cluster # 12723

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Oryza sativa
cluster # 12723 cluster # 12723 Sequences # 11 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12723#0 length = 2006 sequences # 7
consensus_12723#1 length = 785 sequences # 1

consensus_12723#2 length = 390 sequences # 1
consensus_12723#3 length = 323 sequences # 1
consensus_12723#4 length = 318 sequences # 1

consensusID : consensus_12723#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2006
fasta sequence

                              [CACCACCTCCACCACCCCTCGCCGCCGACGCGTCGCCGTCGCCTCTCCTCCGATCGATCCCCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGGAGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCTCCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTTCGCCGTCGCGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCATCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCTCCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCCTGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCATGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGTGCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCTCAGGAGCTGAGGAAGGGATGTATGCATGGATTGCAGCAAATTATGCGCTGGGTACCCTAGGCGATGACTCACAAGATACTACGGGGATAATTGAGCTTGGTGGAGCTTCCGTTCAGGTAACTTTTGTTACGGACAAACCTTTGCCTCCAGAGTTCTCTCATACTCTGAAGTTCGGTGATGCCACATATAATCTGTACAGTCACAGCTTTCTACAACTTGGTCAGAATGTTGCGTACGAATCACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTCAAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTAAACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTGGTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGAGGAATGTA-GGTACCATGAATGCCGTAT-GGGAGCAGCATTTGTACCAGACCTTGATGGGAAATTTTTAGCAACAGAGAATTTCTACCATACTTCCAAGTTCTTTAGGTTGCGTTCTAAGTCTTTTCTTTCTGACCTGATGCTGGCTGGGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAAAGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTCGTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCTCGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTGCCTTGCTGAATGAATCTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTCTCCGTAAAATGTACCCAATGATTTCTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACACACCCACCAAAAAAAAAAAAGGAAAAAAA]

[+] EMBL CB684806             [CACCACCTCCACCACCCCTCGCCGCCGACGCGTCGCCGTCGCCTCTCCTCCGATCGATCCCCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGGAGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCTCCCGCCGCGCCCGCGGCCGGCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTGCGCCGTCGCGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCATCATCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCTCCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCCATGAAGGCGGCCCCGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCCTGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCATGGCCACCGCGGGGCTCCGGCTGCTCGACGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK065062             [                            CGCGTCGCCGTCGCCTCTCCTCCGATCGATCCCCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGGAGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCTCCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTTCGCCGTCGCGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCATCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCTCCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGACTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCCTGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCATGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGTGCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCTCAGGAGCTGAGGAAGGGATGTATGCATGGATTGCAGCAAATTATGCGCTGGGTACCCTAGGCGATGACTCACAAGATACTACGGGGATAATTGAGCTTGGTGGAGCTTCCGTTCAGGTAACTTTTGTTACGGACAAACCTTTGCCTCCAGAGTTCTCTCATACTCTGAAGTTCGGTGATGCCACATATAATCTGTACAGTCACAGCTTTCTACAACTTGGTCAGAATGTTGCGTACGAATCACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTCAAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTAAACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTGGTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGAGGAATGTA GGTACCATGAATGCCGTAT GGGAGCAGCATTTGTACCAGACCTTGATGGGAAATTTTTAGCAACAGAGAATTTCTACCATACTTCCAAGTTCTTTAGGTTGCGTTCTAAGTCTTTTCTTTCTGACCTGATGCTGGCTGGGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAAAGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTCGTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCTCGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTGCCTTGCTGAATGAATCTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTCTCCGTAAAATGTACCCAATGATTTCTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTA                               ]
[+] EMBL CB685203             [                                                     TCGACCTCCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGGAGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCTCCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTTCGCCGTCGCGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCATCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCTCCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCCTGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCATGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGTGCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCTCAGGAGCTGAGGAAGGGATGTATGCATGGATTGCAACAAATTATGCGCTGGGTACCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSS1632A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGTTGCGTACGAATCACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTCAAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTAAACTTCCTGCCAGTGTTCTTGAGTCG AGGTTGAGTACAGACCTTATGCTCATGCTGTTGGTAACTTCTCCGNATGTAGATCTTCAGCACTAACACTATTTCAGGAAGGAGGA AGGGATTTAGGGTACCATG ATTCCG ATGGGGAGCAGCATTTNTACCA ACCTT ATGGGAATTTTTTgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSS1254A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGTTGCGTACGAATCACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTCAAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTAAACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTGGTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGAGGAATGTAGGGTACCATGAATGCCGTAT GGGAGCAGCATTTGTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB684807             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAAAGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTCGTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCTCGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTGCCTTGCTGAATGAATCTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTCTCCGTAAAATGTACCCAATGATTTCTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACACACCCACCAAAAAAAAAAAAGGA      ]
[-] EMBL CA762565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATATTGTTGCTNTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGATGATTGATGTTGCGAATCAAATNGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGNGTCGTCGCTGGGATTTGGTGGAGTTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCTCGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTGCCTTGCTGAATGAATCTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTCTCCGTAAAATGTACCCAATGATTTCTCGAGCTGACTTGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACCCAACCCCCAAAAAAAAAAAAAAAAAAAAA]




>consensus_12723#0
CACCACCTCCACCACCCCTCGCCGCCGACGCGTCGCCGTCGCCTCTCCTCCGATCGATCC
CCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGG
AGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCT
CCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTTCGCCGTCG
CGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCA
TCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCT
CCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCC
CGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCC
TGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCA
TGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGT
GCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCT
CAGGAGCTGAGGAAGGGATGTATGCATGGATTGCAGCAAATTATGCGCTGGGTACCCTAG
GCGATGACTCACAAGATACTACGGGGATAATTGAGCTTGGTGGAGCTTCCGTTCAGGTAA
CTTTTGTTACGGACAAACCTTTGCCTCCAGAGTTCTCTCATACTCTGAAGTTCGGTGATG
CCACATATAATCTGTACAGTCACAGCTTTCTACAACTTGGTCAGAATGTTGCGTACGAAT
CACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTC
AAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTA
AACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTG
GTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGAGGAAT
GTAGGTACCATGAATGCCGTATGGGAGCAGCATTTGTACCAGACCTTGATGGGAAATTTT
TAGCAACAGAGAATTTCTACCATACTTCCAAGTTCTTTAGGTTGCGTTCTAAGTCTTTTC
TTTCTGACCTGATGCTGGCTGGGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAA
AGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATA
TTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTG
CGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGG
CGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTA
TACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTC
GTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCT
CGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTGCCTTGCT
GAATGAATCTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTT
TGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGA
TGACCTGATGTATAGCAGCAATTTTGTCTCCGTAAAATGTACCCAATGATTTCTCGAGCT
GACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACACAC
CCACCAAAAAAAAAAAAGGAAAAAAA

consensusID : consensus_12723#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 785
fasta sequence

                              [TCACTCACATTCAGATGATGCGGCTGCGACGAGGGCACATCACCCAGCTTCTGCTGCTGATACTTGCTCCCGTTCGCCTCCTGCAGGAGATCACCATTGAAGAGGCTGCGACAACCCTAGCTCCTCCTCCTCCTCAGACCATTTCCTCCATGATAGGCTCCCTCCGTGGCCGCGGCCGCCGCCTCCTCGCCGCCGCGTCCGCCCTCGCGCTCCTCCTCCTCCTCCTCCTGTCCCGCTCGCCGCGTCGTCGTCCCCACGGGTATGGCGTCGTCATCGACGCCGGTAGCACGAGGAGCCGCGTCCACGTCATCGCCTACCGCTCCCCCGCCGCCTCCGCGGCCGCGGCCGCGCTCCCGTGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGCTGTTGTCCTTCGCCTCCGATCCGGGCAGCGTGGGTCGGTCGCTGGCGCTGCTCGTGGAGTTCGCTCATGGTCGGCGGCGGCGAGGCCCGGCATGGTCGGGTGAGGCAAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGCTCATGGTCGGCGGCGGCGGCGAGGGCCGGCATGGTCGGGTGAGGCGAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGCGGGCGGCGTGGCTGGTGTGGCGGGCGGCGGAGATAATCCTCTTTGGCGTGCGTTCTTTTTTTCGTTCTTTTTGGCGTGCAGTTTCTTTTTCCGGAGCGAGACGCAGTGTTAATCCGGTGCTAATTGCAACCGCAGGATTAATCCGGCGCTAATTGCAGTCGCGGTGT]

[+] EMBL AK106729             [TCACTCACATTCAGATGATGCGGCTGCGACGAGGGCACATCACCCAGCTTCTGCTGCTGATACTTGCTCCCGTTCGCCTCCTGCAGGAGATCACCATTGAAGAGGCTGCGACAACCCTAGCTCCTCCTCCTCCTCAGACCATTTCCTCCATGATAGGCTCCCTCCGTGGCCGCGGCCGCCGCCTCCTCGCCGCCGCGTCCGCCCTCGCGCTCCTCCTCCTCCTCCTCCTGTCCCGCTCGCCGCGTCGTCGTCCCCACGGGTATGGCGTCGTCATCGACGCCGGTAGCACGAGGAGCCGCGTCCACGTCATCGCCTACCGCTCCCCCGCCGCCTCCGCGGCCGCGGCCGCGCTCCCGTGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGCTGTTGTCCTTCGCCTCCGATCCGGGCAGCGTGGGTCGGTCGCTGGCGCTGCTCGTGGAGTTCGCTCATGGTCGGCGGCGGCGAGGCCCGGCATGGTCGGGTGAGGCAAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGCTCATGGTCGGCGGCGGCGGCGAGGGCCGGCATGGTCGGGTGAGGCGAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGCGGGCGGCGTGGCTGGTGTGGCGGGCGGCGGAGATAATCCTCTTTGGCGTGCGTTCTTTTTTTCGTTCTTTTTGGCGTGCAGTTTCTTTTTCCGGAGCGAGACGCAGTGTTAATCCGGTGCTAATTGCAACCGCAGGATTAATCCGGCGCTAATTGCAGTCGCGGTGT]




>consensus_12723#1
TCACTCACATTCAGATGATGCGGCTGCGACGAGGGCACATCACCCAGCTTCTGCTGCTGA
TACTTGCTCCCGTTCGCCTCCTGCAGGAGATCACCATTGAAGAGGCTGCGACAACCCTAG
CTCCTCCTCCTCCTCAGACCATTTCCTCCATGATAGGCTCCCTCCGTGGCCGCGGCCGCC
GCCTCCTCGCCGCCGCGTCCGCCCTCGCGCTCCTCCTCCTCCTCCTCCTGTCCCGCTCGC
CGCGTCGTCGTCCCCACGGGTATGGCGTCGTCATCGACGCCGGTAGCACGAGGAGCCGCG
TCCACGTCATCGCCTACCGCTCCCCCGCCGCCTCCGCGGCCGCGGCCGCGCTCCCGTGGA
TCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGCTGTTGTCCTTCGCCTCCGA
TCCGGGCAGCGTGGGTCGGTCGCTGGCGCTGCTCGTGGAGTTCGCTCATGGTCGGCGGCG
GCGAGGCCCGGCATGGTCGGGTGAGGCAAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGC
TCATGGTCGGCGGCGGCGGCGAGGGCCGGCATGGTCGGGTGAGGCGAGGTGGGAAGTCAC
GCGGGCGGCGGGTGAGGCGGGCGGCGTGGCTGGTGTGGCGGGCGGCGGAGATAATCCTCT
TTGGCGTGCGTTCTTTTTTTCGTTCTTTTTGGCGTGCAGTTTCTTTTTCCGGAGCGAGAC
GCAGTGTTAATCCGGTGCTAATTGCAACCGCAGGATTAATCCGGCGCTAATTGCAGTCGC
GGTGT

consensusID : consensus_12723#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 390
fasta sequence

                              [CTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGAGTACTCAGATTCATCAGTTCCATATCTAAACAGCTATTACTATTCTGGGTTGGTTCCACTCCTATTCATTTCCGCTGTTGTTCTATTTACAGCATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTAGTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGT]

[-] EMBL CB685204             [CTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGAGTACTCAGATTCATCAGTTCCATATCTAAACAGCTATTACTATTCTGGGTTGGTTCCACTCCTATTCATTTCCGCTGTTGTTCTATTTACAGCATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTAGTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGT]




>consensus_12723#2
CTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAG
GATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCAT
TGTGCAGAAGGCGTCAAACCAGACAGAGTACTCAGATTCATCAGTTCCATATCTAAACAG
CTATTACTATTCTGGGTTGGTTCCACTCCTATTCATTTCCGCTGTTGTTCTATTTACAGC
ATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGG
CCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTAGTCGCTGGGATTTGGTG
GAGCTCCTGCGGTGGGGTGCCAGTGATCGT

consensusID : consensus_12723#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 323
fasta sequence

                              [CGGAGGGAGCCTATCATGGAGGAAATGGTCTGAGGAGGAGGAGGAGCTAGGGTTGTCGCAGCCTCTTCAATGGTGATCTCCNTGCCAGGAGGCGCACGGGCAGCCCAGTCATCCAGCAGCCAGCACAGCTGTGGTGCATGTGCCCTCGTCGCCAGCCGCCATCATCTGCAATCAGCCTGGGCTTCAGCTGGGGCANTNGGTGGTGGTTTCTTCGGCCCATGCAGGCAAGCACATTGTTAGGCTNGCAACTTCTTCAACATGTCCCCACNNTGGGCGTGCCCAACAAGACCATGTTGCACCAGCAACAACCACTGCAGGCCCTC]

[+] EMBL CB965719             [CGGAGGGAGCCTATCATGGAGGAAATGGTCTGAGGAGGAGGAGGAGCTAGGGTTGTCGCAGCCTCTTCAATGGTGATCTCCNTGCCAGGAGGCGCACGGGCAGCCCAGTCATCCAGCAGCCAGCACAGCTGTGGTGCATGTGCCCTCGTCGCCAGCCGCCATCATCTGCAATCAGCCTGGGCTTCAGCTGGGGCANTNGGTGGTGGTTTCTTCGGCCCATGCAGGCAAGCACATTGTTAGGCTNGCAACTTCTTCAACATGTCCCCACNNTGGGCGTGCCCAACAAGACCATGTTGCACCAGCAACAACCACTGCAGGCCCTC]




>consensus_12723#3
CGGAGGGAGCCTATCATGGAGGAAATGGTCTGAGGAGGAGGAGGAGCTAGGGTTGTCGCA
GCCTCTTCAATGGTGATCTCCNTGCCAGGAGGCGCACGGGCAGCCCAGTCATCCAGCAGC
CAGCACAGCTGTGGTGCATGTGCCCTCGTCGCCAGCCGCCATCATCTGCAATCAGCCTGG
GCTTCAGCTGGGGCANTNGGTGGTGGTTTCTTCGGCCCATGCAGGCAAGCACATTGTTAG
GCTNGCAACTTCTTCAACATGTCCCCACNNTGGGCGTGCCCAACAAGACCATGTTGCACC
AGCAACAACCACTGCAGGCCCTC

consensusID : consensus_12723#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 318
fasta sequence

                              [GCCATATATATGGTTNTGACGTTGCCTTGCTGAATGAATNTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTNTCCGTAAAATGTACCCAATGATTTNTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACNCAACCNCCAAAANAGAGAGTTTTGAAATTTTGTTCNAAAAAAAAAAAAAA]

[+] EMBL AU174213             [GCCATATATATGGTTNTGACGTTGCCTTGCTGAATGAATNTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTNTCCGTAAAATGTACCCAATGATTTNTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACNCAACCNCCAAAANAGAGAGTTTTGAAATTTTGTTCNAAAAAAAAAAAAAA]




>consensus_12723#4
GCCATATATATGGTTNTGACGTTGCCTTGCTGAATGAATNTTGACTGTAAAAGCAGCCCT
TTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCT
CAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTNT
CCGTAAAATGTACCCAATGATTTNTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCC
AGAGAACAAATTATCAATATCAGGTACNCAACCNCCAAAANAGAGAGTTTTGAAATTTTG
TTCNAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      CACCACCTCCACCACCCCTCGCCGCCGACGCGTCGCCGTCGCCTCTCCTCCGATCGATCC 60
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      CCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGG 120
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      AGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCT 180
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      CCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTTCGCCGTCG 240
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      CGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCA 300
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      TCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCT 360
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      CCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCC 420
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      CGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCC 480
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      TGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCA 540
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      TGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGT 600
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      GCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCT 660
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      CAGGAGCTGAGGAAGGGATGTATGCATGGATTGCAGCAAATTATGCGCTGGGTACCCTAG 720
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      GCGATGACTCACAAGATACTACGGGGATAATTGAGCTTGGTGGAGCTTCCGTTCAGGTAA 780
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      CTTTTGTTACGGACAAACCTTTGCCTCCAGAGTTCTCTCATACTCTGAAGTTCGGTGATG 840
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      CCACATATAATCTGTACAGTCACAGCTTTCTACAACTTGGTCAGAATGTTGCGTACGAAT 900
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      CACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTC 960
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      AAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTA 1020
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      AACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTG 1080
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      GTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGAGGAAT 1140
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      GTAGGTACCATGAATGCCGTATGGGAGCAGCATTTGTACCAGACCTTGATGGGAAATTTT 1200
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      TAGCAACAGAGAATTTCTACCATACTTCCAAGTTCTTTAGGTTGCGTTCTAAGTCTTTTC 1260
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      TTTCTGACCTGATGCTGGCTGGGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAA 1320
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      AGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATA 1380
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      ------------------------------------------------------------
consensus_12723#0      TTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTG 1440
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      -----------------TCACTCACATTCAGATGATGCGGCTGCGACGAGGGCACATCAC 43
consensus_12723#0      CGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGG 1500
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      CCAGCTTCTGCTGCTGATACTTGCTCCCGTTCGCCTCCTGCAGGAGATCACCATTGAAGA 103
consensus_12723#0      CGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTA 1560
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------CGGAGGGAGCCTATCATGGAGGAAATGGTCTGAGGA 36
                                                                                   

consensus_12723#1      GGCTGCGACAACCCTAGCTCCTCCTCCTCCTCAGACCATTTCCTCCATGATAGGCTCCCT 163
consensus_12723#0      TACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTC 1620
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      GGAGGAGG-AGCTAGGGTTGTCGCAGCCTCTTCAATGGTGATCTCCNTGCCAGGAGGCGC 95
                                                                                   

consensus_12723#1      CCGTG-GCCGCGGCCGCCGCCTCCTCGCCGCCGCGTCCGCCCTCGCGCTCCTCCTCCTCC 222
consensus_12723#0      GTCGC-TGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTC 1679
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ACGGGCAGCCCAGTCATCCAGCAGCCAGCACAGCTGTGGTGCATGTGCCCTCGTCGCCAG 155
                                                                                   

consensus_12723#1      TCCTCCTGTCCCGCTCGCCGCGTCGTCGTCCCCACGGGTATGGCGTCGTCATCGACGCCG 282
consensus_12723#0      TCGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTG---CCT 1736
consensus_12723#4      ------------------------------GCCATATATATGGTTNTGACGTTG---CCT 27
consensus_12723#2      -----------------------------CTCAGCATATATTGTTGCTTTGCTG---CAT 28
consensus_12723#3      CCGCCATCATCTGCAATCAGCCTGGGCTTCAGCTGGGGCANTNGGTGGTGGTTT----CT 211
                                                              *                    

consensus_12723#1      GTAGCACGAGGAGCCGCGTCCACGTCATCGCCTACCGCTCCCCCGCCGCCTCCGCGGCCG 342
consensus_12723#0      --TGCTGAATGAATCTTGACTGT--AAAAGCAGCCCTTTGTA--GTTAATACAACGATGT 1790
consensus_12723#4      --TGCTGAATGAATNTTGACTGT--AAAAGCAGCCCTTTGTA--GTTAATACAACGATGT 81
consensus_12723#2      GATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTT--GCGAATCAAATTGGCG 86
consensus_12723#3      TCGGCCCATGCAGGCAAGCACATTGTTAGGCTNGCAACTTCTTCAACATGTCC-CCACNN 270
                           *            *           *        *                     

consensus_12723#1      CGGCCGCGCTCCCGTGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGCT 402
consensus_12723#0      GGGTTGCTTTTGCTGCAAC--GGTCG-TGTTTCCAGAAT-GCTCAATGATGTACTGGTCT 1846
consensus_12723#4      GGGTTGCTTTTGCTGCAAC--GGTCG-TGTTTCCAGAAT-GCTCAATGATGTACTGGTCT 137
consensus_12723#2      GTGTGCCTGTTGACTGGGC--ATTGGGTGCTTTCATTGT-GCAGAAGGCGTCAAACCAGA 143
consensus_12723#3      TGGGCGTGCCCAACAAGAC---CATGTTGCAC-CAGCAACAACCACTGCAGGCCCTC--- 323
                         *                      *  *    *          *  *            

consensus_12723#1      GTTGTCCTTCGCCTCCGATCCGGGCAGCGTGGGTCGGTCGCTGGCGCTGCTCGTGGAGTT 462
consensus_12723#0      CAAAATATTGCTGATGACCTGATGTATA-----GCAGCAATT--TTGTCTCCGTAAAATG 1899
consensus_12723#4      CAAAATATTGCTGATGACCTGATGTATA-----GCAGCAATT--TTGTNTCCGTAAAATG 190
consensus_12723#2      CAGAGTACTCAGATTCATCAGTTCCATATCTAAACAGCTATTACTATTCTGGGTTGGTTC 203
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      CGCTC---ATGGTCGGCGGCGGCGAGGCCCGGCATGGTCGGGTGAG-GCAAGGTGGGAAG 518
consensus_12723#0      TACCC--AATGATTTCTCGAGCTGA--CTAGCTAAAATTTG-TAAATGTACATCCAGAGA 1954
consensus_12723#4      TACCC--AATGATTTNTCGAGCTGA--CTAGCTAAAATTTG-TAAATGTACATCCAGAGA 245
consensus_12723#2      CACTCCTATTCATTTCCGCTGTTGTT-CTATTTACAGCATGCTCCATCCTGAGGGGGAGA 262
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      TCACGCGGGCGGCGGGTGAGGCTCATGGTCGGCGGCGGCGGCGAGGGCCGGCATGGTCGG 578
consensus_12723#0      ACAAATTATCAATA--TCAGGTACACACCCACCAA-AAAAAAAAAAGGAAAAAAA----- 2006
consensus_12723#4      ACAAATTATCAATA--TCAGGTACNCAACCNCCAA-AANAGAGAGTTTTGAAATTTT-GT 301
consensus_12723#2      AGATCTCGCCTGAA--GACGGTATACGACATGGAG-AAAGGCCGGT----ACATCAT-AA 314
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      GTGAGGCGAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGCGGGCGGCGTGGCTGGTGTGG 638
consensus_12723#0      ------------------------------------------------------------
consensus_12723#4      TCNAAAAAAAAAAAAAA------------------------------------------- 318
consensus_12723#2      CCAGGGTGAGACGATGAGCCTTGCGCGTAGTCGCTGGGATT--TGGTGGAGCTCCTGCGG 372
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      CGGG-CGGCGGAGATAATCCTCTTTGGCGTGCGTTCTTTTTTTCGTTCTTTTTGGCGTGC 697
consensus_12723#0      ------------------------------------------------------------
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      TGGGGTGCCAGTGATCGT------------------------------------------ 390
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      AGTTTCTTTTTCCGGAGCGAGACGCAGTGTTAATCCGGTGCTAATTGCAACCGCAGGATT 757
consensus_12723#0      ------------------------------------------------------------
consensus_12723#4      ------------------------------------------------------------
consensus_12723#2      ------------------------------------------------------------
consensus_12723#3      ------------------------------------------------------------
                                                                                   

consensus_12723#1      AATCCGGCGCTAATTGCAGTCGCGGTGT 785
consensus_12723#0      ----------------------------
consensus_12723#4      ----------------------------
consensus_12723#2      ----------------------------
consensus_12723#3      ----------------------------