cluster # 12724

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Oryza sativa
cluster # 12724 cluster # 12724 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12724#0 length = 2255 sequences # 9

consensus_12724#1 length = 825 sequences # 2

consensusID : consensus_12724#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2255
fasta sequence

                              [TACGGCCCAGATCCCTCCAAAAGTGGAGCAGGTTCGGGCTAAGGCTACGCGTCGCCGCCGCGGCCGCCTCCACCTCATCATCTCCCACCTCTCGCCGTCGCCGCCGCTGCTATTTAGATCGAATCGAATCGAATCCCACGCGGCGCGGAGCCCTCCACTTGCGCTGCTGCTGCTGCGAGAGATCGATCGAGAAGGCGCGAACCATTCTCCCCCCTCTCGGATCGGCGGGTCGAATTGGGGCGGAGGAGATGCTGGACGCCTTCTTCAAGGGCGCCGGTGGCGGCGGCGGCGGGTTCCGCGGCGCAAAGTGCAAGACGCTGCTGAAGCTGTCGATCCCGCGGATCAAGCTGCTGCGGAACAGGCGGGAGCTGCAGCTGCGGCAGATGCGGCGGGACATCGCCAAGCTGCTCGAGGCCGGCCAGGAGGCCACCGCGCGAATCAGGGTGGAGCACATCATCCGGGAGGAGAACATGATGGCCGCGCAGGAGATTCTTGAGCTCTTCTGCGAGCTCATCGCCGTCCGCTTGCCCATCATCGAGACGCAAAAGGAGTGCCCTATAGATCTCAAAGAAGCTATATCCAGCATATGTTTCGCTGCTCCCAGATGTGCAGATCTGCCTGAACTTATGCAAGTTCAGATGATGTTTGCAACTAAATACGGGAAAGAGTTTGTTGCTGCAGCTACAGAGTTGATGCCAGATTGTGGGGTCAATCGGCAGATAATTGAACTACTTTCTATCCGTGCTCCTCCTGTTGATGTAAAGATGAAGCTGCTGAAAGAGATTGCTGAGGAGCATGAGATTGATTGGGATCCATCAGCCACAGAGACAGAATATCTTAAACCACATGAGGATCTATTGAATGGACCAACCTACTTCAATGGTTCTACACTTCCTCTTCCAAAGGAGAAACATGAGGAAACACTAGCTGCAAGTGCTGCCGAACATCCTGATGAAGACTATGAGTCTGATACTGGTTTAGAGTCATTGGATTTGCCTGAAGTCCCAAAAGCAGCCATTCGCCCACCTTCTGATACTCCAGCAACCCCTGATATTGACACACACGTGCAAAGCTCCCAGCCAACTTCTCATGAATTCTCAAACATGCCAAGCTCCCAACCAACTTCTCATGAATTCTTAAACATGCCAAGCTCCCAGCCATCTTCTCATGAATTCTCAAACATTAAAAGCTCCCAGACAACTTCTCATGAATT-CTCAAATGTTCAAACCTCCCAGTTGGCTTCGCATGAATTCTCAAACCCAAGTGACTTGGAAGAGAATCCAACAGCTAATGCTGCTTTCATGACTCAGCCAAAAGGTTCAGAACATATTCCTACACCATTCGCTCAACCAAGTATGCCAGTTTCACCCAATGAAAAGAAACATTTTGTTCCATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAAATGAGTCCATTCCGTCACCTTCTCCATCTCCTCCGGTGAAGCCAACAGATCCAGGAATGTTCAGGACGATTGATGAAGTGACCCCACCTCCAACAGCTACTGATTACTTGTTCTCAAAACAACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATGTACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTGCTGCTGCAAACCTTGCACAACTGCGCATCGCAGATCTGAAGAAGAATAGTAAGGCTTATGAGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCCTCAATCCGAAGTGACACAGAAACCAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTCGCCATTGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCTCGTCAAAACCTTGAGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCGAAG-TGCCTGCG-ATGTTGCATCTTCAGCCTTGTTTAATCTTGAATTTGGCTGTTGCCGGGATATTCTGTGTATGCTGAGTTGATACTTAAAGGGGGGTACTGGCGGGGTACTGGCGTACTGCAGTTTTACTAGGTCACTGCATGGCTTGTTCAATGTCTGTAAATTGTAAATGTGTGCTGCTTGTACCAAATTTGTGATACATTTTACCACCTCCACAAGAAATTTAAAAAAATAAAGGTGAACATTATGACTTGNTTAAAAAAAAANCCAAGCGTCNCGG]

[+] EMBL CA753560             [TACGGCCCAGATCCCTCCAAAAGTGGAGCAGGTTCGGGCTAAGGCTACGCGTCGCCGCCGCGGCCGCCTCCACCTCATCATCTCCCACCTCTCGCCGTCGCCGCCGCTGCTATTTAGATCGAATCGAATCGAATCCCACGCGGCGCGGAGCCCTCCACTTGCGCTGCTGCTGCTGCGAGAGATCGATCGAGAAGGCGCGAACCATTCTCCCCCCTCTCGGATCGGCGGGTCGAATTGGGGCGGAGGAGATGCTGGACGCCTTCTTCAAGGGCGCCGGTGGCGGCGGCGGCGGGTTCCGCGGCGCAAAGTGCAAGACGCTGCTGAAGCTGTCGATCCCGCGGATCAAGCTGCTGCGGAACAGGCGGGAGCTGCAGCTGCGGCAGATGCGGCGGGACATCGCCAAGCTGCTCGAGGCCGGCCAGGAGGCCACCGCGCGAATCAGGGTGGAGCACATCATCCGGGAGGAGAACATGATGGCCGCGCAGGAGATNCTTGAGCTCTTCTGCGAGCTCATCGCCGTCCGCTTGCCCATCATCGAGACGCAAAAGGAGTGCNCTATAGATCTCAAAGAAGCTATATCCAGCATATGTTTCGCTGCTCCCAGATGTGCAGATCTGCCTGAnnctattgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB622906             [                                                                                          CTCGCCGTCGCCGCCGCTGCTATTTAG     ATCGAATCGAATCCCACGCGGCGCGGAGCCCTCCACTTGC   GCTGCTGCTGCGAGAGATCGATCGAGAAGGCGCGAACCATTTTCCCCCCTCTCGGATCGGCGGGTCGAATTAGGGCGGAGGAGATGCTGGACGCCTTCTTCAAGGGCGCCGGTGGCGGCGGCGGCGGGTTCCGCGGCGCCAAGTGCAAGACGCTGCTGAAGCTGTCGATCCCGCGGATCAAGCTGCTGCGGAACAGGCGGGAGCTGCAGCTGCGGCAGATGCGGCGGGACATCGCCAAGCTGCTCGAGGCCGGCCAGGAGGCCACCGCGCGAATCAGGGTGGAGCACATCATCCGGGAGGAGAACATGATGGCCGCGCAGGAGATTCTTGAGCTCTTCTGCGAGCTCATCGCCGTCCGCTTGCCCATCATCGAGACGCAAAAGGAGTGCCCTATAGATCTCAAAGAAGCTATATCCAGCATATGTTTCGCTGCTCCCAGATGTGCAGATCTGCCTGAACTAATGCAAGTTCAGATGATGTTTGCAACTAAATACGGGAAAGAGTTTGTTGCTGCAGCTACAGAGTTGATGCCAGATTGTGGGGTCAATCGGCAGATAATTGAACTACTTTCTATCCGTGCTCCTCCTGTTGATGTAAAGATGAAGCTGCTGAAAGAGATTGCTGAGGAGCATGAGATTGATTGGGATCCATCAGCCACAGAGACAGAATATCTTANACCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK072367             [                                                                                                                                                    AGCCCTCCACTTGCGCTGCTGCTGCTGCGAGAGATCGATCGAGAAGGCGCGAACCATTCTCCCCCCTCTCGGATCGGCGGGTCGAATTGGGGCGGAGGAGATGCTGGACGCCTTCTTCAAGGGCGCCGGTGGCGGCGGCGGCGGGTTCCGCGGCGCAAAGTGCAAGACGCTGCTGAAGCTGTCGATCCCGCGGATCAAGCTGCTGCGGAACAGGCGGGAGCTGCAGCTGCGGCAGATGCGGCGGGACATCGCCAAGCTGCTCGAGGCCGGCCAGGAGGCCACCGCGCGAATCAGGGTGGAGCACATCATCCGGGAGGAGAACATGATGGCCGCGCAGGAGATTCTTGAGCTCTTCTGCGAGCTCATCGCCGTCCGCTTGCCCATCATCGAGACGCAAAAGGAGTGCCCTATAGATCTCAAAGAAGCTATATCCAGCATATGTTTCGCTGCTCCCAGATGTGCAGATCTGCCTGAACTTATGCAAGTTCAGATGATGTTTGCAACTAAATACGGGAAAGAGTTTGTTGCTGCAGCTACAGAGTTGATGCCAGATTGTGGGGTCAATCGGCAGATAATTGAACTACTTTCTATCCGTGCTCCTCCTGTTGATGTAAAGATGAAGCTGCTGAAAGAGATTGCTGAGGAGCATGAGATTGATTGGGATCCATCAGCCACAGAGACAGAATATCTTAAACCACATGAGGATCTATTGAATGGACCAACCTACTTCAATGGTTCTACACTTCCTCTTCC AAGGAGAAACATGAGGAAACACTAGCTGCAAGTGCTGCCGAACATCCTGATGAAGACTATGAGTCTGATACTGGTTTAGAGTCATTGGATTTGCCTGAAGTCCCAAAAGCAGCCATTCGCCCACCTTCTGATACTCCAGCAACCCCTGATATTGACACACACGTGCAAAGCTCCCAGCCAACTTCTCATGAATTCTCAAACATGCCAAGCTCCCAACCAACTTCTCATGAATTCTTAAACATGCCAAGCTCCCAGCCATCTTCTCATGAATTCTCAAACATTAAAAGCTCCCAGACAACTTCTCATGAATT CTCAAATGTTCAAACCTCCCAGTTGGCTTCGCATGAATTCTCAAACCCAAGTGACTTGGAAGAGAATCCAACAGCTAATGCTGCTTTCATGACTCAGCCAAAAGGTTCAGAACATATTCCTACACCATTCGCTCAACCAAGTATGCCAGTTTCACCCAATGAAAAGAAACATTTTGTTCCATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAAATGAGTCCATTCCGTCACCTTCTCCATCTCCTCCGGTGAAGCCAACAGATCCAGGAATGTTCAGGACGATTGATGAAGTGACCCCACCTCCAACAGCTACTGATTACTTGTTCTCAAAACAACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATGTACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTGCTGCTGCAAACCTTGCACAACTGCGCATCGCAGATCTGAAGAAGAATAGTAAGGCTTATGAGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCCTCAATCCGAAGTGACACAGAAACCAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTCGCCATTGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCTCGTCAAAACCTTGAGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCGAAG TGCCTGCG ATGTTGCATCTTCAGCCTTGTTTAATCTTGAATTTGGCTGTTGCCGGGATATTCTGTGTATGCTGAGTTGATACTTAAAGGGGGGTACTGGCGGGGTACTGGCGTACTGCAGTTTTACTAGGTCACTGCATGGCTTGTTCAATGTCTGTAAATTGTAAATGTGTGCTGCTTGTACCAAATTTGTGATACATTTTACCACCTCCACAAGAAATTTAAAAAAATAAAGGTGAACAT                                   ]
[+] EMBL OSS5001A             [                                                                                                                                                              TTGCGCTGCTGCTGCTGCGAGAGATCGATCGAGAAGGCGCGAACCATTCTCCCCCCTCTCGGATCGGCGGGTCGAATTGGGGCGGAGGAGATGCTGGACGCCTTCTTCAAGGGNGCCGGTGG GGCGGCGGCGGGTTCCGCNGCGCAAAGTGCAAGACGCTGCTGAAGCTGTCGATCCCGCGGATCAAGCTGCTGCGGAACAGGCGGGAGCTGCAGCTGCGGCAGATGCGGCGGGACATCGCCAAGCTGCTCGAGGCCGGCCAGGAGTCCANCGCGCGAATCAGGGTGGAGCACATCATCCGGGAGGAGAACATGATGGCCNCGCAGGAGATTCTTNAGCTCTTCTGCcnagc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA997830             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTGCGAGCTCATCGCCGTCCGCTTGCCCATCATCGAGACGCAAAAGGAGTGCCCTATAGATCTCAAAGAAGCTATATCCAGCATATGTTTCGCTGCTCCCAGATGTGCAGATCTGCCTGAACTTATGCAAGTTCAGATGATGTTTGCAACTATTTACGGGAAAGAGTTTGTTGCTGCAGCTACAGAGTTGATGCCAGATTGTGGGGTCAATCGGCAGATAATTGAACTACTTTCTATCCGTGCTCCTCCTGTTGATGTAAAGATGAAGCTGCTGAAAGAGATTGCTGAGGAGCATGAGATTGATTGGGATCCATCAGCCACAGAGACAGAATATCTTAAACCACATGAGGATCTATTGAATGGACCAACCTACTTCAATGGTTCTACACTTCCTCTTCCAAAGGAGAAACATGAGGAAACACTAGCTGCAAGTGCTGCCGAACATCCTGATGAAGACTATGAGTCTGATACTGGTTTAGAGTCATTGGATTTGCCTGAAGTCCCAAAAGCAGCCATTCGCCCACCTTCTGATACTCCAGCAACCCCTGATATTGACACACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK119224             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAGAGATTGCTGAGGAGCATGAGATTGATTGGGATCCATCAGCCACAGAGACAGAATATCTTAAACCACATGAGGATCTATTGAATGGACCAACCTACTTCAATGGTTCTACACTTCCTCTTCCAAAGGAGAAACATGAGGAAACACTAGCTGCAAGTGCTGCCGAACATCCTGATGAAGACTATGAGTCTGATACTGGTTTAGAGTCATTGGATTTGCCTGAAGTCCCAAAAGCAGCCATTCGCCCACCTTCTGATACTCCAGCAACCCCTGATATTGACACACACGTGCAAAGCTCCCAGCCAACTTCTCATGAATTCTCAAACATGCCAAGCTCCCAACCAACTTCTCATGAATTCTTAAACATGCCAAGCTCCCAGCCATCTTCTCATGAATTCTCAAACATTAAAAGCTCCCAGACAACTTCTCATGAATT CTCAAATGTTCAAACCTCCCAGTTGGCTTCGCATGAATTCTCAAACCCAAGTGACTTGGAAGAGAATCCAACAGCTAATGCTGCTTTCATGACTCAGCCAAAAGGTTCAGAACATATTCCTACACCATTCGCTCAACCAAGTATGCCAGTTTCACCCAATGAAAAGAAACATTTTGTTCCATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAAATGAGTCCATTCCGTCACCTTCTCCATCTCCTCCGGTGAAGCCAACAGATCCAGGAATGTTCAGGACGATTGATGAAGTGACCCCACCTCCAACAGCTACTGATTACTTGTTCTCAAAACAACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATGTACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTGCTGCTGCAAACCTTGCACAACTGCGCATCGCAGATCTGAAGAAGAATAGTAAGGCTTATGAGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCCTCAATCCGAAGTGACACAGAAACCAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTCGCCATTGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCTCGTCAAAACCTTGAGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCGAAG TGCCTGCG ATGTTGCATCTTCAGCCTTGTTTAATCTTGAATTTGGCTGTTGCCGGGATATTCTGTGTATGCTGAGTTGATACTTAAAGGGGGGTACTGGCGGGGTACTGGCGTACTGCAGTTTTACTAGGTCACTGCATGGCTTGTTCAATGTCTGTAAATTGTAAATGTGTGCTGCTTGTACCAAATTTGTGATACATTTTACCACCTCCACAAGAAATTTAAAAAAATAAAGGTGAACATT                                  ]
[+] EMBL CB662717             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATGAATTCCTC TATGTTCAAACCTCCCAGTTGGCTTCGCATGAATTCTCAAACCCAAGTGACTTGGAAGAGAATCCAACAGCTCCTGCTGCTTTCATGACTCAGCCAAAAGGTTCAGAACATATTCCTACACCATTCGCTCAACCAAGTATGCCAGTTTCACCCAATGAAAAGAAACATTTTGTTCCATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAAATGAGTCCATTCCGTCACCTTCTCCATCTCCTCCGGTGAAGCCAACAGATCCAGGAATGTTCAGGACGATTGATGAAGTGACCCCACCTCCAACAGCTACTGATTACTTGTTCTCAAAACAACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATGTACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTGCTGCTGCAAACCTTGCACAACTGCGCATCGCAGATCTGAAGAAGAATAGTAAGGCTTATGAGAACTACAGTGACAGCGTCCGAAAGGAAAGCCATCCTCAATCCGAAGTGACACAGAAACCAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTCGCCATTGATGGAAGATGATCCGTATTTCTCCT                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AA751126             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTCGCCATTGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCTCGTCAAAACCTTGAGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCGAAGCTGCCTGCGTATGTTGCATC TCAG  TTGTTat                                                                                                                                                                                                                                                     ]
[-] EMBL OSC636               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGGTGGAAACTCGGTGCNACTTAGTTCNTCAGCATAGTTCGAAG TGCCTGCG ATGTTGCATCTTCAGCCTTGGTTAATCTTGAATTTGGCTGTTGCCGGGATATTCTGTGTATGCTGAGNTGATACTTAAAGGGGGGTACTGGCGGGGTACTGGCGTACTGGAGTTTTACTAGGTCACTGCATGGCTTGNTCAATGTCTGNNAATTGTAAATGTGTGCTGNTTGTACCAAATTTNTGATACATTTTACCACCTCCACNANGAATTTTNAAAAATAAAGGTGAACANTATGACTTGNTTAAAAAAAAANCCAAGCGTCNCGG]




>consensus_12724#0
TACGGCCCAGATCCCTCCAAAAGTGGAGCAGGTTCGGGCTAAGGCTACGCGTCGCCGCCG
CGGCCGCCTCCACCTCATCATCTCCCACCTCTCGCCGTCGCCGCCGCTGCTATTTAGATC
GAATCGAATCGAATCCCACGCGGCGCGGAGCCCTCCACTTGCGCTGCTGCTGCTGCGAGA
GATCGATCGAGAAGGCGCGAACCATTCTCCCCCCTCTCGGATCGGCGGGTCGAATTGGGG
CGGAGGAGATGCTGGACGCCTTCTTCAAGGGCGCCGGTGGCGGCGGCGGCGGGTTCCGCG
GCGCAAAGTGCAAGACGCTGCTGAAGCTGTCGATCCCGCGGATCAAGCTGCTGCGGAACA
GGCGGGAGCTGCAGCTGCGGCAGATGCGGCGGGACATCGCCAAGCTGCTCGAGGCCGGCC
AGGAGGCCACCGCGCGAATCAGGGTGGAGCACATCATCCGGGAGGAGAACATGATGGCCG
CGCAGGAGATTCTTGAGCTCTTCTGCGAGCTCATCGCCGTCCGCTTGCCCATCATCGAGA
CGCAAAAGGAGTGCCCTATAGATCTCAAAGAAGCTATATCCAGCATATGTTTCGCTGCTC
CCAGATGTGCAGATCTGCCTGAACTTATGCAAGTTCAGATGATGTTTGCAACTAAATACG
GGAAAGAGTTTGTTGCTGCAGCTACAGAGTTGATGCCAGATTGTGGGGTCAATCGGCAGA
TAATTGAACTACTTTCTATCCGTGCTCCTCCTGTTGATGTAAAGATGAAGCTGCTGAAAG
AGATTGCTGAGGAGCATGAGATTGATTGGGATCCATCAGCCACAGAGACAGAATATCTTA
AACCACATGAGGATCTATTGAATGGACCAACCTACTTCAATGGTTCTACACTTCCTCTTC
CAAAGGAGAAACATGAGGAAACACTAGCTGCAAGTGCTGCCGAACATCCTGATGAAGACT
ATGAGTCTGATACTGGTTTAGAGTCATTGGATTTGCCTGAAGTCCCAAAAGCAGCCATTC
GCCCACCTTCTGATACTCCAGCAACCCCTGATATTGACACACACGTGCAAAGCTCCCAGC
CAACTTCTCATGAATTCTCAAACATGCCAAGCTCCCAACCAACTTCTCATGAATTCTTAA
ACATGCCAAGCTCCCAGCCATCTTCTCATGAATTCTCAAACATTAAAAGCTCCCAGACAA
CTTCTCATGAATTCTCAAATGTTCAAACCTCCCAGTTGGCTTCGCATGAATTCTCAAACC
CAAGTGACTTGGAAGAGAATCCAACAGCTAATGCTGCTTTCATGACTCAGCCAAAAGGTT
CAGAACATATTCCTACACCATTCGCTCAACCAAGTATGCCAGTTTCACCCAATGAAAAGA
AACATTTTGTTCCATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAA
ATGAGTCCATTCCGTCACCTTCTCCATCTCCTCCGGTGAAGCCAACAGATCCAGGAATGT
TCAGGACGATTGATGAAGTGACCCCACCTCCAACAGCTACTGATTACTTGTTCTCAAAAC
AACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATG
TACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTG
CTGCTGCAAACCTTGCACAACTGCGCATCGCAGATCTGAAGAAGAATAGTAAGGCTTATG
AGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCCTCAATCCGAAGTGACACAGAAAC
CAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATT
TGCCCCAGAGGTCGCCATTGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCT
CGTCAAAACCTTGAGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCGAAGTG
CCTGCGATGTTGCATCTTCAGCCTTGTTTAATCTTGAATTTGGCTGTTGCCGGGATATTC
TGTGTATGCTGAGTTGATACTTAAAGGGGGGTACTGGCGGGGTACTGGCGTACTGCAGTT
TTACTAGGTCACTGCATGGCTTGTTCAATGTCTGTAAATTGTAAATGTGTGCTGCTTGTA
CCAAATTTGTGATACATTTTACCACCTCCACAAGAAATTTAAAAAAATAAAGGTGAACAT
TATGACTTGNTTAAAAAAAAANCCAAGCGTCNCGG

consensusID : consensus_12724#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 825
fasta sequence

                              [ATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAAATGAGTCCATTCCGTCACCTTCTCCATCTCCTGCGGTGAAGCCAACAGATCCAGAAATGTTCAGGACGATTGATGAAGTGACCCCACCTCCAACAACTACTGATTACTTGTTCTCAAAACAACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATGTACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTGCTGCTGCAAACCTTGCACAACTGCGCATTGCAGATCTGAAGAAGAATAGTAAGGCTTATGAGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCATCAATCCGAAGTGACACAGAAACCAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTCGCCATCGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCTCATCAAAACCTTGAGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCAAAGTGCCTGCGATGTTGCATCTTCAGCCTTGTTTAATCTTGAATTTGGCTGTTGCCGGGATACTGTGTATGCTGAGTTGATACTTAAAGGGGGGTACTGGCGTACTGCAGTTTTACTAGGTCACTGCATGGCTTGTTCAATGTCTGTAAATTGTAAATGTGTGCTGCTTGTACCAAAT-TTGTGATA-CATTTTACCACCTCCACAAGAAATTTTAAAAAATAAAGGTGAACATTGTTCCTTGCT]

[-] EMBL CB628088             [ATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAAATGAGTCCATTCCGTCACCTTCTCCATCTCCTGCGGTGAAGCCAACAGATCCAGAAATGTTCAGGACGATTGATGAAGTGACCCCACCTCCAACAACTACTGATTACTTGTTCTCAAAACAACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATGTACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTGCTGCTGCAAACCTTGCACAACTGCGCATTGCAGATCTGAAGAAGAATAGTAAGGCTTATGAGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCATCAATCCGAAGTGACACAGAAACCAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTCGCCATCGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCTCATCAAAACCTTGAGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCAAAGTGCCTGCGATGTTGCATCTTCAGCCTTGTTTAATCTTGAATTTGGCTGTTGCCGGGATACTGTGTATGCTGAGTTGATACTTAAAGGGGGGTACTGGCGTACTGCAGTTTTACTAGGTCACTGCATGGCTTGTTCAATGTCTGTAAATTGTAAATGTGTGCTGCTTGTACCAAAT TTGTGATA CATTTTACCACCTCCACAAGAAATTTTAAAAAATAAAGGTGAACATTGTTCCTTGCT]
[-] EMBL CB628087             [                                                                                                        TGTTCAGGACGATTGATGAAGTGACCCCACCTCCAACAACTAATGATTACTTGTTCTCAAAACAACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATGTACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTGCTGCTGCAAACCTTGCACAACTGCGCATTGCAGATCTGAAGAAGAATAGTAAGGCTTATGAGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCATCAATCCGAAGTGACACAGAAACCAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTCGCCATCGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCTCATCAAAACCTTGAGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCAAAGTGCCTGCGATGTTGCATCTTCAGCCTTGTTTAATCTTGAATTTGGCTGTTGCCGGGATACTGTGTATGCTGAGTTGATACTTAAAGGGGGGTACTGGCGTACTGCAGTTTTACTAGGTCACTGCATGGCTTGTTCAATGTCTGTAAATTGTAAATGTGTGCTGCTTGTACCAAATCTTGTGATACCATTTTACCACCTCCACAAGAAAAAGGGAAAAATAAAGGTGAACAT           ]




>consensus_12724#1
ATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAAATGAGTCCATTCC
GTCACCTTCTCCATCTCCTGCGGTGAAGCCAACAGATCCAGAAATGTTCAGGACGATTGA
TGAAGTGACCCCACCTCCAACAACTACTGATTACTTGTTCTCAAAACAACCAGAACAGTT
ACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATGTACTTTCTGCTGC
CCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTGCTGCTGCAAACCT
TGCACAACTGCGCATTGCAGATCTGAAGAAGAATAGTAAGGCTTATGAGAACTACAGTGA
CAGTGTCCGAAAGGAAAGCCATCATCAATCCGAAGTGACACAGAAACCAGTATTTGATCA
CCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTC
GCCATCGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCTCATCAAAACCTTG
AGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCAAAGTGCCTGCGATGTTGC
ATCTTCAGCCTTGTTTAATCTTGAATTTGGCTGTTGCCGGGATACTGTGTATGCTGAGTT
GATACTTAAAGGGGGGTACTGGCGTACTGCAGTTTTACTAGGTCACTGCATGGCTTGTTC
AATGTCTGTAAATTGTAAATGTGTGCTGCTTGTACCAAATTTGTGATACATTTTACCACC
TCCACAAGAAATTTTAAAAAATAAAGGTGAACATTGTTCCTTGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12724#0      TACGGCCCAGATCCCTCCAAAAGTGGAGCAGGTTCGGGCTAAGGCTACGCGTCGCCGCCG 60
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      CGGCCGCCTCCACCTCATCATCTCCCACCTCTCGCCGTCGCCGCCGCTGCTATTTAGATC 120
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      GAATCGAATCGAATCCCACGCGGCGCGGAGCCCTCCACTTGCGCTGCTGCTGCTGCGAGA 180
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      GATCGATCGAGAAGGCGCGAACCATTCTCCCCCCTCTCGGATCGGCGGGTCGAATTGGGG 240
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      CGGAGGAGATGCTGGACGCCTTCTTCAAGGGCGCCGGTGGCGGCGGCGGCGGGTTCCGCG 300
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      GCGCAAAGTGCAAGACGCTGCTGAAGCTGTCGATCCCGCGGATCAAGCTGCTGCGGAACA 360
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      GGCGGGAGCTGCAGCTGCGGCAGATGCGGCGGGACATCGCCAAGCTGCTCGAGGCCGGCC 420
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      AGGAGGCCACCGCGCGAATCAGGGTGGAGCACATCATCCGGGAGGAGAACATGATGGCCG 480
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      CGCAGGAGATTCTTGAGCTCTTCTGCGAGCTCATCGCCGTCCGCTTGCCCATCATCGAGA 540
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      CGCAAAAGGAGTGCCCTATAGATCTCAAAGAAGCTATATCCAGCATATGTTTCGCTGCTC 600
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      CCAGATGTGCAGATCTGCCTGAACTTATGCAAGTTCAGATGATGTTTGCAACTAAATACG 660
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      GGAAAGAGTTTGTTGCTGCAGCTACAGAGTTGATGCCAGATTGTGGGGTCAATCGGCAGA 720
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      TAATTGAACTACTTTCTATCCGTGCTCCTCCTGTTGATGTAAAGATGAAGCTGCTGAAAG 780
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      AGATTGCTGAGGAGCATGAGATTGATTGGGATCCATCAGCCACAGAGACAGAATATCTTA 840
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      AACCACATGAGGATCTATTGAATGGACCAACCTACTTCAATGGTTCTACACTTCCTCTTC 900
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      CAAAGGAGAAACATGAGGAAACACTAGCTGCAAGTGCTGCCGAACATCCTGATGAAGACT 960
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      ATGAGTCTGATACTGGTTTAGAGTCATTGGATTTGCCTGAAGTCCCAAAAGCAGCCATTC 1020
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      GCCCACCTTCTGATACTCCAGCAACCCCTGATATTGACACACACGTGCAAAGCTCCCAGC 1080
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      CAACTTCTCATGAATTCTCAAACATGCCAAGCTCCCAACCAACTTCTCATGAATTCTTAA 1140
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      ACATGCCAAGCTCCCAGCCATCTTCTCATGAATTCTCAAACATTAAAAGCTCCCAGACAA 1200
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      CTTCTCATGAATTCTCAAATGTTCAAACCTCCCAGTTGGCTTCGCATGAATTCTCAAACC 1260
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      CAAGTGACTTGGAAGAGAATCCAACAGCTAATGCTGCTTTCATGACTCAGCCAAAAGGTT 1320
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      CAGAACATATTCCTACACCATTCGCTCAACCAAGTATGCCAGTTTCACCCAATGAAAAGA 1380
consensus_12724#1      ------------------------------------------------------------
                                                                                   

consensus_12724#0      AACATTTTGTTCCATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAA 1440
consensus_12724#1      -------------ATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAA 47
                                    ***********************************************

consensus_12724#0      ATGAGTCCATTCCGTCACCTTCTCCATCTCCTCCGGTGAAGCCAACAGATCCAGGAATGT 1500
consensus_12724#1      ATGAGTCCATTCCGTCACCTTCTCCATCTCCTGCGGTGAAGCCAACAGATCCAGAAATGT 107
                       ******************************** ********************* *****

consensus_12724#0      TCAGGACGATTGATGAAGTGACCCCACCTCCAACAGCTACTGATTACTTGTTCTCAAAAC 1560
consensus_12724#1      TCAGGACGATTGATGAAGTGACCCCACCTCCAACAACTACTGATTACTTGTTCTCAAAAC 167
                       *********************************** ************************

consensus_12724#0      AACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATG 1620
consensus_12724#1      AACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATG 227
                       ************************************************************

consensus_12724#0      TACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTG 1680
consensus_12724#1      TACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTG 287
                       ************************************************************

consensus_12724#0      CTGCTGCAAACCTTGCACAACTGCGCATCGCAGATCTGAAGAAGAATAGTAAGGCTTATG 1740
consensus_12724#1      CTGCTGCAAACCTTGCACAACTGCGCATTGCAGATCTGAAGAAGAATAGTAAGGCTTATG 347
                       **************************** *******************************

consensus_12724#0      AGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCCTCAATCCGAAGTGACACAGAAAC 1800
consensus_12724#1      AGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCATCAATCCGAAGTGACACAGAAAC 407
                       ************************************ ***********************

consensus_12724#0      CAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATT 1860
consensus_12724#1      CAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATT 467
                       ************************************************************

consensus_12724#0      TGCCCCAGAGGTCGCCATTGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCT 1920
consensus_12724#1      TGCCCCAGAGGTCGCCATCGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCT 527
                       ****************** *****************************************

consensus_12724#0      CGTCAAAACCTTGAGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCGAAGTG 1980
consensus_12724#1      CATCAAAACCTTGAGGGTGGAAACTCGGTGCGACTTAGTTCTTCAGCATAGTTCAAAGTG 587
                       * **************************************************** *****

consensus_12724#0      CCTGCGATGTTGCATCTTCAGCCTTGTTTAATCTTGAATTTGGCTGTTGCCGGGATATTC 2040
consensus_12724#1      CCTGCGATGTTGCATCTTCAGCCTTGTTTAATCTTGAATTTGGCTGTTGCCGGGATA--C 645
                       *********************************************************  *

consensus_12724#0      TGTGTATGCTGAGTTGATACTTAAAGGGGGGTACTGGCGGGGTACTGGCGTACTGCAGTT 2100
consensus_12724#1      TGTGTATGCTGAGTTGATACTTAAAGGGGGGTACTGGCG-----------TACTGCAGTT 694
                       ***************************************           **********

consensus_12724#0      TTACTAGGTCACTGCATGGCTTGTTCAATGTCTGTAAATTGTAAATGTGTGCTGCTTGTA 2160
consensus_12724#1      TTACTAGGTCACTGCATGGCTTGTTCAATGTCTGTAAATTGTAAATGTGTGCTGCTTGTA 754
                       ************************************************************

consensus_12724#0      CCAAATTTGTGATACATTTTACCACCTCCACAAGAAATTTAAAAAAATAAAGGTGAACAT 2220
consensus_12724#1      CCAAATTTGTGATACATTTTACCACCTCCACAAGAAATTTTAAAAAATAAAGGTGAACAT 814
                       **************************************** *******************

consensus_12724#0      TATGACTTGNTTAAAAAAAAANCCAAGCGTCNCGG 2255
consensus_12724#1      TGTTCCTTGCT------------------------ 825
                       * *  **** *