These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12664#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2422 fasta sequence [AGAACCCCGCATCCCACTTCTTCCAGGCTCCAGCTCTTCTTCACCCTAACCCAGATCCGCGGGGACCCAGCCGATTCGCCCAGCCACGCCACCGAGCGCTCGTCTCGTCTCGTCTCTCGACCCAATCCCGTCCCCCGGCGCGACGCCCCGCCGCGCGATGGCCGACGGCGCCAGCAGCAGCGGGGCCGCCTCGGCCTCCGGCCCCGGTGGCGGGGGCGGCGGGGAGTCGGTGGTGATCGACTACGGCCGGCGCCGCACGGCCTGCGGCTACTGCCGATCCACCGGCCAGACGAGCATCTCGCACGGTCTATGGGCTAACAGCCTGAGAGCTGATGACTATCAAGCTCTTCTTGACCGTGGGTGGAGGAGATCTGGTTGTTTTCTTTACAAACCTGAGATGGAACGTACTTGCTGTCCTCAATATACAATACGCTTGAAGGCAAATGATTTCATTTGTTCGAAGGAGCAAGGTCGTGTACTTAAAAAGATGCAAAGGTTCCTTGATGGTGAGCTTGATCCACAGGTTGGAAGTCCACAGAATAAAACTAGCCCTACAAAACATTCACTCGCTGAACCTATGAATATGCCGGTCTCAAAAATATCCAAGACATTA-ACAAATGATTTTCAAGCAGCCAAATGTCCAAATTTATTTGAAGAAGATGAGTTCATCAGTTGCCTGTCTAGCAAAATTAATGAGGCAGTGGGTATGTCCTTCCAAGTTGGTACATTAGGTTCTGATGTTCAACTCCCTAAAGCTGTTGTAAAGACTGTTAAACCACAACTAAAAAAGAAAGTAGGAGGAGCATCACAAGACAAGAAAGTAGGAGAAGCAGTACAAGATTTATTGTACACATGTAATATAAGCTTTCAAATAGTGGCAGAAATCAGACGTGCATTGCCTAAGGAGAAGGATGCTAATCACAATAAAGTAGTAGCAGATATTTCTCCAAACTCTATTGCAGAAAAGCTGGCCATGACAATGGAGTGCCATGGAGATATTGCTGGTTTAGCAGTAAAAGCCTGCAATGGCCATCTGAACTTCTATTCAGTCACCAATCAGACAAAGCAGAACAAAACCAGTATCATTGTGTCTACACATGCTCCAGATAAATCTAGTAGCTCAAAGCAAAGCTCTGTGAACAAAAATACTGTAAGAGTTCCCCAGAAAAGAAGAAAGCTTGAAATTAAAATGAGAAGGTCACATTTTGATCCTGAGGAGTTTGCTTTATATCAAAGATATCAGACAAAAGTGCACAAGGAGAAGAAAGTTTCAGAAAGCTCATACAAGAGATTTCTAGTGGATACACCAATCGTGTTTGTTCCCCCGCGGAGTGGTGATAATACAGTTCCACCTTGTGGATTTGGTTCATTTCACCAGCAGTACAGAATTGATGGAAAACTTGTGGCAGTTGGTGTAGTTGATATCCTTCCTAAGTGCCTGTCAAGCAAGTATTTGTTCTGGGATCCTGACTTTGCTTTCCTATCTCTTGGAAAGTATACAGCTCTGAAGGAGATAGATTGGGTCAAGACAACACAGGAGCACTGCCCCAACCTTCAATATTATTATCTTGGTTATTACATACATTCCTGCAATAAGATGAGATACAAAGCTGCGTATCGACCATCAGAACTTCTCTGTCCAGTCCGTTTCGAGTGGGTGTGCTATGACAGTGCCAAACGTTTACTAGATAAGAGCCTGTATTCTGTCCTATCTGATTTTGCCCAAATACAAGATGAGATGCCTCAGCCACAGAATTCTCATCTTGATACTGAGTTATCAAAAAATGACAATTGTGAGTCTCCCATCGATGAGGATGATGAAGATTTGTCCTATGATG-ACTCAGACA-TGATGGTTGATGAAGAGATGGTTCGATCAGAATCCAACA-CTGATGTAATGGAGGATTGTTCCAGCATAATTGATTTTGAAAATGTCA-TGATGGATCTGAATGGTTCTCGAGTTAAATATAAGGATCTTCTGGGAGTCGTTGGACGAATCGAGAGGAGGCACCTCGAACAGCTAGAAAGGCAATTGAGCAAATACGT-GAAAGTTGTAGGGAAGGAGCTATCTGATCG-CATGGTTTATT-CCCTGTAGTTGGCCTG-CAATTCTGTCCC-AAGGGAGCAATGCGACCATTTAGAGGTACA-ATAACATGTTTATGCTAATCGCTTCGCAGTCGAATTCTGGTGGGTTCAGGTTGGAGGCTGGAATGACACATTTTTCCGGCCGATTCGTTATCTGTCATTGAAGTCCGTATTCCATAAACTGTTGGCCGAAGGGTATAGCACAAGTCGTTTGGTTTCTGCACATGATTCTACATAAAAATAGCACATCTGTTTCTTGATG-AAAAAACTCGAGGACCGCAGGCGTTGAAATGAGAAGAATATGTGATTTACAGAGTGTCCAACTAAAAAACAGCAAAAAAAA] [+] EMBL AK065861 [AGAACCCCGCATCCCACTTCTTCCAGGCTCCAGCTCTTCTTCACCCTAACCCAGATCCGCGGGGACCCAGCCGATTCGCCCAGCCACGCCACCGAGCGCTCGTCTCGTCTCGTCTCTCGACCCAATCCCGTCCCCCGGCGCGACGCCCCGCCGCGCGATGGCCGACGGCGCCAGCAGCAGCGGGGCCGCCTCGGCCTCCGGCCCCGGTGGCGGGGGCGGCGGGGAGTCGGTGGTGATCGACTACGGCCGGCGCCGCACGGCCTGCGGCTACTGCCGATCCACCGGCCAGACGAGCATCTCGCACGGTCTATGGGCTAACAGCCTGAGAGCTGATGACTATCAAGCTCTTCTTGACCGTGGGTGGAGGAGATCTGGTTGTTTTCTTTACAAACCTGAGATGGAACGTACTTGCTGTCCTCAATATACAATACGCTTGAAGGCAAATGATTTCATTTGTTCGAAGGAGCAAGGTCGTGTACTTAAAAAGATGCAAAGGTTCCTTGATGGTGAGCTTGATCCACAGGTTGGAAGTCCACAGAATAAAACTAGCCCTACAAAACATTCACTCGCTGAACCTATGAATATGCCGGTCTCAAAAATATCCAAGACATTA ACAAATGATTTTCAAGCAGCCAAATGTCCAAATTTATTTGAAGAAGATGAGTTCATCAGTTGCCTGTCTAGCAAAATTAATGAGGCAGTGGGTATGTCCTTCCAAGTTGGTACATTAGGTTCTGATGTTCAACTCCCTAAAGCTGTTGTAAAGACTGTTAAACCACAACTAAAAAAGAAAGTAGGAGGAGCATCACAAGACAAGAAAGTAGGAGAAGCAGTACAAGATTTATTGTACACATGTAATATAAGCTTTCGAATAGTGGCAGAAATCAGACGTGCATTGCCTAAGGAGAAGGATGCTAATCACAATAAAGTAGTAGCAGATATTTCTCCAAACTCTATTGCAGAAAAGCTGGCCATGACAATGGAGTGCCATGGAGATATTGCTGGTTTAGCAGTAAAAGCCTGCAATGGCCATCTGAACTTCTATTCAGTCACCAATCAGACAAAGCAGAACAAAACCAGTATCATTGTGTCTACACATGCTCCAGATAAATCTAGTAGCTCAAAGCAAAGCTCTGTGAACAAAAATACTGTAAGAGTTCCCCAGAAAAGAAGAAAGCTTGAAATTAAAATGAGAAGGTCACATTTTGATCCTGAGGAGTTTGCTTTATATCAAAGATATCAGACAAAAGTGCACAAGGAGAAGAAAGTTTCAGAAAGCTCATACAAGAGATTTCTAGTGGATACACCAATCGTGTTTGTTCCCCCGCGGAGTGGTGATAATACAGTTCCACCTTGTGGATTTGGTTCATTTCACCAGCAGTACAGAATTGATGGAAAACTTGTGGCAGTTGGTGTAGTTGATATCCTTCCTAAGTGCCTGTCAAGCAAGTATTTGTTCTGGGATCCTGACTTTGCTTTCCTATCTCTTGGAAAGTATACAGCTCTGAAGGAGATAGATTGGGTCAAGACAACACAGGAGCACTGCCCCAACCTTCAATATTATTATCTTGGTTATTACATACATTCCTGCAATAAGATGAGATACAAAGCTGCGTATCGACCATCAGAACTTCTCTGTCCAGTCCGTTTCGAGTGGGTGTGCTATGACAGTGCCAAACGTTTACTAGATAAGAGCCTGTATTCTGTCCTATCTGATTTTGCCCAAATACAAGATGAGATGCCTCAGCCACAGAATTCTCATCTTGATACTGAGTTATCAAAAAATGACAATTGTGAGTCTCCCATCGATGAGGATGATGAAGATTTGTCCTATGATG ACTCAGACA TGATGGTTGATGAAGAGATGGTTCGATCAGAATCCAACA CTGATGTAATGGAGGATTGTTCCAGCATAATTGATTTTGAAAATGTCA TGATGGATCTGAATGGTTCTCGAGTTAAATATAAGGATCTTCTGGGAGTCGTTGGACGAATCGAGAGGAGGCACCTCGAACAGCTAGAAAGGCAATTGAGCAAATACGT GAAAGTTGTAGGGAAGGAGCTATCTGATCG CATGGTTTATT CCCTGTAGTTGGCCTG CAATTCTGTCCC AAGGGAGCAATGCGACCATTTAGAGGTACA ATAACATGTTTATGCTAATCGCTTCGCAGTCGAATTCTGGTGGGTTCAGGTTGGAGGCTGGAATGACACATTTTTCCGGCCGATTCGTTATCTGTCATTGAAGT ] [+] EMBL AK099450 [ GCTCTTCTTCACCCTAACCCAGATCCGCGGGGACCCATCCGATTCGCCCAGCCACGCCACCGAGCGCTCGTCTCGTCTCGTCTCTCGACCCAATCCCGTCCCCCGGCGCGACGCCCCGCCGCGCGATGGCCGACGGCGCCAGCAGCAGCGGGGCCGCCTCGGCCTCCGGCCCCGGTGGCGGGGGCGGCGGGGAGTCGGTGGTGATCGACTACGGCCGGCGCCGCACGGCCTGCGGCTACTGCCGATCCACCGGCCAGACGAGCATCTCGCACGGTCTATGGGCTAACAGCCTGAGAGCTGATGACTATCAAGCTCTTCTTGACCGTGGGTGGAGGAGATCTGGTTGTTTTCTTTACAAACCTGAGATGGAACGTACTTGCTGTCCTCAATATACAATACGCTTGAAGGCAAATGATTTCATTTGTTCGAAGGAGCAAGGTCGTGTACTTAAAAAGATGCAAAGGTTCCTTGATGGTGAGCTTGATCCACAGGTTGGAAGTCCACAGAATAAAACTAGCCCTACAAAACATTCACTCGCTGAACCTATGAATATGCCGGTCTCAAAAATATCCAAGACATTA ACAAATGATTTTCAAGCAGCCAAATGTCCAAATTTATTTGAAGAAGATGAGTTCATCAGTTGCCTGTCTAGCAAAATTAATGAGGCAGTGGGTATGTCCTTCCAAGTTGGTACATTAGGTTCTGATGTTCAACTCCCTAAAGCTGTTGTAAAGACTGTTAAACCACAACTAAAAAAGAAAGTAGGAGGAGCATCACAAGACAAGAAAGTAGGAGAAGCAGTACAAGATTTATTGTACACATGTAATATAAGCTTTCAAATAGTGGCAGAAATCAGACGTGCATTGCCTAAGGAGAAGGATGCTAATCACAATAAAGTAGTAGCAGATATTTCTCCAAACTCTATTGCAGAAAAGCTGGCCATGACAATGGAGTGCCATGGAGATATTGCTGGTTTAGCAGTAAAAGCCTGCAATGGCCATCTGAACTTCTATTCAGTCACCAATCAGACAAAGCAGAACAAAACCAGTATCATTGTGTCTACACATGCTCCAGATAAATCTAGTAGCTCAAAGCANAGCTCTGTGAACAAAAATACTGTAAGAGTTCCCCAGAAAAGAAGAAAGCTTGAAATTAAAATGAGAAGGTCACATTTTGATCCTGAGGAGTTTGCTTTATATCAAAGATATCAGACAAAAGTGCACAAGGAGAAGAAAGTTTCAGAAAGCTCATACAAGAGATTTCTAGTGGATACACCAATCGTGTTTGTTCCCCCGCGGAGTGGTGATAATACAGTTCCACCTTGTGGATTTGGTTCATTTCACCAGCAGTACAGAATTGATGGAAAACTTGTGGCAGTTGGTGTAGTTGATATCCTTCCTAAGTGCCTGTCAAGCAAGTATTTGTTCTGGGATCCTGACTTTGCTTTCCTATCTCTTGGAAAGTATACAGCTCTGAAGGAGATAGATTGGGTCAAGACAACACAGGAGCACTGCCCCAACCTTCAATATTATTATCTTGGTTATTACATACATTCCTGCAATAAGATGAGATACAAAGCTGCGTATCGACCATCAGAACTTCTCTGTCCAGTCCGTTTCGAGTGGGTGTGCTATGACAGTGCCAAACGTTTACTAGATAAGAGCCTGTATTCTGTCCTATCTGATTTTGCCCAAATACAAGATGAGATGCCTCAGCCACAGAATTCTCATCTTGATACTGAGTTATCAAAAAATGACAATTGTGAGTCTCCCATCGATGAGGATGATGAAGATTTGTCCTATGATG ACTCAGACA TGATGGTTGATGAAGAGATGGTTCGATCAGAATCCAACA CTGATGTAATGGAGGATTGTTCCAGCATAATTGATTTTGAAAATGTCA TGATGGATCTGAATGGTTCTCGAGTTAAATATAAGGATCTTCTGGGAGTCGTTGGACGAATCGAGAGGAGGCACCTCGAACAGCTAGAAAGGCAATTGAGCAAATACGT GAAAGTTGTAGGGAAGGAGCTATCTGATCG CATGGTTTATT CCCTGTAGTTGGCCTG CAATTCTGTCCC AAGGGAGCAATGCGACCATTTAGAGGTACA ATAACATGTTTATGCTAATCGCTTCGCAGTCGAATTCTGGTGGGTTCAGGTTGGAGGCTGGAATGACACATTTTTCCGGCCGATTCGTTATCTGTCATTGAAGTCCGTATTCCATAAACTGTTGGCCGAAGGGTATAGCACAAGTCGTTTGGTTTCTGCACATGATTCTACATAAAAATAGCACATCTGTTTCTTGATGAAAAAAACTCGAGGACCGCAGGCGTTGAAATGAGAAGAATATGTGATTTACAGAGTGTCCAACT ] [+] EMBL AK071336 [ GGGGACCCAGCCGATTCGCCCAGCCACGCCACCGAGCGCTCGTCTCGTCTCGTCTCTCGACCCAATCCCGTCCCCCGGCGCGACGCCCCGCCGCGCGATGGCCGACGGCGCCAGCAGCAGCGGGGCCGCCTCGGCCTCCGGCCCCGGTGGCGGGGGCGGCGGGGAGTCGGTGGTGATCGACTACGGCCGGCGCCGCACGGCCTGCGGCTACTGCCGATCCACCGGCCAGACGAGCATCTCGCACGGTCTATGGGCTAACAGCCTGAGAGCTGATGACTATCAAGCTCTTCTTGACCGTGGGTGGAGGAGATCTGGTTGTTTTCTTTACAAACCTGAGATGGAACGTACTTGCTGTCCTCAATATACAATACGCTTGAAGGCAAATGATTTCATTTGTTCGAAGGAGCAAGGTCGTGTACTTAAAAAGATGCAAAGGTTCCTTGATGGTGAGCTTGATCCACAGGTTGGAAGTCCACAGAATAAAACTAGCCCTACAAAACATTCACTCGCTGAACCTATGAATATGCCGGTCTCAAAAATATCCAAGACATTA ACAAATGATTTTCAAGCAGCCAAATGTCCAAATTTATTTGAAGAAGATGAGTTCATCAGTTGCCTGTCTAGCAAAATTAATGAGGCAGTGGGTATGTCCTTCCAAGTTGGTACATTAGGTTCTGATGTTCAACTCCCTAAAGCTGTTGTAAAGACTGTTAAACCACAACTAAAAAAGAAAGTAGGAGGAGCATCACAAGACAAGAAAGTAGGAGAAGCAGTACAAGATTTATTGTACACATGTAATATAAGCTTTCAAATAGTGGCAGAAATCAGACGTGCATTGCCTAAGGAGAAGGATGCTAATCACAATAAAGTAGTAGCAGATATTTCTCCAAACTCTATTGCAGAAAAGCTGGCCATGACAATGGAGTGCCATGGAGATATTGCTGGTTTAGCAGTAAAAGCCTGCAATGGCCATCTGAACTTCTATTCAGTCACCAATCAGACAAAGCAGAACAAAACCAGTATCATTGTGTCTACACATGCTCCAGATAAATCTAGTAGCTCAAAGCAAAGCTCTGTGAACAAAAATACTGTAAGAGTTCCCCAGAAAAGAAGAAAGCTTGAAATTAAAATGAGAAGGTCACATTTTGATCCTGAGGAGTTTGCTTTATATCAAAGATATCAGACAAAAGTGCACAAGGAGAAGAAAGTTTCAGAAAGCTCATACAAGAGATTTCTAGTGGATACACCAATCGTGTTTGTTCCCCCGCGGAGTGGTGATAATACAGTTCCACCTTGTGGATTTGGTTCATTTCACCAGCAGTACAGAATTGATGGAAAACTTGTGGCAGTTGGTGTAGTTGATATCCTTCCTAAGTGCCTGTCAAGCAAGTATTTGTTCTGGGATCCTGACTTTGCTTTCCTATCTCTTGGAAAGTATACAGCTCTGAAGGAGATAGATTGGGTCAAGACAACACAGGAGCACTGCCCCAACCTTCAATATTATTATCTTGGTTATTACATACATTCCTGCAATAAGATGAGATACAAAGCTGCGTATCGACCATCAGAACTTCTCTGTCCAGTCCGTTTCGAGTGGGTGTGCTATGACAGTGCCAAACGTTTACTAGATAAGAGCCTGTATTCTGTCCTATCTGATTTTGCCCAAATACAAGATGAGATGCCTCAGCCACAGAATTCTCATCTTGATACTGAGTTATCAAAAAATGACAATTGTGAGTCTCCCATCGATGAGGATGATGAAGATTTGTCCTATGATG ACTCAGACA TGATGGTTGATGAAGAGATGGTTCGATCAGAATCCAACA CTGATGTAATGGAGGATTGTTCCAGCATAATTGATTTTGAAAATGTCA TGATGGATCTGAATGGTTCTCGAGTTAAATATAAGGATCTTCTGGGAGTCGTTGGACGAATCGAGAGGAGGCACCTCGAACAGCTAGAAAGGCAATTGAGCAAATACGT GAAAGTTGTAGGGAAGGAGCTATCTGATCG CATGGTTTATT CCCTGTAGTTGGCCTG CAATTCTGTCCC AAGGGAGCAATGCGACCATTTAGAGGTACA ATAACATGTTTATGCTAATCGCTTCGCAGTCGAATTCTGGTGGGTTCAGGTTGGAGGCTGGAATGACACATTTTTCCGGCCGATTCGTTATCTGTCATTGAAGTCCGTATTCCATAAACTGTTGGCCGAAGGGTATAGCACAAGTCGTTTGGTTTCTGC ] [+] EMBL C26719 [ AGCCGATTCGCCCAGCCACGCCACCGAGCGCTCGTNTCGTCTCGTCTCTCGACCCAATCCCGTCCCCCGGCGTGACGNCCCGCCGCGCGATGGCCGACGG GCCA NAGCAGCGGGGCCGCCTCGG CTCCGG CCNGGTGGCGGGGGNGGCGGGGAGTCGGTGGTGATCGANTA ] [+] EMBL CA754594 [ ACGCCACCGAGCGCTCGTCTCGTCTCGTCTCTCGACCCAATCCCGTCCCCCGGCGCGACGCCCCGCCGCGCGATGGCCGACGGCGCCAGCAGCAGCGGGGCCGCCTCGGCCTCCGGCCCCGGTGGCGGGGGCGGCGGGGAGTCGGTGGTGATCGACTACGGCCGGCGCCGCACGGCCTGCGGCTACTGCCGATCCACCGGCCAGACGAGCATCTCGCACGGTCTATGGGCTAACAGCCTGAGAGCTGATGACTATCAAGCTCTTCTTGACCGTGGGTGGAGGAGATCTGGTTGTTTTCTTTACAAACCTGAGATGGAACGTACTTGCTGTCCTCAATATACAATACGCTTGAAGGCAAATGATTTCATTTGTTCGAAGGAGCAAGGTCGTGTACTTAAAAAGATGCATAGGTTCCTTGATGGTGAGCTTGATCCACAGGTTGGAAGTCCACAGAATAAAACTAGCCCTACCAAACATTCACTCGCTGAACCTATGAATATGCCGGTCTCCAAAATATCCCAGACATTACAC AATGATTTTCAAGCAGCCAAATGTCCAAATTTATTTGAAGAAGATGAGTTCATCAGTTGCCTGTCTAGC AAATTA ] [+] EMBL CB634125 [ GCGGGGAGTCGGTGGTGATCGACTACGGCCGGCGCCGCACGGCCTGCGGCTACTGCCGATCCACCGGCCAGACGAGCATCTCGCACGGTCTATGGGCTAACAGCCTGAGAGCTGATGACTATCAAGCTCTTCTTGACCGTGGGTGGAGGAGATCTGGTTGTTTTCTTTACAAACCTGAGATGGAACGTACTTGCTGTCCTCAATATACAATACGCTTGAAGGCAAATGATTTCATTTGTTCGAAGGAGCAAGGTCGTGTACTTAAAAAGATGCAAAGGTTCCTTGATGGTGAGCTTGATCCACAGGTTGGAAGTCCACAGAATAAAACTAGCCCTACAAAACATTCACTCGCTGAACCTATGAATATGCCGGTCTCAAAAATATCCAAGACATTA ACAAATGATTTTCAAGCAGCCAAATGTCCAAATTTATTTGAAGAAGATGAGTTCATCAGTTGCCTGTCTAGCAAAATTAATGAGGCAGTGGGTATGTCCTTCCAAGTTGGTACATTAGGTTCTGATGTTCAACTCCCTAAAGCTGTTGTAAAGACTGTTAAACCACAACTAAAAAAGAAAGTAGGAGGAGCATCACAAGACAAGAAAGTAGGAGAAGCAGTACAAGATTTATTGTACACATGTAATATAAGCTTTCAAATAGTGGCAGAAATCAGACGTGCATTGCCTAAGGAGAAGGATGCTAATCACAATGAAGTAGTAGCAGATATTTCTCCAAACTCTATTGCAGAAAAGCTGGCCATGACAATGGAGTGCCATGGAGATATTGCTGGTTTAGCAGTAAAAGCCTGCAATGGCCATCTGAACT ] [+] EMBL BQ906284 [ CCTATGATGAACTCGGACANTGATGGTTGATGAAGAGATGGTTCGATCAGAATCCAACACCTGATGTAATGGAGGATTGTTCCAGCATAATTGATTTTGAAAATGTCACTGATGGATCTGAATGGTTCTCGAGTTAAATATAAGGATCTTCTGGGAGTCGTTGGACGAATCGAGAGGAGGCACCTCGAACAGCTAGAAAGGCNATTGAGCAAATACGT GAAAGTTGTAGGGAAGGAGCTATCTGATCG CATGGTTTATT CCCTGTAGTTGGCCTG CAATTCTGTCCC AGGGAGCAATGCGACCATTTAGAGGTACANATAACATGTTTATGCTAATCGCTTCGCAGTCGAATTCTGGTGGGTTCAGGTTGGAGGCTGGAATGACACATTTTTCCGGCCGATTCGTTATCTGTCATTGAAGTCCGTATTCCATAAACTGTTGGCCGAAGGGTATAGCACAAGTCGTTTGGTTTCTGCACATGATTCTACATAAAAATAGCACATCTGTTTCTTGATG AAAAAACTCGAGGACCGCAGGCGTTGAAATGAGAAGAATATGTGATTTACAGAGTCTCCAAAAAAAAAA ] [+] EMBL AU082870 [ agcCAAATNCGTGGAAAGTTGTAGGGAAGGAGCTATCTGANCGCCATGGTTTATTCCCCTGTAGTTGGCCTGCCAATTCTGTCCCAAAGGGACCAATGCGNCCATTTAGAGGTACA ATANCATGTTTATGCTAATCCNTTCGCAGTCGAATTCTGGTGGGTTCAGGTTGGAGGCTGGAATGACACATTTTTCCGGCCGATTCGTTATCTGTCATTGAAGTCCGTATTCCATAAACTGTTGGCCGAAGGGTATAGCACAAGTCGTTTGGTTTCTGCACATGATTCTACATAAAAATAGCACATCTGTTTCTTGATG AAAAAACTCGAGGACCGCAGGCGTTGAAATGAGAAGAATATGTGATTTACAGAGTGTCCAACTGTTAAACAGCAAAAAAAA] consensusID : consensus_12664#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 824 fasta sequence [ATTCCTGCAATAAGATGAGATACAAAGCTGCGTATCGACCATCAGAACTTCTCTGTCCAGTCCGTTTCGAGTGGGTGTGCTATGACAGTGCCAAACGTTTACTAGATAAGAGCCTGTATTCTGTCCTATCTGATTTTGCCCAAATACAAGATGAGATGCCTCAGCCACAGAATTCTCATCTTGATACTGAGTTATCAAAAAATGACAATTGTGAGTCTCCCATCGATGAGGATGATGAAGATTTGTCCTATGATGACTCGGACATGATGGTTGATGAAGAGATGGTTCGATCAGAATCCAACACTGATGTAATGGAGGATTGTTCCAGCATAATTGATTTTGAAAATGTCATGATGGATCTGAATGGTTCTCGAGTTAAATATAAGGATCTTCTGGGAGTCGTTGGACGAATCGAGAGGAGGCACCTCGAACAGCTAGAAAGGCAATTGAGCAAATACGTGAAAGTTGTAGGGAAGGAGCTATCTGATCGCATGGTTTATTCCCTGTAGTTGGCCTGCAATTCTGTCCCAAGGGAGCAATGCGACCATTTAGAGGTACAATAACATGTTTATGCTAATCGCTTCGCAGTCGAATTCTGGTGGGTTCAGGTTGGAGGCTGGAATGACACATTTTTCCGGCCGATTCGTTATCTGTCATTGAAGTCCGTATTCCATAAACTGTTGGCCGAAGGGTATAGCACAAGTCGTTTGGTTTCTGCACATGATTCTACATAAAAATAGCACATCTGTTTCTTGATGAAAAAACTCGAGGACCGCAGGCGTTGAAATGAGAAGAATATGTGATTTACAGAGTAAAAAAAAAGA] [-] EMBL CB634126 [ATTCCTGCAATAAGATGAGATACAAAGCTGCGTATCGACCATCAGAACTTCTCTGTCCAGTCCGTTTCGAGTGGGTGTGCTATGACAGTGCCAAACGTTTACTAGATAAGAGCCTGTATTCTGTCCTATCTGATTTTGCCCAAATACAAGATGAGATGCCTCAGCCACAGAATTCTCATCTTGATACTGAGTTATCAAAAAATGACAATTGTGAGTCTCCCATCGATGAGGATGATGAAGATTTGTCCTATGATGACTCGGACATGATGGTTGATGAAGAGATGGTTCGATCAGAATCCAACACTGATGTAATGGAGGATTGTTCCAGCATAATTGATTTTGAAAATGTCATGATGGATCTGAATGGTTCTCGAGTTAAATATAAGGATCTTCTGGGAGTCGTTGGACGAATCGAGAGGAGGCACCTCGAACAGCTAGAAAGGCAATTGAGCAAATACGTGAAAGTTGTAGGGAAGGAGCTATCTGATCGCATGGTTTATTCCCTGTAGTTGGCCTGCAATTCTGTCCCAAGGGAGCAATGCGACCATTTAGAGGTACAATAACATGTTTATGCTAATCGCTTCGCAGTCGAATTCTGGTGGGTTCAGGTTGGAGGCTGGAATGACACATTTTTCCGGCCGATTCGTTATCTGTCATTGAAGTCCGTATTCCATAAACTGTTGGCCGAAGGGTATAGCACAAGTCGTTTGGTTTCTGCACATGATTCTACATAAAAATAGCACATCTGTTTCTTGATGAAAAAACTCGAGGACCGCAGGCGTTGAAATGAGAAGAATATGTGATTTACAGAGTAAAAAAAAAGA] [+] EMBL BM418813 [ GACTCGGACATGATGGTTGATGAAGAGATGGTTCGATCAGAATCCAACACTGATGTAATGGAGGATTGTTCCAGCATAATTGATTTTGAAAATGTCATGATGGATCTGAATGGTTCTCGAGTTAAATATAAGGATCTTCTGGGAGTCGTTGGACGAATCGAGAGGAGGCACCTCGAACAGCTAGAAAGGCAATTGAGC AATACGTGAAAGTTGTAGGGAAGGAGCTATCTGATCGCATGGTTTATTCCCTGTAGTTGGCCTGCAATTCTGTCCCAAGGGAGC ATGCGACCATTTAGAGGTACAATAACATGTTTATGCTAATCGCTTCGCAGTCGAATTCTGGTGGGTTCAGGTTGGAGGCTGGAATGACACATTTTTCCGGCCGATTCGTTATCTGTCATTGAAGTCCGTATTCCATAAACTGTTGGCCGAAGGGTATAGCACAAGTCGTTTGGTTTCTGCACATGATTCTACATAAAAATAGCACATCTGTTTCTTGATGAAAAAACTCGAGGACC CA GCGTTGAAATGAGAAGAATATGTGATTTAaaaaa ] consensusID : consensus_12664#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 405 fasta sequence [AAAGGCAATTGAGCAAATACGTGAAAGTTGTAGGGAAGGAGCTATCTGATCGCATGGTTTATTCCCTGTAGTTGGCCTGCAATTCTGTCCCAAGGGAACAATGCGACCATTTAGAGTACAATAACACTGTTTTATGCTAATCGCTTCCCAATCGAATTCCTGGTGGGTTCAAGGTTTGGAAGGCTGGAATGACACCATTTTTCCCCGGCGAATCCCTTATCTGTTCCATTGAAATTCCCTATTCCCATAAACTTGTTTGGCCCAAAGGGTTTTTACCACCAATTTTCCTTTGTTTTTCCCAAAAAAAAAGGGGGGCCCCGGGTTCCCCAATTCCCCCCCTCTAAATTGAAATTCCCTTTTTTAACAAATTCCCCCTGGGGCCCCCCCCTTTTTTACACACCCTTC] [+] EMBL AA754176 [AAAGGCAATTGAGCAAATACGTGAAAGTTGTAGGGAAGGAGCTATCTGATCGCATGGTTTATTCCCTGTAGTTGGCCTGCAATTCTGTCCCAAGGGAACAATGCGACCATTTAGAGTACAATAACACTGTTTTATGCTAATCGCTTCCCAATCGAATTCCTGGTGGGTTCAAGGTTTGGAAGGCTGGAATGACACCATTTTTCCCCGGCGAATCCCTTATCTGTTCCATTGAAATTCCCTATTCCCATAAACTTGTTTGGCCCAAAGGGTTTTTACCACCAATTTTCCTTTGTTTTTCCCAAAAAAAAAGGGGGGCCCCGGGTTCCCCAATTCCCCCCCTCTAAATTGAAATTCCCTTTTTTAACAAATTCCCCCTGGGGCCCCCCCCTTTTTTACACACCCTTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12664#0 AGAACCCCGCATCCCACTTCTTCCAGGCTCCAGCTCTTCTTCACCCTAACCCAGATCCGC 60 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 GGGGACCCAGCCGATTCGCCCAGCCACGCCACCGAGCGCTCGTCTCGTCTCGTCTCTCGA 120 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 CCCAATCCCGTCCCCCGGCGCGACGCCCCGCCGCGCGATGGCCGACGGCGCCAGCAGCAG 180 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 CGGGGCCGCCTCGGCCTCCGGCCCCGGTGGCGGGGGCGGCGGGGAGTCGGTGGTGATCGA 240 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 CTACGGCCGGCGCCGCACGGCCTGCGGCTACTGCCGATCCACCGGCCAGACGAGCATCTC 300 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 GCACGGTCTATGGGCTAACAGCCTGAGAGCTGATGACTATCAAGCTCTTCTTGACCGTGG 360 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 GTGGAGGAGATCTGGTTGTTTTCTTTACAAACCTGAGATGGAACGTACTTGCTGTCCTCA 420 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 ATATACAATACGCTTGAAGGCAAATGATTTCATTTGTTCGAAGGAGCAAGGTCGTGTACT 480 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TAAAAAGATGCAAAGGTTCCTTGATGGTGAGCTTGATCCACAGGTTGGAAGTCCACAGAA 540 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TAAAACTAGCCCTACAAAACATTCACTCGCTGAACCTATGAATATGCCGGTCTCAAAAAT 600 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 ATCCAAGACATTAACAAATGATTTTCAAGCAGCCAAATGTCCAAATTTATTTGAAGAAGA 660 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TGAGTTCATCAGTTGCCTGTCTAGCAAAATTAATGAGGCAGTGGGTATGTCCTTCCAAGT 720 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TGGTACATTAGGTTCTGATGTTCAACTCCCTAAAGCTGTTGTAAAGACTGTTAAACCACA 780 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 ACTAAAAAAGAAAGTAGGAGGAGCATCACAAGACAAGAAAGTAGGAGAAGCAGTACAAGA 840 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TTTATTGTACACATGTAATATAAGCTTTCAAATAGTGGCAGAAATCAGACGTGCATTGCC 900 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TAAGGAGAAGGATGCTAATCACAATAAAGTAGTAGCAGATATTTCTCCAAACTCTATTGC 960 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 AGAAAAGCTGGCCATGACAATGGAGTGCCATGGAGATATTGCTGGTTTAGCAGTAAAAGC 1020 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 CTGCAATGGCCATCTGAACTTCTATTCAGTCACCAATCAGACAAAGCAGAACAAAACCAG 1080 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TATCATTGTGTCTACACATGCTCCAGATAAATCTAGTAGCTCAAAGCAAAGCTCTGTGAA 1140 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 CAAAAATACTGTAAGAGTTCCCCAGAAAAGAAGAAAGCTTGAAATTAAAATGAGAAGGTC 1200 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 ACATTTTGATCCTGAGGAGTTTGCTTTATATCAAAGATATCAGACAAAAGTGCACAAGGA 1260 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 GAAGAAAGTTTCAGAAAGCTCATACAAGAGATTTCTAGTGGATACACCAATCGTGTTTGT 1320 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TCCCCCGCGGAGTGGTGATAATACAGTTCCACCTTGTGGATTTGGTTCATTTCACCAGCA 1380 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 GTACAGAATTGATGGAAAACTTGTGGCAGTTGGTGTAGTTGATATCCTTCCTAAGTGCCT 1440 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 GTCAAGCAAGTATTTGTTCTGGGATCCTGACTTTGCTTTCCTATCTCTTGGAAAGTATAC 1500 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 AGCTCTGAAGGAGATAGATTGGGTCAAGACAACACAGGAGCACTGCCCCAACCTTCAATA 1560 consensus_12664#1 ------------------------------------------------------------ consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TTATTATCTTGGTTATTACATACATTCCTGCAATAAGATGAGATACAAAGCTGCGTATCG 1620 consensus_12664#1 -----------------------ATTCCTGCAATAAGATGAGATACAAAGCTGCGTATCG 37 consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 ACCATCAGAACTTCTCTGTCCAGTCCGTTTCGAGTGGGTGTGCTATGACAGTGCCAAACG 1680 consensus_12664#1 ACCATCAGAACTTCTCTGTCCAGTCCGTTTCGAGTGGGTGTGCTATGACAGTGCCAAACG 97 consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TTTACTAGATAAGAGCCTGTATTCTGTCCTATCTGATTTTGCCCAAATACAAGATGAGAT 1740 consensus_12664#1 TTTACTAGATAAGAGCCTGTATTCTGTCCTATCTGATTTTGCCCAAATACAAGATGAGAT 157 consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 GCCTCAGCCACAGAATTCTCATCTTGATACTGAGTTATCAAAAAATGACAATTGTGAGTC 1800 consensus_12664#1 GCCTCAGCCACAGAATTCTCATCTTGATACTGAGTTATCAAAAAATGACAATTGTGAGTC 217 consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TCCCATCGATGAGGATGATGAAGATTTGTCCTATGATGACTCAGACATGATGGTTGATGA 1860 consensus_12664#1 TCCCATCGATGAGGATGATGAAGATTTGTCCTATGATGACTCGGACATGATGGTTGATGA 277 consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 AGAGATGGTTCGATCAGAATCCAACACTGATGTAATGGAGGATTGTTCCAGCATAATTGA 1920 consensus_12664#1 AGAGATGGTTCGATCAGAATCCAACACTGATGTAATGGAGGATTGTTCCAGCATAATTGA 337 consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 TTTTGAAAATGTCATGATGGATCTGAATGGTTCTCGAGTTAAATATAAGGATCTTCTGGG 1980 consensus_12664#1 TTTTGAAAATGTCATGATGGATCTGAATGGTTCTCGAGTTAAATATAAGGATCTTCTGGG 397 consensus_12664#2 ------------------------------------------------------------ consensus_12664#0 AGTCGTTGGACGAATCGAGAGGAGGCACCTCGAACAGCTAGAAAGGCAATTGAGCAAATA 2040 consensus_12664#1 AGTCGTTGGACGAATCGAGAGGAGGCACCTCGAACAGCTAGAAAGGCAATTGAGCAAATA 457 consensus_12664#2 -----------------------------------------AAAGGCAATTGAGCAAATA 19 ******************* consensus_12664#0 CGTGAAAGTTGTAGGGAAGGAGCTATCTGATCGCATGGTTTATTCCCTGTAGTTGGCCTG 2100 consensus_12664#1 CGTGAAAGTTGTAGGGAAGGAGCTATCTGATCGCATGGTTTATTCCCTGTAGTTGGCCTG 517 consensus_12664#2 CGTGAAAGTTGTAGGGAAGGAGCTATCTGATCGCATGGTTTATTCCCTGTAGTTGGCCTG 79 ************************************************************ consensus_12664#0 CAATTCTGTCCCAAGGGAGCAATGCGACCATTTAGAGGTACAATAACATG--TTTATGCT 2158 consensus_12664#1 CAATTCTGTCCCAAGGGAGCAATGCGACCATTTAGAGGTACAATAACATG--TTTATGCT 575 consensus_12664#2 CAATTCTGTCCCAAGGGAACAATGCGACCATTTAGAG-TACAATAACACTGTTTTATGCT 138 ****************** ****************** ********** ******** consensus_12664#0 AATCGCTTCGCAGTCGAATTC-TGGTGGGTTCAGGTT---GGAGGCTGGAATGACAC-AT 2213 consensus_12664#1 AATCGCTTCGCAGTCGAATTC-TGGTGGGTTCAGGTT---GGAGGCTGGAATGACAC-AT 630 consensus_12664#2 AATCGCTTCCCAATCGAATTCCTGGTGGGTTCAAGGTTTGGAAGGCTGGAATGACACCAT 198 ********* ** ******** *********** * * * *************** ** consensus_12664#0 TTTTCC--GGCCGATTCGTTATCTGT--CATTGAAGT-CCGTATTCC-ATAAACTG--TT 2265 consensus_12664#1 TTTTCC--GGCCGATTCGTTATCTGT--CATTGAAGT-CCGTATTCC-ATAAACTG--TT 682 consensus_12664#2 TTTTCCCCGGCGAATCCCTTATCTGTTCCATTGAAATTCCCTATTCCCATAAACTTGTTT 258 ****** *** ** * ******** ******* * ** ****** ******* ** consensus_12664#0 GGCCGAAGGGTATAGCACAAGTCGTTTGGTTTCTGCACATGATTCTACATAAAAATAGCA 2325 consensus_12664#1 GGCCGAAGGGTATAGCACAAGTCGTTTGGTTTCTGCACATGATTCTACATAAAAATAGCA 742 consensus_12664#2 GGCCCAAAGGGTTTTTACCACCAATTT---TCCTTTGTTTTTCCCAAAAAAAAAGGGGGG 315 **** ** ** * ** * *** * ** * * * * **** * consensus_12664#0 CATCTG-TTTCTTGATGAAAAAACTCGAGGACCGCAGGCGTTGAAATGAGAAGAATA--- 2381 consensus_12664#1 CATCTG-TTTCTTGATGAAAAAACTCGAGGACCGCAGGCGTTGAAATGAGAAGAATA--- 798 consensus_12664#2 CCCCGGGTTCCCCAATTCCCCCCCTCTAAATTGAAATTCCCTTTTTTAACAAATTCCCCC 375 * * * ** * ** *** * * * * * * ** consensus_12664#0 TGTGATTTACAGAGTGTCCAACTAAAAAACAGCAAAAAAAA 2422 consensus_12664#1 TGTGATTTACAGAGTA---AAAAAAAAGA------------ 824 consensus_12664#2 TGGGGCCCCCCCCTTTTTTACACACCCTTC----------- 405 ** * * * * * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||