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Oryza sativa
cluster # 12656 cluster # 12656       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12656#0 length = 1298 sequences # 9  
consensus_12656#1 length = 555 sequences # 1  
consensus_12656#2 length = 178 sequences # 1  

consensusID : consensus_12656#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1298
fasta sequence
                              [GCACTGGTGCACTCACCAAATCAACAAGCTAGCTAACTAAGCTTACCACACTCACATACTCCTATATATTTTGGCACGCATTGATTACCTGCTAGCTCCTTGAGCAATATCAATATGGCTCAGCCGACTTGGTCAGCAAGGCGCGTCACTGCCGCCCTGGTCGTGATGGTGGTGGTGGTGCTCGCGGTCGCCGGCGGGTCGTGGGCGCA-CTG-TCGCCGAGCTTCTACTCGTACTCGTGCCCGGGAGTGTTCAACGCGGTGAAGCGGGGGATGCAGTCGGCCATCGCCAGGGAGAAGCGCATCGGCGCCTCCATCGTCCGCCTCTTC-TTCCACGACTGCTTCGTCCAAGGTTGCGACGCATCGC-TGCTGCTGGACGACACGGCGAGCTTCACCGGCGAGAAGA-CGGCGAACCCCAACAACGGCTCCGTCAGA-GGGTTTGAGGTGATCGACGCCATCAA-GTCGGCGGTGGAGACCATCTGCCCCGGCGTCGTCTCCTGCGCCGACATCCTCGCCATCGCTGCCAGGGACAGCGTCGCCATCCTGGGTGGGCCGAGCT-GGACGTGAAGGTTG-GT-CGGAGATAC-TCGCGCACGGCGAGCCTCAGCGGCGCAAACAACAACATCCCGCCGCCGACGTCGGGACTCGCCAACCTCACCTCCCTCTTCGCCGCGCAGGCCCTCTCCCAGAAGGACATGGTCGCCCTCTCCGGATCTCACACCATTGGGCAAGCACGATGCACAAACTTCAGAGCTCATATATACAACGAAACCAACATCGACAGTGGCTTTGCGATGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACCTGGCACCTCTGGATC-TTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCGTCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATGCTCTTGTTCAGTCTTACATAAGTAGCCAGAG-CACATTCTTTGCGGATTTTGTGACGGGCATGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTGCAGAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCATGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTGATTTGTTTTAAAAAAAAATATGCTTAGTTTATGTGGTGGTAAATGATCGG]

[+] EMBL AK069456             [GCACTGGTGCACTCACCAAATCAACAAGCTAGCTAACTAAGCTTACCACACTCACATACTCCTATATATTTTGGCACGCATTGATTACCTGCTAGCTCCTTGAGCAATATCAATATGGCTCAGCCGACTTGGTCAGCAAGGCGCGTCACTGCCGCCCTGGTCGTGATGGTGGTGGTGGTGCTCGCGGTCGCCGGCGGGTCGTGGGCGCAGCTG TCGCCGAGCTTCTACTCGTACTCGTGCCCGGGAGTGTTCAACGCGGTGAAGCGGGGGATGCAGTCGGCCATCGCCAGGGAGAAGCGCATCGGCGCCTCCATCGTCCGCCTCTTC TTCCACGACTGCTTCGTCCAAGGTTGCGACGCATCGC TGCTGCTGGACGACACGGCGAGCTTCACCGGCGAGAAGA CGGCGAACCCCAACAACGGCTCCGTCAGA GGGTTTGAGGTGATCGACGCCATCAA GTCGGCGGTGGAGACCATCTGCCCCGGCGTCGTCTCCTGCGCCGACATCCTCGCCATCGCTGCCAGGGACAGCGTCGCCATCCTGGGTGGGCCGAGCTGGGACGTGAAGGTTG GT CGGAGAGAC TCGCGCACGGCGAGCCTCAGCGGCGCAAACAACAACATCCCGCCGCCGACGTCGGGACTCGCCAACCTCACCTCCCTCTTCGCCGCGCAGGCCCTCTCCCAGAAGGACATGGTCGCCCTCTCCGGATCTCACACCATTGGGCAAGCACGATGCACAAACTTCAGAGCTCATATATACAACGAAACCAACATCGACAGTGGCTTTGCGATGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACCTGGCACCTCTGGATC TTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCGTCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATGCTCTTGTTCAGTCTTACATAAGTAGCCAGAG CACATTCTTTGCGGATTTTGTGACGGGCATGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTGCAGAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCATGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTGATTTGTTTTAATGTAACATATGCTTAGTTTATGTGGTGGTAAATGATCGG]
[+] EMBL OSR3025A             [                                                                                                              CAATATGGNTCAGCCGACTTGGTCAGCAAGGNGCGTNACTGCCGCCCTGGTCGTGATGGTGGTGGTGGTGCTCGCGGTCGCCGGCGGGTCGTGGGCGCA CTGTTCGCCGAGCTTCTACTCGTACTCGTGCCCGGGAGTGTTCAACGCGGTGAAGCGGGGGATGCAGTCGGCCATCGCCAGGGAGAAGCGCATCGGCGCCTCCATCGTCCGCCTCTTCTTTCCACGACTGCTTCGTNCAAGGTTGCGACGCATCGCTTGCTGCTGGACGACACGGCGAGCTTCACCGGCGAGAAGANGGGNGAACCCCAACANCGGCTNCNTCAGAGGGGTTTAAGGTGATCGACGGCATCAANTTCGGCGntn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL C22706               [                                                                                                                    GGCTCAGCCGACTTGGTCAGCAAGGCGCGTCACTGCCGCCCTGGTCGTNATGGTGGTGGTGGTGCTCGCGGTCGCCGGCGGGTCGTGGGCGCA NTG TCGCCGAGCTTCTACTCGTACTCGTGCCCGGNAGTNTTCAACGCGGTGAAGCGGGGGATGCAGTCGGCCATCGCCAGGGAGAAGCGCATCGGCGCCTCCATCGTCCGCCTCTTC TTCCACGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB966404             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ttCCCTTCT GGTGGGCCGACCT GGACGTTAA GTTGTTT CGG GATAC TCGCGCAC GCGAGCCTCAGCGGCGCAAACAACAACATCCCGCCGCCGACGTCGGGACTCGCCAACCTCACCTCCCTCTTCGCCGCGCAGGGCCTCTCCCAGAAGGACATGGTCGCCCTCTCCGGATCTCACACCATTGGGCAAGCACGATGCACAAACTTCAGAGCTCATATATACTACGAAACCAACATCGACAGTGGCTTTGCGATGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACCTGGCACCTCTGGATC TTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCGTCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATGCTCTTGTTCAGTCTTACATAAGTAGCCCGAGCCACATTCTTTGCGGATTTTGTGACGGGCATGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTGCAGAAGGATTAATTAAGAAGTGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCATGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTGATTTGTTT                                          ]
[-] EMBL BU673475             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             gCAT CTGGGGTGGCCGATCT GGACTTGAAGGTTT GTCCGGAGATACTTCTCGCTCTGCGAGCCTCATCGGCGCTAACTACAACATCCCGCCGCCGACGTCGGGACTCGCCAACCTCACCTCCCTCTTCGCCGCTCAGGCCTTCTCCCAGAAGGACATGTTCGCCCTCTCCGGATCTCACACCATTGGGCAAGCACGATGCACAAACTTCAGAGCTCATATATACAACGAAACCAACATCGACAGTGGCTTTGCGATGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACCTGGCACCTCTGGATC TTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCGTCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATGCTCTTGTTCAGTCTTACATAAGTAGCCAGAG CACATTCTTTGCGGATTTTGTGACGGGCATGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTGCAGAAGGATTAATTAAGAAGTGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCATGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTGATTTGTTT                                          ]
[+] EMBL CF315034             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACCTGGCACCTCTGGATC TTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCGTCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATGCTCTTGTTCAGTCTTACATAAGTAGCCAGAG CACATTCTTTGCGGATTTTGTGACGGGCATGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTGCAGAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATT                                                                                                          ]
[+] EMBL AU031983             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGATCAGGTGACAATNACCTGGCACCTCTGGATCTTTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCNTCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATGCTCTTGTTCAGTCTTACATAAGTAGCCAGAG CACATTCTTTGCGGATTTTGTGACGGGCATGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTGCAGAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCATGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTGATTTGTTTTAAAAAAA                                  ]
[+] EMBL C19120               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGGTGACAATAACCTGGCACCTCTGGATC TTCAGACGCCAACCGTGTTCNAGAACAACTACTACAAGAACCTCGTCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGNCGGAGCCACTGATGCTCTTGTTCAGTCTTACATAAGTAGCCAGAG CACATTCTTTGCGGATTTTGTGACGGGCATGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTGCAGAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACGCACATTGTGNCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCATGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTGATTTGTTTTAAAAAAAA                                 ]
[-] EMBL CF315035             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAGGGGATCAAACGGGGAGATCAGGAAGACCTGCAGAAGGATTAATTAATAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCATGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTGATTTGTTTTAAAAAAAAA                                ]


>consensus_12656#0 GCACTGGTGCACTCACCAAATCAACAAGCTAGCTAACTAAGCTTACCACACTCACATACT CCTATATATTTTGGCACGCATTGATTACCTGCTAGCTCCTTGAGCAATATCAATATGGCT CAGCCGACTTGGTCAGCAAGGCGCGTCACTGCCGCCCTGGTCGTGATGGTGGTGGTGGTG CTCGCGGTCGCCGGCGGGTCGTGGGCGCACTGTCGCCGAGCTTCTACTCGTACTCGTGCC CGGGAGTGTTCAACGCGGTGAAGCGGGGGATGCAGTCGGCCATCGCCAGGGAGAAGCGCA TCGGCGCCTCCATCGTCCGCCTCTTCTTCCACGACTGCTTCGTCCAAGGTTGCGACGCAT CGCTGCTGCTGGACGACACGGCGAGCTTCACCGGCGAGAAGACGGCGAACCCCAACAACG GCTCCGTCAGAGGGTTTGAGGTGATCGACGCCATCAAGTCGGCGGTGGAGACCATCTGCC CCGGCGTCGTCTCCTGCGCCGACATCCTCGCCATCGCTGCCAGGGACAGCGTCGCCATCC TGGGTGGGCCGAGCTGGACGTGAAGGTTGGTCGGAGATACTCGCGCACGGCGAGCCTCAG CGGCGCAAACAACAACATCCCGCCGCCGACGTCGGGACTCGCCAACCTCACCTCCCTCTT CGCCGCGCAGGCCCTCTCCCAGAAGGACATGGTCGCCCTCTCCGGATCTCACACCATTGG GCAAGCACGATGCACAAACTTCAGAGCTCATATATACAACGAAACCAACATCGACAGTGG CTTTGCGATGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACCT GGCACCTCTGGATCTTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCGT CGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATGC TCTTGTTCAGTCTTACATAAGTAGCCAGAGCACATTCTTTGCGGATTTTGTGACGGGCAT GATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTG CAGAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAA CGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCAT GTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTGATTTGTTTTAAA AAAAAATATGCTTAGTTTATGTGGTGGTAAATGATCGG



consensusID : consensus_12656#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 555
fasta sequence
                              [AGCGCGATGCACAAACTTCAGAGCTCATATATACAACGAAAACCAACATCGACAGTGGCTTTGCGATGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACCTGGCACCTCTGGATCTTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCGTCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATGCTCTTGTTCAGTCCTACATAAGTAGCCAGAGCACATTCTTTGCGGATTTTGTGACGGGCATGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTGCAGAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCATGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTATTGTTTTAAAAAAAAAAAAAAAAAACACT]

[-] EMBL CF308532             [AGCGCGATGCACAAACTTCAGAGCTCATATATACAACGAAAACCAACATCGACAGTGGCTTTGCGATGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACCTGGCACCTCTGGATCTTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCGTCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATGCTCTTGTTCAGTCCTACATAAGTAGCCAGAGCACATTCTTTGCGGATTTTGTGACGGGCATGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTGCAGAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCATGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTATTGTTTTAAAAAAAAAAAAAAAAAACACT]


>consensus_12656#1 AGCGCGATGCACAAACTTCAGAGCTCATATATACAACGAAAACCAACATCGACAGTGGCT TTGCGATGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACCTGG CACCTCTGGATCTTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCGTCG TCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATGCTC TTGTTCAGTCCTACATAAGTAGCCAGAGCACATTCTTTGCGGATTTTGTGACGGGCATGA TCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACTGCA GAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAAACG CACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCATGT GTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTATTGTTTTAAAAAAA AAAAAAAAAAACACT



consensusID : consensus_12656#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 178
fasta sequence
                              [TGGACTGAAGGAGTAGAAAAGCTCCTTGAGCAATATCAATATGGCTCAGCCGACTTGGTCAGCAAGGCGCGTCACTGCCGCCCTGGTCGTGATGGTGGTGGTGGTGCTCGCGGTCGCCGGCGGGTCGTGGGCGCAGCTGTCGCCGAGCTTCTACTCGTACTCGTGCCCGGGAGTGTTC]

[+] EMBL CF308531             [TGGACTGAAGGAGTAGAAAAGCTCCTTGAGCAATATCAATATGGCTCAGCCGACTTGGTCAGCAAGGCGCGTCACTGCCGCCCTGGTCGTGATGGTGGTGGTGGTGCTCGCGGTCGCCGGCGGGTCGTGGGCGCAGCTGTCGCCGAGCTTCTACTCGTACTCGTGCCCGGGAGTGTTC]


>consensus_12656#2 TGGACTGAAGGAGTAGAAAAGCTCCTTGAGCAATATCAATATGGCTCAGCCGACTTGGTC AGCAAGGCGCGTCACTGCCGCCCTGGTCGTGATGGTGGTGGTGGTGCTCGCGGTCGCCGG CGGGTCGTGGGCGCAGCTGTCGCCGAGCTTCTACTCGTACTCGTGCCCGGGAGTGTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12656#0      GCACTGGTGCACTCACCAAATCAACAAGCTAGCTAACTAAGCTTACCACACTCACATACT 60
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      CCTATATATTTTGGCACGCATTGATTACCTGCTAGCTCCTTGAGCAATATCAATATGGCT 120
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      CAGCCGACTTGGTCAGCAAGGCGCGTCACTGCCGCCCTGGTCGTGATGGTGGTGGTGGTG 180
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      CTCGCGGTCGCCGGCGGGTCGTGGGCGCACTGTCGCCGAGCTTCTACTCGTACTCGTGCC 240
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      CGGGAGTGTTCAACGCGGTGAAGCGGGGGATGCAGTCGGCCATCGCCAGGGAGAAGCGCA 300
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      TCGGCGCCTCCATCGTCCGCCTCTTCTTCCACGACTGCTTCGTCCAAGGTTGCGACGCAT 360
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      CGCTGCTGCTGGACGACACGGCGAGCTTCACCGGCGAGAAGACGGCGAACCCCAACAACG 420
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      GCTCCGTCAGAGGGTTTGAGGTGATCGACGCCATCAAGTCGGCGGTGGAGACCATCTGCC 480
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      CCGGCGTCGTCTCCTGCGCCGACATCCTCGCCATCGCTGCCAGGGACAGCGTCGCCATCC 540
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      TGGGTGGGCCGAGCTGGACGTGAAGGTTGGTCGGAGATACTCGCGCACGGCGAGCCTCAG 600
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      CGGCGCAAACAACAACATCCCGCCGCCGACGTCGGGACTCGCCAACCTCACCTCCCTCTT 660
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      CGCCGCGCAGGCCCTCTCCCAGAAGGACATGGTCGCCCTCTCCGGATCTCACACCATTGG 720
consensus_12656#1      ------------------------------------------------------------
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      GCAAGCACGATGCACAAACTTCAGAGCTCATATATACAACGAAA-CCAACATCGACAGTG 779
consensus_12656#1      ---AGCGCGATGCACAAACTTCAGAGCTCATATATACAACGAAAACCAACATCGACAGTG 57
consensus_12656#2      -----TGGACTGAAGGAGTAGAAAAGCTCCT-TGAGCAATATCAATATGGCTCAGC--CG 52
                                 ** *  *     * ***** * *   ***    *       **  *   *

consensus_12656#0      GCTTTGCGATGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACC 839
consensus_12656#1      GCTTTGCGATGAGGAGGCAATCAGGTTGCCCTCGTAACTCAGGATCAGGTGACAATAACC 117
consensus_12656#2      ACTTGGTCAGCAAGGCGCGTCACTGCCGCCCTGGTCGTGATGGTGGTGGTGGTGCTCGCG 112
                        *** *  *  * *  **      *  ***** **      **    ****    *  * 

consensus_12656#0      TGGCACCTCTGGATCTTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCG 899
consensus_12656#1      TGGCACCTCTGGATCTTCAGACGCCAACCGTGTTCGAGAACAACTACTACAAGAACCTCG 177
consensus_12656#2      -GTCGCCGGCGGGTCGT-GGGCGC-AGCTGTCGCCGAG-----CTTCTACTCGTAC-TCG 163
                        * * **   ** ** *  * *** * * **   ****     ** ****  * ** ***

consensus_12656#0      TCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATG 959
consensus_12656#1      TCGTCAAGAAGGGGCTCCTGCATTCTGATCAGGAGCTCTTCAATGGCGGAGCCACTGATG 237
consensus_12656#2      TGCCCGGGAGTGTTC--------------------------------------------- 178
                       *   *  **  *  *                                             

consensus_12656#0      CTCTTGTTCAGTCTTACATAAGTAGCCAGAGCACATTCTTTGCGGATTTTGTGACGGGCA 1019
consensus_12656#1      CTCTTGTTCAGTCCTACATAAGTAGCCAGAGCACATTCTTTGCGGATTTTGTGACGGGCA 297
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      TGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACT 1079
consensus_12656#1      TGATCAAGATGGGGGACATCACACCGTTGACGGGATCAAACGGGGAGATCAGGAAGAACT 357
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      GCAGAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAA 1139
consensus_12656#1      GCAGAAGGATTAATTAAGAAATGATTAAGAGGCAAGCTGTGTTCATGTCCAGTAGTGCAA 417
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      ACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCA 1199
consensus_12656#1      ACGCACATTGTGTCGTGTTTCTTGCGGATATGTTTGCAACATCTCCCTTAATTTCTTTCA 477
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      TGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTGATTTGTTTTAA 1259
consensus_12656#1      TGTGTTTATGTATCATTATGTTCGTTTGAAATAATGAAAGTACTATGTA--TTGTTTTAA 535
consensus_12656#2      ------------------------------------------------------------
                                                                                   

consensus_12656#0      AAAAAAATATGCTTAGTTTATGTGGTGGTAAATGATCGG 1298
consensus_12656#1      AAAAAAAAAAAAAAAACACT------------------- 555
consensus_12656#2      ---------------------------------------
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)