cluster # 1277

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1277 cluster # 1277 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1277#0 length = 1003 sequences # 2

consensusID : consensus_1277#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1003
fasta sequence

                              [CTCCACTCCAACCACCCCGCGATAGCTGGAGTCACCGGCGTTCACACAGGCGACAGCTCGTGCTCCGGCGATCGACGCGGCGGCCATGGACAAGCTCGGCGCCAACCCGGCCAACTCGTGCGCGCTCACGCCGCTGGGCTTCCTGGAGCGCGCCGCCACCGTGTTCGGCGACTGCCCGTCCGTCGTCTACCACGACACCGTCTTCACGTGGTCGCAGACCCACCGCCGCTGCCTCCGCCTCGCCTCCGCGCTCGTCTCCTCCCTCGGCATCTCCCGCGGCGACGTCGTGTCCGTGCTCCTGCCGAACGTGCCGGCGATGTACGAGATGCACTTCGCCGTGCCGATGAGCGGCGCCGTGCTGAACAGCATCAACACGCGGCTCGACGCGCGCACGGTGTCCGTCCTGCTCCGCCACTCCGGCTCCAAGCTCATCTTCGTCGACCCGGCGCTGCTCCCCGTCCTCCGCGACGCGCTCCGCCTCCTCCCGGCGGGGCACACGGCCCCGCGCGTCGTCCTCGTCGAGGATCCCCATGAGAAGGAGTTCCCTCCCGCCCCCGCCGCCGCGCTGACGTACGAGAGGCTCGTCGAGAAGGGGGACCCGGAGTTCGCGTGGGTGCGGCCGGCGAGCGAGTGGGACCCGATGATCCTCAACTACACCTCCGGCACCACGTCGGCGCCCAAGGGGGTGGTGCACTGCCACCGGGGGATCTTCCTCATCACCGTCGACTCGCTGGTCGACTGGGCGGTGCCGCCGCGGCCGACGTACCTGTGGACGCTCCCCATGTTCCACGCCAATGGCTGGAGCTTCCCATGGGGGATGGCCGTGGTGGGCGGCACCAACGTCTGCCTCCGCCGCGTCGACGCCGCCGAGGTGTTCGACACAATCGCGCGCCGCGGCGTCAACCACCTGTGCGGCGCGCCCGTCGTGCTCAACATGCTGGCGAACGCGCCCGAGGGCGTGCGGAAGCCGCTCCCGGGGAAGGTGCGGATCCTCACGGCCGGC]

[+] EMBL AK106615             [CTCCACTCCAACCACCCCGCGATAGCTGGAGTCACCGGCGTTCACACAGGCGACAGCTCGTGCTCCGGCGATCGACGCGGCGGCCATGGACAAGCTCGGCGCCAACCCGGCCAACTCGTGCGCGCTCACGCCGCTGGGCTTCCTGGAGCGCGCCGCCACCGTGTTCGGCGACTGCCCGTCCGTCGTCTACCACGACACCGTCTTCACGTGGTCGCAGACCCACCGCCGCTGCCTCCGCCTCGCCTCCGCGCTCGTCTCCTCCCTCGGCATCTCCCGCGGCGACGTCGTGTCCGTGCTCCTGCCGAACGTGCCGGCGATGTACGAGATGCACTTCGCCGTGCCGATGAGCGGCGCCGTGCTGAACAGCATCAACACGCGGCTCGACGCGCGCACGGTGTCCGTCCTGCTCCGCCACTCCGGCTCCAAGCTCATCTTCGTCGACCCGGCGCTGCTCCCCGTCCTCCGCGACGCGCTCCGCCTCCTCCCGGCGGGGCACACGGCCCCGCGCGTCGTCCTCGTCGAGGATCCCCATGAGAAGGAGTTCCCTCCCGCCCCCGCCGCCGCGCTGACGTACGAGAGGCTCGTCGAGAAGGGGGACCCGGAGTTCGCGTGGGTGCGGCCGGCGAGCGAGTGGGACCCGATGATCCTCAACTACACCTCCGGCACCACGTCGGCGCCCAAGGGGGTGGTGCACTGCCACCGGGGGATCTTCCTCATCACCGTCGACTCGCTGGTCGACTGGGCGGTGCCGCCGCGGCCGACGTACCTGTGGACGCTCCCCATGTTCCACGCCAATGGCTGGAGCTTCCCATGGGGGATGGCCGTGGTGGGCGGCACCAACGTCTGCCTCCGCCGCGTCGACGCCGCCGAGGTGTTCGACACAATCGCGCGCCGCGGCGTCAACCACCTGTGCGGCGCGCCCGTCGTGCTCAACATGCTGGCGAACGCGCCCGAGGGCGTGCGGAAGCCGCTCCCGGGGAAGGTGCGGATCCTCACGGCCGGC]
[+] EMBL CA754181             [                         CTGGAGTCACCGGCGTTCACACAGGCGACAGCTCGTGCTCCGGCGATCGACGCGGCGGCCATGGACAAGCTCGGCGCCAACCCGGCCAACTCGTGCGCGCTCACGCCGCTGGGCTTCCTGGAGCGCGCCGCCACCGTGTTCGGCGACTGCCCGTCCGTCGTCTACCACGACACCGTCTTCACGTGGTCGCAGACCCACCGCCGCTGCCTCCGCCTCGCCTCCGCGCTCGTCTCCTCCCTCGGCATCTCCCGCGGCGACGTCGTGTCCGTGCTCCTGCCGAACGTGCCGGCGATGTACGAGATGCACTTCGCCGTGCCGATGAGCGGCGCCGTGCTGAACAGCATCAACACGCGGCTCGACGCGCGCACGGTGTCCGTCCTGCTCCGCCACTCCGGCTCCAAGCTCATCTTCGTCGACCCGGCGCTGCTCCCCGTCCTCCGCGACGCGCTCCGCCCCCTCCCGGCGGGGCACACGGCCCCGCGCGTCGTCCTCGTCGAGGATCCCCATGAGAAGGAGTTCCCTCCCGCCCCCGCCGCCGCGCTGACGTACGAGAGGCTCGTCGAGAAGGNGGACCCGGAGTTCGCGTGGGTGCGNCCGGCGA                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_1277#0
CTCCACTCCAACCACCCCGCGATAGCTGGAGTCACCGGCGTTCACACAGGCGACAGCTCG
TGCTCCGGCGATCGACGCGGCGGCCATGGACAAGCTCGGCGCCAACCCGGCCAACTCGTG
CGCGCTCACGCCGCTGGGCTTCCTGGAGCGCGCCGCCACCGTGTTCGGCGACTGCCCGTC
CGTCGTCTACCACGACACCGTCTTCACGTGGTCGCAGACCCACCGCCGCTGCCTCCGCCT
CGCCTCCGCGCTCGTCTCCTCCCTCGGCATCTCCCGCGGCGACGTCGTGTCCGTGCTCCT
GCCGAACGTGCCGGCGATGTACGAGATGCACTTCGCCGTGCCGATGAGCGGCGCCGTGCT
GAACAGCATCAACACGCGGCTCGACGCGCGCACGGTGTCCGTCCTGCTCCGCCACTCCGG
CTCCAAGCTCATCTTCGTCGACCCGGCGCTGCTCCCCGTCCTCCGCGACGCGCTCCGCCT
CCTCCCGGCGGGGCACACGGCCCCGCGCGTCGTCCTCGTCGAGGATCCCCATGAGAAGGA
GTTCCCTCCCGCCCCCGCCGCCGCGCTGACGTACGAGAGGCTCGTCGAGAAGGGGGACCC
GGAGTTCGCGTGGGTGCGGCCGGCGAGCGAGTGGGACCCGATGATCCTCAACTACACCTC
CGGCACCACGTCGGCGCCCAAGGGGGTGGTGCACTGCCACCGGGGGATCTTCCTCATCAC
CGTCGACTCGCTGGTCGACTGGGCGGTGCCGCCGCGGCCGACGTACCTGTGGACGCTCCC
CATGTTCCACGCCAATGGCTGGAGCTTCCCATGGGGGATGGCCGTGGTGGGCGGCACCAA
CGTCTGCCTCCGCCGCGTCGACGCCGCCGAGGTGTTCGACACAATCGCGCGCCGCGGCGT
CAACCACCTGTGCGGCGCGCCCGTCGTGCTCAACATGCTGGCGAACGCGCCCGAGGGCGT
GCGGAAGCCGCTCCCGGGGAAGGTGCGGATCCTCACGGCCGGC

clustalw multiple alignements is not computed in this case