cluster # 12670

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Oryza sativa
cluster # 12670 cluster # 12670 Sequences # 11 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12670#0 length = 1259 sequences # 11
consensusID : consensus_12670#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1259
fasta sequence
                              [ATCATCCAAAGAAAGGAACAGCTGCAACTTTTTTGGTCAGAAAATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCTGATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCTTGAC-GACACTGCGACCCTGATTGGAGAGAAGAA-GGCA-GAAC-AGAATGTCAACTCGCTGAAGGGGTTCGAGCTGGTTGACAAGATCAAGCAGAAGCTGGAAGCTGAGTGCCCTGGAACAGTTTCCTGTGCAGACTTGCTTGCCATTGCAGCGAGGGACGCAGTTGTGCTGGTTGGTGGGCCTTACTGGGATGTCCCAGTTGGAAGATTGGACTCCAAGAAGGCAAGCCTGGACCTAGCAAACAGGGACATTCCCACTGCTCAACAGGGCCTTGTCACCCTCATTGCCAAGTTCTGGGAGAAGGGCCTCGATGCCACTGACATGGTAGCCCTTGTCGGATCCCACACAATCGGATTCGCCCGGTGCGCCAACTTCCGGGACAGGATCTACGGCGACTACGAGATGACGACCAAGTACAGCCCGATCTCCCAGCCCTACCTGAGCAAGCTCAAGGACATCTGCCCCCTGGACGGCGGCGACGACAACATCAGCGCCATGGACAGCCACACCGCCGCCGCCTTCGACAACGCCTACTTCGGGACCCTCGTCAACGGCGAGGGCCTCCTCAACTCCGACCAGGAGATGTGGTCCAGCGTCCTCGGCTACTCCACGGCCGACACCGTCAGCAAGTACTGGGCCGACGCCGACGCCTTCTTCAAGCAGTTCTCCGACTCCATGGTCAAGATGGGCAACATCACCAACCCTGCAGGTGGTGAGGTCAGGAAGAACTGCAGATTTGTCAACACATGATCATATGCATGCTCAATCAAAAGGACTGCACATTTGTTCTTTTTAATTTGATGGCTGGCTTGTCCTAGATAGAAATAAGAAATGCTTTGATGATGAGGCCCTTGTACTGGTACATATAATACGCGTTGTTGTCATTTTGTCATCACTCTACAAGTATGTTACATGGAGATACACATGATAAGGTACNCCTGGCTTTTGCNCAAAAAAAAAA]

[+] EMBL AK060295             [ATCATCCAAAGAAAGGAACAGCTGCAACTTTTTTGGTCAGAAAATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCTGATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCTTGAC GACACTGCGACCCTGATTGGAGAGAAGAA GGCA GAAC AGAATGTCAACTCGCTGAAGGGGTTCGAGCTGGTTGACAAGATCAAGCAGAAGCTGGAAGCTGAGTGCCCTGGAACAGTTTCCTGTGCAGACTTGCTTGCCATTGCAGCGAGGGACGCAGTTGTGCTGGTTGGTGGGCCTTACTGGGATGTCCCAGTTGGAAGATTGGACTCCAAGAAGGCAAGCCTGGACCTAGCAAACAGGGACATTCCCACTGCTCAACAGGGCCTTGTCACCCTCATTGCCAAGTTCTGGGAGAAGGGCCTCGATGCCACTGACATGGTAGCCCTTGTCGGATCCCACACAATCGGATTCGCCCGGTGCGCCAACTTCCGGGACAGGATCTACGGCGACTACGAGATGACGACCAAGTACAGCCCGATCTCCCAGCCCTACCTGAGCAAGCTCAAGGACATCTGCCCCCTGGACGGCGGCGACGACAACATCAGCGCCATGGACAGCCACACCGCCGCCGCCTTCGACAACGCCTACTTCGGGACCCTCGTCAACGGCGAGGGCCTCCTCAACTCCGACCAGGAGATGTGGTCCAGCGTCCTCGGCTACTCCACGGCCGACACCGTCAGCAAGTACTGGGCCGACGCCGACGCCTTCTTCAAGCAGTTCTCCGACTCCATGGTCAAGATGGGCAACATCACCAACCCTGCAGGTGGTGAGGTCAGGAAGAACTGCAGATTTGTCAACACATGATCATATGCATGCTCAATCAAAAGGACTGCACATTTGTTCTTTTTAATTTGATGGCTGGCTTGTCCTAGATAGAAATAAGAAATGCTTTGATGATGAGGCCCTTGTACTGGTACATATAATACGCGTTGTTG                                                                                ]
[+] EMBL CA754909             [       AAAGAAAGGAACAGCTGCAACTTTTTTGGTCAGAAAATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCTGATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCTTGAC GACACTGCGACCCTGATTGGAGAGAAGAA GGCA GAAC AGAATGTCAACTCGCTGAAGGGGTTCGAGCTGGTTGACAAGATCAAGCAGAAGCTGGAAGCTGAGTGCCCTGGAACAGTTTCCTGTGCAGACTTGCTTGCCATTGCAGCGAGGGACGCAATTGTGCTGGTTGGTGGGCCTTACTGGGATGTCCCAGTTGGAAGATTGGACTCCCAGAAGGCAAGCCTGGACCTAGCANACAGGGACATTCCCACTGCTCAACAGGGCCTTGTCACCCTCATTGCCAAGTTCTGGGAGAAag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF326166             [               GAACAGCTGCAACTTTTTTGGTCAGAAAATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSS1240A             [                   AGCTGCAACTTTTTTGGTCAGAAAATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCTGATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCTTGAC GACACTGCGACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSS2539A             [                   cGCTGCAACTTTTTTGGTCAGAAAATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCTGATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCTTGAC GACACTGCGACCCTGATTGGAGAna                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OSS2664A             [                  ccGCTGCAACTTTTTTGGTCAGAAAATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCNNAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCTGATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCTTGACGGACACTTCGACCCTGATTGGAGAAAAGAAGGGCAGGAACAAGAATGTCAACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSS10924A            [                          ACTTTTTTGGTCAGAAAATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTNCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCTGATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCTTGAC GNCACTGCGACCCTGATTGGAGAGAAGAA GGCA GAAC AGAATGTCAACTCGCTGAAGGGGTTCGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU075907             [                              TTTTGGTCAGAAAATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCTGATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCTTGAC GACACTGCGACCCTGATTGGAGAGAAGAA GGCA GAAC AGAATGTCAACTCGCTGAAGGGGTTCGAGCTGGTTGACAAGATCAAGCAGAAGCTGGAAGCTGAGTGCCCTGGAACAGTTTCCTGTGCAGACTTGCTTGCCATTGCAGCGAGGGACGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C20526               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCNACAACGCCTACTTCGGGACCCTCGTCAACGGCNAGGGCCTCCTCAACTCCGACCAGGAGATGTGGTCCAGCGTCCTCGGCTACTCCACGGCCGACACCGTCAGCAAGTACTGGGCCGACGCCGACGCCTTCTTCAANCAGTTCTCCGACTCCATGGTCAAGATGGGCAACATCACCAACCCTGCAGGTGNTGAGGTCAGGAAGAACTGCAGATTTGTCAACACATGATCATATGCATGCTCAATCAAAAGGACTGCACATTTGNTCTTTTTAATTTGATGGCTGGCTTGTCCTAGATAGAAATNAGAAATGCTTTGATGATGAGGCCCTTGTACTGGTACATATAATACNCGTTGTTGTCATTTTGTCATCACTCTACAAGTATGTTACATGGAGATACACATGATAAGGTACNCCTGGCTTTTGCNCAAAAAAAAAA]
[+] EMBL C20511               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTCAACGGCGAGGGCCTCCTCAACTCCGACCAGGAGATGTGGTCCAGCGTCCTCGGNTACTCCACGGCCGACACCGTCAGCAAGTACTGGGCCGACGCCGACGCCTTCTTCAAGCAGTTCTCCGACTCCATGGTCAAGATGGGCAACATCACCAACCCTGCAGGTGGTGAGGTCAGGAAGAACTGCAGATTTGTCAACACATGATCATATGCATGCTCAATCAAAAGGACTGCACATTTGTTCTTTTTAATTTGATGGCTGGCTTGTCCTAGATAGAAATAAGAAATGCTTTGATGATGAGGCCCTTGTACTGGTACATATAATACGCGTTGTTGTCATTTTGTCATCACTCTACAAGTATGTTACGTGGAGAT                                         ]
[+] EMBL C20512               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGTGGTCCAGCGTCNTCGGATACTCCACGGCCGACACCGTCAGCAAGTACTGGGCCGACGCCGACGCTTTCTTCAAGCAGTTCTCCGACTCCATGGTCAAGATGGGCAACATCACCAACCCTGCAGGTGGTGAGGTCAGGAAGAACTGCAGATTTGTCAACACATGATCATATGCATGCTCAATCAAAAGGACTGCACATTTGTTCTTTTTAATTTGATGGCTGGCTTGTCCTAGATAGAAATAAGAAATGCTTTGATGATGAGGCCCTTGTACTGGTACATATAATACGCGTTGTTGTCATTTTGTCATCACTCTACAAGTATGTTACATG                                              ]




>consensus_12670#0
ATCATCCAAAGAAAGGAACAGCTGCAACTTTTTTGGTCAGAAAATGGCTACAGGTGTTCT
GTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGT
GGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGA
GCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCT
GATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCT
TGACGACACTGCGACCCTGATTGGAGAGAAGAAGGCAGAACAGAATGTCAACTCGCTGAA
GGGGTTCGAGCTGGTTGACAAGATCAAGCAGAAGCTGGAAGCTGAGTGCCCTGGAACAGT
TTCCTGTGCAGACTTGCTTGCCATTGCAGCGAGGGACGCAGTTGTGCTGGTTGGTGGGCC
TTACTGGGATGTCCCAGTTGGAAGATTGGACTCCAAGAAGGCAAGCCTGGACCTAGCAAA
CAGGGACATTCCCACTGCTCAACAGGGCCTTGTCACCCTCATTGCCAAGTTCTGGGAGAA
GGGCCTCGATGCCACTGACATGGTAGCCCTTGTCGGATCCCACACAATCGGATTCGCCCG
GTGCGCCAACTTCCGGGACAGGATCTACGGCGACTACGAGATGACGACCAAGTACAGCCC
GATCTCCCAGCCCTACCTGAGCAAGCTCAAGGACATCTGCCCCCTGGACGGCGGCGACGA
CAACATCAGCGCCATGGACAGCCACACCGCCGCCGCCTTCGACAACGCCTACTTCGGGAC
CCTCGTCAACGGCGAGGGCCTCCTCAACTCCGACCAGGAGATGTGGTCCAGCGTCCTCGG
CTACTCCACGGCCGACACCGTCAGCAAGTACTGGGCCGACGCCGACGCCTTCTTCAAGCA
GTTCTCCGACTCCATGGTCAAGATGGGCAACATCACCAACCCTGCAGGTGGTGAGGTCAG
GAAGAACTGCAGATTTGTCAACACATGATCATATGCATGCTCAATCAAAAGGACTGCACA
TTTGTTCTTTTTAATTTGATGGCTGGCTTGTCCTAGATAGAAATAAGAAATGCTTTGATG
ATGAGGCCCTTGTACTGGTACATATAATACGCGTTGTTGTCATTTTGTCATCACTCTACA
AGTATGTTACATGGAGATACACATGATAAGGTACNCCTGGCTTTTGCNCAAAAAAAAAA
clustalw multiple alignements is not computed in this case