAG TTTGCTTCaaaaa                                         ]


>consensus_12655#0 ACCTCCCGCCTCACCCGCCGCCATTGACGACCACCGCGCTCGTCCCATCCCATGCCTGCG GCCGTGACCGCGAGGTTGTGAGGAGAAGAGAGTCCCAAGAGAGGAGGATCGATGCGGCAG CGGCAGGCCGGCGAGCAGGAGGCGGAGCTGTTCGTCCAGTGGAGGCCCTGCGACAAGAAG CGGTCCTAGTCGCCCGCCGCCGCTCGCCCACTCGCCGGCGTCGTCGATCTGAGAGGGACA GGGGAAGAGGAAGAAGCAGAGGAGGAGGAGGATGAGCGTGTCGGGCGGGAGGACGCGGGT GGGGAGGTACGAGCTCGGGAGGACGCTCGGCGAGGGCACCTTCGCCAAGGTCAAGTTCGC CCGCAACGCGGACTCCGGCGAGAATGTCGCCATCAAGATCCTCGACAAGGACAAGGTCCT CAAGCACAAGATGATCGCCCAGATAAAGCGCGAGATCTCCACCATGAAGCTCATCAGGCA CCCCAACGTCATCCGGATGCATGAGGTGATGGCCAGCAAGACCAAAATATACATAGTGAT GGAGCTTGTCACCGGTGGTGAACTTTTCGACAAGATTGCTTCGCGTGGGAGGCTGAAAGA GGATGATGCAAGGAAGTATTTTCAGCAGCTGATCAACGCTGTCGATTACTGTCATAGCAG AGGAGTCTATCACCGGGATCTCAAGCCCGAAAATCTTCTGCTTGATGCTAGTGGCACTCT CAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGAGGATGGTCTGTT GCACACTACCTGTGGAACTCCTAATTATGTTGCTCCCGAGGTTATCAACAACAAAGGATA TGATGGAGCCAAGGCTGATCTGTGGTCATGTGGAGTGATTCTCTTTGTCCTCATGGCAGG CTACCTTCCATTTGAAGACTCAAACCTCATGTCACTTTACAAGAAGATCTTCAAAGCAGA CTTCAGTTGCCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGA TCCTAATCCTAGCACCAGGATTACCATCGCAGAGCTTATCAACAATGAGTGGTTCAAGAA GGGATATCAGCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTAT TTTTAATGAATCTGGGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATC AGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTT TGAAAAGCAATCGCAGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGC AAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAA GCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAAT TGCAACAGAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGCTCCGCAAATCTAA CGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGT GATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGAGATCCAGCATCGGAGGTCACC GTGATTGGCAGTTTGGCACCAAAAGTTCAGTGATAGTATAAAGTAGATAACCAGCCAGGA AAACCTACTAAGGAATGGCCTGTGGCTGTTTTTTTTTTTTTTGGTTCTTTTTACCTTTTA AGTTGAGTTACTATCTAATCTAGACATGGTTGTAAACAAAGTTTGTATGGAGATGGAATG TGAATGAAGAATGTGCATAGTTTTGCTTCCTTGACTTATTTTAAAAGCAGTAACCTGTGA AATCCGATGAATGAA



consensusID : consensus_12655#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 936
fasta sequence
                              [CATGTCACCTTTAAGAAGATCTTCAAAGCAGACTTCAGTTGCCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCTAGAAAGTACTAGATCCTAATCCTGGTGCTAGGATTAGGATCTAGTATTTTCTTGATGAGCTTATCAACAATGAGTGGTTCAAGAAGGGATATCATCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGCGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCAATCGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGAGATCCAGCATCGGAGGTCACCGTGATTGGCAGTTTGGCACCAAAAGTTCAGTGATAGTATAAAGTAGATAACCAGCCAGGAAAACCTACTAAGGAATGGCCTGTGGCTGTTTTTTTTTTTTTGGTTCTTTTTACCTTTTAAGTTGAGTTACTATCTAATCTAGACATGGTTGTAAACAAAGTTTGTATGGAGATGGAATGTGAATGAAGAATGTGCATAGTTTTGCTTCCTTGCCTTAAAAAAAAAAAAAAAAGA]

[+] EMBL CB669628             [CATGTCACCTTTAAGAAGATCTTCAAAGCAGACTTCAGTTGCCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCTAGAAAGTACTAGATCCTAATCCTGGTGCTAGGATTAGGATCTAGTATTTTCTTGATGAGCTTATCAACAATGAGTGGTTCAAGAAGGGATATCATCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGCGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCAATCGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGAGATCCAGCATCGGAGGTCACCGTGATTGGCAGTTTGGCACCAAAAGTTCAGTGATAGTATAAAGTAGATAACCAGCCAGGAAAACCTACTAAGGAATGGCCTGTGGCTGTT                                                                                                                                                ]
[-] EMBL CB669629             [                                                                                                                                                                                                       TTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGG GGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCAATCGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTTTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGAGATCCAGCATCGGAGGTCACCGTGATTGGCAGTTTGGCACCAAAAGTTCAGTGATAGTATAAAGTAGATAACCAGCCAGGAAAACCTACTAAGGAATGGCCTGTGGCTGTTTTTTTTTTTTTGGTTCTTTTTACCTTTTAAGTTGAGTTACTATCTAATCTAGACATGGTTGTAAACAAAGTTTGTATGGAGATGGAATGTGAATGAAGAATGTGCATAGTTTTGCTTCCTTGCCTTAAAAAAAAAAAAAAAAGA]
[+] EMBL CA998121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACAGAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGA                                                                                                                                                                                                                                                               ]


>consensus_12655#1 CATGTCACCTTTAAGAAGATCTTCAAAGCAGACTTCAGTTGCCCGTCTTGGTTCTCTACA AGTGCGAAGAAGCTCATCTAGAAAGTACTAGATCCTAATCCTGGTGCTAGGATTAGGATC TAGTATTTTCTTGATGAGCTTATCAACAATGAGTGGTTCAAGAAGGGATATCATCCTCCA AGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGC GGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTT TGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCAATCGGG TTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAA AATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGCTGAA GTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGAGGTTTTTGA AGTCACGCCCTCGCTGTACATGGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATT CCATAAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAG TAGCATAATCGCAGGCGATGAGATCCAGCATCGGAGGTCACCGTGATTGGCAGTTTGGCA CCAAAAGTTCAGTGATAGTATAAAGTAGATAACCAGCCAGGAAAACCTACTAAGGAATGG CCTGTGGCTGTTTTTTTTTTTTTGGTTCTTTTTACCTTTTAAGTTGAGTTACTATCTAAT CTAGACATGGTTGTAAACAAAGTTTGTATGGAGATGGAATGTGAATGAAGAATGTGCATA GTTTTGCTTCCTTGCCTTAAAAAAAAAAAAAAAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12655#0      ACCTCCCGCCTCACCCGCCGCCATTGACGACCACCGCGCTCGTCCCATCCCATGCCTGCG 60
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      GCCGTGACCGCGAGGTTGTGAGGAGAAGAGAGTCCCAAGAGAGGAGGATCGATGCGGCAG 120
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      CGGCAGGCCGGCGAGCAGGAGGCGGAGCTGTTCGTCCAGTGGAGGCCCTGCGACAAGAAG 180
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      CGGTCCTAGTCGCCCGCCGCCGCTCGCCCACTCGCCGGCGTCGTCGATCTGAGAGGGACA 240
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      GGGGAAGAGGAAGAAGCAGAGGAGGAGGAGGATGAGCGTGTCGGGCGGGAGGACGCGGGT 300
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      GGGGAGGTACGAGCTCGGGAGGACGCTCGGCGAGGGCACCTTCGCCAAGGTCAAGTTCGC 360
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      CCGCAACGCGGACTCCGGCGAGAATGTCGCCATCAAGATCCTCGACAAGGACAAGGTCCT 420
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      CAAGCACAAGATGATCGCCCAGATAAAGCGCGAGATCTCCACCATGAAGCTCATCAGGCA 480
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      CCCCAACGTCATCCGGATGCATGAGGTGATGGCCAGCAAGACCAAAATATACATAGTGAT 540
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      GGAGCTTGTCACCGGTGGTGAACTTTTCGACAAGATTGCTTCGCGTGGGAGGCTGAAAGA 600
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      GGATGATGCAAGGAAGTATTTTCAGCAGCTGATCAACGCTGTCGATTACTGTCATAGCAG 660
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      AGGAGTCTATCACCGGGATCTCAAGCCCGAAAATCTTCTGCTTGATGCTAGTGGCACTCT 720
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      CAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGAGGATGGTCTGTT 780
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      GCACACTACCTGTGGAACTCCTAATTATGTTGCTCCCGAGGTTATCAACAACAAAGGATA 840
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      TGATGGAGCCAAGGCTGATCTGTGGTCATGTGGAGTGATTCTCTTTGTCCTCATGGCAGG 900
consensus_12655#1      ------------------------------------------------------------
                                                                                   

consensus_12655#0      CTACCTTCCATTTGAAGACTCAAACCTCATGTCACTTTACAAGAAGATCTTCAAAGCAGA 960
consensus_12655#1      ---------------------------CATGTCACCTT-TAAGAAGATCTTCAAAGCAGA 32
                                                  ******** **  ********************

consensus_12655#0      CTTCAGTTGCCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGA 1020
consensus_12655#1      CTTCAGTTGCCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCTAGAAAGTACTAGA 92
                       ********************************************** ***** *******

consensus_12655#0      TCCTAATCCTAGCACCAGGATTACCATC------------GCAGAGCTTATCAACAATGA 1068
consensus_12655#1      TCCTAATCCTGGTGCTAGGATTAGGATCTAGTATTTTCTTGATGAGCTTATCAACAATGA 152
                       ********** *  * *******  ***            *  *****************

consensus_12655#0      GTGGTTCAAGAAGGGATATCAGCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGA 1128
consensus_12655#1      GTGGTTCAAGAAGGGATATCATCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGA 212
                       ********************* **************************************

consensus_12655#0      TATCAACTCTATTTTTAATGAATCTGG-GGACCAAACACAGCTTGTTGTCGAGAGGCGAG 1187
consensus_12655#1      TATCAACTCTATTTTTAATGAATCTGGCGGACCAAACACAGCTTGTTGTCGAGAGGCGAG 272
                       *************************** ********************************

consensus_12655#0      AAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATC 1247
consensus_12655#1      AAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATC 332
                       ************************************************************

consensus_12655#0      TTGGCACACTCTTTGAAAAGCAATCGCAGGGTTCTGTGAAGCGAGAAACAAGATTTGCAT 1307
consensus_12655#1      TTGGCACACTCTTTGAAAAGCAATCG---GGTTCTGTGAAGCGAGAAACAAGATTTGCAT 389
                       **************************   *******************************

consensus_12655#0      CAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCT 1367
consensus_12655#1      CAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCT 449
                       ************************************************************

consensus_12655#0      TTAATGTACAGAAGCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAG 1427
consensus_12655#1      TTAATGTACAGAAGCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAG 509
                       ************************************************************

consensus_12655#0      GTCAGCTTGCAATTGCAACAGAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGC 1487
consensus_12655#1      GTCAGCTTGCAATTGCAACAGAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGC 569
                       ************************************************************

consensus_12655#0      TCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATG 1547
consensus_12655#1      TCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATG 629
                       ************************************************************

consensus_12655#0      GCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGAGATCCAGC 1607
consensus_12655#1      GCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGCAGGCGATGAGATCCAGC 689
                       ************************************************************

consensus_12655#0      ATCGGAGGTCACCGTGATTGGCAGTTTGGCACCAAAAGTTCAGTGATAGTATAAAGTAGA 1667
consensus_12655#1      ATCGGAGGTCACCGTGATTGGCAGTTTGGCACCAAAAGTTCAGTGATAGTATAAAGTAGA 749
                       ************************************************************

consensus_12655#0      TAACCAGCCAGGAAAACCTACTAAGGAATGGCCTGTGGCTGTTTTTTTTTTTTTTGGTTC 1727
consensus_12655#1      TAACCAGCCAGGAAAACCTACTAAGGAATGGCCTGTGGCTGTTTTTTTTTTTTT-GGTTC 808
                       ****************************************************** *****

consensus_12655#0      TTTTTACCTTTTAAGTTGAGTTACTATCTAATCTAGACATGGTTGTAAACAAAGTTTGTA 1787
consensus_12655#1      TTTTTACCTTTTAAGTTGAGTTACTATCTAATCTAGACATGGTTGTAAACAAAGTTTGTA 868
                       ************************************************************

consensus_12655#0      TGGAGATGGAATGTGAATGAAGAATGTGCATAGTTTTGCTTCCTTGACTTATTTTAAAAG 1847
consensus_12655#1      TGGAGATGGAATGTGAATGAAGAATGTGCATAGTTTTGCTTCCTTGCCTTAAAAAAAAAA 928
                       ********************************************** ****    **** 

consensus_12655#0      CAGTAACCTGTGAAATCCGATGAATGAA 1875
consensus_12655#1      AAAAAAGA-------------------- 936
                        *  **                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)