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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12676#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2069 fasta sequence
[CGCCGTCCTTCTCCTCTCTCCCCCAATCACCGCCCACGCCACCCACCACCATGGCCTCCTCCGCCTCCGTTTCTCCCGCCGCCGCCTCCCACCACCGCCTCCTCCTCCCCTGCTCCCCGCGCCGCCTCCCCCGCCCCCGCCCCCGCCCTCGCCCGCGCCTCCTCCGCTCCGCCCGCCCCCGCCTCGTCGCCTGCCACGCCGACACCCTCCTCCCCTCCTCGTCCCCCGCCGCCGCCGCCGCCGCGTGCGCCTCCACCGCCTCCGCCAACGGGTTCTCCGACTGGCTGCGGGAGCACGGGCTGCCGCCGGGGAAGGTGGCCATCCTCGACCGACCCGTCCCCTGCTTCCGGGAGGGCAAGGACCTGCCGCTGCACTACGTCGCCGCGGGGCAGGATCTCGAGGCTGGGGATGTGGCGTTCGAGGTGCCCATGTCGCTCGTCGTCACGCTGGAGAGGGTGCTCGGAGACGAGTCCGTCGCTGAATTGCTAACAACAAACAAATTATCTGAGCTGGCATGCTTGGCTTTGTATCTCATGTATGAGAAAAAGCAAGGACAAGATTCATTTTGGTATCCTTACATTAAGGAGCTTGATCGCCAGCGAGGAAGGGGGCAATTAGCTGTTGAATCTCCACTTCTGTGGACCGAAAGTGAACTGAACTACCTGAAGGGTAGCCCCATCAAGGATGAAGTTGTTGCAAGAGACGAGGGAATAAGGCGAGAGTATAATGAGCTCGACACACTGTGGTTCATGGCAGGTTCATTGTTTCAGCAATATCCTTTTGACATACCTACCGAGGCTTTTCCATTTGAGATCTTCAAGCAAGCTTTTGTCGCAGTACAGTCTTGCGTGGTCCATTTGCAGAAAGTTAGTTTAGCTCGAAGATTTGCGCTAGTTCCATTGGGCCCACCACTATTGACCTACAAGAGCAACTGCAAAGCAATGCTGACAGCTGTTGGTGATTCTGTTCGGTTGGTTGTGGATCGACCATACAAAGCGGGAGAACCAATAATCGTCTGGTGTGGGCCACAGCCTAACTCTAGATTGCTCCTCAACTACGGTTTTATTGACGAAGATAATCCATATGATCGTATAGTGATTGAGGCATCCCTAAACATAGAAGATCCTCAGTTCCAAGAGAAGAGAATGGTTGCTCAAAGAAATGGGAAGCTGGCTATCCAAAATTTCCATGTCTGTGTGGGTAAAGAGAAGGAAACAATTGCAGAAATGCTGCCCTATTTGAGGCTAGGATACATTTCAGATCCAGATGAAATGCAATCCATACTTTCTTCAGAAGGTGATACATGTCCAGTCAGTCCATGCACAGAGCGAGCAGTACTTGACCAACTTGTTGGATACTTGGAGTCACGATTGGCTGATTATCCAACAAC-TTTGG-ATGAGG-ATGATGCT-ATGTTGGCAGATGGCAATTT-GGAACCAAAAAAGGAAGTC-GCTACTAGGCTTGTAAGATTGGAGAAGAAATTGTTGCATGGTTGTCTCCAGGCTGCTAATGAGTTCATAAATGATTTGCCTGACCACACTGTGTCACCTTGCCCTGCTCCATTTGCTCCT-GAA-TTGAAATAA-GAAAAGTAAAGCATGCAGCGAGCATTAATTCTTGCAACATGGGTGTCACTTCTAATGGTGTTCTCATTAATGATCACATCCAGTTGAAGTGCATTAGAAGGAAATCTGAAGCCTGGCTGACGGGTGTAATAGGGATTTCACTGCCCGCATGCAGATTTGGCGATTAGTTGCATTGCACACAAGTGTGCACGGATGTTTTGTTAACCTAGTGGCTTTTATATTCACTGAGTAGATTCTGTACATTCTGATGATTGACTGAGATGGTAATGCCAATGTACATGTTCAGTCTCATTTGTCAATANAGATTCTGTACATGTTATATTTTTGGGTGTTGGCATGATTTCCGCCGTTCTCTTTTCATGGCCTGTTTGATTTTTAGCTGTCTGACTACACAGCAGAGAATTGTATGCAACAGTTTACTGTGATGGCTGCCAAGGAATCGCATTCATTTGAAATGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK068145 [CGCCGTCCTTCTCCTCTCTCCCCCAATCACCGCCCACGCCACCCACCACCATGGCCTCCTCCGCCTCCGTTTCTCCCGCCGCCGCCTCCCACCACCGCCTCCTCCTCCCCTGCTCCCCGCGCCGCCTCCCCCGCCCCCGCCCCCGCCCTCGCCCGCGCCTCCTCCGCTCCGCCCGCCCCCGCCTCGTCGCCTGCCACGCCGACACCCTCCTCCCCTCCTCGTCCCCCGCCGCCGCCGCCGCCGCGTGCGCCTCCACCGCCTCCGCCAACGGGTTCTCCGACTGGCTGCGGGAGCACGGGCTGCCGCCGGGGAAGGTGGCCATCCTCGACCGACCCGTCCCCTGCTTCCGGGAGGGCAAGGACCTGCCGCTGCACTACGTCGCCGCGGGGCAGGATCTCGAGGCTGGGGATGTGGCGTTCGAGGTGCCCATGTCGCTCGTCGTCACGCTGGAGAGGGTGCTCGGAGACGAGTCCGTCGCTGAATTGCTAACAACAAACAAATTATCTGAGCTGGCATGCTTGGCTTTGTATCTCATGTATGAGAAAAAGCAAGGACAAGATTCATTTTGGTATCCTTACATTAAGGAGCTTGATCGCCAGCGAGGAAGGGGGCAATTAGCTGTTGAATCTCCACTTCTGTGGACCGAAAGTGAACTGAACTACCTGAAGGGTAGCCCCATCAAGGATGAAGTTGTTGCAAGAGACGAGGGAATAAGGCGAGAGTATAATGAGCTCGACACACTGTGGTTCATGGCAGGTTCATTGTTTCAGCAATATCCTTTTGACATACCTACCGAGGCTTTTCCATTTGAGATCTTCAAGCAAGCTTTTGTCGCAGTACAGTCTTGCGTGGTCCATTTGCAGAAAGTTAGTTTAGCTCGAAGATTTGCGCTAGTTCCATTGGGCCCACCACTATTGACCTACAAGAGCAACTGCAAAGCAATGCTGACAGCTGTTGGTGATTCTGTTCGGTTGGTTGTGGATCGACCATACAAAGCGGGAGAACCAATAATCGTCTGGTGTGGGCCACAGCCTAACTCTAGATTGCTCCTCAACTACGGTTTTATTGACGAAGATAATCCATATGATCGTATAGTGATTGAGGCATCCCTAAACATAGAAGATCCTCAGTTCCAAGAGAAGAGAATGGTTGCTCAAAGAAATGGGAAGCTGGCTATCCAAAATTTCCATGTCTGTGTGGGTAAAGAGAAGGAAACAATTGCAGAAATGCTGCCCTATTTGAGGCTAGGATACATTTCAGATCCAGATGAAATGCAATCCATACTTTCTTCAGAAGGTGATACATGTCCAGTCAGTCCATGCACAGAGCGAGCAGTACTTGACCAACTTGTTGGATACTTGGAGTCACGATTGGCTGATTATCCAACAAC TTTGG ATGAGG ATGATGCT ATGTTGGCAGATGGCAATTT GGAACCAAAAAAGGAAGTC GCTACTAGGCTTGTAAGATTGGAGAAGAAATTGTTGCATGGTTGTCTCCAGGCTGCTAATGAGTTCATAAATGATTTGCCTGACCACACTGTGTCACCTTGCCCTGCTCCATTTGCTCCT GAA TTGAAATAA GAAAAGTAAAGCATGCAGCGAGCATTAATTCTTGCAACATGGGTGTCACTTCTAATGGTGTTCTCATTAATGATCACATCCAGTTGAAGTGCATTAGAAGGAAATCTGAAGCCTGGCTGACGGGTGTAATAGGGATTTCACTGCCCGCATGCAGATTTGGCGATTAGTTGCATTGCACACAAGTGTGCACGGATGTTTTGTTAACCTAGTGGCTTTTATATTCACTGAGTAGATTCTGTACATTCTGATGATTGACTGAGATGGTAATGCCAATGTACATGTTCAGT ]
[+] EMBL CF304854 [ TCGCTCGTCGTCACGCTGGAGAGGGTGCTCGGAGACGAGTCCGTCGCTGAATTGCTAACAACAAACAAATTATCTGAGCTGGCATGCTTGGCTTTGTATCTCATGTATGAGAAAAAGCAAGGACAAGATTCATTTTGGTATCCTTACATTAAGGAGCTTGATCGCCAGCGAGGAAGGGGGCAATTAGCTGTTGAATCTCCACTTCTGTGGACCGAAAGTGAACTGAACTACCTGAAGGGTAGCCCCATCAAGGATGAAGTTGTTGCAAGAGACGAGGGAATAAGGCGAGAGTATAATGAGCTCGACACACTGTGGTTCATGGCAGGTTCATTGTTTCAGCAATATCCTTTTGACATACCTACCGAGGCTTTTCCATTTGAGATCTTCAAGCAAGCTTTTGTCGCAGTACAGTCTTGCGTGGTCCATTTGCAGAAAGTTAGTTTAGCTCGAAGATTTGCGCTAGTTCCATTGGGCCCACCACTATTGACCTACAAGAGCAACTGCAAAGCAATGCTGACAGCTGTTGGTGATTCTGTTCGGTTGGTTGTGGATCGACCATACAAAGCGGGAGAACCAATAATCGTCTGGTGTGGGCCACAGCCTAACTCTAGATTGCTCCTCAACTACGGTTTTATTGACGAAGATAATCCATATGATCGTATAGTGAT ]
[+] EMBL CB653989 [ CTCGTAGTGACGCTGGAGAGGGTGCTCGGAGACGAGTCCGTCGCTGAATTGCTAACAACCAACAAATTATCTGAGCTGGCATGCTTGGCTTTGTATCTCATGTATGAGAAAAAGCAACGACAAGATTCATTTTGGTATCCTTACATTAACGAGCTTGATCGCCAGCGAGGAAGGGGGCAATTAGCTGTTGAATCTCCACTTCTGTGGACCGAAAGTGAACTGAACTACCTGAAGGGTACCCCCATCAAGGATGAAGTTGTTGCGAGAGACGAGGGAATAAGGCGAGAGTATAATGAGCTCGACACACTGTGGTTCATGGCAGGTTCCTTGTTTCAGCCATATCCTTTTGACATACCTACCGAGGCTTTTCCATTTGAGATCTTCAAGCAAGCTTTTGTCGCAGTACAGTCTTGCGTGGTCCATTTGCAGAAAGTTAGTTTAGCTCGAAGATTTGCGCTAGTTCCATTGGGCCCACCACTATT ]
[+] EMBL CA757390 [ CTGTTGAATCTCCACTTCTGTGGACCGAAAGTGAACTGAACTACCTGAAGGGTAGCCCCATCAAGGATGAAGTTGTTGCAAGAGACGAGGGAATAAGGCGAGAGTATAATGAGCTCGACACACTGTGGTTCATGGCAGGTTCATTGTTTCAGCAATATCCTTTTGACATACCTACCGAGGCTTTTCCATTTGAGATCTTCAAGCAAGCTTTTGTCGCAGTACAGTCTTGCGTGGTC ]
[-] EMBL CB653990 [ AGTGATTGAGGCATCCCTAAACATAGAAGATCCTCAGTTCCAAGAGAAGAGAATGGTTGCTCAAAGAAATGGGAAGCTGGCTATCCAAAATTTCCATGTCTGTGTGGGTAAAGAGAAGGAAACAATTGCAGAAATGCTGCCCTATTTGAGGCTAGGATACATTTCAGATCCAGATGAAATGCAATCCATACTTTCTTCAGAAGGTGATACATGTCCAGTCAGTCCATGCACAGAGCGAGCAGTACTTGACCAACTTGTTGGATACTTGGAGTCACGATTGGCTGATTATCCAACAAC TTTGG ATGAGG ATGATGCT ATGTTGGCAGATGGCAATTT GGAACCAAAAAAGGAAGTC GCTACTAGGCTTGTAAGATTGGAGAAGAAATTGTTGCATGGTTGTCTCCAGGCTGCTAATGAGTTCATAAATGATTTGCCTGACCACACTGTGTCACCTTGCCCTGCTCCATTTGCTCCT GAA TTGAAATAA GAAAAGTAAAGCATGCAGCGAGCATTAATTCTTGCAACATGGGTGTCACTTCTAATGGTGTTCTCATTAATGATCACATCCAGTTGAAGTGCATTAGAAGGAAATCTGAAGCCTGGCTGACGGGTGTAATAGGGATTTCACTGCCCGCATGCAGATTTGGCGATTAGTTGCATTGCACACAAGTGTGCACGGATGTTTTGTTAACCTAGTGGCTTTTATATTCACTGAGTAGATTCTGTACATTCTGATGATTGACTGAAAGGGTAATGCCAATGTACATGTTCAGTCTCATTTG ]
[+] EMBL OSR18691A [ CCCTAAACATAGAAGATCCTCAGTTCCAAGAGAAGAGAATGGTTNCTCAAAGAAATGGGAAGCTGGCTATCCAAAATTTCCATGTCTGTGTGGGTAAAGAGAAGGAAACAATTGCAGAAATGCTGCCCTATTTGAGGCTAGGATACATTTCAGATCCAGATGAAATGCAATCCATACTTTCTTCAGAAGGTGATACATGTCCAGTCAGTCCATGCACAGAGCGAGCAGTACTTGACCAACTTGTTGGATACTTGGAGTCACGATTGGCTGATTATCCAACAAC TTTGG ATGAGG ATGATGCT ATGTTGGCAGATGGCAATTT GGAACCAAAAAAGGAAGTC GCTACTAGGCTTGTAAGATTGGAGAAGAAATTGTTGCATGGTNGTCTCCAGGCTGCTAATGAGTTCATAAATGA ]
[+] EMBL OSR25781A [ CCCTAAACATAGAAGATCCTCAGTTCCAAGAGAAGAGAATGGTTGCTCAAAGAAATGGGAAGCTGGCTATCCAAAATTTCCATGTCTGTGTGGGTAAAGAGAAGGAAACAATTGCAGAAATGCTGCCCTATTTGAGGCTAGGATACATTTCAGATCCAGATGAAATGCAATCCATACTTTCTTCAGAAGGTGATACATGTCCAGTCAGTCCATGCACAGAGCGAGCAGTACTTGACCAACTTGTTGGATACTTGGAGTCACGATTGGCTGATTATCCAACAAC TTTGG ATGAGG ATGATGCT ATGTTGGCAGATGGCAATTT GGNNCCAAAA ]
[+] EMBL C73489 [ ACTTNCTTCAGAAGGTGATACATGTCCAGTCAGTCCATGCACAGAGCGAGCAGTACTTGACCAACTTGTTGGATACTTGGAGTCACGNTTGGCTGATTATCCAACAAC TNTGG ATGAGG ATGATGCT ATGTTNGCAGATGGCAATTT GGAACCAAAAAAGGAAGTC GCTACTAGGCTTGTAAGATTGGNGAAGANATTGTTGCATGGTTGTCTCCAGGCTGCTAATGAGTTCATAAATGATTTNCCTGACCACACTGTGTCACCTTGCCCTGCTCCATTTGCTCCTGGAATTTGAAATAAGGANAAGTAAAGCATtgc ]
[+] EMBL AU165726 [ CCAACAACTTTTGGAATGAGGAATGATGCTAATGTTGCCAAATGCCAATTTNGNACCCAAAAAAGGAAGTCGGCTACTAGGCTTGTAAGATTGNAAAAGAAATTGTTGCATGGTTGTCTCCAGGCTGCTAATGAGTTCATAAATGATTTGCCTGACCACACTGTGTCACCTTGCCCTGCTCCATTTGCTCCT GAA TTGAAATAA GAAAAGTAAAGCATGCAGCGAGCATTAATTCTTGCAACATGGGTGTCACTTCTAATGGTGTTCTCATTAATGATCACATCCAGTTGAAGTGCATTAGAAGGAAATNTGAAGCCTGGCTGACGGGTGTAATAGGGATTTCACTGCCCGCATGCAGATTTGGCGATTAGTTGCATTGCACACAAGTGTGCACGGATGTTTTGTTAACCTAGTGGCTTTTATATTCACTGAGTAGATTCTGTACATTCTGATGATTGACTGAGATGGTAATGCCAATGTACATGTTCAGTCTCATTTGTCAATANAGATTCTGTACATGTTATATTTTTGGGTGTTGGCATGATTTCCGCCGTTCTCTTTTCATGGCCTGTTTGATTTTTAGCTGTCTGACTACACAGCAGAGAATTGTATGCAACAGTTTACTGTGATGGCTGCCAAGGAATCGCATTCATTTGAAATGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU162353 [ GAGCATTAATTCTTGCAACATGGGTGTCACTTCTAATGGTGTTCTCATTAATGATCACATCCAGTTGAAGTGCATTAGAAGGAAATCTGAAGCCTGGCTGACGGGTGTAATANGGATTTCACTGCCCGCATGCAGATTTGGCGATTAGTTNCATTGCACACAAGTGTGCACGGATGTTTTGTTAACCTANTGGCTTTTATATTCACTGANNAGATTCTGTACATTCTGATGATTGACTGAGATGGTAATGCCAATGTAC ]
[+] EMBL AU031398 [ CGGATGTTTTGTTAACCTAGTGGCTTTTATATTCACTGNGTAGATTCTGTACATTCTGATGATTGACTGAGNTGGTAATGCCNATGTACATGTTCAGTCTCATTTGTCAATAGAGATTCTGTACNTGTTATATTTTTGGGTGTTGGCATGATTTCCGCCGTTCTCTTTTCATGGCCTGTTTGATTTTTAGCTGTCTGACTACACAGCAGAGAATTGTATGCAACAGTTTACTGTGATGGCTGCCAAGGAATCGNATTCATTTGANATGCTCCAAAAAAAAAAAAAAAAAAAAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||