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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12751#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1313 fasta sequence
[TCCGCGGTGCTTTTCCCCAGCCATCACGAGACCTCCCCCAAAA--AAACCAAGCAAACGCCACAGCCACTCCACCAGACCACCACCACCACCACCACCCCACCCAGCTGGTGCGCCTCCAAGAATTCCTCCTCCTCTTCCTCGGATTCCTTCCCCCTCTTCGGCGGCGGGCTCCCCCACCGGCACCGGCGTCCCCGCTCCCGGCGTCGCCATTGGCCTCCTCCCTCGTCTCTGCTCGACGGAATATGAAGTTAAGGCCAAAAAGACCTGGATGGAAGTCACTTATGCCTCTGCAGTTGAGCAGGAAATCTGCACTGCGTTTCTTTTTGTTTCCCAAGGTTCAGGCTGCGGGTCAATCTCCAGATGACACACCAGTTTATCTTAATGTGTATGATTTAACACCCATGAATGGCTATGTATATTGGGCAGGCCTTGGTATATTTCACTCCGGAATTGAAGTTCATGGT-GTTGAATATGCATTTGGAGCACATGACTACCCCTCAAGTGGAGTATTTGAAGTAGAGCCTCGTCAATGCCCTGGTTTCAGATTCAGGAAATCGATATTTCTCGGTACAACATGCTTAGATCCCATTCAAGTTAGGCAATTCATGGAGCTACAGTCAGTGA-ACTACAA-TGGA-GATACTTACCACCTTAT-CACAAAGAACTGCAACCAC-TTTTGC-AAG-GACATGTGTTACAAATT-GACTGGTAACAAAATTCCAAAATGGGTAAATCGCCTCGCCAGAATAGGTGCCATTTGCAACTGCCTTCTGCCAGAATCACTCAAGATATCCCCAGTCGGCCATGATCCAAACAGTCGACCTGAAGATTGTGAGAAAAGGCGGCTGAGGAACCCGTTGAGCTGCTTCTCTTCGATCTCGAGCCAGAGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTACAGTTCATCAAGGAAATCCAGCGCTCCATCACTGAGGAATAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGGAGAGGTGTCTCTGTGTGGGTGAGAGTGAATGCCTCTCAATTCTACCCACC-CCCTGTACTGATCATGAGACACGAACCGGGATGTATTTTGTATATTATTAATCCACTATTCTTTCAGCTGTTGTAGCTGCCTGACCTAAAAAA]
[+] EMBL AK071509 [TCCGCGGTGCTTTTCCCCAGCCATCACGAGACCTCCCCCAAAA AAACCAAGCAAACGCCACAGCCACTCCACCAGACCACCACCACCACCACCACCCCACCCAGCTGGTGCGCCTCCAAGAATTCCTCCTCCTCTTCCTCGGATTCCTTCCCCCTCTTCGGCGGCGGGCTCCCCCACCGGCACCGGCGTCCCCGCTCCCGGCGTCGCCATTGGCCTCCTCCCTCGTCTCTGCTCGACGGAATATGAAGTTAAGGCCAAAAAGACCTGGATGGAAGTCACTTATGCCTCTGCAGTTGAGCAGGAAATCTGCACTGCGTTTCTTTTTGTTTCCCAAGGTTCAGGCTGCGGGTCAATCTCCAGATGACACACCAGTTTATCTTAATGTGTATGATTTAACACCCATGAATGGCTATGTATATTGGGCAGGCCTTGGTATATTTCACTCCGGAATTGAAGTTCATGGT GTTGAATATGCATTTGGAGCACATGACTACCCCTCAAGTGGAGTATTTGAAGTAGAGCCTCGTCAATGCCCTGGTTTCAGATTCAGGAAATCGATATTTCTCGGTACAACATGCTTAGATCCCATTCAAGTTAGGCAATTCATGGAGCTACAGTCAGTGA ACTACAA TGGA GATACTTACCACCTTAT CACAAAGAACTGCAACCAC TTTTGC AAG GACATGTGTTACAAATT GACTGGTAACAAAATTCCAAAATGGGTAAATCGCCTCGCCAGAATAGGTGCCATTTGCAACTGCCTTCTGCCAGAATCACTCAAGATATCCCCAGTCGGCCATGATCCAAACAGTCGACCTGAAGATTGTGAGAAAAGGCGGCTGAGGAACCCGTTGAGCTGCTTCTCTTCGATCTCGAGCCAGAGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTACAGTTCATCAAGGAAATCCAGCGCTCCATCACTGAAGAGTAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGGAGAGGTGTCTCTGTGTGGGTGAGAGTGAATGCCTCTCAATTCTACCCACC CCCTGTACTGATCATGAGACACGAACCGGGATGTATTTTGTATATTATTAATCCA ]
[+] EMBL CF310798 [ gagtagaAAAATTAAACC AGCAAACGCCACAGCCACTCCACCAGACCACCACCACCACCACCACCCCACCCAGCTGGTGCGCCTCCAAGAATTCCTCCTCCTCTTCCTCGGATTCCTTCCCCCTCTTCGGCGGCGGGCTCCCCCACCGGCACCGGCGTCCCCGCTCCCGGCGTCGCCATTGGCCTCCTCCCTCGTCTCTGCTCGACGGAATATGAAGTTAAGGCCAAAAAGACCTGGATGGAAGTCACTTATGCCTCTGCAGTTGAGCAGGAAATCTGCACTGCGTTTCTTTTTGTTTCCCAAGGTTCAGGCTGCGGGTCAATCTCCAGATGACACACCAGTTTATCTTAATGTGTATGATTTAACACCCATGAATGGCTATGTATATTGGGCAGGCCTTGGTATATTTCACTCCGGAATTGAAGTTCATGGT GTTGAATATGCATTTGGAGCACATGACTACCCCTCAAGTGGAGTATTTGAAGTAGAGCCTCGTCAATGCCCTGGTTTCAGATTCAGGAAATCGATATTTCTCGGTACAACATGCTTAGATCCCATTCAAGTTAGGCAATTCATGGAGCTACAGTCAGTGA ACTACAA TGGA GATACTTACCACCTTAT CACAAAGAACTGCAACCAC TTTTGC AAG GA ]
[+] EMBL AK104430 [ AAGCAAACGCCACAGCCACTCCACCAGACCACCACCACCACCACCACCCCACCCAGCTGGTGCGCCTCCAAGAATTCCTCCTCCTCTTCCTCGGATTCCTTCCCCCTCTTCGGCGGCGGGCTCCCCCACCGGCACCGGCGTCCCCGCTCCCGGCGTCGCCATTGGCCTCCTCCCTCGTCTCTGCTCGACGGAATATGAAGTTAAGGCCAAAAAGACCTGGATGGAAGTCACTTATGCCTCTGCAGTTGAGCAGGAAATCTGCACTGCGTTTCTTTTTGTTTCCCAAGGTTCAGGCTGCGGGTCAATCTCCAGATGACACACCAGTTTATCTTAATGTGTATGATTTAACACCCATGAATGGCTATGTATATTGGGCAGGCCTTGGTATATTTCACTCCGGAATTGAAGTTCATGGT GTTGAATATGCATTTGGAGCACATGACTACCCCTCAAGTGGAGTATTTGAAGTAGAGCCTCGTCAATGCCCTGGTTTCAGATTCAGGAAATCGATATTTCTCGGTACAACATGCTTAGATCCCATTCAAGTTAGGCAATTCATGGAGCTACAGTCAGTGA ACTACAA TGGA GATACTTACCACCTTAT CACAAAGAACTGCAACCAC TTTTGC AAG GACATGTGTTACAAATT GACTGGTAACAAAATTCCAAAATGGGTAAATCGCCTCGCCAGAATAGGTGCCATTTGCAACTGCCTTCTGCCAGAATCACTCAAGATATCCCCAGTCGGCCATGATCCAAACAGTCGACCTGAAGATTGTGAGAAAAGGCGGCTGAGGAACCCGTTGAGCTGCTTCTCTTCGATCTCGAGCCAGAGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTACAGTTCATCAAGGAAATCCAGCGCTCCATCACTGAGGAATAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGGAGAGGTGTCTCTGTGTGGGTGAGAGTGAATGCCTCTCAATTCTACCCACC CCCTGTACTGATCATGAGACACGAACCGGGATGTATTTTGTATATTATTAATCCACTATTCTTTCAGCTGTTG ]
[+] EMBL C91787 [ ACCACCCCACCCAGCTGGTGCGCCTCCAAGAATTCCTCCTCCTCTTCCTCGGATTCCTTCCCCCTCTTCGGCGGCGGGCTCCCCCACCGGCACCGGCGTCCCCGCTCCCGGCGTCGCCATTNGCCTNCTCCCTCGTCTCTNCNCGACGGAATATGAAGTTAAGGCCAAAAAGACCTGGATGGAAGTNACTTATGCCTCTGCAGTTGAGCAGGAAATCTGCACTGCGTNTCTTTTTGTTTCCCAAGGTTCAGGCTGCGGGTCAATCTCCAGATGACACANCAGTTTATCTTAATGTGTATGAATTAACANCCATGAATGGCTANGTATATTGGGGAAGGCTTGGTATATTTCACTCCGGAATTGAAGTTCATGGTGGTTGAATATGCTTTTGGAGC CATGAATTCCCCNCAAGTGGAGT TTTTAAGT GAACCTTGGNAATTCC ]
[+] EMBL AK060325 [ TCCTCCTCTTCCTCGGATTCCTTCCCCCTCTTCGGCGGCGGGCTCCCCCACCGGCACCGGCGTCCCCGCTCCCGGCGTCGCCATTGGCCTCCTCCCTCGTCTCTGCTCGACGGAATATGAAGTTAAGGCCAAAAAGACCTGGATGGAAGTCACTTATGCCTCTGCAGTTGAGCAGGAAATCTGCACTGCGTTTCTTTTTGTTTCCCAAGGTTCAGGCTGCGGGTCAATCTCCAGATGACACACCAGTTTATCTTAATGTGTATGATTTAACACCCATGAATGGCTATGTATATTGGGCAGGCCTTGGTATATTTCACTCCGGAATTGAAGTTCATGGT GTTGAATATGCATTTGGAGCACATGACTACCCCTCAAGTGGAGTATTTGAAGTAGAGCCTCGTCAATGCCCTGGTTTCAGATTCAGGAAATCGATATTTCTCGGTACAACATGCTTAGATCCCATTCAAGTTAGGCAATTCATGGAGCTACAGTCAGTGA ACTACAA TGGA GATACTTACCACCTTAT CACAAAGAACTGCAACCAC TTTTGC AAG GACATGTGTTACAAATT GACTGGTAACAAAATTCCAAAATGGGTAAATCGCCTCGCCAGAATAGGTGCCATTTGCAACTGCCTTCTGCCAGAATCACTCAAGATATCCCCAGTCGGCCATGATCCAAACAGTCGACCTGAAGATTGTGAGAAAAGGCGGCTGAGGAACCCGTTGAGCTGCTTCTCTTCGATCTCGAGCCAGAGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTACAGTTCATCAAGGAAATCCAGCGCTCCATCACTGAGGAATAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGGAGAGGTGTCTCTGTGTGGGTGAGAGTGAATGCCTCTCAATTCTACCCACC CCCTGTACTGATCATGAGACACGAACCGGGATGTATTTTGTATA ]
[-] EMBL CA763299 [ gctagcgccCAGTCAAGGAGACTCCAAGTGGAGGATTCGT CCCCCCTATGCACAGA AAAGGGGGGGACGTTTTGCGAAGCGCCAGGGGGGCCAAATTGGCCTGGTACCAAAATTCCAAAATGGGTAAGTCTCCTCCCCAGAATAGGTACCATTTGCAACTGCCTTGTGCCAGAATCACTCAAGATATCCCCAGTCGGCCATGATCCAAACAGTCGACCTGAAGATTTCGAGAAAAGGCGGCTGAGGAACCCGTTGAACTGCTTCTCTTCGATCTCGAGCCAGAGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTACAGTTCATCAAGGAAATCCAGCGCTCCATCACTGAGGAATAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGGAGAGGTGTCTCTGTGTGGGTGAGAGTGAATGCCTCTCAATTCTACCCACC CCCTGTACTGATCATGAGACACGAACCGGGATGTATTTTGTATATTATTAATCCACTATTCTTTCAaaaaaaaa ]
[-] EMBL CF310797 [ ccaAAAATGGGTAAATCGCCTCGCCAGAATAGGTGCCATTTGCAACTGCCTTCTGCCAGAATCACTCAAGATATCCCCAGTCGGCCATGATCCAAACAGTCGACCTGAAGATTGCGAGAAAAGGCGGCTGAGGAACCCGTTGAGCTGCTTCTCTTCGATCTCGAGCCAGAGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTACAGTTCATCAAGGAAATCCAGCGCTCCATCACTGAGGAATAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGGAGAGGTGTCTCTGTGTGGGTGGGAGTGAATGCCTCTCAATTCTACCCACCNCCCTGTACTGATCATGAGACACGAACCGGGATGTATTTTGTATATTATTAATCCACTATTCTTTCAGCTGTTGTAGCTGCCTGACCTAAAAAA]
[+] EMBL AU166109 [ ACAGTCGACCTGAAGATTGTGAGAAAAGNCGGCTGAGGAACCCGTTGAGCTGCTTCTCTTCGATCTCGAGCCAGAGGCAGCTGCCCCNATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTACAGTTCATCAAGGAAATCCAGCGNTCCATCACTGAGGAATAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCNCCTGGAGAGGTGTCTCTGTGTGGGTGAGAGTGAATGCCTCTCAATTCTACCCACC CCCTGTACTGATCATGAGACACGAACCGGGATGTATTTTGTATATTATTAATCCACTATTCTTTCAGCTGTTGTAaaaaaaaa ]
consensusID : consensus_12751#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 830 fasta sequence
[ACCACCACCACCACCACCCCACCCAGCTGGTGCGCCTCCAAGAATTCCTCCTCCTCTTCCTCGGATTCCTTCCCTCTCTTCGGCGGCGGGCTCCCCCACCGGCACCGGCGTCCCCGCTCCCGGCGTCGCCATTGGCCTCCTCCCTCGTCTCTGCTCGACGGAATATGAAGTTAAGGCCAAAAAGACCTGGATGGAAGTCACTTATGCCTCTGCAGTTGAGCAGGAAATCTGCACTGCGTTTCTTTTTGTTTCCCAAGGTTCAGGCTGCGGGTCAATCTCCAGATGACACACCAGTTTATCTTAATGTGTATGATTTAACACCCATGAATGGCTATGTATATTGGGCAGGCCTTGGTATATTTCACTCCGGAATTGAAGTTCATGGTGTTGAATATGCATTTGGAGCACATGACTACCCCTCAAGTGGAGTATTTGAAGTAGAGCCTCGTCAATGCCCTGGTTTCAGATTCAGGAAATCGATATTTCTCGGTACAACATGCTTAGATCCCATTCAAGTTAGGCAATTCATGGAGCTACAGTCAGTGAACTACAATGGAGATACTTACCACCTTATCACAAAGAACTGCAACCACTTTTGCAAGGACATGTGTTACAAATTGACTGGTAACAAAATTCCAAAATGGGTAAATCGCCTCGCCAGAATAGGTACCATACCTTTATTCAACCACTAATGCTTATATTAGCTGTTCAAGGTCTCCTACAAAGTCAAGGAAATTATGAAACCAATGACTGCATCTGAATGTGCTTAGTCAGAATGCATTGAGCAGTCTGACAGTTACCGCCATCATATTTTGCCCACAAAATATCGG]
[+] EMBL CB644254 [ACCACCACCACCACCACCCCACCCAGCTGGTGCGCCTCCAAGAATTCCTCCTCCTCTTCCTCGGATTCCTTCCCTCTCTTCGGCGGCGGGCTCCCCCACCGGCACCGGCGTCCCCGCTCCCGGCGTCGCCATTGGCCTCCTCCCTCGTCTCTGCTCGACGGAATATGAAGTTAAGGCCAAAAAGACCTGGATGGAAGTCACTTATGCCTCTGCAGTTGAGCAGGAAATCTGCACTGCGTTTCTTTTTGTTTCCCAAGGTTCAGGCTGCGGGTCAATCTCCAGATGACACACCAGTTTATCTTAATGTGTATGATTTAACACCCATGAATGGCTATGTATATTGGGCAGGCCTTGGTATATTTCACTCCGGAATTGAAGTTCATGGTGTTGAATATGCATTTGGAGCACATGACTACCCCTCAAGTGGAGTATTTGAAGTAGAGCCTCGTCAATGCCCTGGTTTCAGATTCAGGAAATCGATATTTCTCGGTACAACATGCTTAGATCCCATTCAAGTTAGGCAATTCATGGAGCTACAGTCAGTGAACTACAATGGAGATACTTACCACCTTATCACAAAGAACTGCAACCACTTTTGCAAGGACATGTGTTACAAATTGACTGGTAACAAAATTCCAAAATGGGTAAATCGCCTCGCCAGAATAGGTACCATACCTTTATTCAACCACTAATGCTTATATTAGCTGTTCAAGGTCTCCTACAAAGTCAAGGAAATTATGAAACCAATGACTGCATCTGAATGTGCTTAGTCAGAATGCATTGAGCAGTCTGACAGTTACCGCCATCATATTTTGCCCACAAAATATCGG]
consensusID : consensus_12751#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 798 fasta sequence
[TTTCAAAATAAAAAAGAAAGGAAAATGATGACTTGTTTGTATAGATGCACTCGGCACCACTTTGTGCCATCTTCTAAAAGATTTTGGATGTCCTTTTTTTTAAGAAACACAAGCACTGCAACATGCATAAAGCCAGTTTTTGCGTTAAGCAGCAGGACCAATCCAGCAGCTTCATCCATTAATTTAAGACATTGGCTTCTTGTCATAACGATTTGGAGCTTCCGCTGGTATTTGAGATTCTTATTATCAAGCTGGAACTCTGTGTCTTTTCTCTCTGTAGGTGCCATTTGCAACTGCCTTCTGCCAGAATCACTCAAGATATCCCCAGTCGGCCATGATCCAAACAGTCGACCTGAAGATTGTGAGAAAAGGCGGCTGAGGAACCCGTTGAGCTGCTTCTCTTCGATCTCGAGCCAGAGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTACAGTTCATCAAGGAAATCCAGCGCTCCATCACTGAGGAATAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGGAGAGGTGTCTCTGTGTGGGTGAGAGTGAATGCCTCTCAATTCTACCCACCCCCTGTACTGATCATGAGACACGAACCGGGATGTATGTTTGT]
[-] EMBL CB644255 [TTTCAAAATAAAAAAGAAAGGAAAATGATGACTTGTTTGTATAGATGCACTCGGCACCACTTTGTGCCATCTTCTAAAAGATTTTGGATGTCCTTTTTTTTAAGAAACACAAGCACTGCAACATGCATAAAGCCAGTTTTTGCGTTAAGCAGCAGGACCAATCCAGCAGCTTCATCCATTAATTTAAGACATTGGCTTCTTGTCATAACGATTTGGAGCTTCCGCTGGTATTTGAGATTCTTATTATCAAGCTGGAACTCTGTGTCTTTTCTCTCTGTAGGTGCCATTTGCAACTGCCTTCTGCCAGAATCACTCAAGATATCCCCAGTCGGCCATGATCCAAACAGTCGACCTGAAGATTGTGAGAAAAGGCGGCTGAGGAACCCGTTGAGCTGCTTCTCTTCGATCTCGAGCCAGAGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTACAGTTCATCAAGGAAATCCAGCGCTCCATCACTGAGGAATAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGGAGAGGTGTCTCTGTGTGGGTGAGAGTGAATGCCTCTCAATTCTACCCACCCCCTGTACTGATCATGAGACACGAACCGGGATGTATGTTTGT]
[-] EMBL CA882832 [ AAGGAAATCCAGCGCTCCATCACTGAGGAATAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGGAGAGGTGTCTCTGTGTGGGTGAGAGTGAATGCCTCTCAATTCTACCC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12751#0 TCCGCGGTGCTTTTCCCCAGCCATCACGAGACCTCCCCCAAAAAAACCAAGCAAACGCCA 60
consensus_12751#1 ------------------------------------------------------------
consensus_12751#2 ------------------------------------------------------------
consensus_12751#0 CAGCCACTCCACCAGACCACCACCACCACCACCACCCCACCCAGCTGGTGCGCCTCCAAG 120
consensus_12751#1 ------------------ACCACCACCACCACCACCCCACCCAGCTGGTGCGCCTCCAAG 42
consensus_12751#2 ---TTTCAAAATAAAAAAGAAAGGAAAATGATGACTTGTTTGTATAGATGCACTCGGCAC 57
* * * * ** * *** * *
consensus_12751#0 AATTCCTCCTCCTCTTCCTCG-GATTCC---TTCCCCCTCTTCGGCGGCGGGCTCCCCCA 176
consensus_12751#1 AATTCCTCCTCCTCTTCCTCG-GATTCC---TTCCCTCTCTTCGGCGGCGGGCTCCCCCA 98
consensus_12751#2 CACTTTGTGCCATCTTCTAAAAGATTTTGGATGTCCTTTTTTTTAAGAAACACAAGCACT 117
* * * ***** **** * ** * ** * * * *
consensus_12751#0 CCGGCACCGGCGTCCCCGCTCCCGGCGTC--GCCATTGGCCTCCTCCCTCGTCTCTGCTC 234
consensus_12751#1 CCGGCACCGGCGTCCCCGCTCCCGGCGTC--GCCATTGGCCTCCTCCCTCGTCTCTGCTC 156
consensus_12751#2 GCAACATGCATAAAGCCAGTTTTTGCGTTAAGCAGCAGGACCAATCCAGCAGCTTCATCC 177
* ** ** * **** ** ** * *** * ** *
consensus_12751#0 GACGGAATATGAAGTTAAG-----GCCAAAAAGACCTGGA-----TGGAAGTCACTTATG 284
consensus_12751#1 GACGGAATATGAAGTTAAG-----GCCAAAAAGACCTGGA-----TGGAAGTCACTTATG 206
consensus_12751#2 ATTAATTTAAGACATTGGCTTCTTGTCATAACGATTTGGAGCTTCCGCTGGTATTTGAGA 237
** ** ** * ** ** ** **** * ** * *
consensus_12751#0 CCTCTGCAGTTGAGCAGGAAATCTGCACTGCGTTTCTTTTTGTTTCCCAA--GGTTCAGG 342
consensus_12751#1 CCTCTGCAGTTGAGCAGGAAATCTGCACTGCGTTTCTTTTTGTTTCCCAA--GGTTCAGG 264
consensus_12751#2 TTCTTATTATCAAGCTGGAACTCTGTGTCTTTTCTCTCTGTAGGTGCCATTTGCAACTGC 297
* * *** **** **** * *** * * * *** * * *
consensus_12751#0 CTGCGGGTCAATCTCCAGATGACA-CACCAGTTTATCTTAATGTGTATGATTTAAC--AC 399
consensus_12751#1 CTGCGGGTCAATCTCCAGATGACA-CACCAGTTTATCTTAATGTGTATGATTTAAC--AC 321
consensus_12751#2 CTTCTGCCAGAATCACTCAAGATATCCCCAGTCGGCCATGATCCAAACAGTCGACCTGAA 357
** * * * * * ** * * ***** * * ** * * * * *
consensus_12751#0 CCATGAATGGCTATGTATATTGGGCAGGCCTTGGTATATTTCACTCCGGAATTGAAGTTC 459
consensus_12751#1 CCATGAATGGCTATGTATATTGGGCAGGCCTTGGTATATTTCACTCCGGAATTGAAGTTC 381
consensus_12751#2 GATTGTGAGAAAAGGCGGCTGAGGAACCCGTTGAGCTGCTTCTCTTCGATCTCGAGCCAG 417
** * * * * ** * * *** * *** ** ** * **
consensus_12751#0 ATGGTGTTGAATATGCATTTGGAGCACATGACTACCCCTCAAGTGGAGTATTTGAAGTAG 519
consensus_12751#1 ATGGTGTTGAATATGCATTTGGAGCACATGACTACCCCTCAAGTGGAGTATTTGAAGTAG 441
consensus_12751#2 AGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTAC 477
* * * ** ** * * *** * *** *** * * ***
consensus_12751#0 AGCCTCGTCAATG----CCCTGGTTTCAGATTCAGGAAATCGATATTTCTCGGTACAACA 575
consensus_12751#1 AGCCTCGTCAATG----CCCTGGTTTCAGATTCAGGAAATCGATATTTCTCGGTACAACA 497
consensus_12751#2 AGT-TCATCAAGGAAATCCAGCGCTCCATCACTGAGGAATAGGTAG--CCTGGCCTCCCT 534
** ** **** * ** * * ** * *** * ** * ** *
consensus_12751#0 TGCTTAGATCCCATT--CAAGTTAGGCAATTCATGGAGCTACAGTCAGTGAACTACAATG 633
consensus_12751#1 TGCTTAGATCCCATT--CAAGTTAGGCAATTCATGGAGCTACAGTCAGTGAACTACAATG 555
consensus_12751#2 TGTGTAACTTTTGATACCAAGTTAGGCTAATT-TGGT----CAGTGGCAACATCTGGAGG 589
** ** * * ********** * * *** **** * * *
consensus_12751#0 GAGATACTTACCACCTTATCACAAAGAACTGCAACCACTTTTGCAAGGACATGTGTTACA 693
consensus_12751#1 GAGATACTTACCACCTTATCACAAAGAACTGCAACCACTTTTGCAAGGACATGTGTTACA 615
consensus_12751#2 GCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGT--CA 647
* *** ** * * *** * ** * ***** * ** ** **
consensus_12751#0 AATTGACTGGTAACAAAATTCCAAAATGGGTAAATCGC-CTCGCCAGAATAGGTGCCATT 752
consensus_12751#1 AATTGACTGGTAACAAAATTCCAAAATGGGTAAATCGC-CTCGCCAGAATAGGTACCAT- 673
consensus_12751#2 AAATGCTTGGTGGTGTTGTTGTATCATG--TAAGTGGAACTAATGCGAGTGAGTCACCTG 705
** ** **** ** * *** *** * * ** ** * ** * *
consensus_12751#0 TGCAACTGCCTTCTGCCAGAATCACTCAAGATATCCCCAGTCGGCCATGATCCAAACAGT 812
consensus_12751#1 ---ACCTTTATTCAACCACTAATGCTTA---TATTAGCTGTTCAAGGTCTCCTACAAAGT 727
consensus_12751#2 GAGAGGTGTCTCTG-----TGTGGGTGAGAGTGAATGCCTCTCAA----TTCTACCCACC 756
* * * * * * * * * *
consensus_12751#0 CGACCTGAAGATTGTGAGA--AAAGGCGGCTGAGGAACCCGTTGAGCTGCTTCTCTTCGA 870
consensus_12751#1 CAA---GGAAATTATGAAACCAATGACTGCATCTGAATGTGCTTAGTCAGAATGCATTGA 784
consensus_12751#2 CCCTGTACTGATCATGAGACACGAACCGGGATGTATGTTTGT------------------ 798
* ** *** * * * *
consensus_12751#0 TCTCGAGCCAGAGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGC 930
consensus_12751#1 GC---AGTCTGA--CAGTTACCGCCATCATATTTTGCCCACAAAATATCGG--------- 830
consensus_12751#2 ------------------------------------------------------------
consensus_12751#0 CTCTTGCGTACAGTTCATCAAGGAAATCCAGCGCTCCATCACTGAGGAATAGGTAGCCTG 990
consensus_12751#1 ------------------------------------------------------------
consensus_12751#2 ------------------------------------------------------------
consensus_12751#0 GCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGGTCAGTGGCAACATCTGG 1050
consensus_12751#1 ------------------------------------------------------------
consensus_12751#2 ------------------------------------------------------------
consensus_12751#0 AGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTC 1110
consensus_12751#1 ------------------------------------------------------------
consensus_12751#2 ------------------------------------------------------------
consensus_12751#0 AAAATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGG 1170
consensus_12751#1 ------------------------------------------------------------
consensus_12751#2 ------------------------------------------------------------
consensus_12751#0 AGAGGTGTCTCTGTGTGGGTGAGAGTGAATGCCTCTCAATTCTACCCACCCCCTGTACTG 1230
consensus_12751#1 ------------------------------------------------------------
consensus_12751#2 ------------------------------------------------------------
consensus_12751#0 ATCATGAGACACGAACCGGGATGTATTTTGTATATTATTAATCCACTATTCTTTCAGCTG 1290
consensus_12751#1 ------------------------------------------------------------
consensus_12751#2 ------------------------------------------------------------
consensus_12751#0 TTGTAGCTGCCTGACCTAAAAAA 1313
consensus_12751#1 -----------------------
consensus_12751#2 -----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||