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Oryza sativa
cluster # 12687 cluster # 12687       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12687#0 length = 1235 sequences # 7  
consensus_12687#1 length = 785 sequences # 2  
consensus_12687#2 length = 538 sequences # 2  

consensusID : consensus_12687#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1235
fasta sequence
                              [TGGACTGAAGGAGTAGAAAGCATCCATCGCTTCTCCTCCGTATCCTCCTCC-GATAGCGGCGGCTGCCTCGCCTTCTCCGACGAGCTCCACCGCCGAGTCGCCGCCCCTTGCCAGGACAGGATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACGCCCTCGTCTCCCACTACAGCGGCGACCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCATCCACCCATTGTTTGTCACCTGGAAGAAGGCTACCAATGGTTCAGAACCACGCCTTCGAGGATGCATTGGAACCTTGGAGGCTCGTCAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGCCGCTTTCCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTACAGTATCTATACTGACCGAATATGAAACTGCACTTAACCACCTTGACTGGGAGGTGGGTAAGCATGGGTTAATTATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCATTGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAAAGGGGAAGCTATGACAGCATATCCCCTAAATTATGCCGCCTGGACAAACAGTGGTGAATTAGTTATGTATCTTGCAAAAATTATGGGCTTCCGGTGCCCAAAAAATGATGGCATGAATTGATTCAAGCTGCTTTGTTACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN]

[+] EMBL CF333153             [TGGACTGAAGGAGTAGAAAGCATCCATCGCTTCTCCTCCGTATCCTCCTCC GATAGCGGCGGCTGCCTCGCCTTCTCCGACGAGCTCCACCGCCGAGTCGCCGCCCCTTGCCAGGACAGGATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACGCCCTCGTCTCCCACTACAGCGGCGACCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCATCCACCCATTGTTTGTCACCTGGAAGAAGGCTACCAATGGTTCAGAACCACGCCTTCGAGGATGCATTGGAACCTTGGAGGCTCGTCAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGCCGCTTTCCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTGCAGTATCTATACTGACCGAATATGAAACTGCACTTAACCACCTTGACTGGGAGGTGGGTAAGCATGGGTTAATTATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCATTGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF308477             [                        CATCGCTTCTCCTCCGTATCCTCCTCC GATAGCGGTGGCTGCCTCGCCTTCTCCGACGAGCTCCACCGCCGAGTCGCCGCCCCTTGCCAGGACAGGATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACGCCCTCGTCTCCCACTACAGCGGCGACCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCATCCACCCATTGTTTGTCACCTGGAAGAAGGCTACCAATGGTTCAGAACCACGCCTTCGAGGATGCATTGGAACCTTGGAGGCTCGTCAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGCCGCTTTCCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTACAGTATCTATACTGACCGAATATGAAACTGCACTTAACCACCTTGACTGGGAGGTGGGTAAGCATGGGTTAATTATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCATTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF332089             [                              TTCTCCTCCGTATCCTCCTCC GATAGCGGCGGCTGCCTCGCCTTCTCCGACGAGCTCCACCGCCGAGTCGCCGCCCCTTGCCAGGACAGGATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACGCCCTCGTCTCCCACTACAGCGGCGACCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCATCCACCCATTGTTTGTCACCTGGAAGAAGGCTACCAATGGTTCAGAACCACGCCTTCGAGGATGCATTGGAACCTTGGAGGCTCGTCAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGCCGCTTTCCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTACAGTATCTATACTGACCGAATATGAAACTGCACTTAACCACCTTGACTGGGAGGTGGGTAAGCATGGGTTAATTATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCATTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK069018             [                                    TCCGTATCCTCCTCCAGATAGCGGCGGCTGCCTCGCCTTCTCCGACGAGCTCCACCGCCGAGTCGCCGCCCCTTGCCAGGACAGGATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACGCCCTCGTCTCCCACTACAGCGGCGACCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCATCCACCCATTGTTTGTCACCTGGAAGAAGGCTACCAATGGTTCAGAACCACGCCTTCGAGGATGCATTGGAACCTTGGAGGCTCGTCAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGCCGCTTTCCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTACAGTATCTATACTGACCGAATATGAAACTGCACTTAACCACCTTGACTGGGAGGTGGGTAAGCATGGGTTAATTATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCATTGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAAAGGGGAAGCTATGACAGCATATCCCCTAAATTATGCCGCCTGGACAAACAGTGGTGAATTAGTTATGTATCTTGCAAAAATTATGGGCTTCCGGTGCCCAAAAAATGATGGCATGAATTGATTCAAGCTGC                                                                                                                                                                                                             ]
[+] EMBL C72479               [                                      CGTATCCTCCTCCAGATAGCGGCGGCTGCCTCGCCTTCTCCGACGAGCTCCACCGCCGAGTCGCCGCCCCTTGCCAGGACAGGATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACGCCCTCGTCTCCCACTACAGCGGCGACCAG CGACGCCGCCCGCCTTCGAGGAGGGCATCCACCCATTGTTTGTCACCTGGAAGAAGGCTACCAATGGTTCAGAACCACGCCTTCGAGGATGCATTGGAACCTTGGAGGCTCGTCAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGCCGCTTTCCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTACAGTATCTATACTGACCGAATATGAAACTGCACTTAACCANCTTGACTGGGAGGTGGGTAAGCATGGGTTAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CF308478             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGGTAAGCATGGGTTAATTATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCATTGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAAAGGGGAAGCTATGACAGCATATCCCCTAAATTATGCCGCCTGGACAAACAGTGGTGAATTAGTTATGTATCTTGCAAAAATTATGGGCTTCCGGTGCCCAAAAAATGATGGCATGAATTGATTCAAaaaa                                                                                                                                                                                                              ]
[+] EMBL CA755745             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAAAGGGGAAGCTATGACAGCATATCCCCTAAATTATGCCGCCTGGACAAACAGTGGTGAATTAGTTATGTATCTTGCAAAAATTATGGGCTTCCGGTGCCCAAAAAATGATGGCATGAATTGATTCAAGCTGCTTTGTTACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN]


>consensus_12687#0 TGGACTGAAGGAGTAGAAAGCATCCATCGCTTCTCCTCCGTATCCTCCTCCGATAGCGGC GGCTGCCTCGCCTTCTCCGACGAGCTCCACCGCCGAGTCGCCGCCCCTTGCCAGGACAGG ATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACGCCCTCGTCTCCCACTAC AGCGGCGACCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCATCCACCCATTGTTTGTCACC TGGAAGAAGGCTACCAATGGTTCAGAACCACGCCTTCGAGGATGCATTGGAACCTTGGAG GCTCGTCAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGC CGCTTTCCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTACAGTATCTATACTG ACCGAATATGAAACTGCACTTAACCACCTTGACTGGGAGGTGGGTAAGCATGGGTTAATT ATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTT GCTGCCCATGAAGGATGGACACATCTAGAGACCATTGACTCACTGATGAGGAAGGCAGGT TACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGT ACCTTGTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGCT GCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATC TGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATTT GTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAAA GGGGAAGCTATGACAGCATATCCCCTAAATTATGCCGCCTGGACAAACAGTGGTGAATTA GTTATGTATCTTGCAAAAATTATGGGCTTCCGGTGCCCAAAAAATGATGGCATGAATTGA TTCAAGCTGCTTTGTTACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN



consensusID : consensus_12687#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 785
fasta sequence
                              [CGCCTTCGAGGATGCATTGGAACCTTGGAGGCTCGTCAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGCCGCTTTCCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTACAGTATCTATACTGACCGAATATGAAACTGCACTTAACCACCTTGACTGGGAGGTATGCAACTACACATTGGTTTTAGTCGTTTTTTCACTCTCTTCTAATAATCTTGTGGTACTGCAGGTGGGTAAGCATGGGTTAATTATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCATTGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAAAGGGGAAGCTATGACAGCATATCCCCTAAATTATGCCGCCTGGACAAACAGTGGTGAATTAGTTATGTATCTTGCAAAAAAAAAAAAAAA]

[+] EMBL CF653634             [CGCCTTCGAGGATGCATTGGAACCTTGGAGGCTCGTCAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGCCGCTTTCCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTACAGTATCTATACTGACCGAATATGAAACTGCACTTAACCACCTTGACTGGGAGGTATGCAACTACACATTGGTTTTAGTCGTTTTTTCACTCTCTTCTAATAATCTTGTGGTACTGCAGGTGGGTAAGCATGGGTTAATTATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCATTGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTATC                                                                                                                                                                             ]
[-] EMBL CF333154             [                                                                                                                                                                                                                                                                        CATGGGTTAATTATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCATTGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAAAGGGGAAGCTATGACAGCATATCCCCTAAATTATGCCGCCTGGACAAACAGTGGTGAATTAGTTATGTATCTTGCAAAAAAAAAAAAAAA]


>consensus_12687#1 CGCCTTCGAGGATGCATTGGAACCTTGGAGGCTCGTCAGATTGTCACTGGCTTCAAGGAG TATGCGCTCACAAGTGCATTGAGGGACCGCCGCTTTCCTCCTATACAGTCGAAAGAACTG CCGTATTTGGAGTGTACAGTATCTATACTGACCGAATATGAAACTGCACTTAACCACCTT GACTGGGAGGTATGCAACTACACATTGGTTTTAGTCGTTTTTTCACTCTCTTCTAATAAT CTTGTGGTACTGCAGGTGGGTAAGCATGGGTTAATTATTGAATTCACTGATCCAGACTAT AACATGAGGCGCAGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACAT CTAGAGACCATTGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCT TTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGT GAATACGCTGCCTACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCT ATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACT TTATAATTTATCTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCC GCTCATTGATATGCCATCATTTTCATTCGAAAGAAAGGGGAAGCTATGACAGCATATCCC CTAAATTATGCCGCCTGGACAAACAGTGGTGAATTAGTTATGTATCTTGCAAAAAAAAAA AAAAA



consensusID : consensus_12687#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 538
fasta sequence
                              [AGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCACTTGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGTGAATACGCTGCATACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAAAGGGTAAGCTATGACAGCATATCCCCTAAATTATGCTGCCTGGACAAACAGTGGTGAATTGGTTATGTATCTTGCAAAAATTATGGGCTTCCGGTGCCCAAAAAATGATGGCATGAATTGATTCAAGCTGCTTTGTTACCCCAAAAAAAAAAAA]

[+] EMBL BQ908233             [AGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCACTTGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGTGAATACGCTGCATACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAAAGGGTAAGCTATGACAGCATATCCCCTAAATTATGCTGCCTGGACAAACAGTGGTGAATTGGTTATGTATCTTGCAAAAATTATGGGCTTCCGGTGCCCAAAAAATGATGGCATGAATTGATTCAAGCTGCTTTGTTACCCCAAAAAAAAAA  ]
[+] EMBL AU172522             [                                                                                                  TAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAAAGGGGAAGCTATGACAGCATATCCCCTAAATTATGCCGCCTGGACAAACAGTGGTGAATTAGTTATGTATCTTGCAAAAATTATGGGCTTCCGGTGCCCAAAAAATGATGGCATGAATTGATTCAAGCTGCTTTGTTACCCAAAATAAAAAAAA]


>consensus_12687#2 AGTGCAACTTATTTACCTGAGGTTGCTGCCCATGAAGGATGGACACATCTAGAGACCACT TGACTCACTGATGAGGAAGGCAGGTTACAATGGTACCATAACCGACTCTTTGAGGAAGAA ACTCCGTGTCACCCGCTACCAGAGTACCTTGTACACTATGCACTATGGTGAATACGCTGC ATACGTCAAGAAGAACAGAGGAGCTGCACCAGAAATTAACGGGGCACCTATAATTAATGG CTTCAAACCAGGCCATTGAATCATCTGTATTGCATCATCTAAAATGACTTTATAATTTAT CTGGGAGCACCTGGGGTGAGAATTTGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATA TGCCATCATTTTCATTCGAAAGAAAGGGTAAGCTATGACAGCATATCCCCTAAATTATGC TGCCTGGACAAACAGTGGTGAATTGGTTATGTATCTTGCAAAAATTATGGGCTTCCGGTG CCCAAAAAATGATGGCATGAATTGATTCAAGCTGCTTTGTTACCCCAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12687#0      TGGACTGAAGGAGTAGAAAGCATCCATCGCTTCTCCTCCGTATCCTCCTCCGATAGCGGC 60
consensus_12687#2      ------------------------------------------------------------
consensus_12687#1      ------------------------------------------------------------
                                                                                   

consensus_12687#0      GGCTGCCTCGCCTTCTCCGACGAGCTCCACCGCCGAGTCGCCGCCCCTTGCCAGGACAGG 120
consensus_12687#2      ------------------------------------------------------------
consensus_12687#1      ------------------------------------------------------------
                                                                                   

consensus_12687#0      ATGGTGGTGGCCACGGAGGAAATGGCGGTCTACTGCTTCGACGCCCTCGTCTCCCACTAC 180
consensus_12687#2      ------------------------------------------------------------
consensus_12687#1      ------------------------------------------------------------
                                                                                   

consensus_12687#0      AGCGGCGACCAGCCGCCGCCGCCCGCCTTCGAGGAGGGCATCCACCCATTGTTTGTCACC 240
consensus_12687#2      ------------------------------------------------------------
consensus_12687#1      ------------------------CGCCTTCGAGGATGCATTGGAACCTTGGAGGCTCGT 36
                                                                                   

consensus_12687#0      TGGAAGAAGGCTACCAATGGTTCAGAACCACGCCTTCGAGGATGCATTGGAACCTTGGAG 300
consensus_12687#2      ------------------------------------------------------------
consensus_12687#1      CAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGCCGCTTT 96
                                                                                   

consensus_12687#0      GCTCGTCAGATTGTCACTGGCTTCAAGGAGTATGCGCTCACAAGTGCATTGAGGGACCGC 360
consensus_12687#2      ------------------------------------------------------------
consensus_12687#1      CCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTACAGTATCTATACTGACCGAA 156
                                                                                   

consensus_12687#0      CGCTTTCCTCCTATACAGTCGAAAGAACTGCCGTATTTGGAGTGTACAGTATCTATACTG 420
consensus_12687#2      ------------------------------------------------------------
consensus_12687#1      TATGAAACTGCACTTAACCACCTTGACTGGGAGGTATGCAACTACACATTGGTTTTAGTC 216
                                                                                   

consensus_12687#0      ACCGAATATGAAACTGCACTTAACCACCTTGACTGGGAGGTGGGTAAGCATGGGTTAATT 480
consensus_12687#2      ------------------------------------------------------------
consensus_12687#1      GTTTTTTCACTCTCTTCTAATAATCTTGTGGTACTGCAGGTGGGTAAGCATGGGTTAATT 276
                                                                                   

consensus_12687#0      ATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTT 540
consensus_12687#2      ------------------------------------AGTGCAACTTATTTACCTGAGGTT 24
consensus_12687#1      ATTGAATTCACTGATCCAGACTATAACATGAGGCGCAGTGCAACTTATTTACCTGAGGTT 336
                                                           ************************

consensus_12687#0      GCTGCCCATGAAGGATGGACACATCTAGAGACCA-TTGACTCACTGATGAGGAAGGCAGG 599
consensus_12687#2      GCTGCCCATGAAGGATGGACACATCTAGAGACCACTTGACTCACTGATGAGGAAGGCAGG 84
consensus_12687#1      GCTGCCCATGAAGGATGGACACATCTAGAGACCA-TTGACTCACTGATGAGGAAGGCAGG 395
                       ********************************** *************************

consensus_12687#0      TTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAG 659
consensus_12687#2      TTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAG 144
consensus_12687#1      TTACAATGGTACCATAACCGACTCTTTGAGGAAGAAACTCCGTGTCACCCGCTACCAGAG 455
                       ************************************************************

consensus_12687#0      TACCTTGTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGC 719
consensus_12687#2      TACCTTGTACACTATGCACTATGGTGAATACGCTGCATACGTCAAGAAGAACAGAGGAGC 204
consensus_12687#1      TACCTTGTACACTATGCACTATGGTGAATACGCTGCCTACGTCAAGAAGAACAGAGGAGC 515
                       ************************************ ***********************

consensus_12687#0      TGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCAT 779
consensus_12687#2      TGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCAT 264
consensus_12687#1      TGCACCAGAAATTAACGGGGCACCTATAATTAATGGCTTCAAACCAGGCCATTGAATCAT 575
                       ************************************************************

consensus_12687#0      CTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATT 839
consensus_12687#2      CTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATT 324
consensus_12687#1      CTGTATTGCATCATCTAAAATGACTTTATAATTTATCTGGGAGCACCTGGGGTGAGAATT 635
                       ************************************************************

consensus_12687#0      TGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAA 899
consensus_12687#2      TGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAA 384
consensus_12687#1      TGTTTGGAAAACTCCACCCCTTGCCGCTCATTGATATGCCATCATTTTCATTCGAAAGAA 695
                       ************************************************************

consensus_12687#0      AGGGGAAGCTATGACAGCATATCCCCTAAATTATGCCGCCTGGACAAACAGTGGTGAATT 959
consensus_12687#2      AGGGTAAGCTATGACAGCATATCCCCTAAATTATGCTGCCTGGACAAACAGTGGTGAATT 444
consensus_12687#1      AGGGGAAGCTATGACAGCATATCCCCTAAATTATGCCGCCTGGACAAACAGTGGTGAATT 755
                       **** ******************************* ***********************

consensus_12687#0      AGTTATGTATCTTGCAAAAATTATGGGCTTCCGGTGCCCAAAAAATGATGGCATGAATTG 1019
consensus_12687#2      GGTTATGTATCTTGCAAAAATTATGGGCTTCCGGTGCCCAAAAAATGATGGCATGAATTG 504
consensus_12687#1      AGTTATGTATCTTGCAAAAAAAAAAAAAAA------------------------------ 785
                        *******************  *                                     

consensus_12687#0      ATTCAAGCTGCTTTGTTACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1079
consensus_12687#2      ATTCAAGCTGCTTTGTTACCCCAAAAAAAAAAAA-------------------------- 538
consensus_12687#1      ------------------------------------------------------------
                                                                                   

consensus_12687#0      NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1139
consensus_12687#2      ------------------------------------------------------------
consensus_12687#1      ------------------------------------------------------------
                                                                                   

consensus_12687#0      NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1199
consensus_12687#2      ------------------------------------------------------------
consensus_12687#1      ------------------------------------------------------------
                                                                                   

consensus_12687#0      NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1235
consensus_12687#2      ------------------------------------
consensus_12687#1      ------------------------------------
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)