These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12722#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1649 fasta sequence [TCTGCTGCTCATATGGTGAGCGATGGGGCACGACTATTACTGCCTCATATTGACTTTGAAGGTGGCGTTGTTGTTGCTGTCTATGATGATGAGCCAACCAGTATTGTGTCGTATGTCATGACATCACAAGAATACATTGAACACATCACACATAAAATGGATACGAAGAGCAGCTTTCATCATCCAGTAAATTGTGCTGTGGCCAGTAATAACCAATTTGAGGAATCTTTTCTCCCACAAGAAGGCCATTCAGAATTTAAAGGAACCCACTTCAGTTTTTCTTTTGATGATGAAGCATTTTCTGCTGATAATACAAAGTTTTCTGTGACATGTTATTTTGCAAGGCAGTTTGCTGCTCTTAGAAAGAAATGCTGCCCAGGTGATATTGATTACATACGCTCACTAAGTCGTTGTAAGAGATGGAGTGCACAAGGTGGAAAAAGCAATGTATACTTTGCAAAGACAATGGATGAGAGATTCATAATTAAACAGGTCACCAAGACAGAGCTGGACTCTTTTATAGGATTTGCTCCTCACTATTTCAGGCACTTGGCAGAATCACTAACTTCTAGGAGCCCGACTTGTTTGGCTAAAATAATGGGACTTTATCAGGTTAATATTAAGGGCTTGAAAGGAGGGCGTGAGGTAAAGATGGATCTTATGGTGATGGAGAACATTTTCTTCCAACGAACAATATCTAGGGTCTATGACCTAAAGGGTTCCGTGCGGTCACGCTATAATTCTGATACATCCGGCCACAATAAAGTACTTTTAGATTCTAATCTCATAGAGGCACAGCATACAAATCCTATATTTTTGGGGAGCAAGGCAAAACAAAGAATGGAAAGAGCTGTCTGGAACGATACATCATTCCTTGCGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATAAAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGCTCAGTTACTTGTGGTAAAAGATGTATCAGTTCAGTTAAAAAAAAAA] [+] EMBL CF307346 [TCTGCTGCTCATATGGTGAGCGATGGGGCACGACTATTACTGCCTCATATTGACTTTGAAGGTGGCGTTGTTGTTGCTGTCTATGATGATGAGCCAACCAGTATTGTGTCGTATGTCATGACATCACAAGAATACATTGAACACATCACACATAAAATGGATACGAAGAGCAGCTTTCATCATCCAGTAAATTGTGCTGTGGCCAGTAATAACCAATTTGAGGAATCTTTTCTCCCACAAGAAGGCCATTCAGAATTTAAAGGAACCCACTTCAGTTTTTCTTTTGATGATGAAGCATTTTCTGCTGATAATACAAAGTTTTCTGTGACATGTTATTTTGCAAGGCAGTTTGCTGCTCTTAGAAAGAAATGCTGCCCAGGTGATATTGATTACATACGCTCACTAAGTCGTTGTAAGAGATGGAGTGCACAAGGTGGAAAAAGCAATGTATACTTTGCAAAGACAATGGATGAGAGATTCATAATTAAACAGGTCACCAAGACAGAGCTGGACTCTNTTATAGGATTTGCTCCTCACTATTTCAGGCACTTGGCAGA ] [+] EMBL AK063300 [ GTGGCCAGTAATAACCAATTTGAGGAATCTTTTCTCCCACAAGAAGGCCATTCAGAATTTAAAGGAACCCACTTCAGTTTTTCTTTTGATGATGAAGCATTTTCTGCTGATAATACAAAGTTTTCTGTGACATGTTATTTTGCAAGGCAGTTTGCTGCTCTTAGAAAGAAATGCTGCCCAGGTGATATTGATTACATACGCTCACTAAGTCGTTGTAAGAGATGGAGTGCACAAGGTGGAAAAAGCAATGTATACTTTGCAAAGACAATGGATGAGAGATTCATAATTAAACAGGTCACCAAGACAGAGCTGGACTCTTTTATAGGATTTGCTCCTCACTATTTCAGGCACTTGGCAGAATCACTAACTTCTAGGAGCCCGACTTGTTTGGCTAAAATAATGGGACTTTATCAGGTTAATATTAAGGGCTTGAAAGGAGGGCGTGAGGTAAAGATGGATCTTATGGTGATGGAGAACATTTTCTTCCAACGAACAATATCTAGGGTCTATGACCTAAAGGGTTCCGTGCGGTCACGCTATAATTCTGATACATCCGGCCACAATAAAGTACTTTTAGATTCTAATCTCATAGAGGCACAGCATACAAATCCTATATTTTTGGGGAGCAAGGCAAAACAAAGAATGGAAAGAGCTGTCTGGAACGATACATCATTCCTTGCGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATAAAGGTGTAACATCTCGATTACTTGTGTAATTTGTAACAGCTCAGTTACTTGTG ] [+] EMBL CB679812 [ aaactttATGTATACTTTGCAAAGACAATGGATGAGAGATTCATAATTAAACAGGTCACCAAGACAGAGCTGGACTCTTTTATAGGATTTGCTCCTCACTATTTCAGGCACTTGGCAGAATCACTAACTTCTAGGAGCCCGACTTGTTTGGCTAAAATAATGGGACTTTATCAGGTTAATATTAAGGGCTTGAAAGGAGGGCGTGAGGTAAAGATGGATCTTATGGTGATGGAGAACATTTTCTTCCAACGAACAATATCTAGGGTCTATGACCTAAAGGGTTCCGTGCGGTCACGCTATAATTCTGATACATCCGGCCACAATAAAGTACTTTTAGATTCTAATCTCATAGAGGCACAGCATACAAATCCTATATTTTTGGGGAGCAAGGCAAAACAAAGAATGGAAAGAGCTGTCTGGAACGATACATCATTCCTTGCGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCACTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTT ] [-] EMBL CB679813 [ AGATTCTAATCTCATAGAGGCACAGCATACAAATCCTATATTTTTGGGGAGCAAGGCAAAACAAAGAATGGAAAGAGCTGTCTGGAACGATACATCATTCCTTGCGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTTTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCCCCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTTGACGCCGTGCTGTGCCTCATTTTTTTTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATGAAGGTGTAACATCTCGATTACTTGTGAAAaaa ] [+] EMBL BM421281 [ TGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTTGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATAAAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGCTCAGTTACTTGCTGTAAAAGATGTATCAGTTCAGTTAAAAAAAAAA] consensusID : consensus_12722#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1518 fasta sequence [CTTGAGAGAACAGGCAGGGGTTTGTCCCCGACATTCAAAACTGAGCTATCAGTTCCTGATATAATGCATGGTGAAGGTCGTTTGCTTCTTCAAAATGCTGGAGATGTTGTTGTTCCAATTTACGATGATGAGCCATCCAGCATGATAGCCCATGCCATGACTGTTCCTGATTATCATAAATTCATGTTGCCGTTGCTGGACCAGCAAAATGACTTGGGCAGATTTAGTGTTGGAAATTCTTTGGATCAGGATTCCTCTTCTAGGAGTTCATTAGATGTATCCACGTGGAGCTATGGTTCTGACCAACCTCGAACTGGAAATAATGACTCCAAGGATATTCATTTGACAGTTTCTTTTGAGGATGACGATTCAATTTCTGTGGATAAAGCTAAATTTTCTGTAACATGTTATTTTGCAAAGCAATTTGATGCAATCAGAAGAAAGTGCTGTCCAGACGAGCTTTACTACATTCGTTCTTTGAGTCGATGCAAGAGATGGAGTGCTCAAGGTGGCAAGAGTAATGTATACTTCGCCAAAACACTAGATGACAGATTTGTCATAAAGCAAGTGACCCGAACGGAACTAGATTCATTTGAGGACTATGCAGCTGAGTACTTCAAATATTTAACAGAATCTGTATCTTCAGGAAGCCCCACGTGCCTTGCTANAGTTCTTGGTCTTTACCAGGTTGCTGCCAGGAACTTGAGAGATGGCAAGGAACTAAAGTTGGATGTAATGGTCATGGAAAATCTTTTTTACAAGAAGAAGATATNCAGAATATATGACCTGAAAGGCTCTTTGCGTTCCCGTTACAATCCTGATACATCAGGAAACAACAAAGTTCTCTTAGATCTGAATCTATTAGAGACACTTCATACAAAGCCCATTTTTCTCGGAAGCAAAGCAAAACGAAGGTTGGAGCGAGCTGTCTGGAATGATACTTCTTTTCTGGCGTCGGTGGATGTGATGGATTACTCACTATTAGTTGGCATTGATGAAGAAAGCAAAGAGCTTGTGATGGGAATCATCGACTACCTTCGTCAGTACACCTGGGACAAGCAGCTGGAGACCTGGGTGAAGGCGTCAGGGTTCCTGGGTGGCTCCAGAGACGTGCTCCCAACTATCATTTCCCCAGACCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTGACTGTCCCTGACCAATGGTCATCTTGATGTCTCGATGCCATTGATGATATCCAAGCATCAGACGCATCCAGACGGTTCAAGTGCAAAATGGAATGATGGGAGAAGAACATGCCGTTCGTTTTTTTTTTCTTAACTTTCTTTTTTCGTTTTTTTTTTGTTAGAATAGTCGATCCTATTGTGCCTTGTGTATGTTATTTTTGTCACAACGGGCAGGATCGAGAGCTCCCTGGAGAGGGCTGACGCCGATCAATCCAGGCAGCCTAGAGATCAATACGTGTAAATTTTTTACCACACTATAACAGGAATTGTATAAAGAATGGGAAATACGCGAGTTGT] [+] EMBL CB667252 [CTTGAGAGAACAGGCAGGGGTTTGTCCCCGACATTCAAAACTGAGCTATCAGTTCCTGATATAATGCATGGTGAAGGTCGTTTGCTTCTTCAAAATGCTGGAGATGTTGTTGTTCCAATTTACGATGATGAGCCATCCAGCATGATAGCCCATGCCATGACTGTTCCTGATTATCATAAATTCATGTTGCCGTTGCTGGACCAGCAAAATGACTTGGGCAGATTTAGTGTTGGAAATTCTTTGGATCAGGATTCCTCTTCTAGGAGTTCATTAGATGTATCCACGTGGAGCTATGGTTCTGACCAACCTCGAACTGGAAATAATGACTCCAAGGATATTCATTTGACAGTTTCTTTTGAGGATGACGATTCAATTTCTGTGGATAAAGCTAAATTTTCTGTAACATGTTATTTTGCAAAGCAATTTGATGCAATCAGAAGAAAGTGCTGTCCAGACGAGCTTTACTACATTCGTTCTTTGAGTCGATGCAAGAGATGGAGTGCTCAAGGTGGCAAGAGTAATGTATACTTCGCCAAAACACTAGATGACAGATTTGTCATAAAGCAAGTGACCCGAACGGAACTAGATTCATTTGAGGACTATGCAGCTGAGTACTTCAAATATTTAACAGAATCTGTATCTTCAGGAAGCCCCACGTGCCTTGCTANAGTTCTTGGTCTTTACCAGGTTGCTGCCAGGAACTTGAGAGATGGCAAGGAACTAAAGTTGGATGTAATGGTCATGGAAAATCTTTTTTACAAGAAGAAGATATNCAGAATATATGACCTGAAAGGCTCTTTGCGTTCCCGTTACAATCC ] [+] EMBL CB663507 [ ATCATAAATTCTTGTTGCGGTTGCTGGACCAACAAAATGACTTGGGCAGATTTGATGTTGGAAATTCTTTGGATCAGGATTCCTCTTCTAGGAGTTCGTTAGATGTGTCCACGTGGAGCTATGGTTCTGACCGACCTCGAACTGGAAATAATGACTCCAAGGATATTCTTTTGACAGTTTCTTTTGAGGATGACGATTCAATTTCTGGGGATAAAGCTAAATTTTCTGTAACATGTTGTTTTGCAAAGCAATTTGATGCAATCGGAAGAGAGTGCTGTCGAGACGAGCTTTACTACATTCGTTCTTTGAGTCCATGCAAGAGATGGAGTGCTCAAGGTGGCAAGAGTAATGTATACTTCGCCAAAACACTACATGACAGATTTGTCATAAAGCAAGTGACCCGAACGGAACTAGATTCATTTGAGGACTATGCAGCTGAGTACTTCAAATATTTAACAGAATCTGTATCTTCACGAAGCCCCACGTGCCTTGCTAAAGTTCTTGGTCTTTAC ] [-] EMBL CB663508 [ CAGGAACTTGAGAGATGCAAAGGAACTAAAGTTGGATGTAATGGTCATGGAAAATCTTTTTTACAAGAAGAAGATATCAAGAATATATGACCTGAAAGGCTCTTTGCGTTCCCGTTACAATCCTGATACATCAGGAAACAACAAAGTTCTCTTAGATCTGAATCTATTAGAGACACTTCATACAAAGCCCATTTTTCTCGGAAGCAAAGCAAAACGAAGGTTGGAGCGAGCTGTCTGGAATGATACTTCTTTTCTGGCGTCGGTGGATGTGATGGATTACTCACTATTAGTTGGCATTGATGAAGAAAGCAAAGAGCTTGTGATGGGAATCATCGACTACCTTCGTCAGTACACCTGGGACAAGCAGCTGGAGACCTGGGTGAAGGCGTCAGGGTTCCTGGGTGGCTCCAGAGACGTGCTCCCAACTATCATTTCCCCAGACCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTGACTGTCCCTGACCAATGGTCATCTTGATGTCTCGATGCCATTGATGATATCCAAGCATCAGACGCATCCAGACGGTTCAAGTGCAAAATGGAATGATGGGAGAAGAACATGCCGTTCGTTTTTTTTTTCTTAACTTTCTTTTTTCGTTTTTTTTTTGTTAGAATAGTCGATCCTATTGTGCCTTGTGTATGTTATTTTTGTCACAACGGGCAGGATCGAGAGCTCCCTGGAGAGGGCTGACGCCGATCAATCCAGGCAGCCTAGAGATCAATACGTGTAAATTTTTTACCACACTATAACAGGAATTGTATAAAGAATGGGAAATACGCGAGTTGT] consensusID : consensus_12722#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 829 fasta sequence [TTGTTCGCGAGAAACAGTCAGTATAACACGAATACACGATTCATTCCTGCAGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAA-TTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATACAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGCTCAGTTACTAGTGTTAAAGATGTATCAGTTCAGTTACTTTTCAAAATAAAAGA] [+] EMBL CB681445 [TTGTTCGCGAGAAACAGTCAGTATAACACGAATACACGATTCATTCCTGCAGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAA TTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATACAGGTGTAACATCTCGATTACTTGTGAAAT ] [-] EMBL CB681446 [ TATAACACGAATACACGATTCATTCCTGCAGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAA TTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATAAAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGCTCAGTTACTAGTGTTAAAGATGTATCAGTTCAGTTACTTTTCAAAATAAAAGA] [-] EMBL CA305677 [ CCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTTGAGCAAAATGGGGGTGAAATGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTTGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12722#0 ------------------------------------------------------------ consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 CTTGAGAGAACAGGCAGGGGTTTGTCCCCGACATTCAAAACTGAGCTATCAGTTCCTGAT 60 consensus_12722#0 ------------TCTGCTGCTCATATGGTGAGCGATGGGGCACGACTATTACTGCCTCAT 48 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 ATAATGCATGGTGAAGGTCGTTTGCTTCTTCAAAATGCTGGAGATGTTGTTGTTCCAATT 120 consensus_12722#0 ATTGACTTTGAAGGTGGCGTTGTTGTTGCTGTCTATGATGATGAGCCAACCAGTATTGTG 108 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 TACGATGATGAGCCATCCAGCATGATAGCCCATGCCATGACTGTTCCTGATTATCATAAA 180 consensus_12722#0 TCGTATGTCATGACATCACAAGAATACATTGAACACATCACACATAAAATGGATACGAAG 168 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 TTCATGTTGCCGTTGCTGGACCAGCAAAATGACTTGGGCAGATTTAGTGTTGGAAATTCT 240 consensus_12722#0 AGCAGCTTTCATCATCCAGTAAATTGTGCTGTGGCCAGTAATAACCAATTTGAGGAATCT 228 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 TTGGATCAGGATTCCTCTTCTAGGAGTTCATTAGATGTATCCACGTGGAGCTATGGTTCT 300 consensus_12722#0 TTTCTCCCACAAGAAGGCCATTCAGAATTTAAAGGAACCCACTTCAGTTTTTCTTTTGAT 288 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 GACCAACCTCGAACTGGAAATAATGACTCCAAGGATATTCATTTGACAGTTTCTTTTGAG 360 consensus_12722#0 GATGAAG---CATTTTCTGCTGATAATACAAAGTTTTCTGTGACATGTTATTTTGCAAGG 345 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 GATGACGATTCAATTTCTGTGGATAAAGCTAAATTTTCTGTAACATGTTATTTTGCAAAG 420 consensus_12722#0 CAGTTTGCTGCTCTTAGAAAGAAATGCTGCCCAGGTGATATTGATTACATACGCTCACTA 405 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 CAATTTGATGCAATCAGAAGAAAGTGCTGTCCAGACGAGCTTTACTACATTCGTTCTTTG 480 consensus_12722#0 AGTCGTTGTAAGAGATGGAGTGCACAAGGTGGAAAAAGCAATGTATACTTTGCAAAGACA 465 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 AGTCGATGCAAGAGATGGAGTGCTCAAGGTGGCAAGAGTAATGTATACTTCGCCAAAACA 540 consensus_12722#0 ATGGATGAGAGATTCATAATTAAACAGGTCACCAAGACAGAGCTGGACTCTTTTATAGGA 525 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 CTAGATGACAGATTTGTCATAAAGCAAGTGACCCGAACGGAACTAGATTCATTTGAGGAC 600 consensus_12722#0 TTTGCTCCTCACTATTTCAGGCACTTGGCAGAATCACTAACTTCTAGGAGCCCGACTTGT 585 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 TATGCAGCTGAGTACTTCAAATATTTAACAGAATCTGTATCTTCAGGAAGCCCCACGTGC 660 consensus_12722#0 TTGGCTAAAATAATGGGACTTTATCAGGTTAATATTAAGGGCTTGAAAGGAGGGCGTGAG 645 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 CTTGCTANAGTTCTTGGTCTTTACCAGGTTGCTGCCAGGAACTTGAGAGATGGCAAGGAA 720 consensus_12722#0 GTAAAGATGGATCTTATGGTGATGGAGAACATTTTCTTCCAACGAACAATATCTAGGGTC 705 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 CTAAAGTTGGATGTAATGGTCATGGAAAATCTTTTTTACAAGAAGAAGATATNCAGAATA 780 consensus_12722#0 TATGACCTAAAGGGTTCCGTGCGGTCACGCTATAATTCTGATACATCCGGCCACAATAAA 765 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 TATGACCTGAAAGGCTCTTTGCGTTCCCGTTACAATCCTGATACATCAGGAAACAACAAA 840 consensus_12722#0 GTACTTTTAGATTCTAATCTCATAGAGGCACAGCATACAAATCCTATATTTTTGGGGAGC 825 consensus_12722#2 ------------------------------------------------------------ consensus_12722#1 GTTCTCTTAGATCTGAATCTATTAGAGACACTTCATACAAAGCCCATTTTTCTCGGAAGC 900 consensus_12722#0 AAGGCAAAACAAAGAATGGAAAGAGCTGTCTGGAACGATACATCATTCCTTGCGTCATTG 885 consensus_12722#2 --TTGTTCGCGAGAAACAGTCAGTATAACACGAATACACGATTCATTCCTGCAGTCATTG 58 consensus_12722#1 AAAGCAAAACGAAGGTTGGAGCGAGCTGTCTGGAATGATACTTCTTTTCTGGCGTCGGTG 960 * * * * * * * ** ** ** *** ** consensus_12722#0 GACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATC 945 consensus_12722#2 GACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATC 118 consensus_12722#1 GATGTGATGGATTACTCACTATTAGTTGGCATTGATGAAGAAAGCAAAGAGCTTGTGATG 1020 ** ** ***** ***** ** * ** *** * ** ** * ** ***** ***** consensus_12722#0 GGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAG 1005 consensus_12722#2 GGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAG 178 consensus_12722#1 GGAATCATCGACTACCTTCGTCAGTACACCTGGGACAAGCAGCTGGAGACCTGGGTGAAG 1080 ** ********** *** ** ***************************** ********* consensus_12722#0 GCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAG 1065 consensus_12722#2 GCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAG 238 consensus_12722#1 GCGTCAGGGTTCCTGGGTGGCTCCAGAGACGTGCTCCCAACTATCATTTCCCCAGACCAG 1140 ** ** ** ******* ******* *** * *** ** **** ** ** * **** consensus_12722#0 TACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGG 1125 consensus_12722#2 TACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGG 298 consensus_12722#1 TACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTGACTGTCCCTGACCAATGG 1200 ***************************************** * ***** *** * *** consensus_12722#0 TCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAG 1185 consensus_12722#2 TCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAG 358 consensus_12722#1 TCATCTTGATG-------TCTCGATGCCA------TTGATGATATCCAAGCATCAGACGC 1247 ** ** * ** * * **** * * ** ** * * * * consensus_12722#0 AATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTGAGCAAAATGGGGGTGAAACGAG 1245 consensus_12722#2 AATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTGAGCAAAATGGGGGTGAAACGAG 418 consensus_12722#1 ATCCA--GACGGTTCA-----AGTGCAAAAT-------GGAATGATGGGAGAAGAACATG 1293 * * ** **** ** ** * * * ***** * *** * consensus_12722#0 ACAGGTAGCCATTTAGCCA-ACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTG 1304 consensus_12722#2 ACAGGTAGCCATTTAGCCA-ACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTG 477 consensus_12722#1 CCGTTCGTTTTTTTTTTCTTAACTTTCTTTTTTCGTTTT--TTTTTTGTTAGAATAGTCG 1351 * *** * * * ****** * * ** * ** ** ** ** * consensus_12722#0 TAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCC-ACCTTGTCGTG 1363 consensus_12722#2 TAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCC-ACCTTGTCGTG 536 consensus_12722#1 ATCCTATTGTGCCTTGTGTATGTTATTTTTGTCACAACGGGCAGGATCGAGAGCTCCCTG 1411 * * * * ** ** * * *** ** * * * * ** consensus_12722#0 TGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGG 1423 consensus_12722#2 TGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGG 596 consensus_12722#1 GAGAGGGCTGACGCCGATCAATCCAG--GCAG-----------CCTAGAGATCAATACGT 1458 ** *** ** * ** *** **** ** ** **** ** consensus_12722#0 AAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACG 1483 consensus_12722#2 AAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACG 656 consensus_12722#1 GTAAATTTTTTACCACACTATAACAGGAATTGTAT---AAAGAATGGGAAATACGCGA-G 1514 *** ** * * ** ** * *** * * *** * * * ** *** * consensus_12722#0 CCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACA 1543 consensus_12722#2 CCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACA 716 consensus_12722#1 TTGT-------------------------------------------------------- 1518 ** consensus_12722#0 AGATAGAGGGCAGGTCAATAAAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGC 1603 consensus_12722#2 AGATAGAGGGCAGGTCAATACAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGC 776 consensus_12722#1 ------------------------------------------------------------ consensus_12722#0 TCAGTTACTTGTGGTAAAAGATGTATCAGTTCAGTTA------AAAAAAAAA-- 1649 consensus_12722#2 TCAGTTACTAGTGTTAAA-GATGTATCAGTTCAGTTACTTTTCAAAATAAAAGA 829 consensus_12722#1 ------------------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||