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Oryza sativa
cluster # 12683 cluster # 12683       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12683#0 length = 2142 sequences # 10  
consensus_12683#1 length = 103 sequences # 1  

consensusID : consensus_12683#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2142
fasta sequence
                              [GACTCTGGACCTCTCCTCTCCACGCCGACCGCCATGGCCGCCGCCGCCGAGGTCGACGCGGCCCCCGACCTCCCCAACGGATCCTCCGCCACCGCCACAACCGACAAGAAGAAGTCGCGGGAGAGCGAGCGCCGCCGCCGCCGCCGCAAGCAGAAGAAGAACAAGGCCGCGTCCAACGCCGCAGATGCGGATGCGGCCGGGGACGCCGGGGCCGACGACGACGCCGCCGAGGAGAAGCCTGATGTCAAACCCCAGGTGGAGGTGGAGGTGGAGTACGTCCCGGAGCAGGCGGACCTGGACGACGGCCTCCTCGCCGACTTCAAGAGCATCTTCGACAAGTTCACCTTCAAGGATTCCTCTGCCGACGCCGAGGATGACGAGAAGAAAGATGAGGCTGGCACTGATGCCGCAAAGAAGGCTGCAGGGTCTGATTCGGACGACGACGAGCAGGGGACACAGCAAAAGAAGGAAGGGGGCTTGTCCAACAAGCAAAAGAAACTACAACGAAGGATGAAGATTGCAGAACTGAAACAGATATGCAATAGACCTGATGTTGTGGAGGTCTGGGATGCAACGGCATCGGATCCATCATTACTTGTCTATCTGAAGTCCTACAGGAACACTGTACCTGTCCCAAGGCATTGGTGTCAAAAGCGCAAATTCTTGCAGGGTAAGCGAGGTATCGAGAAACAACCTTTTCAACTCCCTGACTTCATCGCTGCAACTGGAATAGAAAAAATAAGACAGGCATATATTGAGAAGGAGGATAGTAAAAAGTTGAAACAAAAGCAGCGGGAGCGTATGCAACCAAAAATGGGCAAGATGGATATAGATTATCAGGTCTTGCATGACGCCTTCTTCAAATACCAAACAAAGCCAAAATTGACTAGTCATGGTGACCTGTATTATGAAGGGAAAGAGTTTGAGGTCAAGCTTAGGGAAATGAAGCCAGGCATGCTGTCGCGAGAACTTAAAGAGGCTCTTGGTATGCCTGATGGTGCGCCACCTCCATGGCTTATAAACATGCAGAGATATGGTCCTCCGCCCTCTTATCCTCAGCTGAAGATTCCTGGGCTAAATGCTCCGATTCCTCCTGGTGCTAGCTTCGGATACCGACCTGGGGAATGGGGAAAACCTCCTGTTGATGAGCATGGGCGCCCCTTATATGGAGATGTTTTTGGAGTCCTACAGCAGGATGAACCTAATTATGATGAAGAACCTGTTGATCGCAGCAAGCACTGGGGAGACTTGGAGGAGG-AAGAGGAGGAGGAGGAAGAA-GAGGAGGAAGAGGAGGAAGAAGAGCCAATGGAAGATGAAGACATGGAAGACGGCATGCAATCTGTTGACACCATCTCAAGCACTCCAACTGGTGTGGAAACACCTGATGTGATTGATCTTCGGAAGCTGCAGCGGAAAGAGCCTGAAAAGCAGACCGAGAAGCAACTATACCAGATTCTTGAGCAAAAAGAAGAAAGAATTGCTCCTGGGGCTATCTATGGATCAAGCCATACGTATGCGATTGGTGCACAGGATAAGGCTGGTCCTAAAAGGGTGGATCTTCTCAAGAATCAGAAGTCTGATAAGGTGGATGTCACCATACAACCTGAGGAGCTTGAAGTTATGGATGATGTTTTGGCTGCCAAGTACGAGGAAGCCCGGGAGGAGGAGAAGCTACGGAACCAGAAGGAAGATTTCAGCGACATGGTGGCGGAGAACGCAAGCAAGAGGAAGAGGAAGCAGGAGAAGGACGGGAAGTCGAAGAAGAAAGACTTCAAGTTCTAGATGTTGCCCTTTGCGAGTTAGCCAGATCCAAGGAAGAGGAGGCGGCACGGCATCCATCTGTTTTTTTAGATTGCCCTTGTCTGAGAATAGATGAATGCGTAGGCACGAGTGTAGCAGCAGCACAGCCCTTTTTTATGTGTGTGTGTATTGTATGACTGATGGCCTTCACCTTGATATGATGATGATGTTTACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTTCACATACTAGTAACATCTTCTTAGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCGGCCAGGCCGTTACGTAGCGAATGG]

[+] EMBL AK069159             [GACTCTGGACCTCTCCTCTCCACGCCGACCGCCATGGCCGCCGCCGCCGAGGTCGACGCGGCCCCCGACCTCCCCAACGGATCCTCCGCCACCGCCACAACCGACAAGAAGAAGTCGCGGGAGAGCGAGCGCCGCCGCCGCCGCCGCAAGCAGAAGAAGAACAAGGCCGCGTCCAACGCCGCAGATGCGGATGCGGCCGGGGACGCCGGGGCCGACGACGACGCCGCCGAGGAGAAGCCTGATGTCAAACCCCAGGTGGAGGTGGAGGTGGAGTACGTCCCGGAGCAGGCGGACCTGGACGACGGCCTCCTCGCCGACTTCAAGAGCATCTTCGACAAGTTCACCTTCAAGGATTCCTCTGCCGACGCCGAGGATGACGAGAAGAAAGATGAGGCTGGCACTGATGCCGCAAAGAAGGCTGCAGGGTCTGATTCGGACGACGACGAGCAGGGGACACAGCAAAAGAAGGAAGGGGGCTTGTCCAACAAGCAAAAGAAACTACAACGAAGGATGAAGATTGCAGAACTGAAACAGATATGCAATAGACCTGATGTTGTGGAGGTCTGGGATGCAACGGCATCGGATCCATCATTACTTGTCTATCTGAAGTCCTACAGGAACACTGTACCTGTCCCAAGGCATTGGTGTCAAAAGCGCAAATTCTTGCAGGGTAAGCGAGGTATCGAGAAACAACCTTTTCAACTCCCTGACTTCATCGCTGCAACTGGAATAGAAAAAATAAGACAGGCATATATTGAGAAGGAGGATAGTAAAAAGTTGAAACAAAAGCAGCGGGAGCGTATGCAACCAAAAATGGGCAAGATGGATATAGATTATCAGGTCTTGCATGACGCCTTCTTCAAATACCAAACAAAGCCAAAATTGACTAGTCATGGTGACCTGTATTATGAAGGGAAAGAGTTTGAGGTCAAGCTTAGGGAAATGAAGCCAGGCATGCTGTCGCGAGAACTTAAAGAGGCTCTTGGTATGCCTGATGGTGCGCCACCTCCATGGCTTATAAACATGCAGAGATATGGTCCTCCGCCCTCTTATCCTCAGCTGAAGATTCCTGGGCTAAATGCTCCGATTCCTCCTGGTGCTAGCTTCGGATACCGACCTGGGGAATGGGGAAAACCTCCTGTTGATGAGCATGGGCGCCCCTTATATGGAGATGTTTTTGGAGTCCTACAGCAGGATGAACCTAATTATGATGAAGAACCTGTTGATCGCAGCAAGCACTGGGGAGACTTGGAGGAGG AAGAGGAGGAGGAGGAAGAA GAGGAGGAAGAGGAGGAAGAAGAGCCAATGGAAGATGAAGACATGGAAGACGGCATGCAATCTGTTGACACCATCTCAAGCACTCCAACTGGTGTGGAAACACCTGATGTGATTGATCTTCGGAAGCTGCAGCGGAAAGAGCCTGAAAAGCAGACCGAGAAGCAACTATACCAGATTCTTGAGCAAAAAGAAGAAAGAATTGCTCCTGGGGCTATCTATGGATCAAGCCATACGTATGCGATTGGTGCACAGGATAAGGCTGGTCCTAAAAGGGTGGATCTTCTCAAGAATCAGAAGTCTGATAAGGTGGATGTCACCATACAACCTGAGGGGCTTGAAGTTATGGATGATGTTTTGGCTGCCAAGTACGAGGAAGCCCGGGAGGAGGAGAAGCTACGGAACCAGAAGGAAGATTTCAGCGACATGGTGGCGGAGAACGCAAGCAAGAGGAAGAGGAAGCAGGAGAAGGACGGGAAGTCGAAGAAGAAAGACTTCAAGTTCTAGATGTTGCCCTTTGCGAGTTAGCCAGATCCAAGGAAGAGGAGGCGGCACGGCATCCATCTGTTTTTTTAGATTGCCCTTGTCTGAGAATAGATGAATGCGTAGGCACGAGTGTAGCAGCAGCACAGCCCTTTTTTATGTGTGTGTGTATTGTATGACTGATGGCCTTCACCTTGATATGATGATGATGTTTACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACG                                                                                                                            ]
[+] EMBL CB645287             [                TCTCCACGCCGACCGCCATGGCCGCCGCCGCCGAGGTCGACGCGGCCCCCGACCTCCCCAACGGATCCTCCGCCACCGCCACAACCGACAAGAAGAAGTCGCGGGAGAGCGAGCGCCGCCGCCGCCGCCGCAAGCAGAAGAAGAACAAGGCCGCGTCCAACGCCGCAGATGCGGATGCGGCCGGGGACGCCGGGGCCGACGACGACGCCGCCGAGGAGAAGCCTGATGTCAAACCCCAGGTGGAGGTGGAGGTGGAGTACGTCCCGGAGCAGGCGGACCTGGACGACGGCCTCCTCGCCGACTTCAAGAGCATCTTCGACAAGTTCACCTTCAAGGATTCCTCTGCCGACGCCGAGGATGACGAGAAGAAAGATGAGGCTGGCACTGATGCCGCAAAGAAGGCTGCAGGGTCTGATTCGGACGACGACGAGCAGGGGACACAGCAAAAGAAGGAAGGGGGCTTGTCCAACAAGCAAAAGAAACTACAACGAAGGATGAAGATTGCAGAACTGAAACAGATATGCAATAGACCTGATGTTGTGGAGGTCTGGGATGCAACGGCATCGGATCCATCATTACTTGTCTATCTGAAGTCCTACAGGAACACTGTACCTGTCCCAAGGCATTGGTGTCAAAAGCGCAAATTCTTGCAGGGTAAGCGAGGTATCGAGAAACAACCTTTTCAACTCCCTGACTTCATCGCTGCAACTGGAATAGAAAAAATAAGACAGGCATATATTGAGAAGGAGGATAGTAAAAAGTTGAAACAAAAGCAGCGGGAGCGTATGNCACCAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB628624             [                     ACGCCGACCGCCATGGCCGCCGCCGCCGAGGTCGACGCGGCCCCCGACCTCCCCAACGGATCCTCCGCCACCGCCACAACCGACAAGAAGAAGTCGCGGGAGAGCGAGCGCCGCCGCCGCCGCCGCAAGCAGAAGAAGAACAAGGCCGCGTCCAACGCCGCAGATGCGGATGCGGCCGGGGACGCCGGGGCCGACGACGACGCTTCCGAGGAGAAGCCTGATGTCAAACCCCAGGTGGAGGTGGAGGTGGAGTACGTCCCGGAGCAGGCGGACCTGGACGACGGCCTCCTCGCCGACTTCAAGAGCATCTTCGACAAGTTCACCTTCAAGGATTCCTCTGCCGACGCCGAGGATGACGAGAAGAAAGATGAGGCTGGCACTGATGCCGCAAAGAAGGCTGCAGGGTCTGATTCGGACGACGACGAGCAGGGGACACAGCAAAAGAAGGAAGGGGGCTTGTCCAACAAGCAAAAGAAACTACAACGAAGGATGAAGATTGCAGAACTGAAACAGATATGCAATAGACCTGATGTTGTGGAGGTCTGGGATGCAACGGCATCGGATCCATCATTACTTGTCTATCTGAAGTCCTACAGGAACACTGTACCTGTCCCAAGGCATTGGTGTCAAAAGCGCAAATTCTTGCAGGGTAAGCGAGGTATCGAGAAACAACCTTTTCAACTCCCTGACTTCATCGCTGCAACTGGAATAGAAAAAATAAGACAGGCATATATTGAGAAGGAGGATAGTAAAAAGTTGAAAACAAAGCAGCGGGAGCGTATGCAACCAAAAATGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU067915             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTCTTGGTATGCCTGATGGTGCGCCACCTCCATGGCTTATAAACATGCAGAGATATGGTCCTCCGCCCTCTTATCCTCAGCTGAAGATTCCTGGGCTAAATGCTCCGATTCCTCCTGGTGCTAGCTTCGGATACCGACCTGGGGAATGGGGAAAACCTCCTGTTGATGAGCATGGGCGCCCCTTATATGGAGATGTTTTTGGAGTCCTACAGCAGGATGAACCTAATTATGATGAAGAACCTGTTGATCGCAGCAAGCACTGGGGAGACTTGGAGGAGGAAAGAGGAGGAGGAGGAAGAACGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI978419             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCTGTTGATGAGCATGGGCGCCCCTTATATGGAGATGTTTTTGGAGTCCTACAGCAGGATGAACCTAATTATGATGAAGAACCTGTTGATCGCAGCAAGCACTGGGGAGACTTGGAGGAGG AA   GAGGAGGAGGAAGAA GAGGAGGAAGAGGAGGAAGAAGAGCCAATGGAAGATGAAGACATGGAAGACGGCATGCAATCTGTTGACACCATCTCAAGCACTCCAACTGGTGTGGAAACACCTGATGTGATTGATCTTCGGAAGCTGCAGCGGAAAGAGCCTGAAAAGCAGNCCGAGAAGCAACTATACCAGATTCTTGAGCAAAAAGAAGAAAGAATTGCTCCTGGGGCTATCTATGGATCAAGCCATANNNATGNGATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB628625             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           agGAAGAGGAGGAGGAAGAA GAGGAGGAAGAGGAGGAAGAAGAGCCAATGGAAGATGAAGACATGGAAGACGGCATGCAATCTGTTGACACCATCTCAAGCACTCCAACTGGTGTGGAAACACCTGATGTGATTGATCTTCGGAAGCTGCAGCGGAAAGAGCCTGAAAAGCAGACCGAGAAGCAACTATACCAGATTCTTGAGCAAAAAGAAGAAAGAATTGCTCCTGGGGCTATCTATGGATCAAGCCATACGTATGCGATTGGTGCACAGGATAAGGCTGGTCCTAAAAGGGTGGATCTTCTCAAGAATCAGAAGTCTGATAAGGTGGATGTCACCATACAACCTGAGGAGCTTGAAGTTATGGATGATGTTTTGGCTGCCAAGTACGAGGAAGCCCGGGAGGAGGAGAAGCTACGGAACCAGAAGGAAGATTTCAGCGACATGGTGGCGGAGAACGCAAGCAAGAGGAAGAGGAAGCAGGAGAAGGACGGGAAGTCGAAGAAGAAAGACTTCAAGTTCTAGATGTTGCCCTTTGCGAGTTAGCCAGATCCAAGGAAGAGGAGGCGGCACGGCATCCATCTGTTTTTTTAGATTGCCCTTGTCTGAGAATAGATGAATGCGTAGGCACGAGTGTAGCAGCAGCACAGCCCTTTTTTATGTGTGTGTGTATTGTATGACTGATGGCCTTCACCTTGATATGATGATGATGTTTACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTTCACAT                                                                                                              ]
[-] EMBL CB645288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGAGGAGGAGGAAGAA GAGGAGGAAGAGGAGGAAGAAGAGCCAATGGAAGATGAAGACATGGAAGACGGCATGCAATCTGTTGACACCATCTCAAGCACTCCAACTGGTGTGGAAACACCTGATGTGATTGATCTTCGGAAGCTGCAGCGGAAAGAGCCTGAAAAGCAGACCGAGAAGCAACTATACCAGATTCTTGAGCAAAAAGAAGAAAGAATTGCTCCTGGGGCTATCTATGGATCAAGCCATACGTATGCGATTGGTGCACAGGATAAGGCTGGTCCTAAAAGGGTGGATCTTCTCAAGAATCAGAAGTCTGATAAGGTGGATGTCACCATACAACCTGAGGAGCTTGAAGTTATGGATGATGTTTTGGCTGCCAAGTACGAGGAAGCCCGGGAGGAGGAGAAGCTACGGAACCAGAAGGAAGATTTCAGCGACATGGTGGCGGAGAACGCAAGCAAGAGGAAGAGGAAGCAGGAGAAGGACGGGAAGTCGAAGAAGAAAGACTTCAAGTTCTAGATGTTGCCCTTTGCGAGTTAGCCAGATCCAAGGAAGAGGAGGCGGCACGGCATCCATCTGTTTTTTTAGATTGCCCTTGTCTGAGAATAGATGAATGCGTAGGCACGAGTGTAGCAGCAGCACAGCCCTTTTTTATGTGTGTGTGTATTGTATGACTGATGGCCTTCACCTTGATATGATGATGATGTTTACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTTCACAaaaaaaaga                                                                                                      ]
[-] EMBL AI978420             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      atnnATGNTGTTTTNNNTGCCAAGTACGANNNNGCCCGGNNGGAGGAGAAGCTACGGAACCAGAAGGAAGATTTCAGCGACATGGTGGCGGAGAACGCAAGCAAGAGGAAGAGGAAGCAGGAGAAGGACGGGAAGTCGAAGAAGAAAGACTTCAAGTTCTAGATGTTGCCCTTTGCGAGTTAGCCAGATCCAAGGAAGAGGAGGCGGCACGGCATCCATCTGTTTTTTTAGATTGCCCTTGTCTGAGAATAGATGAATGCGTAGGCACGAGTGTAGCAGCAGCACAGCCCTTTTTTATGTGTGTGTGTATTGTATGACTGATGGCCTTCACCTTGATATGATGATGATGTTTACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTT                                                                                                                          ]
[+] EMBL CF308620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     gagtagaaaAGGAGGAGAAGCTACGGAACCAGAAGGAAGATTTCAGCGACATGGTGGCGGAGAACGCAAGCAATAGGAAGAGGAAGCAGGAGAAGGACGGGAAGTCGAAGAAGAAAGACTTCAAGTTCTAGATGTTGCCCTTTGCGAGTTAGCCAGATCCAAGGAAGAGGAGGCGGCACGGCATCCATCTGTTTTTTTAGATTGCCCTTGTCTGAGAATAGATGAATGCGTAGGCACGAGTGTAGCAGCAGCACAGCCCTTTTTTATGTGTGTGTGTATTGTATGACTGATGGCCTTCACCTTGATATGATGATGATGTTTACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTTCACATACTAGTAACATCTTCTTA                                                                                            ]
[+] EMBL CF331594             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGTATTGTATGACTGATGGCCTTCACCTTGATATGATGATGATGTTTACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTTCACATACTAGTAACATCTTCTTAGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCGGCCAGGCCGTTACGTAGCGAATGG]


>consensus_12683#0 GACTCTGGACCTCTCCTCTCCACGCCGACCGCCATGGCCGCCGCCGCCGAGGTCGACGCG GCCCCCGACCTCCCCAACGGATCCTCCGCCACCGCCACAACCGACAAGAAGAAGTCGCGG GAGAGCGAGCGCCGCCGCCGCCGCCGCAAGCAGAAGAAGAACAAGGCCGCGTCCAACGCC GCAGATGCGGATGCGGCCGGGGACGCCGGGGCCGACGACGACGCCGCCGAGGAGAAGCCT GATGTCAAACCCCAGGTGGAGGTGGAGGTGGAGTACGTCCCGGAGCAGGCGGACCTGGAC GACGGCCTCCTCGCCGACTTCAAGAGCATCTTCGACAAGTTCACCTTCAAGGATTCCTCT GCCGACGCCGAGGATGACGAGAAGAAAGATGAGGCTGGCACTGATGCCGCAAAGAAGGCT GCAGGGTCTGATTCGGACGACGACGAGCAGGGGACACAGCAAAAGAAGGAAGGGGGCTTG TCCAACAAGCAAAAGAAACTACAACGAAGGATGAAGATTGCAGAACTGAAACAGATATGC AATAGACCTGATGTTGTGGAGGTCTGGGATGCAACGGCATCGGATCCATCATTACTTGTC TATCTGAAGTCCTACAGGAACACTGTACCTGTCCCAAGGCATTGGTGTCAAAAGCGCAAA TTCTTGCAGGGTAAGCGAGGTATCGAGAAACAACCTTTTCAACTCCCTGACTTCATCGCT GCAACTGGAATAGAAAAAATAAGACAGGCATATATTGAGAAGGAGGATAGTAAAAAGTTG AAACAAAAGCAGCGGGAGCGTATGCAACCAAAAATGGGCAAGATGGATATAGATTATCAG GTCTTGCATGACGCCTTCTTCAAATACCAAACAAAGCCAAAATTGACTAGTCATGGTGAC CTGTATTATGAAGGGAAAGAGTTTGAGGTCAAGCTTAGGGAAATGAAGCCAGGCATGCTG TCGCGAGAACTTAAAGAGGCTCTTGGTATGCCTGATGGTGCGCCACCTCCATGGCTTATA AACATGCAGAGATATGGTCCTCCGCCCTCTTATCCTCAGCTGAAGATTCCTGGGCTAAAT GCTCCGATTCCTCCTGGTGCTAGCTTCGGATACCGACCTGGGGAATGGGGAAAACCTCCT GTTGATGAGCATGGGCGCCCCTTATATGGAGATGTTTTTGGAGTCCTACAGCAGGATGAA CCTAATTATGATGAAGAACCTGTTGATCGCAGCAAGCACTGGGGAGACTTGGAGGAGGAA GAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGGAAGAAGAGCCAATGGAAGATGAAGAC ATGGAAGACGGCATGCAATCTGTTGACACCATCTCAAGCACTCCAACTGGTGTGGAAACA CCTGATGTGATTGATCTTCGGAAGCTGCAGCGGAAAGAGCCTGAAAAGCAGACCGAGAAG CAACTATACCAGATTCTTGAGCAAAAAGAAGAAAGAATTGCTCCTGGGGCTATCTATGGA TCAAGCCATACGTATGCGATTGGTGCACAGGATAAGGCTGGTCCTAAAAGGGTGGATCTT CTCAAGAATCAGAAGTCTGATAAGGTGGATGTCACCATACAACCTGAGGAGCTTGAAGTT ATGGATGATGTTTTGGCTGCCAAGTACGAGGAAGCCCGGGAGGAGGAGAAGCTACGGAAC CAGAAGGAAGATTTCAGCGACATGGTGGCGGAGAACGCAAGCAAGAGGAAGAGGAAGCAG GAGAAGGACGGGAAGTCGAAGAAGAAAGACTTCAAGTTCTAGATGTTGCCCTTTGCGAGT TAGCCAGATCCAAGGAAGAGGAGGCGGCACGGCATCCATCTGTTTTTTTAGATTGCCCTT GTCTGAGAATAGATGAATGCGTAGGCACGAGTGTAGCAGCAGCACAGCCCTTTTTTATGT GTGTGTGTATTGTATGACTGATGGCCTTCACCTTGATATGATGATGATGTTTACTTTACT GGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTTCACATACTAGTAA CATCTTCTTAGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAACCCGGCCAGGCCGTTACGTAGCGAATGG



consensusID : consensus_12683#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 103
fasta sequence
                              [TGTTTACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTCCACATACTAGTATCATCATCTTAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA765997             [TGTTTACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTCCACATACTAGTATCATCATCTTAAAAAAAAAAAAAAAAAAAAA]


>consensus_12683#1 TGTTTACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTC CACATACTAGTATCATCATCTTAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12683#0      GACTCTGGACCTCTCCTCTCCACGCCGACCGCCATGGCCGCCGCCGCCGAGGTCGACGCG 60
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GCCCCCGACCTCCCCAACGGATCCTCCGCCACCGCCACAACCGACAAGAAGAAGTCGCGG 120
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GAGAGCGAGCGCCGCCGCCGCCGCCGCAAGCAGAAGAAGAACAAGGCCGCGTCCAACGCC 180
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GCAGATGCGGATGCGGCCGGGGACGCCGGGGCCGACGACGACGCCGCCGAGGAGAAGCCT 240
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GATGTCAAACCCCAGGTGGAGGTGGAGGTGGAGTACGTCCCGGAGCAGGCGGACCTGGAC 300
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GACGGCCTCCTCGCCGACTTCAAGAGCATCTTCGACAAGTTCACCTTCAAGGATTCCTCT 360
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GCCGACGCCGAGGATGACGAGAAGAAAGATGAGGCTGGCACTGATGCCGCAAAGAAGGCT 420
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GCAGGGTCTGATTCGGACGACGACGAGCAGGGGACACAGCAAAAGAAGGAAGGGGGCTTG 480
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      TCCAACAAGCAAAAGAAACTACAACGAAGGATGAAGATTGCAGAACTGAAACAGATATGC 540
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      AATAGACCTGATGTTGTGGAGGTCTGGGATGCAACGGCATCGGATCCATCATTACTTGTC 600
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      TATCTGAAGTCCTACAGGAACACTGTACCTGTCCCAAGGCATTGGTGTCAAAAGCGCAAA 660
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      TTCTTGCAGGGTAAGCGAGGTATCGAGAAACAACCTTTTCAACTCCCTGACTTCATCGCT 720
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GCAACTGGAATAGAAAAAATAAGACAGGCATATATTGAGAAGGAGGATAGTAAAAAGTTG 780
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      AAACAAAAGCAGCGGGAGCGTATGCAACCAAAAATGGGCAAGATGGATATAGATTATCAG 840
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GTCTTGCATGACGCCTTCTTCAAATACCAAACAAAGCCAAAATTGACTAGTCATGGTGAC 900
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      CTGTATTATGAAGGGAAAGAGTTTGAGGTCAAGCTTAGGGAAATGAAGCCAGGCATGCTG 960
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      TCGCGAGAACTTAAAGAGGCTCTTGGTATGCCTGATGGTGCGCCACCTCCATGGCTTATA 1020
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      AACATGCAGAGATATGGTCCTCCGCCCTCTTATCCTCAGCTGAAGATTCCTGGGCTAAAT 1080
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GCTCCGATTCCTCCTGGTGCTAGCTTCGGATACCGACCTGGGGAATGGGGAAAACCTCCT 1140
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GTTGATGAGCATGGGCGCCCCTTATATGGAGATGTTTTTGGAGTCCTACAGCAGGATGAA 1200
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      CCTAATTATGATGAAGAACCTGTTGATCGCAGCAAGCACTGGGGAGACTTGGAGGAGGAA 1260
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGGAAGAAGAGCCAATGGAAGATGAAGAC 1320
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      ATGGAAGACGGCATGCAATCTGTTGACACCATCTCAAGCACTCCAACTGGTGTGGAAACA 1380
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      CCTGATGTGATTGATCTTCGGAAGCTGCAGCGGAAAGAGCCTGAAAAGCAGACCGAGAAG 1440
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      CAACTATACCAGATTCTTGAGCAAAAAGAAGAAAGAATTGCTCCTGGGGCTATCTATGGA 1500
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      TCAAGCCATACGTATGCGATTGGTGCACAGGATAAGGCTGGTCCTAAAAGGGTGGATCTT 1560
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      CTCAAGAATCAGAAGTCTGATAAGGTGGATGTCACCATACAACCTGAGGAGCTTGAAGTT 1620
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      ATGGATGATGTTTTGGCTGCCAAGTACGAGGAAGCCCGGGAGGAGGAGAAGCTACGGAAC 1680
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      CAGAAGGAAGATTTCAGCGACATGGTGGCGGAGAACGCAAGCAAGAGGAAGAGGAAGCAG 1740
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GAGAAGGACGGGAAGTCGAAGAAGAAAGACTTCAAGTTCTAGATGTTGCCCTTTGCGAGT 1800
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      TAGCCAGATCCAAGGAAGAGGAGGCGGCACGGCATCCATCTGTTTTTTTAGATTGCCCTT 1860
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GTCTGAGAATAGATGAATGCGTAGGCACGAGTGTAGCAGCAGCACAGCCCTTTTTTATGT 1920
consensus_12683#1      ------------------------------------------------------------
                                                                                   

consensus_12683#0      GTGTGTGTATTGTATGACTGATGGCCTTCACCTTGATATGATGATGATGTTTACTTTACT 1980
consensus_12683#1      -----------------------------------------------TGTTTACTTTACT 13
                                                                      *************

consensus_12683#0      GGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTTCACATACTAGTAA 2040
consensus_12683#1      GGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTCCACATACTAGTAT 73
                       ********************************************** ************ 

consensus_12683#0      CATCTTCTTAGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2100
consensus_12683#1      CATCATCTTA-----AAAAAAAAAAAAAAAAAAAA------------------------- 103
                       **** *****     ********************                         

consensus_12683#0      AAAAAAAAAAAAAACCCGGCCAGGCCGTTACGTAGCGAATGG 2142
consensus_12683#1      ------------------------------------------
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)