cluster # 1270

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Oryza sativa
cluster # 1270 cluster # 1270 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1270#0 length = 695 sequences # 2

consensusID : consensus_1270#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 695
fasta sequence

                              [GCAAATATTTCTCAGCCACAAATCCAAACACTCGGTCCTTCCTATCAGAAGATCAGAATGAACAGGTTTTCAAATTCATCTCCCAACTCGACGATAATTTACACGTACATTTAACACATTCTTCCACCCTTCTCAAACTCCTCCCTTCTTCTTCCCGGGTAAGATTAAAATTAACTTGAGGCCAGCCAGCGTCGCCGGCGGCGAGATGTTTACAGGCTGGGCGTCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGGTTGTTGCCGAAGGGGTCGCTGAGGTGCTTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAGGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGGATCAGCGGGCGGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCGAATTAGTTCATACTTGCACATGCATGGCTTAATCTTTGAGACAAGCATATGA]

[+] EMBL CB684189             [GCAAATATTTCTCAGCCACAAATCCAAACACTCGGTCCTTCCTATCAGAAGATCAGAATGAACAGGTTTTCAAATTCATCTCCCAACTCGACGATAATTTACACGTACATTTAACACATTCTTCCACCCTTCTCAAACTCCTCCCTTCTTCTTCCCGGGTAAGATTAAAATTAACTTGAGGCCAGCCAGCGTCGCCGGCGGCGAGATGTTTACAGGCTGGGCGTCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGGTTGTTGCCGAAGGGGTCGCTGAGGTGCTTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAGGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGGATCAGCGGGCGGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCGAATTAGTTCATACTTGCACATGCATGGCTTAATCTTTGAGACAAGCATATGA]
[-] EMBL CB684188             [       TTTCTCAGCCACAAATCCAAACACTTGGTCCTTCCTATCAGAAGATCAGAATGAACAGGTTTTCAAATTCATCTCCCAACTCGACGATAATTTACACGTACATTTAACACATTCTTCCACCCTTCTCAAACTCCTCCCTTCTTCTTCCCGGGTAAGATTAAAATTAACTTGAGGCCAGCCAGCGTCGCCGGCGGCGAGATGTTTACAGGCTGGGCGTCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGGTTGTTGCCGAAGGGGTCGCTGAGGTGCTTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAGGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGGATCAGCGGGCGGAGCCCGCGTCAGCCTTTTATTTAATAAATGCGCCCCTCCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTAATACGGTTATCCGAGTAGCACGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCGAATTAGTTCATACTTGCACATGCATGGCTTAATCTTAGAGACAA        ]




>consensus_1270#0
GCAAATATTTCTCAGCCACAAATCCAAACACTCGGTCCTTCCTATCAGAAGATCAGAATG
AACAGGTTTTCAAATTCATCTCCCAACTCGACGATAATTTACACGTACATTTAACACATT
CTTCCACCCTTCTCAAACTCCTCCCTTCTTCTTCCCGGGTAAGATTAAAATTAACTTGAG
GCCAGCCAGCGTCGCCGGCGGCGAGATGTTTACAGGCTGGGCGTCCTCTCGGCGGCGCCG
GAGATGACGGTGAGCAGGTTGTTGCCGAAGGGGTCGCTGAGGTGCTTGCTGCCTTCCTTG
GATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCC
GTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAAT
GATGCGTCGCCGGCACGAGGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGGATCAG
CGGGCGGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCGGAAGTCGGGGTT
TGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCATCAAACA
AACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCGAATTAGTTCATACTTGC
ACATGCATGGCTTAATCTTTGAGACAAGCATATGA

clustalw multiple alignements is not computed in this case