These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12741#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3247 fasta sequence [GCCCGATCCACTGCTCTCCCCACCGGTGGTGAGTCACCACGCTGCGTGGCAAACCCTAGTTAACCGGCGCGGCGTCCGGCGACCGTACACTCGGCGGAGGCCGCAGAGCGGCAGCGGCAGGCGGCGGTGCCGCCGAGGGCAGTCGGCTCGGCTCCCGCGGCAAAGCGGGAACGGGAGAGAGAGCAGGGCGGCACACGCGCGCGCTGAGGCTGCGCGCGGTGGG-CGCGGCGTCCGGCGATGCCCGGGCAAGAGCTATAGGAAGGCGAAGTCGTGGGCTACAGCCCCAGTCCCCAGTGCTAAGGCAGTTTCTGATTACCCAAGTGTAGATGTGATGGACACCCATCACAGCGATCAATATGCAAAGAGCAGCCTGCAGCTGCAATTCAGGGACACCTCTGTTTCCTTTGAAAACAACAATTCTGTTTTGGATAAGCATGATATTACAAGCCCTCAAGTTGGCATGACTTTTGAGACAGCCGATTTGGCATATCGGTTCTACTTAGAATATGGCTACCGTGCAGGGTTCGGGGTCTCAAAGAGGACTTCCCATAGTGTTGATGGGGTGAAATACCGTGCAACATTTGTTTGTTACAAAGGCGGCATTGCTAGGATCAAGCCTGGTCTCAAAGCTCGAAGGAGGCTTGTTGCAAAGACTGGTTGCAAAGCAATGATGGTAGTCAAGTATAACACAACTGAAAACCAGTGGGAGGTAGTTTTTGTTGAGCTGGAGCATAACCATCCATGTAATCCTGAAATGGTTAGATTCATGATGTGCTTTAAAGATCTCCCTGACTGGCAGAGGGAGCACCGCCCATTCAATGCCAAGACTAGATTGAATCCAAAGATTCACTCTGGCAGAGGCAGGCCACCCAACCAAAACAAAGACTTCATGGTGAAAAAAACCTTCTCACAATCAAATTATTCCATTGAAGCAGCAGGCAAGGCTGGAAAGCTGAGATTTGCAGAGGGTGATGTTGAGGCACTCTTGGTCTTCTTTGATAAGATGCAAGCTCAAAATTCAAACTTTTTCTACAACTGGGACATGGATGATGAAGGTCGGCTCAAGAATGTTTGCTGGGTCGATGCTAGATCGAGAGCTGCATACCAGCACTTCTGTGATGTTGTTTGCTTTGATACTGTTTATTTGACATACCAATTTGTCATTCCATTGGTTGCTTTTCTTGGAATCAACCATCATGGGCAATTTGTGTTGTTGGGATGCGGTTTACTTGGGGACGAATCTCCAGAGACTTTTTCTTGGTTATTCAAGAAATGGCTAAAATGTATGAATGATAAATCACCTGAAGCAATTATTACCACCCACTCAAGACCAGTGGTCAAAGCTGTTGCTGAGGTATTTCCAAATACTCGTCACAGATACAATCTTTGGCATATCATGAAAGAGCTTCCTGAAATGTCTGGAAGAGTTGAGGATAAGGAGGCAATTAGCCTAAGAATGAAAAAGGTAGTCTTCGACACTATTACATCAACTGATTTTGAGAGGGAATGGGTTGAGATGGTCAATCAGTATAACCTTCATGATAATCATTGGCTTACAACCTTATTTGAAGAGAGGGCAAAATGGGTACCAGCATATGTCAAGGATACTTTCTGGGCTGGTATATCCACTGTTCGCCGCAGTGAGCGGTTGGAGGCCTTTTTTTGATGGATACATTACACCAGAGACCACAATTAAGACATTTATTGAACAATTTGATACTGCTATGAAGCTTAGGTCTGACCGAGAAGCGTATGATGATTTTCGCTCATTTCAGCAAAGGCCTCAAGTCTTGTCTGGTCTACTCTTTGAGGAGCAATTTGCAAATGTTTATACAATAAATATGTTTCAGAAGTTCCAAGATCACTTGAAGCAGCTGATGAACGTGACTTGCACTGAAGTCAGTAGGAATGGATCAATAGTGACTTACACTGTGACCGTCATTGGTAAGGAGAGGAAGTATGACTACAAAGTGATGTATAACAGTGCTGAGAAAGAGGTGTGGTGTATCTGCAGGTCCTTCCAG-TTTAAAGGTATTTTGTGTAGCCATGCTCTTGCTGTCTTGAGACAGGAACTTGTGATGCTGATACCTTATAAATATATTCTCGATCGCTGGAGGAAGGACTACAAATGCCCCGAGGAATCCAAGGAAACTCCCATCTCACCAAAAGCGATCAAAGCTACAGGGAAGGGCACAAAACCGGAAAATGCCCGTGAAGATAAAGTGGACAATCTGTACAAGCATGGTCACCAGTACTTTGCTGACATTGTGGAAATGGGAGCAACGGACCCTGATGCAATGGAGTATGTTTTGTCGGTCATGAAAGAAGCCAAAGAGAAGGTACGGAAGTTCGAGGAATCTCGAAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTACTGGTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGAGGATGGGGGCAATGGCATATCAGATTCAACACCTGCGACTACAACAGTGGCGACAGTCGCGGTGGCCACATCTACAACAATGCAGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGTTTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGATGTTCCTAATACTGATTATGCCTAACTCAAATTTAGTCCTACAAGCTGCACCAGGCCCTCCTGTCCATGTGTAAT-AATGGTTTATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGAATTATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATATGGAAAGTAATGTATTATGTATGTAGTGCAGCTTAGGAATGTTAGTCTCTGTTTCTGCTCATGTGGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCCTTGCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGATGTAATCACACTGAACTTTATTGCCAACCACTAATGCTTAGTTTCATCTTATGCCGTTGGCTGTTGCACTGAGCCCTGAGCATTATTTTCATCGTATGCAAGCTCACCATTTCTTGTCATAAAAAAAAA] [+] EMBL AK101478 [GCCCGATCCACTGCTCTCCCCACCGGTGGTGAGTCACCACGCTGCGTGGCAAACCCTAGTTAACCGGCGCGGCGTCCGGCGACCGTACACTCGGCGGAGGCCGCAGAGCGGCAGCGGCAGGCGGCGGTGCCGCCGAGGGCAGTCGGCTCGGCTCCCGCGGCAAAGCGGGAACGGGAGAGAGAGCAGGGCGGCACACGCGCGCGCTGAGGCTGCGCGCGGTGGG CGCGGCGTCCGGCGATGCCCGGGCAAGAGCTATAGGAAGGCGAAGTCGTGGGCTACAGCCCCAGTCCCCAGTGCTAAGGCAGTTTCTGATTACCCAAGTGTAGATGTGATGGACACCCATCACAGCGATCAATATGCAAAGAGCAGCCTGCAGCTGCAATTCAGGGACACCTCTGTTTCCTTTGAAAACAACAATTCTGTTTTGGATAAGCATGATATTACAAGCCCTCAAGTTGGCATGACTTTTGAGACAGCCGATTTGGCATATCGGTTCTACTTAGAATATGGCTACCGTGCAGGGTTCGGGGTCTCAAAGAGGACTTCCCATAGTGTTGATGGGGTGAAATACCGTGCAACATTTGTTTGTTACAAAGGCGGCATTGCTAGGATCAAGCCTGGTCTCAAAGCTCGAAGGAGGCTTGTTGCAAAGACTGGTTGCAAAGCAATGATGGTAGTCAAGTATAACACAACTGAAAACCAGTGGGAGGTAGTTTTTGTTGAGCTGGAGCATAACCATCCATGTAATCCTGAAATGGTTAGATTCATGATGTGCTTTAAAGATCTCCCTGACTGGCAGAGGGAGCACCGCCCATTCAATGCCAAGACTAGATTGAATCCAAAGATTCACTCTGGCAGAGGCAGGCCACCCAACCAAAACAAAGACTTCATGGTGAAAAAAACCTTCTCACAATCAAATTATTCCATTGAAGCAGCAGGCAAGGCTGGAAAGCTGAGATTTGCAGAGGGTGATGTTGAGGCACTCTTGGTCTTCTTTGATAAGATGCAAGCTCAAAATTCAAACTTTTTCTACAACTGGGACATGGATGATGAAGGTCGGCTCAGGAATGTTTGCTGGGTCGATGCTAGATCGAGAGCTGCATACCAGCACTTCTGTGATGTTGTTTGCTTTGATACTGTTTATTTGACATACCAATTTGTCATTCCATTGGTTGCTTTTCTTGGAATCAACCATCATGGGCAATTTGTGTTGTTGGGATGCGGTTTACTTGGGGACGAATCTCCAGAGACTTTTTCTTGGTTATTCAAGAAATGGCTAAAATGTATGAATGATAAATCACCTGAAGCAATTATTACCACCCACTCAAGACCAGTGGTCAAAGCTGTTGCTGAGGTATTTCCAAATACTCGTCACAGATACAATCTTTGGCATATCATGAAAGAGCTTCCTGAAATGTCTGGAAGAGTTGAGGATAAGGAGGCAATTAGCCTAAGAATGAAAAAGGTAGTCTTCGACACTATTACATCAACTGATTTTGAGAGGGAATGGGTTGAGATGGTCAATCAGTATAACCTTCATGATAATCATTGGCTTACAACCTTATTTGAAGAGAGGGCAAAATGGGTACCAGCATATGTCAAGGATACTTTCTGGGCTGGTATATCCACTGTTCGCCGCAGTGAGCGGTTGGAGGCCTTTTTTTGATGGATACATTACACCAGAGACCACAATTAAGACATTTATTGAACAATTTGATACTGCTATGAAGCTTAGGTCTGACCGAGAAGCGTATGGTGATTTTCGCTCATTTCAGCAAAGGCCTCAAGTCTTGTCTGGTCTACTCTTTGAGGAGCAATTTGCAAATGTTTATACAATAAATATGTTTCAGAAGTTCCAAGATCACTTGAAGCAGCTGATGAACGTGACTTGCACTGAAGTCAGTAGGAATGGATCAATAGTGACTTACACTGTGACCGTCATTGGTAAGGAGAGGAAGTATGACTACAAAGTGATGTATAACAGTGCTGAGAAAGAGGTGTGGTGTATCTGCAGGTCCTTCCAG TTTAAAGGTATTTTGTGTAGCCATGCTCTTGCTGTCTTGAGACAGGAACTTGTGATGCTGATACCTTATAAATATATTCTCGATCGCTGGAGGAAGGACTACAAATGCCCCGAGGAATCCAAGGAAACTCCCATCTCACCAAAAGCGATCAAAGCTACAGGGAAGGGCACAAAACCGGAAAATGCCCGTGAAGATAAAGTGGACAATCTGTACAAGCATGGTCACCAGTACTTTGCTGACATTGTGGAAATGGGAGCAACGGACCCTGATGCAATGGAGTATGTTTTGTCGGTCATGAAAGAAGCCAAAGAGAAGGTACGGAAGTTCGAGGAATCTCGAAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTACTGGTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGAGGATGGGGGCAATGGCATATCAGATTCAACACCTGCGACTACAACAGTGGCGACAGTCGCGGTGGCCACATCTACAACAATGCAGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGTTTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGATGTTCCTAATACTGATTATGCCTAACTCAAATTTAGTCCTACAAGCTGCACCAGGCCCTCCTGTCCATGTGTAAT AATGGTTTATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGAATTATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATATGGAAAGTAATGTATTATGTATGTAGTGCAGCTTAGGAATGTTAGTCTCTGTTTCTGCTCATGTGGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCCTTGCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGATGTAATCACACTGAACTTTATTGCCAACCACTAATGCTTAGTTTCATCTTATGCCGTTGGC ] [+] EMBL CB649424 [ TCCCCACCGGTGGTGAGTCACCACGCTGCGTGGCAAACCCTAGTTAACCGGCGCGGCGTCCGGCGACCGTACACTCGGCGGAGGCCGCAGAGCGGCATCGGCAGGCGGCGGTGCCGCCGAGGGCAGTCTGCTCGGCTCCCGCGGCAAAGCGGGAACGGGAGAGAGAGCAGGGCGGCACACGCGCGCGCTGAGGCTGCGCGCGGTGGG CGCGGCGTCCGGCGATGCCCGGGCAAGAGCTATAGGAAGGCGAAGTCGTGGGCTACAGCCCCAGTCCCCAGTGCTAAGGCAGTTTCTGATTACCCAAGTGTAGATGTGATGGACACCCATCACAGCGATCAATATGCAAAGAGCAGCCTGCATCTGCAATTCAGGGACACCTCTGTTTCCTTTGAAAACAACAATTCTGTTTTGGATAAGCATGATATTACAAGCCCTCAAGTTGGCATGACTTTTGAGACAGCCGATTTGGCATATCGGTTCTACTTAGAATATGGCTACCGTGCAGGGTTCGGGGTCTCAAAGAGGACTTCCCATAGTGTTGATGGGGTGAAATACCGTGCAACATTTGTTTGTTACAAAGGCGGCATTGCTAGGATCAAGCCTGGTCTCAAAGCTCGAAGGAGGCTTGTTGCAAAGACTGGTTGCAAAGCAATGATGGTAGTCAAGTATAACACAACTGAAAACCAGTGGGAGGTAGTTTTTGTTGAGCTGGAGCATAACCATCCATGTAATCCTGAAATGGTTAGATTCATGATGTGCTTTACAGATCTCCCTGACTGGCAGAGGGAGCACCG ] [+] EMBL AK065827 [ GGCGCGGCGTCCGGCGACCGTACACTCGGCGGAGGCCGCAGAGCGGCAGCGGCAGGCGGCGGTGCCGCCGAGGGCAGTCGGCTCGGCTCCCGCGGCAAAGCGGGAACGGGAGAGAGAGCAGGGCGGCACACGCGCGCGCTGAGGCTGCGCGCGGTGGGCCGCGGCGTCCGGCGATGCCCGGGCAAGAGCTATAGGAAGGCGAAGTCGTGGGCTACAGCCCCAGTCCCCAGTGCTAAGGCAGTTTCTGATTACCCAAGTGTAGATGTGATGGACACCCATCACAGCGATCAATATGCAAAGAGCAGCCTGCAGCTGCAATTCAGGGACACCTCTGTTTCCTTTGAAAACAACAATTCTGTTTTGGATAAGCATGATATTACAAGCCCTCAAGTTGGCATGACTTTTGAGACAGCCGATTTGGCATATCGGTTCTACTTAGAATATGGCTACCGTGCAGGGTTCGGGGTCTCAAAGAGGACTTCCCATAGTGTTGATGGGGTGAAATACCGTGCAACATTTGTTTGTTACAAAGGCGGCATTGCTAGGATCAAGCCTGGTCTCAAAGCTCGAAGGAGGCTTGTTGCAAAGACTGGTTGCAAAGCAATGATGGTAGTCAAGTATAACACAACTGAAAACCAGTGGGAGGTAGTTTTTGTTGAGCTGGAGCATAACCATCCATGTAATCCTGAAATGGTTAGATTCATGATGTGCTTTAAAGATCTCCCTGACTGGCAGAGGGAGCACCGCCCATTCAATGCCAAGACTAGATTGAATCCAAAGATTCACTCTGGCAGAGGCAGGCCACCCAACCAAAACAAAGACTTCATGGTGAAAAAAACCTTCTCACAATCAAATTATTCCATTGAAGCAGCAGGCAAGGCTGGAAAGCTGAGATTTGCAGAGGGTGATGTTGAGGCACTCTTGGTCTTCTTTGATAAGATGCAAGCTCAAAATTCAAACTTTTTCTACAACTGGGACATGGATGATGAAGGTCGGCTCAAGAATGTTTGCTGGGTCGATGCTAGATCGAGAGCTGCATACCAGCACTTCTGTGATGTTGTTTGCTTTGATACTGTTTATTTGACATACCAATTTGTCATTCCATTGGTTGCTTTTCTTGGAATCAACCATCATGGGCAATTTGTGTTGTTGGGATGCGGTTTACTTGGGGACGAATCTCCAGAGACTTTTTCTTGGTTATTCAAGAAATGGCTAAAATGTATGAATGATAAATCACCTGAAGCAATTATTACCACCCACTCAAGACCAGTGGTCAAAGCTGTTGCTGAGGTATTTCCAAATACTCGTCACAGATACAATCTTTGGCATATCATGAAAGAGCTTCCTGAAATGTCTGGAAGAGTTGAGGATAAGGAGGCAATTAGCCTAAGAATGAAAAAGGTAGTCTTCGACACTATTACATCAACTGATTTTGAGAGGGAATGGGTTGAGATGGTCAATCAGTATAACCTTCATGATAATCATTGGCTTACAACCTTATTTGAAGAGAGGGCAAAATGGGTACCAGCATATGTCAAGGATACTTTCTGGGCTGGTATATCCACTGTTCGCCGCAGTGAGCGGTTGGAGGCC TTTTTTGATGGATACATTACACCAGAGACCACAATTAAGACATTTATTGAACAATTTGATACTGCTATGAAGCTTAGGTCTGACCGAGAAGCGTATGATGATTTTCGCTCATTTCAGCAAAGGCCTCAAGTCTTGTCTGGTCTACTCTTTGAGGAGCAATTTGCAAATGTTTATACAATGAATATGTTTCAGAAGTTCCAAGATCACTTGAAGCAGCTGATGAACGTGACTTGCACTGAAGTCAGTAGGAATGGATCAATAGTGACTTACACTGTGACCGTCATTGGTAAGGAGAGGAAGTATGACTACAAAGTGATGTATAACAGTGCTGAGAAAGAGGTGTGGTGTATCTGCAGGTCCTTCCAG TTTAAAGGTATTTTGTGTAGCCATGCTCTTGCTGTCTTGAGACAGGAACTTGTGATGCTGATACCTTATAAATATATTCTCGATCGCTGGAGGAAGGACTACAAATGCCCCGAGGAATCCAAGGAAACTCCCATCTCACCAAAAGCGATCAAAGCTACAGGGAAGGGCACAAAACCGGAAAATGCCCGTGAAGATAAAGTGGACAATCTGTACAAGCATGGTCACCAGTACTTTGCTGACATTGTGGAAATGGGAGCAACGGACCCTGATGCAATGGAGTATGTTTTGTCGGTCATGAAAGAAGCCAAAGAGAAGGTACGGAAGTTCGAGGAATCTCGAAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTACTGGTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGAGGATGGGGGCAATGGCATATCAGATTCGACACCTGCGACTACAACAGTGGCGACAGTCGCGGTGGCCACATCTACAACAATGCAGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGTTTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGATGTTCCTAATACTGATTATGCCTAACTCAAATTTAGTCCTACAAGCTGCACCAGGCCCTCCTGTCCATGTGTAAT AATGGTTTATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGAATTATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATATGGAAAGTAATGTATTATGTATGTAGTGCAGCTTAGGAATGTTAGTCTCTGTTTCTGCTCATGTGGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCCTTGCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGATGTAATCACACTGAACTTTATTGCCAACCACTAATGCTT ] [+] EMBL CB633838 [ ACTTTCCAGACAGCCGATTTGGCATATCGGTTCTACTTAGAATATGGCTACCGTGCAGGGTTCGGGGTCTCAAAGAGGACTTCCCATAGTGTTGATGGGGTGAAATACCGTGCAACATTTGTTTGTTACAAAGGCGGCATTGCTAGGATCAAGCCTGGTCTCAAAGCTCGAAGGAGGCTTGTTGCAAAGACTGGTTGCAAAGCAATGATGGTAGTCAAGTATAACACAACTGAAAACCAGTGGGAGGTAGTTTTTGTTGAGCTGGAGCATAACCATCCATGTAATCCTGAAATGGTTAGATTCATGATGTGCTTTAAAGATCTCCCTGACTGGCAGAGAGAGCACCGCCCATTCAATGCCAAGACTAGATTGAATCCAAAGATTCACTCTGGCAGAGGCAGGCCACCCAACCAAAACAAAGACTTCATGGTGAAAAAAACCTTCTCACAATCAAATTATTCCATTGAAGCAGCAGGCAAGGCTGGAAAGCTGAGATTTGCAGAGGGTGATGTTGAGGCACTCTTGGTCTTCTTTGATAAGATGCAAGCTCAAAATTCAAACTTTTTCTACAACTGGGACATGGATGATGAAGGTCGGCTCAAGAATGTTTGCTGGGTCGATGCTAGATCGAGAGCTGCATACCAGCACTTCTGTGATGTTGTTTGCTTTGATACTGTTTATTTGACATACCAATTTGTCATTCCATTGGTTGCTTTTCTTGGAATCAACCATCATGGGCAATTTGTGTTGTTGGGATGCGGTTTACTTGGGGACGAATCTCCAGAGACTTTTTCTTGGTTATTCAAGAAATGG ] [+] EMBL CB655801 [ TTACAACCTTATTTGAAGAGAGGGCAAAATGGGTACCAGCATATGTCAAGGATACTTTCTGGGCTGGTATATCCACTGTTCGCCGCAGTGAGCGGTTGGAGGCCTTTTTTTGATGGATACATTACACCAGAGACCACAATTAAGACATTTATTGAACAATTTGATACTGCTATGAAGCTTAGGTCTGACCGAGAAGCGTATGATGATTTTCGCTCATTTCAGCAAAGGCCTCAAGTCTTGTCTGGTCTACTCTTTGAGGAGCAATTTGCAAATGTTTATACAATAAATATGTTTCAGAAGTTCCAAGATCACTTGAAGCAGCTGATGAACGTGACTTGCACTGAAGTCAGTAGGAATGGATCAATAGTGACTTACACTGTGACCGTCATTGGTAAGGAGAGGAAGTATGACTACAAAGTGATGTATAACAGTGCTGAGAAAGAGGTGTGGTGTATCTGCAGGTCCTTCCAG TTTAAAGGTATTTTGTGTAGCCATGCTCTTGCTGTCTTGAGACAGGAACTTGTGATGCTGATACCTTATAAATATATTCTCGATCGCTGGAGGAAGGACTACAAATGCCCCGAGGAATCCAAGGAAACTCCCATCTCACCAAAAGCGATCAAAGCTACAGGGAAGGGCACAAAACCGGAAAATGCCCGTGAAGATAAAGTGGACAATCTGTACAAGCATGGTCACCAGTACTTTGCTGACATTGTGGAAATGGGAGCAACGGACCCTGATGCAATGGAGTATGTTTT ] [+] EMBL AU166651 [ GAGCGGTTGGAGGCC TTTTTTGATGGATACATTACACCAGAGACCACAATTAAGACATTTATTGAACAATTTGATACTGCTATGAAGCTTAGGTCTGACCGAGAAGCGTATGATGATTTTCGCTCATTTCAGCAAAGGCCTCAAGTCTTGTCTGGTCTACTCTTTGAGGAGCAATTTGCAAATGTTTATACAATAAATATGTTTCAGAAGTTCCAAGATCACTTGAAGCAGCTGATGAACGTGACTTGCACTGAAGTCAGTAGGAATGGATCAATAGTGACTTACACTGTGACCGTCATTGGTAAGGAGAGGAAGTATGACTACAAAGTGATGTATAACAGTGCTGAGAAAGAGGTGTGGTGTATCTGCAGGTCCTTCCAGTTTTAAAGGTA ] [-] EMBL CB649425 [ ACCGGAAAATGCCCGTGAAGATAAAGTGGACAATCTGTACAAGCATGGTCACCAGTACTTTGCTGACATTGTGGAAATGGGAGCAACGGACCCTGATGCAATGGAGTATGTTTTGTCGGTCATGAAAGAAGCCAAAGAGAAGGTACGGAAGTTCGAGGAATCTCGAAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTACTGGTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGAGGATGGGGGCAATGGCATATCAGATTCAACACCTGCGACTACAACAGTGGCGACAGTCGCGGTGGCCACATCTACAACAATGCAGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGTTTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGATGTTCCTAATACTGATTATGCCTAACTCAAATTTAGTCCTACAAGCTGCACCAGGCCCTCCTGTCCATGTGTAAT AATGGTTTATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGAATTATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATATGGAAAGTAATGTATTATGTATGTAGTG ] [-] EMBL CB655802 [ TTCTACTGGTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGAGGATGGGGGCAATGGCATATCAGATTCAACACCTGCGACTACAACAGTGGCGACAGTCGCGGTGGCCACATCTACAACAATGCAGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGTTTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGATGTTCCTAATACTGATTATGCCTAACTCAAATTTAGTCCTACAAGCTGCACCAGGCCCTCCTGTCCATGTGTAAT AATGGTTTATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGAATTATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATATGGAAAGTAATGTATTATGTATGTAGTGCAGCTTAGGAATGTTAGTCTCTGTTTCTGCTCATGTGGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCCTTGCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGATGTAATCACACTGAACTTTATTGCCAACCACTAATG ] [+] EMBL AU166650 [ ctgncCCATGTGTAATAAATGGTTNATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGAATTATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATATGGAAAGTAATGTATTATGTATGTAGTGCAGCTTAGGAATGTTAGTCTCTGTTTCTGCTCATGTGGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCCTTGCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGATGTAATCACACTGAACTTTATTGCCAACCACTAATGCTTAGTTTCATCTTATGCCGTTGGCTGTTGCACTGAGCCCTGAGCATTATTTTCATCGTATGCAAGCTCACCATTTCTTGTCATAAAAAAAAA] consensusID : consensus_12741#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 828 fasta sequence [AGTTCGAGGAATCTCGGAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTACTGGTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGATGATGGGGGCAATGGCATATCAGATTCAACACCTGCGACTACAACAGTGCCGACAGTCGCGGTGGCCACATCTACAACAATGCAGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGTTTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGATGTTCCTAATACTGATTATGCCTAACTCAAATTTAGTCCTACAAGCTGCACCAGGCCCTCCTGTCCATGTGTAATAATGGTTTATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGAATTATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATATGGAAAGTAATGTATTATGTATGTAGTGCAGCTTAGGAATGCTAGTCTCTGTTTCTGCTCATGT-GGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCCTTGCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGATGTAATCACACTGGACTTTATGGCCAACCACTAATGCTTAGTTTCAAAAAAAAAGA] [-] EMBL CB633839 [AGTTCGAGGAATCTCGGAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTACTGGTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGATGATGGGGGCAATGGCATATCAGATTCAACACCTGCGACTACAACAGTGCCGACAGTCGCGGTGGCCACATCTACAACAATGCAGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGTTTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGATGTTCCTAATACTGATTATGCCTAACTCAAATTTAGTCCTACAAGCTGCACCAGGCCCTCCTGTCCATGTGTAATAATGGTTTATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGAATTATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATATGGAAAGTAATGTATTATGTATGTAGTGCAGCTTAGGAATGCTAGTCTCTGTTTCTGCTCATGT GGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCCTTGCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGATGTAATCACACTGGACTTTATGGCCAACCACTAATGCTTAGTTTCAAAAAAAAAGA] [+] EMBL BQ906091 [ ccgGTGCAGCTTAGGAATGCTAGTCTCTGTTTCTGCTCATGTCGGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCCTTGCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGATGTAATCACACTGAACTTTATGGCCCCCCCCTAATGCTTAGTTTAAAAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12741#0 GCCCGATCCACTGCTCTCCCCACCGGTGGTGAGTCACCACGCTGCGTGGCAAACCCTAGT 60 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TAACCGGCGCGGCGTCCGGCGACCGTACACTCGGCGGAGGCCGCAGAGCGGCAGCGGCAG 120 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 GCGGCGGTGCCGCCGAGGGCAGTCGGCTCGGCTCCCGCGGCAAAGCGGGAACGGGAGAGA 180 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 GAGCAGGGCGGCACACGCGCGCGCTGAGGCTGCGCGCGGTGGGCGCGGCGTCCGGCGATG 240 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 CCCGGGCAAGAGCTATAGGAAGGCGAAGTCGTGGGCTACAGCCCCAGTCCCCAGTGCTAA 300 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 GGCAGTTTCTGATTACCCAAGTGTAGATGTGATGGACACCCATCACAGCGATCAATATGC 360 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 AAAGAGCAGCCTGCAGCTGCAATTCAGGGACACCTCTGTTTCCTTTGAAAACAACAATTC 420 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TGTTTTGGATAAGCATGATATTACAAGCCCTCAAGTTGGCATGACTTTTGAGACAGCCGA 480 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TTTGGCATATCGGTTCTACTTAGAATATGGCTACCGTGCAGGGTTCGGGGTCTCAAAGAG 540 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 GACTTCCCATAGTGTTGATGGGGTGAAATACCGTGCAACATTTGTTTGTTACAAAGGCGG 600 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 CATTGCTAGGATCAAGCCTGGTCTCAAAGCTCGAAGGAGGCTTGTTGCAAAGACTGGTTG 660 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 CAAAGCAATGATGGTAGTCAAGTATAACACAACTGAAAACCAGTGGGAGGTAGTTTTTGT 720 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TGAGCTGGAGCATAACCATCCATGTAATCCTGAAATGGTTAGATTCATGATGTGCTTTAA 780 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 AGATCTCCCTGACTGGCAGAGGGAGCACCGCCCATTCAATGCCAAGACTAGATTGAATCC 840 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 AAAGATTCACTCTGGCAGAGGCAGGCCACCCAACCAAAACAAAGACTTCATGGTGAAAAA 900 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 AACCTTCTCACAATCAAATTATTCCATTGAAGCAGCAGGCAAGGCTGGAAAGCTGAGATT 960 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TGCAGAGGGTGATGTTGAGGCACTCTTGGTCTTCTTTGATAAGATGCAAGCTCAAAATTC 1020 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 AAACTTTTTCTACAACTGGGACATGGATGATGAAGGTCGGCTCAAGAATGTTTGCTGGGT 1080 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 CGATGCTAGATCGAGAGCTGCATACCAGCACTTCTGTGATGTTGTTTGCTTTGATACTGT 1140 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TTATTTGACATACCAATTTGTCATTCCATTGGTTGCTTTTCTTGGAATCAACCATCATGG 1200 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 GCAATTTGTGTTGTTGGGATGCGGTTTACTTGGGGACGAATCTCCAGAGACTTTTTCTTG 1260 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 GTTATTCAAGAAATGGCTAAAATGTATGAATGATAAATCACCTGAAGCAATTATTACCAC 1320 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 CCACTCAAGACCAGTGGTCAAAGCTGTTGCTGAGGTATTTCCAAATACTCGTCACAGATA 1380 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 CAATCTTTGGCATATCATGAAAGAGCTTCCTGAAATGTCTGGAAGAGTTGAGGATAAGGA 1440 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 GGCAATTAGCCTAAGAATGAAAAAGGTAGTCTTCGACACTATTACATCAACTGATTTTGA 1500 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 GAGGGAATGGGTTGAGATGGTCAATCAGTATAACCTTCATGATAATCATTGGCTTACAAC 1560 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 CTTATTTGAAGAGAGGGCAAAATGGGTACCAGCATATGTCAAGGATACTTTCTGGGCTGG 1620 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TATATCCACTGTTCGCCGCAGTGAGCGGTTGGAGGCCTTTTTTTGATGGATACATTACAC 1680 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 CAGAGACCACAATTAAGACATTTATTGAACAATTTGATACTGCTATGAAGCTTAGGTCTG 1740 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 ACCGAGAAGCGTATGATGATTTTCGCTCATTTCAGCAAAGGCCTCAAGTCTTGTCTGGTC 1800 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TACTCTTTGAGGAGCAATTTGCAAATGTTTATACAATAAATATGTTTCAGAAGTTCCAAG 1860 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 ATCACTTGAAGCAGCTGATGAACGTGACTTGCACTGAAGTCAGTAGGAATGGATCAATAG 1920 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TGACTTACACTGTGACCGTCATTGGTAAGGAGAGGAAGTATGACTACAAAGTGATGTATA 1980 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 ACAGTGCTGAGAAAGAGGTGTGGTGTATCTGCAGGTCCTTCCAGTTTAAAGGTATTTTGT 2040 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 GTAGCCATGCTCTTGCTGTCTTGAGACAGGAACTTGTGATGCTGATACCTTATAAATATA 2100 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TTCTCGATCGCTGGAGGAAGGACTACAAATGCCCCGAGGAATCCAAGGAAACTCCCATCT 2160 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 CACCAAAAGCGATCAAAGCTACAGGGAAGGGCACAAAACCGGAAAATGCCCGTGAAGATA 2220 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 AAGTGGACAATCTGTACAAGCATGGTCACCAGTACTTTGCTGACATTGTGGAAATGGGAG 2280 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 CAACGGACCCTGATGCAATGGAGTATGTTTTGTCGGTCATGAAAGAAGCCAAAGAGAAGG 2340 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 TACGGAAGTTCGAGGAATCTCGAAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTACTG 2400 consensus_12741#1 ------AGTTCGAGGAATCTCGGAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTACTG 54 **************** ************************************* consensus_12741#0 GTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGAGGATGGGGGCAATGGCATATCAG 2460 consensus_12741#1 GTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGATGATGGGGGCAATGGCATATCAG 114 ************************************* ********************** consensus_12741#0 ATTCAACACCTGCGACTACAACAGTGGCGACAGTCGCGGTGGCCACATCTACAACAATGC 2520 consensus_12741#1 ATTCAACACCTGCGACTACAACAGTGCCGACAGTCGCGGTGGCCACATCTACAACAATGC 174 ************************** ********************************* consensus_12741#0 AGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGT 2580 consensus_12741#1 AGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGT 234 ************************************************************ consensus_12741#0 TTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCAC 2640 consensus_12741#1 TTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCAC 294 ************************************************************ consensus_12741#0 CAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTT 2700 consensus_12741#1 CAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTT 354 ************************************************************ consensus_12741#0 CCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGATGTTCCTAATACTGAT 2760 consensus_12741#1 CCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGATGTTCCTAATACTGAT 414 ************************************************************ consensus_12741#0 TATGCCTAACTCAAATTTAGTCCTACAAGCTGCACCAGGCCCTCCTGTCCATGTGTAATA 2820 consensus_12741#1 TATGCCTAACTCAAATTTAGTCCTACAAGCTGCACCAGGCCCTCCTGTCCATGTGTAATA 474 ************************************************************ consensus_12741#0 ATGGTTTATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGAAT 2880 consensus_12741#1 ATGGTTTATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGAAT 534 ************************************************************ consensus_12741#0 TATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATATG 2940 consensus_12741#1 TATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATATG 594 ************************************************************ consensus_12741#0 GAAAGTAATGTATTATGTATGTAGTGCAGCTTAGGAATGTTAGTCTCTGTTTCTGCTCAT 3000 consensus_12741#1 GAAAGTAATGTATTATGTATGTAGTGCAGCTTAGGAATGCTAGTCTCTGTTTCTGCTCAT 654 *************************************** ******************** consensus_12741#0 GTGGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCCTT 3060 consensus_12741#1 GTGGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCCTT 714 ************************************************************ consensus_12741#0 GCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGATG 3120 consensus_12741#1 GCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGATG 774 ************************************************************ consensus_12741#0 TAATCACACTGAACTTTATTGCCAACCACTAATGCTTAGTTTCATCTTATGCCGTTGGCT 3180 consensus_12741#1 TAATCACACTGGACTTTATGGCCAACCACTAATGCTTAGTTTCAAAAAAAAAGA------ 828 *********** ******* ************************ * consensus_12741#0 GTTGCACTGAGCCCTGAGCATTATTTTCATCGTATGCAAGCTCACCATTTCTTGTCATAA 3240 consensus_12741#1 ------------------------------------------------------------ consensus_12741#0 AAAAAAA 3247 consensus_12741#1 ------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||