cluster # 12690

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Oryza sativa
cluster # 12690 cluster # 12690 Sequences # 11 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12690#0 length = 928 sequences # 6
consensus_12690#1 length = 756 sequences # 2

consensus_12690#2 length = 694 sequences # 1
consensus_12690#3 length = 639 sequences # 1
consensus_12690#4 length = 613 sequences # 1

consensusID : consensus_12690#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 928
fasta sequence

                              [ACTGAAGGAGTAGAAAACTATTTCCTTCCCCCTTTTCCCGTCGCGTTCGATTCGATTCGCATCGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCGAATCGCGGCGAGCGGCGGCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCAGAAGGAGCTGACGGAGTGCAACCGGGACAGGGAGGTCTCCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTCCCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGC-GGCACCTTCGTCATCGACATCCGCCT-CCCAGGTGGTTACCCCTTT-GAGCCTCCTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAATTCCTCCACCGGCATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTG-AGGCCCTATAAGCCGATATGAACTGTAAATTGAATCCCCATTCGTTATAAGACAACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTATGACACTCTTCTATATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAGTTCGGTNATTTTTTTAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF318839             [ACTGAAGGAGTAGAAAACTATTTCCTTCCCCCTTTTCCCGTCGCGTTCGATTCGATTCGCATCGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCGAATCGCGGCGAGCGGCGGCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCACAAGGAGCTGACTGTTTGTTTCCGGGACAGGGAGGTCTTCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTCCCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACAAGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF332651             [                       CCTTCCCCCTTTTCCCGTCGCGTTCGATTCGATTCGCATCGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCTAATCGCGGCGAGCGGCGGCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCAGAAGGAGCTGACGGAGTGCAACCGGGACAGGGAGGTCTCCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTCCCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGC GGCACCTTCGTCATCGACATCCGCCT CCCAGGTGGTTACCCCTTT GAGCCTCCTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK073357             [                                                  TTCGATTCGCATCGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCGAATCGCGGCGAGCGGCGGCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCAGAAGGAGCTGACGGAGTGCAACCGGGACAGGGAGGTCTCCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTCCCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGC GGCACCTTCGTCATCGACATCCGCCT CCCAGGTGGTTACCCCTTT GAGCCTCCTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAATTCCTCCACCGGCATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTG AGGCCCTATAAGCCGATATGAACTGTAAATTGAATCCCCATTCGTTATAAGACAACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTATGACACTCTTCTATATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAGT                                   ]
[+] EMBL AU164467             [                                                             TCGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCGAATCGCGGCGAGCGGCGGCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCAGAAGGAGCTGACGGAGTGCAACCGGGACAGGGAGGTCTCCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTCCCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGCGGGCACCTTCGTCATCGACATCCGCCT CCCAGGTGGTTACCCCTTT GAGCCTCCTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAATTCCTCCACCGGCATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTG AAGCCCTATAAGCCGATATGAACTG                                                                                                                                                                                        ]
[+] EMBL AU031604             [                                                                                                                                                                                                                                              TCACCGGNACCATCGCCGGGCCCCAAGGCACNCCCTACGAGGGC GGCACCTTCGTCATCGACATCCGCCTCCCCAGGTGGTTACCCCTTTGGAG CTCCTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAATTCCTCCACCGGCATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTG AGGCCCTATAAGCCGATATGAACTGTAAATTGAATCCCCATTCGTTATAAGACAACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTATGACACTCTTCTATATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAGTTCGGTNATTTTTTTAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU029250             [                                                                                                                                                                                                                                                                                 TACGAGGGC GGCACCTTCGTCATCGACATCCGCCT CCCAGGTGGTTACCCCTTT GAGCCTCCTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAATTCCTCCACCGGNATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTGAAGGCCCTATAAGCC                                                                                                                                                                                                   ]




>consensus_12690#0
ACTGAAGGAGTAGAAAACTATTTCCTTCCCCCTTTTCCCGTCGCGTTCGATTCGATTCGC
ATCGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCGAATCGCGGCGAGCGGCG
GCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCAGAAGGAGCTGACGGAGTGCAACCGG
GACAGGGAGGTCTCCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTCCCACCTC
ACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGCGGCACCTTCGTCATCGAC
ATCCGCCTCCCAGGTGGTTACCCCTTTGAGCCTCCTAAGATGCAGTTTATCACCAAAGTA
TGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAA
TGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCC
CCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCC
ACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAATTCCTCCACCGGC
ATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGT
GTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTGA
GGCCCTATAAGCCGATATGAACTGTAAATTGAATCCCCATTCGTTATAAGACAACAGTGC
TTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTATGACACTCTTCTATATAGGGG
ATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAGTTCGGTNA
TTTTTTTAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12690#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 756
fasta sequence

                              [GGAGTAGAAAGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCGAATCGCGGCGAGCGGCGGCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCAGAAGGAGCTGACGGAGTGCAACCGGGACAGGGAGGTCTCCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTCCCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGCGGCACCTTCGTCATCGACATCCGCCTCCCAGGTGGTTACCCCTTTGAGCCTCCTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAATTCCTCCACCGGCATGGAAGAAAAGGTGCAGAAGNTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGAATCCCCATTCGTTATAAGACAACAGTGCTTGCTAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF335472             [GGAGTAGAAAGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCGAATCGCGGCGAGCGGCGGCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCAGAAGGAGCTGACGGAGTGCAACCGGGACAGGGAGGTCTCCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTCCCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGCGGCACCTTCGTCATCGACATCCGCCTCCCAGGTGGTTACCCCTTTGAGCCTCCTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAATTCCTCCA                                                                                                                                                                                                                      ]
[+] EMBL AU029251             [                                                                                                                                                                                                                   GGCACGCCCTACGAGGGCGGCA CTTCGTCATCGACATCCGCCTCCCAGGTGGTTACCCCTTTGAGCCTCCTAAGATNCAGTTTATCCCCAAAGTNTGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGANCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTNCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAATTCCTCCACCGGCATGGAAGAAAAGGTGCAGAAGNTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGAATCCCCATTCGTTATAAGACAACAGTGCTTGCTAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12690#1
GGAGTAGAAAGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCGAATCGCGGCG
AGCGGCGGCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCAGAAGGAGCTGACGGAGTG
CAACCGGGACAGGGAGGTCTCCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTC
CCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGCGGCACCTTCGT
CATCGACATCCGCCTCCCAGGTGGTTACCCCTTTGAGCCTCCTAAGATGCAGTTTATCAC
CAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAA
GGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCT
TTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCGTGA
CTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAATTCCTC
CACCGGCATGGAAGAAAAGGTGCAGAAGNTGGTTGAGATGGGCTTCCCTGAAGACATGGT
GAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTC
TGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGAATCCCCATTCGTTATAAGACA
ACAGTGCTTGCTAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12690#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence

                              [TTTTTTTTTTTTGGGACAAATTCACTAGAATTTTCATTTATGATTGGAGCAACACCAGAAATTCCCAAGTTCAGGACATGCTCGGAACTTACAGGTTTAAGGAATCAGTGTCAAGCTTGTCTTCTGATCATTATGTCTGTTTTCATCCATTTTTGCAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAGTTCCTCCACCGGCATGGAAGAAAAGGTATTGTTATTGACGAGTACTCATATTTATTGTTCCAGTGGGTATACAGAAGTTGTAGATACCGTAGTAAAATACTCCATTCTGCAATCACAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGATCCCCATTCGTTATAAGACAACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTATGACACTCTTCTACATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAGTTCGGNCATTTTTTTTATGGTTTCTTCCTATCATCCGNGGGCCTGAAGTAACGGGATTGTGTCAGGGTTGCCC]

[+] EMBL CA763134             [TTTTTTTTTTTTGGGACAAATTCACTAGAATTTTCATTTATGATTGGAGCAACACCAGAAATTCCCAAGTTCAGGACATGCTCGGAACTTACAGGTTTAAGGAATCAGTGTCAAGCTTGTCTTCTGATCATTATGTCTGTTTTCATCCATTTTTGCAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAGTTCCTCCACCGGCATGGAAGAAAAGGTATTGTTATTGACGAGTACTCATATTTATTGTTCCAGTGGGTATACAGAAGTTGTAGATACCGTAGTAAAATACTCCATTCTGCAATCACAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGATCCCCATTCGTTATAAGACAACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTATGACACTCTTCTACATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAGTTCGGNCATTTTTTTTATGGTTTCTTCCTATCATCCGNGGGCCTGAAGTAACGGGATTGTGTCAGGGTTGCCC]




>consensus_12690#2
TTTTTTTTTTTTGGGACAAATTCACTAGAATTTTCATTTATGATTGGAGCAACACCAGAA
ATTCCCAAGTTCAGGACATGCTCGGAACTTACAGGTTTAAGGAATCAGTGTCAAGCTTGT
CTTCTGATCATTATGTCTGTTTTCATCCATTTTTGCAGTACTTGCGTGACTATTCCACAT
TTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAGTTCCTCCACCGGCATGG
AAGAAAAGGTATTGTTATTGACGAGTACTCATATTTATTGTTCCAGTGGGTATACAGAAG
TTGTAGATACCGTAGTAAAATACTCCATTCTGCAATCACAGGTGCAGAAGCTGGTTGAGA
TGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACA
TGGCTCTTGAGAAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTG
GATCCCCATTCGTTATAAGACAACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTG
TGGCTTTATGACACTCTTCTACATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGA
ACCTATCCTAACTTGACAGAGTTCGGNCATTTTTTTTATGGTTTCTTCCTATCATCCGNG
GGCCTGAAGTAACGGGATTGTGTCAGGGTTGCCC

consensusID : consensus_12690#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 639
fasta sequence

                              [CAGAGGACGAGACAAGGGGGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACCTGCGTGACTATTCCACATTTTTTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAGTTCCCCCACCGGCATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTTTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGATCCCCCTTCGTTATAAGACAACAGTGCTTGCTAATGCTCCTGTTTTGCCATTTAAGTGTGGCTTTATGACCCTTTTCTATATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAGTTCGGTCATTTTTTTTATGGTTTCTTCCTATCATCCGTGGGCCTGAAGTAACGGGATTGTGTCAGGTTTGCCCCATGAAAAAAAAAAAA]

[-] EMBL CA763133             [CAGAGGACGAGACAAGGGGGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAGTACCTGCGTGACTATTCCACATTTTTTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAGTTCCCCCACCGGCATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTTTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGATCCCCCTTCGTTATAAGACAACAGTGCTTGCTAATGCTCCTGTTTTGCCATTTAAGTGTGGCTTTATGACCCTTTTCTATATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAGTTCGGTCATTTTTTTTATGGTTTCTTCCTATCATCCGTGGGCCTGAAGTAACGGGATTGTGTCAGGTTTGCCCCATGAAAAAAAAAAAA]




>consensus_12690#3
CAGAGGACGAGACAAGGGGGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTG
GACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTC
CAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTCAGGATGCTGTCGTTGCACAACAG
TACCTGCGTGACTATTCCACATTTTTTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCA
AAGAGTTCCCCCACCGGCATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCT
GAAGACATGGTGAGAAGTGTTTTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAG
AAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGATCCCCCTTC
GTTATAAGACAACAGTGCTTGCTAATGCTCCTGTTTTGCCATTTAAGTGTGGCTTTATGA
CCCTTTTCTATATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAA
CTTGACAGAGTTCGGTCATTTTTTTTATGGTTTCTTCCTATCATCCGTGGGCCTGAAGTA
ACGGGATTGTGTCAGGTTTGCCCCATGAAAAAAAAAAAA

consensusID : consensus_12690#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 613
fasta sequence

                              [AGGCCGAGACAAGGGGTAACCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGCGGCACCTTGGTCATCGACATCCGCCTCCCAGGTGGTTACCCCTNTGAGCCTCCTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTTAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAGTTCCTCCACCGGCATGGAAGAAGAGGTGCAGAAGGGGGGTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTAAGAAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGATCCCATTCGTTATAGGACAACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTAAAAAAAAAA]

[-] EMBL CA763135             [AGGCCGAGACAAGGGGTAACCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGCGGCACCTTGGTCATCGACATCCGCCTCCCAGGTGGTTACCCCTNTGAGCCTCCTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTTAGGATGCTGTCGTTGCACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGGCCTTTGCAAAGAGTTCCTCCACCGGCATGGAAGAAGAGGTGCAGAAGGGGGGTGAGATGGGCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTAAGAAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGATCCCATTCGTTATAGGACAACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTAAAAAAAAAA]




>consensus_12690#4
AGGCCGAGACAAGGGGTAACCACCTCACCGGCACCATCGCCGGGCCCCAAGGCACGCCCT
ACGAGGGCGGCACCTTGGTCATCGACATCCGCCTCCCAGGTGGTTACCCCTNTGAGCCTC
CTAAGATGCAGTTTATCACCAAAGTATGGCACCCTAACATTAGCAGCCAAAACGGAGCAA
TCTGCTTGGACATACTGAAGGACCAATGGAGCCCAGCCCTTACATTGAAGACGGCACTGC
TTTCCCTCCAAGCTCTGCTTTCTGCCCCTGCACCTGATGATCCTTAGGATGCTGTCGTTG
CACAACAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGACGGAGG
CCTTTGCAAAGAGTTCCTCCACCGGCATGGAAGAAGAGGTGCAGAAGGGGGGTGAGATGG
GCTTCCCTGAAGACATGGTGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGG
CTCTTAAGAAGCTCTGCTCTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGAT
CCCATTCGTTATAGGACAACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGC
TTTAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12690#1      -----------------------------------------------------GGAGTAG 7
consensus_12690#4      ------------------------------------------------------------
consensus_12690#0      ACTGAAGGAGTAGAAAACTATTTCCTTCCCCCTTTTCCCGTCGCGTTCGATTCGATTCGC 60
consensus_12690#3      ------------------------------------------------------------
consensus_12690#2      ------------------------------------------------------------
                                                                                   

consensus_12690#1      AAAGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCGAATCGCGGCGAGCGGCG 67
consensus_12690#4      ------------------------------------------------------------
consensus_12690#0      ATCGGCGTTGCTTCCAACGAGAGGGAGGGAGGGAGGAGAGGCGAATCGCGGCGAGCGGCG 120
consensus_12690#3      ------------------------------------------------------------
consensus_12690#2      ------------------------------------------------------------
                                                                                   

consensus_12690#1      GCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCAGAAGGAGCTGACGGAGTGCAACCGG 127
consensus_12690#4      ------------------------------------------------------------
consensus_12690#0      GCGGCGGCGGCGATGGTGGACGTGTCGAGGGTGCAGAAGGAGCTGACGGAGTGCAACCGG 180
consensus_12690#3      ------------------------------------------------------------
consensus_12690#2      ------------------------------------------------------------
                                                                                   

consensus_12690#1      GACAGGGAGGTCTCCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTCCCACCTC 187
consensus_12690#4      ----------------------------------AGGCCGAGACAAGGGGTAACCACCTC 26
consensus_12690#0      GACAGGGAGGTCTCCGGGGTGTCCATCGCGCTCCACGACGGCTCCACCATCTCCCACCTC 240
consensus_12690#3      ------------------------------------------------------------
consensus_12690#2      ------------------------------------------------------------
                                                                                   

consensus_12690#1      ACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGCGGCACCTTCGTCATCGAC 247
consensus_12690#4      ACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGCGGCACCTTGGTCATCGAC 86
consensus_12690#0      ACCGGCACCATCGCCGGGCCCCAAGGCACGCCCTACGAGGGCGGCACCTTCGTCATCGAC 300
consensus_12690#3      ------------------------------------------------------------
consensus_12690#2      ----------------------------TTTTTTTTTTTTGGGACAAATT---CACTAGA 29
                                                                                   

consensus_12690#1      ATCCGCCTCCCAGGTGGTTACCCCTTTGAGCCTCCTAAGATGCAGTTTATCACCAAAGTA 307
consensus_12690#4      ATCCGCCTCCCAGGTGGTTACCCCTNTGAGCCTCCTAAGATGCAGTTTATCACCAAAGTA 146
consensus_12690#0      ATCCGCCTCCCAGGTGGTTACCCCTTTGAGCCTCCTAAGATGCAGTTTATCACCAAAGTA 360
consensus_12690#3      ------------------------------------------CAGAGGACGAGACAAGGG 18
consensus_12690#2      ATTTTCATTTATGATTGGAGCAACACCAGAAATTCCCAAGTTCAGGACATGCTCGGAACT 89
                                                                 ***   *       *   

consensus_12690#1      TGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAA 367
consensus_12690#4      TGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAA 206
consensus_12690#0      TGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAA 420
consensus_12690#3      GGGCACCCTAACATTAGCAGCCAAAACGGAGCAATCTGCTTGGACATACTGAAGGACCAA 78
consensus_12690#2      TA-----CAGGTTTAAGGAATCAGTGTCAAGCTTGTCTTCTGATCATTATGTCTGTTTTC 144
                              *     * ** *  **      ***        **  ***  **   *     

consensus_12690#1      TGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCC 427
consensus_12690#4      TGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCC 266
consensus_12690#0      TGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCC 480
consensus_12690#3      TGGAGCCCAGCCCTTACATTGAAGACGGCACTGCTTTCCCTCCAAGCTCTGCTTTCTGCC 138
consensus_12690#2      ATCCATTTTTGCAGTACTTGCGTGACTATTCCACATTTTCTGCTACTGCTCGCTACTGGA 204
                                  *  *** *    ***    *  * **  ** * *   **   * ***  

consensus_12690#1      CCTGCACCT--GATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCG--TGACTA 483
consensus_12690#4      CCTGCACCT--GATGATCCTTAGGATGCTGTCGTTGCACAACAGTACTTGCG--TGACTA 322
consensus_12690#0      CCTGCACCT--GATGATCCTCAGGATGCTGTCGTTGCACAACAGTACTTGCG--TGACTA 536
consensus_12690#3      CCTGCACCT--GATGATCCTCAGGATGCTGTCGTTGCACAACAGTACCTGCG--TGACTA 194
consensus_12690#2      CGGAGGCCTTTGCAAAGAGTTCCTCCACCGGCATGGAAGAAAAGGTATTGTTATTGACGA 264
                       *     ***  *   *   *       * * * * * * ** **    **    **** *

consensus_12690#1      TT--CCACATTTTCTGCTACTGCTCGC-TACTGGA-CGGAGGCCTTTGCAAAGAATTCCT 539
consensus_12690#4      TT--CCACATTTTCTGCTACTGCTCGC-TACTGGA-CGGAGGCCTTTGCAAAGAGTTCCT 378
consensus_12690#0      TT--CCACATTTTCTGCTACTGCTCGC-TACTGGA-CGGAGGCCTTTGCAAAGAATTCCT 592
consensus_12690#3      TT--CCACATTTTTTGCTACTGCTCGC-TACTGGA-CGGAGGCCTTTGCAAAGAGTTCCC 250
consensus_12690#2      GTACTCATATTTATTGTTCCAGTGGGTATACAGAAGTTGTAGATACCGTAGTAAAATACT 324
                        *   ** ****  ** * * *   *  *** * *   *  *     * *   *  * * 

consensus_12690#1      CCACCGGCATGGAAGAAAAGGTGCAGAAGNTGGTTGAGATGGGCTTCCCTGAAGACATGG 599
consensus_12690#4      CCACCGGCATGGAAGAAGAGGTGCAGAAGGGGGGTGAGATGGGCTTCCCTGAAGACATGG 438
consensus_12690#0      CCACCGGCATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGG 652
consensus_12690#3      CCACCGGCATGGAAGAAAAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGG 310
consensus_12690#2      CCATT---CTGCAATCACAGGTGCAGAAGCTGGTTGAGATGGGCTTCCCTGAAGACATGG 381
                       ***      ** **  * ***********  ** **************************

consensus_12690#1      TGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCT 659
consensus_12690#4      TGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTAAGAAGCTCTGCT 498
consensus_12690#0      TGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCT 712
consensus_12690#3      TGAGAAGTGTTTTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCT 370
consensus_12690#2      TGAGAAGTGTTCTGAAGAGTGTCAATGGCGACGAGAACATGGCTCTTGAGAAGCTCTGCT 441
                       *********** *********************************** ************

consensus_12690#1      CTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGAATCCCCATTCGTTATAAGAC 719
consensus_12690#4      CTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGATCCC-ATTCGTTATAGGAC 557
consensus_12690#0      CTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGAATCCCCATTCGTTATAAGAC 772
consensus_12690#3      CTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGATCCCCCTTCGTTATAAGAC 430
consensus_12690#2      CTGGCTGAGGCCCTATAAGCCGATATGAACTGTAAATTGGATCCCCATTCGTTATAAGAC 501
                       *************************************** *****  ********* ***

consensus_12690#1      AACAGTGCTTGCTAA-------------------AAAAAAAAAAAAAAAAAAAAAA---- 756
consensus_12690#4      AACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTAAAAAAAAAA---- 613
consensus_12690#0      AACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTATGACACTCTTCTA 832
consensus_12690#3      AACAGTGCTTGCTAATGCTCCTGTTTTGCCATTTAAGTGTGGCTTTATGACCCTTTTCTA 490
consensus_12690#2      AACAGTGCTTGCTAATGCTCCTGTTCTGCCATTTAAGTGTGGCTTTATGACACTCTTCTA 561
                       ***************                   **          *  *          

consensus_12690#1      ------------------------------------------------------------
consensus_12690#4      ------------------------------------------------------------
consensus_12690#0      TATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAG 892
consensus_12690#3      TATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAG 550
consensus_12690#2      CATAGGGGATTGGACCATGGGACGTTGGGACTGAACTGAACCTATCCTAACTTGACAGAG 621
                                                                                   

consensus_12690#1      ------------------------------------------------------------
consensus_12690#4      ------------------------------------------------------------
consensus_12690#0      TTCGGTNATTTTTTTAAAAAAAAAAAAAAAAAAAAA------------------------ 928
consensus_12690#3      TTCGGTCATTTTTTTTATGGTTTCTTCCTATCATCCGTGGGCCTGAAGTAACGGGATTGT 610
consensus_12690#2      TTCGGNCATTTTTTTTATGGTTTCTTCCTATCATCCGNGGGCCTGAAGTAACGGGATTGT 681
                                                                                   

consensus_12690#1      -----------------------------
consensus_12690#4      -----------------------------
consensus_12690#0      -----------------------------
consensus_12690#3      GTCAGGTTTGCCCCATGAAAAAAAAAAAA 639
consensus_12690#2      GTCAGGGTTGCCC---------------- 694