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Oryza sativa
cluster # 12662 cluster # 12662       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12662#0 length = 1181 sequences # 8  
consensus_12662#1 length = 648 sequences # 1  
consensus_12662#2 length = 430 sequences # 1  
consensus_12662#3 length = 186 sequences # 1  

consensusID : consensus_12662#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1181
fasta sequence
                              [AGAGGAGCAGTTTGAAGAAGTGTCATTTGACAGATGCTTCTATATTTATGGAGGACCTGATCAATTAGAGGAGTTGGAGGCACTGTCAAGCCATTATGCACTATTATTTAATAGGAAGAAGGGTAAACTTGTTGCTGGGCAGAAAACATATTATGATGGAAAGCTCAAAGAAATACAACAGATTTTTAGTCTTAGCACCAAGATTGATGAAGATGGACCAGACTCTAACAAAGGAAAAAAGATTGAAGCAGCTGATTCTGATTCTGATGCAGAGATGAAGAAGTTATGCGACTCAAGTGTTAGCAAGGCTGCAAAAATGGCTGCAGGGTTCACCACTGCCTTGGGCGGGCTCTCTCCAAATGAGATTGTCAAACGGACCACTAATAGGCTAGAGACTATTCACTCGGAGGGTGTTCACAGATTGTCAGAAATGTGTTGCCTTGCAGTCTCTCAACTTCTGCTGCTTGGAAAATCTGTTATTTCGGCTTCTTCTAAACCAAAGAATGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTATTTCAAAGGCTAAAATCATCAGATGGAAAGCACAGTCCATCTCCGTGGATATTGAAAAGGTGTCTGCAAGTTTTG-CTACAGGAATATCCGATGTTGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACCAGTGCTGTCAGCAAG-TTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAGTGTAT-AACTCTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGCAGTCCTTCA-GGATTGCCATTATTAGGGCTTCTAGATATCA-AACTACACTAGGGTGTTGTGTCTCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGCTGT-GCCTTATTTGTATTGTTTGGGTACATTACAGATTGTTGCTCTCTATGTTTTTCCTGAGAATAATGAGAATTACTGATGCTTAATACGGAAAAAAAGTATGGCCTTCTCTCACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU184136             [AGAGGAGCAGTTTGAAGAAGTGTCATTTGACAGATGCTTCTATATTTATGGAGGACCTGATCAATTAGAGGAGTTGGAGGCACTGTCAAGCCATTATGCACTATTATTTAATAGGAAGAAGGGTAAACTTGTTGCTGGGCAGAAAACATATTATGATGGAAAGCTCAAAGAAATACAACAGATTTTTAGTCTTAGCACCAAGATTGATGAAGATGGACCAGACTCTAACAAAGGAAAAAAGATTGAAGCAGCTGATTCTGATTCTGATGCAGAGATGAAGAAGTTATGCGACTCAAGTGTTAGCAAGGCTGCAAAAATGGCTGCAGGGTTCACCACTGCCTTGGGCGGGCTCTCTCCAAATGAGATTGTCAAACGGACCACTAATAGGCTAGAGACTATTCACTCGGAGGGTGTTCACAGATTGTCAGAAATGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB097191             [                     GTCATTTGACAGATGCTTCTATATTTATGGAGGACCTGATCAATTAGAGGAGTTGGAGGCACTGTCAAGCCATTATGCACTATTATTTAATAGGAAGAAGGGTAAACTTGTTGCTGAGCAGAAAACATATTATGATGGAAAGCTCAAAGAAATACAACAGATTTTTAGTCTTAGCACCAAGATTGATGAAGATGGACCAGACTCTAACAAAGGAAAAAAGATTGAAGCAGCTGATTCTGATTCTGATGCAGAGATGAAGAAGTTATGCGACTCAAGTGTTAGCAAGGCTGCAAAAATGGCTGCAGGGTTCACCACTGCCTTGGGCGGGCTCTCTCCAAATGAGATTGTCAAACGGACCACTAATAGGCTAGAGACTATTCACTCGGAGGGTGTTCACAGATTGTCAGAAATGTGTTGCCTTGCAGTCTCTCAACTTCTGCTGCTTGGAAAATCTGTTATTTCGGCTTCTTCTAAACCAAAGAATGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTATTTCAAAGGCTAAAATCATCAGATGGAAAGCACAGTCCATCTCCGTGGATATTGAAAAGGTGTCTGCAAGTTTTG CTACAGGAATATCCGATGTTGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAANTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACCAGTGCTGTCAGCAAG TTGCAAGACGCCCTNC ATACTTGGCCTATGGTGGTGGTTGCTCTTCANGGCC AGNGGAT  ACTCTGCAGTT CATATCTCTACCCTGCT                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA999295             [                                      TCTATATTTATGGAGGACCTGATCAATTAGAGGAGTTGGAGGCACTGTCAAGCCATTATGCACTATTATTTAATAGGAAGAAGGGTAAACTTGTTGCTGGGCAGAAAACATATTATGATGGAAAGCTCAAAGAAATACAACAGATTTTTAGTCTTAGCACCAAGATTGATGAAGATGGACCAGACTCTAACAAAGGAAAAAAGATTGAAGCAGCTGATTCTGATTCTGATGCAGAGATGAAGAAGTTATGCGACTCAAGTGTTAGCAAGGCTGCAAAAATGGCTGCAGGGTTCACCACTGCCTTGGGCGGGCTCTCTCCAAATGAGATTGTCAAACGGACCACTAATAGGCTAGAGACTATTCACTCGGAGGGTGTTCACAGATTGTCAGAAATGTGTTGCCTTGCAGTCTCTCAACTTCTGCTGCTTGGAAAATCTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA766171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATTGAATGGCCTGAAGATCCTATTTCAAAGGCTAAAAT NTCNGATGGAAAGCACAGTCCATCTCCGTGGATATTGAAAAGGTGTCTGCAAGTTTTG CTACAGGAATACCCGATGTTGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACCAGTGCTGTCAGCAAG TTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAGTGTAT AACTCTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGCAGTCCTTCA GGATTGCCATTATTAGGGCTTCTAGATATCA AACTACACTAGGGTGTTGTGTCTCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGCTGT GCCTTATTTGTATTGTTTGGGTACATTACAGATTGGTGCTCTCTATGTTTTTCCTGAGAATAATGAGAATTACTGATGCTT                                                                     ]
[+] EMBL BM420930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGAAAGCACAGTCCATCTCCGTGGATATTGAAAAGGTGTCTGCAAGTTTTGTCTACAGGAATATCCGATGTTGCTGAAGCTTACATGGCAGCTATACCAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCCAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACCAGTGCTGTCAGCAAG TTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAGTGTAT AACTCTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGCAGTCCTTCA GGATTGCCATTATTAGGGCTTCTAGATATCA AACTACACTAGGGTGTTGTGTCTCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGCTGT GCCTTATTTGTATTGTTTGGGTACATTACAGATTGTTGCTCTCTATGTTTTTCCTGAGAATAATGAGAATTACTGATGCTTAATACGGAAAAA                                                         ]
[+] EMBL AU184137             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACCAGTGCTGTCAGCAAG TTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAATGTAT AACTCTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGCAGTCCTTCA GGATTGCCATTATTAGGGCTTCTAGATATCA AACTACACTAGGGTGTTGTGTCTCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGTTGT GCCTTATTTGTATTGTTTGGGTACATTACAGATTGTTGCTCTCTATGTTTTTCCTGAGAACAATGAGAATTACTGATGCTTAATA   AAAAAAA                                                       ]
[+] EMBL BI799808             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCAGTGCTGTCAGCAAGCTTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAGTGTATCAACTCTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGCAGTCCTTCACGGATTGCCATTATTAGGGCTTCTAGATATCACAACTACACTAGGGTGTTGTGTCTCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGCTGTCGCCTTATTTGTATTGTTTGGGTAC TTACAGATTGTTGCTCTCTATGTTTTTCCTGAGAATAATGAGAATTACTGATGCTTAATACGGAAAAAAA                                                       ]
[+] EMBL AU029507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCTTCA GGATTGCCATTATTAGGGCTTCTAGATATCA AACTACACTAGGGTGTTGTGTCTCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGTTGT GCCTTATTTGTATTGTTTGGGTACATTACAGATTGTTGCTCTCTATGTTTTTCCTGAGAACAATGAGAATTACTGATGCTTAATACGGAAGATCTGTATGGCCTTCTCTCACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12662#0 AGAGGAGCAGTTTGAAGAAGTGTCATTTGACAGATGCTTCTATATTTATGGAGGACCTGA TCAATTAGAGGAGTTGGAGGCACTGTCAAGCCATTATGCACTATTATTTAATAGGAAGAA GGGTAAACTTGTTGCTGGGCAGAAAACATATTATGATGGAAAGCTCAAAGAAATACAACA GATTTTTAGTCTTAGCACCAAGATTGATGAAGATGGACCAGACTCTAACAAAGGAAAAAA GATTGAAGCAGCTGATTCTGATTCTGATGCAGAGATGAAGAAGTTATGCGACTCAAGTGT TAGCAAGGCTGCAAAAATGGCTGCAGGGTTCACCACTGCCTTGGGCGGGCTCTCTCCAAA TGAGATTGTCAAACGGACCACTAATAGGCTAGAGACTATTCACTCGGAGGGTGTTCACAG ATTGTCAGAAATGTGTTGCCTTGCAGTCTCTCAACTTCTGCTGCTTGGAAAATCTGTTAT TTCGGCTTCTTCTAAACCAAAGAATGAAGATGATGAAAATGATGTGAAAATTGAATGGCC TGAAGATCCTATTTCAAAGGCTAAAATCATCAGATGGAAAGCACAGTCCATCTCCGTGGA TATTGAAAAGGTGTCTGCAAGTTTTGCTACAGGAATATCCGATGTTGCTGAAGCTTACAT GGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAATTCGGT GCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACCAGTGCTGTCAG CAAGTTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAG TGTATAACTCTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACAT CTCTCTGTACATTCGCTTGTGCAGTCCTTCAGGATTGCCATTATTAGGGCTTCTAGATAT CAAACTACACTAGGGTGTTGTGTCTCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGT TAGTTGGCTGTGCCTTATTTGTATTGTTTGGGTACATTACAGATTGTTGCTCTCTATGTT TTTCCTGAGAATAATGAGAATTACTGATGCTTAATACGGAAAAAAAGTATGGCCTTCTCT CACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12662#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 648
fasta sequence
                              [CCGAGACAAGGGGGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTATTTCAAAGGCTAAAATCATCAGATGGAAAGCACAGTCCATCTCCGTGGATATTGAAAAGGTGTCTGCAAGTTTTGCTACAGGAATATCCGATGTTGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATTTAAATACCGATCAGACCAGTGCTGTCAGCAAGTTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAGTGTATAACTTTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGCAGTCCTTCAGGATTGCCATTATTAGGGGTTCTAGATATCAAACTACCCTAGGGTGTTGTGTCTTGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGCTGTGCCTTATTTGTATTGTTTGGGTACATTACAGATTGTTGCTCTCTATGTTTTTCCTGAGAATAATGAGAATTACTGATGCTTAATACGGAAGAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763322             [CCGAGACAAGGGGGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTATTTCAAAGGCTAAAATCATCAGATGGAAAGCACAGTCCATCTCCGTGGATATTGAAAAGGTGTCTGCAAGTTTTGCTACAGGAATATCCGATGTTGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATTTAAATACCGATCAGACCAGTGCTGTCAGCAAGTTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAGTGTATAACTTTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGCAGTCCTTCAGGATTGCCATTATTAGGGGTTCTAGATATCAAACTACCCTAGGGTGTTGTGTCTTGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGCTGTGCCTTATTTGTATTGTTTGGGTACATTACAGATTGTTGCTCTCTATGTTTTTCCTGAGAATAATGAGAATTACTGATGCTTAATACGGAAGAAAAAAAAAAAAAAAAAA]


>consensus_12662#1 CCGAGACAAGGGGGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTAT TTCAAAGGCTAAAATCATCAGATGGAAAGCACAGTCCATCTCCGTGGATATTGAAAAGGT GTCTGCAAGTTTTGCTACAGGAATATCCGATGTTGCTGAAGCTTACATGGCAGCTATACA AAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGC TAAATACATATCCAACCATTTAAATACCGATCAGACCAGTGCTGTCAGCAAGTTGCAAGA CGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAGTGTATAACTTTG CAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACAT TCGCTTGTGCAGTCCTTCAGGATTGCCATTATTAGGGGTTCTAGATATCAAACTACCCTA GGGTGTTGTGTCTTGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGCTGTG CCTTATTTGTATTGTTTGGGTACATTACAGATTGTTGCTCTCTATGTTTTTCCTGAGAAT AATGAGAATTACTGATGCTTAATACGGAAGAAAAAAAAAAAAAAAAAA



consensusID : consensus_12662#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 430
fasta sequence
                              [TGCTACAGGAATATCCGATGTGGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACCAGTGCTGTCAGCAAGTTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAATGTATAACTCTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGCAGTCCTTCAGGATTGCCATTATTAGGGCTTNTAGATATCAAACTACACTAGGGTGTTGTGTCTCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGTTGTGCCTTATTTGTAAAAAAAAAAAA]

[+] EMBL AU182094             [TGCTACAGGAATATCCGATGTGGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACCAGTGCTGTCAGCAAGTTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAATGTATAACTCTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGCAGTCCTTCAGGATTGCCATTATTAGGGCTTNTAGATATCAAACTACACTAGGGTGTTGTGTCTCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGTTGTGCCTTATTTGTAAAAAAAAAAAA]


>consensus_12662#2 TGCTACAGGAATATCCGATGTGGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGC TGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATC CAACCATCTAAATACCGATCAGACCAGTGCTGTCAGCAAGTTGCAAGACGCCCTCCAATA CTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAATGTATAACTCTGCAGTTCCATATC TCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGCAG TCCTTCAGGATTGCCATTATTAGGGCTTNTAGATATCAAACTACACTAGGGTGTTGTGTC TCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGTTGTGCCTTATTTGTAA AAAAAAAAAA



consensusID : consensus_12662#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 186
fasta sequence
                              [GCAGGGTCTCAAGTTCTGCTGCTNGAAAAATCTGTTATTTCGGCTTCTTCTAAACCAAAGAATGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTATTTCAAAGGCTAAAATCATCANATGGAAAGCACAGNCCANCTCCCTCACATATTGANGGGGGGNCTGNAAGGGNTTT]

[+] EMBL CB097035             [GCAGGGTCTCAAGTTCTGCTGCTNGAAAAATCTGTTATTTCGGCTTCTTCTAAACCAAAGAATGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTATTTCAAAGGCTAAAATCATCANATGGAAAGCACAGNCCANCTCCCTCACATATTGANGGGGGGNCTGNAAGGGNTTT]


>consensus_12662#3 GCAGGGTCTCAAGTTCTGCTGCTNGAAAAATCTGTTATTTCGGCTTCTTCTAAACCAAAG AATGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTATTTCAAAGGCT AAAATCATCANATGGAAAGCACAGNCCANCTCCCTCACATATTGANGGGGGGNCTGNAAG GGNTTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12662#0      AGAGGAGCAGTTTGAAGAAGTGTCATTTGACAGATGCTTCTATATTTATGGAGGACCTGA 60
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      ------------------------------------------------------------
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      TCAATTAGAGGAGTTGGAGGCACTGTCAAGCCATTATGCACTATTATTTAATAGGAAGAA 120
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      ------------------------------------------------------------
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      GGGTAAACTTGTTGCTGGGCAGAAAACATATTATGATGGAAAGCTCAAAGAAATACAACA 180
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      ------------------------------------------------------------
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      GATTTTTAGTCTTAGCACCAAGATTGATGAAGATGGACCAGACTCTAACAAAGGAAAAAA 240
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      ------------------------------------------------------------
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      GATTGAAGCAGCTGATTCTGATTCTGATGCAGAGATGAAGAAGTTATGCGACTCAAGTGT 300
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      ------------------------------------------------CCGAGACAAGGG 12
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      TAGCAAGGCTGCAAAAATGGCTGCAGGGTTCACCACTGCCTTGGGCGGGCTCTCTCCAAA 360
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      GGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTATTTCAAAGGCTAA 72
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      TGAGATTGTCAAACGGACCACTAATAGGCTAGAGACTATTCACTCGGAGGGTGTTCACAG 420
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      AATCATCAGATGGAAAGCACAGTCCATCTCCGTGGATATTGAAAAGGTGTCTGCAAGTTT 132
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      ATTGTCAGAAATGTGTTGCCTTGCAGTCTCTCAACTT-CTGCTGCTTGGAAAAT-----C 474
consensus_12662#3      ----------------------GCAGGGTCTCAAGTT-CTGCTGCTNGAAAAAT-----C 32
consensus_12662#1      TGCTACAGGAATATCCGATGTTGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGC 192
consensus_12662#2      TGCTACAGGAATATCCGATGTGGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGC 60
                                             ** *   ** *  *  * ***      **        *

consensus_12662#0      TGTTATTTCGGCT--TCTTCTAAACCAAAGAATGAAGATGATGAAAATGATGTGAAAATT 532
consensus_12662#3      TGTTATTTCGGCT--TCTTCTAAACCAAAGAATGAAGATGATGAAAATGATGTGAAAATT 90
consensus_12662#1      TGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATC 252
consensus_12662#2      TGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATC 120
                       **  *    ** *  ***    *******    *  *  *  ****   *  *  * ** 

consensus_12662#0      GAATGGCCTGAAGATCCTATTTCAAAGGCTAAAATCATCAGATGGAAAG-CACAGTCCAT 591
consensus_12662#3      GAATGGCCTGAAGATCCTATTTCAAAGGCTAAAATCATCANATGGAAAG-CACAGNCCAN 149
consensus_12662#1      CAACCATTTAAATA--CCGATCAGACCAGTGCTGTCAGCAAGTTGCAAGACGCCCTCCAA 310
consensus_12662#2      CAACCATCTAAATA--CCGATCAGACCAGTGCTGTCAGCAAGTTGCAAGACGCCCTCCAA 178
                        **     * ** *  *   *   *    *    *** **  * * *** * *   *** 

consensus_12662#0      CTCCGT-GG-ATATTGAAAAGGTGTCTGCAAGTTTTGCTACAGGAATATCCGATGTTGCT 649
consensus_12662#3      CTCCCT-CACATATTGANGGGGGGNCTGNAAGGGNTTT---------------------- 186
consensus_12662#1      TACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAGTGTATAACTTTGCAGTTCCATA 370
consensus_12662#2      TACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAATGTATAACTCTGCAGTTCCATA 238
                         *       ** ***         **  **                             

consensus_12662#0      GAAGCTTACATGGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAAC 709
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      TCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGC 430
consensus_12662#2      TCTCTACCCTGCTGTTATCATTGTTGAACTGTTAACATCTCTCTGTACATTCGCTTGTGC 298
                                                                                   

consensus_12662#0      CAAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACC 769
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      AGTCCTTCAGGATTGCCATTATTAGGGGTTCTAGATATCAAACTACCCTAGGGTGTTGTG 490
consensus_12662#2      AGTCCTTCAGGATTGCCATTATTAGGGCTTNTAGATATCAAACTACACTAGGGTGTTGTG 358
                                                                                   

consensus_12662#0      AGTGCTGTCAGCAAGTTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCT 829
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      TCTTGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGCTGTGCCTTATTTGT 550
consensus_12662#2      TCTCGTTTACGTGCGCAGGTCAAGCATCATGGAATCGTTAGTTGGTTGTGCCTTATTTGT 418
                                                                                   

consensus_12662#0      TCAATGCCAAGTGTATAACTCTGCAGTTCCATATCTCTACCCTGCTGTTATCATTGTTGA 889
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      ATTGTTTGGGTACATTACAGATTGTTGCTCTCTATGTTTTTCCTGAGAATAATGAGAATT 610
consensus_12662#2      AAAAAAAAAAAA------------------------------------------------ 430
                                                                                   

consensus_12662#0      ACTGTTAACATCTCTCTGTACATTCGCTTGTGCAGTCCTTCAGGATTGCCATTATTAGGG 949
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      ACTGATGCTTAATACGGAAGAAAAAAAAAAAAAAAAAA---------------------- 648
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      CTTCTAGATATCAAACTACACTAGGGTGTTGTGTCTCGTTTACGTGCGCAGGTCAAGCAT 1009
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      ------------------------------------------------------------
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      CATGGAATCGTTAGTTGGCTGTGCCTTATTTGTATTGTTTGGGTACATTACAGATTGTTG 1069
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      ------------------------------------------------------------
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      CTCTCTATGTTTTTCCTGAGAATAATGAGAATTACTGATGCTTAATACGGAAAAAAAGTA 1129
consensus_12662#3      ------------------------------------------------------------
consensus_12662#1      ------------------------------------------------------------
consensus_12662#2      ------------------------------------------------------------
                                                                                   

consensus_12662#0      TGGCCTTCTCTCACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1181
consensus_12662#3      ----------------------------------------------------
consensus_12662#1      ----------------------------------------------------
consensus_12662#2      ----------------------------------------------------
                                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)