Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12757 cluster # 12757       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12757#0 length = 1244 sequences # 8  
consensus_12757#1 length = 676 sequences # 1  
consensus_12757#2 length = 599 sequences # 1  
consensus_12757#3 length = 239 sequences # 1  

consensusID : consensus_12757#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1244
fasta sequence
                              [CCTTCGGCTCCTCCCTTCTCACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCCATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCTCCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCAAGGAGCACTTCCTCGAGGTCTCCAAGATGACGCCCCCGCCCAAGATCAGCCCGCCCAAGCCCTACACGATCGTCAAGGGCGCCCTGGACCAGGCATCCGGCCCCGTGCTCCGCCGCGGGTACGGGGATGCCGGCGAGGAGATCTCAATCTCCGTCGCCAGGCTCGCCAACATCATGCCCCCCGGCGCCGACTACGACTCGGACGACGACGACGGCGGCGGGGGTGGGGTGAGCGAGTCGATTAGCCAGCTTTTCCTCCACGTCGACATCTCCAGGCCAGGGAGCAGCAAGTCGCTGCAGTTCCTGTGCGGGCTGTACCCCGACGCCGTGGGGATCCATTCCGTCTGCCTCCGGCCGAAGACTGCCGAGTCTGGGACGGCGGGTTTGGCTGGGAAGGGCGGTGACGGGTACCAGGGCCGTATCTTCCAAGAATTGGATGAGAATGTGCGTGATGCATTCCATCATTACATCGAGGCCCGTGGTATAAATGAGAAACTCTTCCCTTTCCTACAAGCTTGGCTGTATGTGAAGGATCACCGCAATCTCATACGCTGGTTCAAGAGTGTGGGTACACTGATCAGTGAGCCAAAGTCTGAGTAAGATGTTAATAACATCTTGCTGAAGATCACATCGGGGAGGCGATACTAGGAATGTTTCTTGCCTGTTTGAGAAAACCCAGAAGATTTGGAGCTATGCTACAATAAAGCAAATGCGGCACACGATATTGCATTAGTGGGGGTTTCTTCGTTCTGTTTAGTTTAACTAAGCCCCTGGGGAGTAGATCGTCACTGGAGGGCTTGATGTGTAGGATTACTAGCGTGAGTTTTCAGTATTCCTGTGATTGGATGCTCTACCATTAGTTGTGCATTACGATATAACCATGCACTTGAACAATTTATGCATCCTTCCTATAATCATGGCTATAGGGTTACAAAATTAGCCTGAAGGAGCCGGAAACTATTGGTAATTTTTGTAAGAGAGCACATCCCCAACTTTTATAGAAAGGCCATCATTAGATGATTACAACACAATCACTTGGGGAGTTGGGGGTATAGAGAACTGTACAAGATTACAGATGAATATGACTCC]

[+] EMBL AK106478             [CCTTCGGCTCCTCCCTTCTCACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCCATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCTCCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCAAGGAGCACTTCCTCGAGGTCTCCAAGATGACGCCCCCGCCCAAGATCAGCCCGCCCAAGCCCTACACGATCGTCAAGGGCGCCCTGGACCAGGCATCCGGCCCCGTGCTCCGCCGCGGGTACGGGGATGCCGGCGAGGAGATCTCAATCTCCGTCGCCAGGCTCGCCAACATCATGCCCCCCGGCGCCGACTACGACTCGGACGACGACGACGGCGGCGGGGGTGGGGTGAGCGAGTCGATTAGCCAGCTTTTCCTCCACGTCGACATCTCCAGGCCAGGGAGCAGCAAGTCGCTGCAGTTCCTGTGCGGGCTGTACCCCGACGCCGTGGGGATCCATTCCGTCTGCCTCCGGCCGAAGACTGCCGAGTCTGGGACGGCGGGTTTGGCTGGGAAGGGCGGTGACGGGTACCAGGGCCGTATCTTCCAAGAATTGGATGAGAATGTGCGTGATGCATTCCATCATTACATCGAGGCCCGTGGTATAAATGAGAAACTCTTCCCTTTCCTACAAGCTTGGCTGTATGTGAAGGATCACCGCAATCTCATACGCTGGTTCAAGAGTGTGGGTACACTGATCAGTGAGCCAAAGTCTGAGTAAGATGTTAATAACATCTTGCTGAAGATCACATCGGGGAGGCGATACTAGGAATGTTTCTTGCCTGTTTGAGAAAACCCAGAAGATTTGGAGCTATGCTACAATAAAGCAAATGCGGCACACGATATTGCATTAGTGGGGGTTTCTTCGTTCTGTTTAGTTTAACTAAGCCCCTGGGGAGTAGATCGTCACTGGAGGGCTTGATGTGTAGGATTACTAGCGTGAGTTTTCAGTATTCCTGTGATTGGATGCTCTACCATTAGTTGTGCATTACGATATAACCATGCACTTGAACAATTTATGCATCCTTCCTATAATCATGGCTATAGGGTTACAAAATTAGCCTGAAGGAGCCGGAAACTATTGGTAATTTTTGTAAGAGAGCACATCCCCAACTTTTATAGAAAGGCCATCATTAGATGATTACAACACAATCACTTGGGGAGTTGGGGGTATAGAGAACTGTACAAGATTACAGATGAATATGACTCC]
[+] EMBL CF338505             [    CGGCTCCTCCCTTCTCACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCCATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCTCCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF339080             [    CGGCTCCTCCCTTCTCACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCCATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCTCCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF340499             [    CGGCTCCTCCCTTCTCACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCCATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCTCCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF338640             [    CGGCTCCTCCCTTCT ACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCCATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCTCCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF338576             [    CGGCTCCTCCCTTCT ACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCCATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCTCCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF339668             [    CGGCTCCTCCCTTCT ACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCCATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCTCCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF338677             [    tcGCTCCTCCCTTCTCACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCCATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCTCCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]


>consensus_12757#0 CCTTCGGCTCCTCCCTTCTCACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCC ATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCT CCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCAAGGAGCACTTCCTCGAGGTCTCCA AGATGACGCCCCCGCCCAAGATCAGCCCGCCCAAGCCCTACACGATCGTCAAGGGCGCCC TGGACCAGGCATCCGGCCCCGTGCTCCGCCGCGGGTACGGGGATGCCGGCGAGGAGATCT CAATCTCCGTCGCCAGGCTCGCCAACATCATGCCCCCCGGCGCCGACTACGACTCGGACG ACGACGACGGCGGCGGGGGTGGGGTGAGCGAGTCGATTAGCCAGCTTTTCCTCCACGTCG ACATCTCCAGGCCAGGGAGCAGCAAGTCGCTGCAGTTCCTGTGCGGGCTGTACCCCGACG CCGTGGGGATCCATTCCGTCTGCCTCCGGCCGAAGACTGCCGAGTCTGGGACGGCGGGTT TGGCTGGGAAGGGCGGTGACGGGTACCAGGGCCGTATCTTCCAAGAATTGGATGAGAATG TGCGTGATGCATTCCATCATTACATCGAGGCCCGTGGTATAAATGAGAAACTCTTCCCTT TCCTACAAGCTTGGCTGTATGTGAAGGATCACCGCAATCTCATACGCTGGTTCAAGAGTG TGGGTACACTGATCAGTGAGCCAAAGTCTGAGTAAGATGTTAATAACATCTTGCTGAAGA TCACATCGGGGAGGCGATACTAGGAATGTTTCTTGCCTGTTTGAGAAAACCCAGAAGATT TGGAGCTATGCTACAATAAAGCAAATGCGGCACACGATATTGCATTAGTGGGGGTTTCTT CGTTCTGTTTAGTTTAACTAAGCCCCTGGGGAGTAGATCGTCACTGGAGGGCTTGATGTG TAGGATTACTAGCGTGAGTTTTCAGTATTCCTGTGATTGGATGCTCTACCATTAGTTGTG CATTACGATATAACCATGCACTTGAACAATTTATGCATCCTTCCTATAATCATGGCTATA GGGTTACAAAATTAGCCTGAAGGAGCCGGAAACTATTGGTAATTTTTGTAAGAGAGCACA TCCCCAACTTTTATAGAAAGGCCATCATTAGATGATTACAACACAATCACTTGGGGAGTT GGGGGTATAGAGAACTGTACAAGATTACAGATGAATATGACTCC



consensusID : consensus_12757#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 676
fasta sequence
                              [TGGCTGGAAAGGCGGGTACCGGGTACCAGGGCCGTATCTTCCCAAAAATGGGATGAGAATGTGGGTGATGCATTCCATCATTACATCGAGGCCTGTGGTATAAATGAGAAACTCTTCCCTTTCCTACAAGCTTGGCTGTATGTGAAGGATCCCCGCAATCTCATACGCTGGTTCAAGAGTGTGGGTCCACTGATCAGTGAGCCAAAGTCTGAGTAAGATGTTAATAACATCTTGCTGAAGATCCCATCGGGGAGGCGATACTAGGAATGTTTCTTGCCTGTTTGAGAAAACCCAGAAGATTTGGAGCTATGCTACAATAAAGCAAATGCGGCCCCCGATATTGCATTAGTGGGGGTTTCTTCGTTCTGTTTAGTTTAACTAAGCCCCTGGGGAGTAGATCGTCACTGGAGGGCTTGATGTGTAGGATTACTAGCGTGAGTTTTCAATATTCCTGTGATTGGATGCTCTACCATTAGTTGTGCATTACGGTATAACCATGCCCTTGAACAATTTATGCATGCTTCCTATAATCATGGCTATAGGGTTACAAAATTAGCCTGAAGGAGCCGGAAACTATTGGTAATTTTTGTAAAAGAGCCCATCCCCAACTTTTATAGAAAGGCCATCCTTAGATGATTCCACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760286             [TGGCTGGAAAGGCGGGTACCGGGTACCAGGGCCGTATCTTCCCAAAAATGGGATGAGAATGTGGGTGATGCATTCCATCATTACATCGAGGCCTGTGGTATAAATGAGAAACTCTTCCCTTTCCTACAAGCTTGGCTGTATGTGAAGGATCCCCGCAATCTCATACGCTGGTTCAAGAGTGTGGGTCCACTGATCAGTGAGCCAAAGTCTGAGTAAGATGTTAATAACATCTTGCTGAAGATCCCATCGGGGAGGCGATACTAGGAATGTTTCTTGCCTGTTTGAGAAAACCCAGAAGATTTGGAGCTATGCTACAATAAAGCAAATGCGGCCCCCGATATTGCATTAGTGGGGGTTTCTTCGTTCTGTTTAGTTTAACTAAGCCCCTGGGGAGTAGATCGTCACTGGAGGGCTTGATGTGTAGGATTACTAGCGTGAGTTTTCAATATTCCTGTGATTGGATGCTCTACCATTAGTTGTGCATTACGGTATAACCATGCCCTTGAACAATTTATGCATGCTTCCTATAATCATGGCTATAGGGTTACAAAATTAGCCTGAAGGAGCCGGAAACTATTGGTAATTTTTGTAAAAGAGCCCATCCCCAACTTTTATAGAAAGGCCATCCTTAGATGATTCCACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12757#1 TGGCTGGAAAGGCGGGTACCGGGTACCAGGGCCGTATCTTCCCAAAAATGGGATGAGAAT GTGGGTGATGCATTCCATCATTACATCGAGGCCTGTGGTATAAATGAGAAACTCTTCCCT TTCCTACAAGCTTGGCTGTATGTGAAGGATCCCCGCAATCTCATACGCTGGTTCAAGAGT GTGGGTCCACTGATCAGTGAGCCAAAGTCTGAGTAAGATGTTAATAACATCTTGCTGAAG ATCCCATCGGGGAGGCGATACTAGGAATGTTTCTTGCCTGTTTGAGAAAACCCAGAAGAT TTGGAGCTATGCTACAATAAAGCAAATGCGGCCCCCGATATTGCATTAGTGGGGGTTTCT TCGTTCTGTTTAGTTTAACTAAGCCCCTGGGGAGTAGATCGTCACTGGAGGGCTTGATGT GTAGGATTACTAGCGTGAGTTTTCAATATTCCTGTGATTGGATGCTCTACCATTAGTTGT GCATTACGGTATAACCATGCCCTTGAACAATTTATGCATGCTTCCTATAATCATGGCTAT AGGGTTACAAAATTAGCCTGAAGGAGCCGGAAACTATTGGTAATTTTTGTAAAAGAGCCC ATCCCCAACTTTTATAGAAAGGCCATCCTTAGATGATTCCACCCCAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAA



consensusID : consensus_12757#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence
                              [TCATCGGTGGTTCAAGAGGGGGGTCCTCTGTCGGTAGCCAAGTTTGGATTAGGATGTTAAAACTTTTTGGGGAGGATCACATGGGGGGGGCGATCCTAGGAATGTTTCTCCCCTGTTTGAGAAACCCCAGAAGATTGGGAGTTTTGCTCCAATAAAGCAAATGGGGCCCCGGATATGGCATTAGTGGGGGTTTTTTCGTTCTGTTTAGTTTAACTAACCCCCGGGGGAGTAGATCGTCCCGGGGGGGCTTGATGTGTAGGATTCCTAGCGGGAGTTTTCAATTTTCCTGGGATGGGATGCTTTCCCATTAGTTGTCCATTCCGATATACCCATCCCCTGGACCAATTTATGCATCCTTCCTATAATCAGGGCTATGGGGTTCCAAAATTAGCCTGAGGGAGCCGGAAATTATTGGTAATTTTTGTAAGAGAGCCCTTCCCCAATTTTTATAGAAAGGCCTTCTTTAGATGTTTCCACCCCATTCCCTGGGGGAGTGGGGGGTATAGAGACCTGTCCAAGATTCCAGAGGAATATGCCTCCTTTGGGTTCCTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT]

[-] EMBL CA756394             [TCATCGGTGGTTCAAGAGGGGGGTCCTCTGTCGGTAGCCAAGTTTGGATTAGGATGTTAAAACTTTTTGGGGAGGATCACATGGGGGGGGCGATCCTAGGAATGTTTCTCCCCTGTTTGAGAAACCCCAGAAGATTGGGAGTTTTGCTCCAATAAAGCAAATGGGGCCCCGGATATGGCATTAGTGGGGGTTTTTTCGTTCTGTTTAGTTTAACTAACCCCCGGGGGAGTAGATCGTCCCGGGGGGGCTTGATGTGTAGGATTCCTAGCGGGAGTTTTCAATTTTCCTGGGATGGGATGCTTTCCCATTAGTTGTCCATTCCGATATACCCATCCCCTGGACCAATTTATGCATCCTTCCTATAATCAGGGCTATGGGGTTCCAAAATTAGCCTGAGGGAGCCGGAAATTATTGGTAATTTTTGTAAGAGAGCCCTTCCCCAATTTTTATAGAAAGGCCTTCTTTAGATGTTTCCACCCCATTCCCTGGGGGAGTGGGGGGTATAGAGACCTGTCCAAGATTCCAGAGGAATATGCCTCCTTTGGGTTCCTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT]


>consensus_12757#2 TCATCGGTGGTTCAAGAGGGGGGTCCTCTGTCGGTAGCCAAGTTTGGATTAGGATGTTAA AACTTTTTGGGGAGGATCACATGGGGGGGGCGATCCTAGGAATGTTTCTCCCCTGTTTGA GAAACCCCAGAAGATTGGGAGTTTTGCTCCAATAAAGCAAATGGGGCCCCGGATATGGCA TTAGTGGGGGTTTTTTCGTTCTGTTTAGTTTAACTAACCCCCGGGGGAGTAGATCGTCCC GGGGGGGCTTGATGTGTAGGATTCCTAGCGGGAGTTTTCAATTTTCCTGGGATGGGATGC TTTCCCATTAGTTGTCCATTCCGATATACCCATCCCCTGGACCAATTTATGCATCCTTCC TATAATCAGGGCTATGGGGTTCCAAAATTAGCCTGAGGGAGCCGGAAATTATTGGTAATT TTTGTAAGAGAGCCCTTCCCCAATTTTTATAGAAAGGCCTTCTTTAGATGTTTCCACCCC ATTCCCTGGGGGAGTGGGGGGTATAGAGACCTGTCCAAGATTCCAGAGGAATATGCCTCC TTTGGGTTCCTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT



consensusID : consensus_12757#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 239
fasta sequence
                              [GAGGGCTTGATGTGTAGGATTACTAGCGTGAGTTTTCAATATTCCTGTGATTGGATGCTCTACCATTAGTTGTGCATTACGATATAACCATGCACTTGAACAATTTATGCATCCTTCCTATAATCGTGGCTATAGGGTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF329468             [GAGGGCTTGATGTGTAGGATTACTAGCGTGAGTTTTCAATATTCCTGTGATTGGATGCTCTACCATTAGTTGTGCATTACGATATAACCATGCACTTGAACAATTTATGCATCCTTCCTATAATCGTGGCTATAGGGTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12757#3 GAGGGCTTGATGTGTAGGATTACTAGCGTGAGTTTTCAATATTCCTGTGATTGGATGCTC TACCATTAGTTGTGCATTACGATATAACCATGCACTTGAACAATTTATGCATCCTTCCTA TAATCGTGGCTATAGGGTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12757#0      CCTTCGGCTCCTCCCTTCTCACGATGTTCCGCCGCGCCGCCGCGTCTACCTTCTTTCGCC 60
consensus_12757#1      ------------------------------------------------------------
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      ATGCCCTCTCCACCTCACCATACTCCTCCTCCGCCGCCGCCGCCGCCGCGGCCGCCTCCT 120
consensus_12757#1      ------------------------------------------------------------
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      CCTCCGCCGTGAACTCCATCATCCTCCGCTCCCTCAAGGAGCACTTCCTCGAGGTCTCCA 180
consensus_12757#1      ------------------------------------------------------------
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      AGATGACGCCCCCGCCCAAGATCAGCCCGCCCAAGCCCTACACGATCGTCAAGGGCGCCC 240
consensus_12757#1      ------------------------------------------------------------
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      TGGACCAGGCATCCGGCCCCGTGCTCCGCCGCGGGTACGGGGATGCCGGCGAGGAGATCT 300
consensus_12757#1      ------------------------------------------------------------
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      CAATCTCCGTCGCCAGGCTCGCCAACATCATGCCCCCCGGCGCCGACTACGACTCGGACG 360
consensus_12757#1      ------------------------------------------------------------
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      ACGACGACGGCGGCGGGGGTGGGGTGAGCGAGTCGATTAGCCAGCTTTTCCTCCACGTCG 420
consensus_12757#1      ------------------------------------------------------------
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      ACATCTCCAGGCCAGGGAGCAGCAAGTCGCTGCAGTTCCTGTGCGGGCTGTACCCCGACG 480
consensus_12757#1      ------------------------------------------------------------
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      CCGTGGGGATCCATTCCGTCTGCCTCCGGCCGAAGACTGCCGAGTCTGGGACGGCGGGTT 540
consensus_12757#1      ------------------------------------------------------------
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      TGGCTGGGAAGGGCGGTGACGGGTACCAGGGCCGTATCTTCC-AAGAATTGGATGAGAAT 599
consensus_12757#1      TGGCTGGAAAGGCGGGTACCGGGTACCAGGGCCGTATCTTCCCAAAAATGGGATGAGAAT 60
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      GTGCGTGATGCATTCCATCATTACATCGAGGCCCGTGGTATAAATGAGAAACTCTTCCCT 659
consensus_12757#1      GTGGGTGATGCATTCCATCATTACATCGAGGCCTGTGGTATAAATGAGAAACTCTTCCCT 120
consensus_12757#2      ------------------------------------------------------------
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      TTCCTACAAGCTTGGCTGTATGTGAAGGATCACCGCAATCTCATACGCTGGTTCAAGAGT 719
consensus_12757#1      TTCCTACAAGCTTGGCTGTATGTGAAGGATCCCCGCAATCTCATACGCTGGTTCAAGAGT 180
consensus_12757#2      ----------------------------------------TCAT-CGGTGGTTCAAGAG- 18
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      GTGGGTACACTGATCAGTGAGCCAAAGTCTGAGTAAGATGTTAATAACATCTTGCTGAAG 779
consensus_12757#1      GTGGGTCCACTGATCAGTGAGCCAAAGTCTGAGTAAGATGTTAATAACATCTTGCTGAAG 240
consensus_12757#2      GGGGGTCCTCTG-TCGGT-AGCCAAGTTTGGATTAGGATGTTAA-AACTTTTTGGGGAGG 75
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      ATCACATCGGGGAGGCGATACTAGGAATGTTTCTTGCCTGTTTGAGAAAACCCAGAAGAT 839
consensus_12757#1      ATCCCATCGGGGAGGCGATACTAGGAATGTTTCTTGCCTGTTTGAGAAAACCCAGAAGAT 300
consensus_12757#2      ATCACATGGGGGGGGCGATCCTAGGAATGTTTCTCCCCTGTTTGAGAAACCCCAGAAGAT 135
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      TTGGAGCTATGCTACAATAAAGCAAATGCGGCACACGATATTGCATTAGTGGGGGTTTCT 899
consensus_12757#1      TTGGAGCTATGCTACAATAAAGCAAATGCGGCCCCCGATATTGCATTAGTGGGGGTTTCT 360
consensus_12757#2      TGGGAGTTTTGCTCCAATAAAGCAAATGGGGCCCCGGATATGGCATTAGTGGGGGTTTTT 195
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      TCGTTCTGTTTAGTTTAACTAAGCCCCTGGGGAGTAGATCGTCACTGGAGGGCTTGATGT 959
consensus_12757#1      TCGTTCTGTTTAGTTTAACTAAGCCCCTGGGGAGTAGATCGTCACTGGAGGGCTTGATGT 420
consensus_12757#2      TCGTTCTGTTTAGTTTAACTAACCCCCGGGGGAGTAGATCGTCCCGGGGGGGCTTGATGT 255
consensus_12757#3      -----------------------------------------------GAGGGCTTGATGT 13
                                                                      * ***********

consensus_12757#0      GTAGGATTACTAGCGTGAGTTTTCAGTATTCCTGTGATTGGATGCTCTACCATTAGTTGT 1019
consensus_12757#1      GTAGGATTACTAGCGTGAGTTTTCAATATTCCTGTGATTGGATGCTCTACCATTAGTTGT 480
consensus_12757#2      GTAGGATTCCTAGCGGGAGTTTTCAATTTTCCTGGGATGGGATGCTTTCCCATTAGTTGT 315
consensus_12757#3      GTAGGATTACTAGCGTGAGTTTTCAATATTCCTGTGATTGGATGCTCTACCATTAGTTGT 73
                       ******** ****** ********* * ****** *** ******* * ***********

consensus_12757#0      GCATTACGATATAACCATGCACTTGAACAATTTATGCATCCTTCCTATAATCATGGCTAT 1079
consensus_12757#1      GCATTACGGTATAACCATGCCCTTGAACAATTTATGCATGCTTCCTATAATCATGGCTAT 540
consensus_12757#2      CCATTCCGATATACCCATCCCCTGGACCAATTTATGCATCCTTCCTATAATCAGGGCTAT 375
consensus_12757#3      GCATTACGATATAACCATGCACTTGAACAATTTATGCATCCTTCCTATAATCGTGGCTAT 133
                        **** ** **** **** * ** ** ************ ************  ******

consensus_12757#0      AGGGTTACAAAATTAGCCTGAAGGAGCCGGAAACTATTGGTAATTTTTGTAAGAGAGCAC 1139
consensus_12757#1      AGGGTTACAAAATTAGCCTGAAGGAGCCGGAAACTATTGGTAATTTTTGTAAAAGAGCCC 600
consensus_12757#2      GGGGTTCCAAAATTAGCCTGAGGGAGCCGGAAATTATTGGTAATTTTTGTAAGAGAGCCC 435
consensus_12757#3      AGGGTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 193
                        ***** *****  *     *   *     ***  *     **       ** * *    

consensus_12757#0      ATCCCCAACTTTTATAGAAAGGCCATCATTAGATGATTACAACACAATCACTTGGGGAGT 1199
consensus_12757#1      ATCCCCAACTTTTATAGAAAGGCCATCCTTAGATGATTCCACCCCAAAAAAAAAAAAAAA 660
consensus_12757#2      TTCCCCAATTTTTATAGAAAGGCCTTCTTTAGATGTTTCCACCCCATTCCCTGGGGGAGT 495
consensus_12757#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------- 239
                             **     * * ***          * *       *    *              

consensus_12757#0      TGGGGGTATAGAGAACTGTACAAGATTACAGATGAATATGACTCC--------------- 1244
consensus_12757#1      AAAAAAAAAAAAAAAA-------------------------------------------- 676
consensus_12757#2      GGGGGGTATAGAGACCTGTCCAAGATTCCAGAGGAATATGCCTCCTTTGGGTTCCTTTTC 555
consensus_12757#3      ------------------------------------------------------------
                                                                                   

consensus_12757#0      --------------------------------------------
consensus_12757#1      --------------------------------------------
consensus_12757#2      CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT 599
consensus_12757#3      --------------------------------------------
                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)