cluster # 12771

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12771 cluster # 12771 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12771#0 length = 2219 sequences # 8

consensus_12771#1 length = 803 sequences # 3

consensusID : consensus_12771#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2219
fasta sequence

                              [CTCTCTCCAGATCTCGCCCCACCGCCATGGACGTCCTCGACGCCGGCCACCGCGCCACGCCGGAGCCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGACATGTCCGGCGCCTCCGTCCTCCCGCTCGCCGGCGCCGCCTACCAGCCCTACGTCTCCGAGCTCCTCTCCTTCTCCATCGAGCGCCTCCACAAGGAGCCGGAGCTGCTGCGGGTGGACGCGGAGCGGGTGCGGCGGCAGATGCAGGAGGTGGCGGTGGAGAACTACGGGGCCTTCATCGCCGCATCCGAGGCGCTCTCCTTCGTCCGCGCGCAGCTCGAGGGGTTCGACAGGCACCTCGAGGCACTGATAGAGGAGATACCGAATTTAACATCTGGCTGCACCGAGTTTGTTGAGTCAGCACAGCAAATTTTAGAAGAGAGGAAGCTCAATCAGACATTACTAGCCAATCACAGCACACTGCTTGATCTGCTTGAAATCCCACAACTGATGGACACATGTATACGAAATGGGAACTATGATGAGGCACTTGACCTGGAAGCCTTTGTTAGTAAAATATCAAAGTTGCACCCTGATTTACCTGTTATCCAAGGCTTAGCTGTTGAAGTCAAGAAGACAATACAGTCATTAATTTCTCAGCTTCTCCAGAAGCTTCGATCAAATATTCAGTTGCCTGAATGCCTCCGTATTGTTGCACATTTGCGCCGCATTGGAGTGTTCAGTGAATCAGAATTGCGTTTACAGTTCTTGAGATGCAGGGAAGCTTGGCTTTCTGGGATTCTTGATGACCTGGACCAAAGGAATGTATATGGGTATCTAACAGGCATGGTGGGTTACCACAGAACACATCTATTTGATGTTGTCAATCAATATCGAGCAATATTCAACAATGATAAGTCCGGAAGTGATGAGAACTACGATGGTGGATTGCTTTTCAGCTGGGCAATGCACCAAATAAGTAATCATCTTACCACTCTTCAAGTTATGTTGCCAAATATAACGGAAGGTGGCTCTCTCTCCAACATTCGTGAACAGTGCATGTATTGTGCAATGGGCCTTGGCTTGGTTGGACTGGATTTCCGTGGCTTACTTCCACCAATTTTTGAAAAAGCTGTGTTAAATTTGTTTTCAAAGAACATGGGTACAGCAGTCGAGAATTTTCAGGTTGTTCTGGATTCACATCGTTGGGTTCCAATGCCATCTGTTGGCTTTGTAGCGAATGGAGTTGTGGATGAGACTTCTGATGATGTGACGCCGCCTTCTGTTTTAATGGAGCATCCACCTCTTGCAGTCTTTGTCAATGGTGTTTCAGCGGCAATGAATGAGCTAAGACCGTGCGCACCATTGAGCTTGAAAAATGTACTTGCCGAGGAGGTGGTGAAGGGATTACAAGCCGTTTCTGACTCCCTAGTCAGATACAATGCCATGCGGATGCTGCGTGGAAATGAGTCCTCTCTTTTCCTTTCACTTTGCCAGGCATTTATTGAGGTCGCATATCCTTACTGCTCTGCATGTTTTGGCCGATGCTACCCCAATGGAGCAATATTGATCACAGAGCGACGAAGCACATTCGACGCAGTCAGCCAGCTGCTGACTGTACCTGCAAGGTCCAACAGCT-CA-GGGATCAG-CATCGAACGGAGGCAATCAGGCA-G-CATTGAGAG-AAAACAGTCTGGAGCCATTGAACGTAAGCAATCGGAAGGCATCGAAAGAAAGCAGTCGATCGACGAGAGCGCGGGGACAACAGCCACCGACAATGGGACCCCAGCTAACGGACCACCTCCAGTGGCGAACGATGATTCTGGGACCTCCTCAGCACCAGCTCAGCCTGATGGGCAAACCACTGCAGCAGCAAGTACGTAGCTTTGACTTTGTTAATGCCTTTGATGGAACCTGTCGAAGTTTTTTGGTCATGGCCTTGGGTTATCGTCAGCCAACAAGTGTCTCTACTGCAAGATTATGCCTGA-CGAGAGTTCAGTTTCGGTTTTCTCATGGTCTTACAATGTATACA-AGCATCTCATACCAAGATCTCGGATCTTAATTTGTACAATACAGCCATTAATTTTTTTAGCTGGTCATCATTAGTCCATACCTAGATGTTGTAGAGTGAAAGATTGTTTCAGGGTGACAATAAGCCGATAATGTGAAGTGAGCGTGCTACGTTGTTAACTGCAGAGTACTGCGCCTCTATGTTTTCTTCTTTTCCATTAAATTACTGTTCAT]

[+] EMBL AK067402             [CTCTCTCCAGATCTCGCCCCACCGCCATGGACGTCCTCGACGCCGGCCACCGCGCCACGCCGGAGCCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGACATGTCCGGCGCCTCCGTCCTCCCGCTCGCCGGCGCCGCCTACCAGCCCTACGTCTCCGAGCTCCTCTCCTTCTCCATCGAGCGCCTCCACAAGGAGCCGGAGCTGCTGCGGGTGGACGCGGAGCGGGTGCGGCGGCAGATGCAGGAGGTGGCGGTGGAGAACTACGGGGCCTTCATCGCCGCATCCGAGGCGCTCTCCTTCGTCCGCGCGCAGCTCGAGGGGTTCGACAGGCACCTCGAGGCACTGATAGAGGAGATACCGAATTTAACATCTGGCTGCACCGAGTTTGTTGAGTCAGCACAGCAAATTTTAGAAGAGAGGAAGCTCAATCAGACATTACTAGCCAATCACAGCACACTGCTTGATCTGCTTGAAATCCCACAACTGATGGACACATGTATACGAAATGGGAACTATGATGAGGCACTTGACCTGGAAGCCTTTGTTAGTAAAATATCAAAGTTGCACCCTGATTTACCTGTTATCCAAGGCTTAGCTGTTGAAGTCAAGAAGACAATACAGTCATTAATTTCTCAGCTTCTCCAGAAGCTTCGATCAAATATTCAGTTGCCTGAATGCCTCCGTATTGTTGCACATTTGCGCCGCATTGGAGTGTTCAGTGAATCAGAATTGCGTTTACAGTTCTTGAGATGCAGGGAAGCTTGGCTTTCTGGGATTCTTGATGACCTGGACCAAAGGAATGTATATGGGTATCTAACAGGCATGGTGGGTTACCACAGAACACATCTATTTGATGTTGTCAATCAATATCGAGCAATATTCAACAATGATAAGTCCGGAAGTGATGAGAACTACGATGGTGGATTGCTTTTCAGCTGGGCAATGCACCAAATAAGTAATCATCTTACCACTCTTCAAGTTATGTTGCCAAATATAACGGAAGGTGGCTCTCTCTCCAACATTCGTGAACAGTGCATGTATTGTGCAATGGGCCTTGGCTTGGTTGGACTGGATTTCCGTGGCTTACTTCCACCAATTTTTGAAAAAGCTGTGTTAAATTTGTTTTCAAAGAACATGGGTACAGCAGTCGAGAATTTTCAGGTTGTTCTGGATTCACATCGTTGGGTTCCAATGCCATCTGTTGGCTTTGTAGCGAATGGAGTTGTGGATGAGACTTCTGATGATGTGACGCCGCCTTCTGTTTTAATGGAGCATCCACCTCTTGCAGTCTTTGTCAATGGTGTTTCAGCGGCAATGAATGAGCTAAGACCGTGCGCACCATTGAGCTTGAAAAATGTACTTGCCGAGGAGGTGGTGAAGGGATTACAAGCCGTTTCTGACTCCCTAGTCAGATACAATGCCATGCGGATGCTGCGTGGAAATGAGTCCTCTCTTTTCCTTTCACTTTGCCAGGCATTTATTGAGGTCGCATATCCTTACTGCTCTGCATGTTTTGGCCGATGCTACCCCAATGGAGCAATATTGATCACAGAGCGACGAAGCACATTCGACGCAGTCAGCCAGCTGCTGACTGTACCTGCAAGGTCCAACAGCT CA GGGATCAG CATCGAACGGAGGCAATCAGGCA G CATTGAGAG AAAACAGTCTGGAGCCATTGAACGTAAGCAATCGGAAGGCATCGAAAGAAAGCAGTCGATCGACGAGAGCGCGGGGACAACAGCCACCGACAATGGGACCCCAGCTAACGGACCACCTCCAGTGGCGAACGATGATTCTGGGACCTCCTCAGCACCAGCTCAGCCTGATGGGCAAACCACTGCAGCAGCAAGTACGTAGCTTTGACTTTGTTAATGCCTTTGATGGAACCTGTCGAAGTTTTTTGGTCATGGCCTTGGGTTATCGTCAGCCAACAAGTGTCTCTACTGCAAGATTATGCCTGA CGAGAGTTCAGTTTCGGTTTTCTCATGGTCTTACAATGTATACA AGCATCTCATACCAAGATCTCGGATCTTAATTTGTACAATACAGCCATTAATTTTTTTAGCTGGTCATCATTAGTCCATACCTAGATGTTGTAGAGTGAAAGATTGTTTCAGGGTGACAATAAGCCGATAATGTGAAGTGAGCGTGCTACGTTGTTAACTGCAGAGTACTGCGCCTCTATGTTTTCTTCTTTTCCATTAAATTACTGTTCAT]
[-] EMBL CB656819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAATGTACTTGCCGAGGAGGTGGTGAAGGGATTACAAGCCGTTTCTGACTCCCTAGTCAGATACAATGCCATGCGGATGCTGCGTGGAAATGAGTCCTCTCTTTTCCTTTCACTTTGCCAGGCATTTATTGAGGTCGCATATCCTTACTGCTCTGCATGTTTTGGCCGATGCTACCCCAATGGAGCAATATTGATCACAGAGCGACGAAGCACATTCGACGCAGTCAGCCAGCTGCTGACTGTACCTGCAAGGTCCAACAGCT CA GGGATCAG CATCGAACGGAGGCAATCAGGCA G CATTGAGAG AAAACAGTCTGGAGCCATTGAACGTAAGCAATCGGAAGGCATCGAAAGAAAGCAGTCGATCGACGAGAGCGCGGGGACAACAGCCACCGACAATGGGACCCCAGCTAACGGACCACCTCCAGTGGCGAACGATGATTTTGGGACCTCCTCAGCACCAGCTCAGCCTGATGGGCAAACCACTGCAGCAGCAAGTACGTAGCTTTGACTTTGTTAATGCCTTTGATGGAACCTGTCGAAGTTTTTTGGTCATGGCCTTGGGTTATCGTCAGCCAACAAGTGTCTCTACTGCAAGATTATGCCTGA CGAGAGTTCAGTTTCGGTTTTCTCATGGTCTTACAATGTATACA AGCATCTCATACCAAGATCTCGGATCTTAATTTGTACAATACAGCCATTAATTTTTTTAGCTGGTCATCATTAGTCCATACCTAGATGTTGTAGAGTGAAAGATTGTTTCAGGGTGACAATAAGCCGATAATGTGAAGTGAGCGTGC                                                                 ]
[-] EMBL CB656879             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGATTACAAGCCGTTTCTGACTCCCTAGTCAGATACAATGCCATGCGGATGCTGCGTGGAAATGAGTCCTCTCTTTTCCTTTCACTTTGCCAGGCATTTATTGAGGTCGCATATCCTTACTGCTCTGCATGTTTTGGCCGATGCTACCCCAATGGAGCAATATTGATCACAGAGCGACGAAGCACATTCGACGCAGTCAGCCAGCTGCTGACTGTACCTGCAAGGTCCAACAGCT CA GGGATCAG CATCGAACGGAGGCAATCAGGCA G CATTGAGAG AAAACAGTCTGGAGCCATTGAACGTAAGCAATCGGAAGGCATCGAAAGAAAGCAGTCGATCGACGAGAGCGCGGGGACAACAGCCACCGACAATGGGACCCCAGCTAACGGACCACCTCCAGTGGCGAACGATGATTCTGGGACCTCCTCAGCACCAGCTCAGCCTGATGGGCAAACCACTGCAGCAGCAAGTACGTAGCTTTGACTTTGTTAATGCCTTTGATGGAACCTGTCGAAGTTTTTTGGTCATGGCCTTGGGTTATCGTCAGCCAACAAGTGTCTCTACTGCAAGATTATGCCTGA CGAGAGTTCAGTTTCGGTTTTCTCATGGTCTTACAATGTATACA AGCATCTCATACCAAGATCTCGGATCTTAATTTGTACAATACAGCCATTAATTTTTTTAGCTGGTCATCATTAGTCCATACCTAGATGTTGTAGAGTGAAAGATTGTTTCAGGGTGACAATAAGCCGATAATGTGAAGTGAGCGTGC                                                                 ]
[+] EMBL CA999093             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCATGCGGATGCTGCGTGGAAATGAGTCCTCTCTTTTCCTTTCACTTTGCCAGGCATTTATTGAGGTCGCATATCCTTACTGCTCTGCATGTTTTGGCCGATGCTACCCCAATGGAGCAATATTGATCACAGAGCGACGAAGCACATTCGACGCAGTCAGCCAGCTGCTGACTGTACCTGCAAGGTCCAACAGCT CA GGGATCAG CATCGAACGGAGGCAATCAGGCA G CATTGAGAG AAAACAGTCTGGAGCCATTGAACGTAAGCAATCGGAAGGCATCGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB000682             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CATGCGGATGCTGCGTGGAAATGAGTCCTCTCTTTTCCTTTCACTTTGCCAGGCATTTATTGAGGTCGCATATCCTTACTGCTCTGCATGTTTTGGCCGATGCTACCCCAATGGAGCAATATTGATCACAGAGCGACGAAGCACATTCGACGCAGTCAGCCAGCTGCTGACTGTACCTGCAAGGTCCAACAGCT CA GGGATCAG CATCGAACGGAGGCAATCAGGCA G CATTGAGAG AAAACAGTCTGGAGCCATTGAACGTAAGCAATCGGAAGGCATCGAAAGAAAGCAGTCGATCGACGAGAGCGCGGGGACAACAGCCACCGACAATGGGACCCCAGCTAACGGACCACCTCCAGTGGCGAACGATGATTCTGGGACCTCCTCAGCACCAGCTCAGCCTGATGGGCAAACCACTGCAGCAGCAAGTACGTAGCTTTGACTTTGTTAATGCCTTTGATGGAACCTGTCGAAGTTTTTTGGTCATGGCCTTGGGTTATCGTCAGCCAACAAGTGTC                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA753093             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGTCCTCTCTTTTCCTTTCACTTTGCCAGGCATTTATTGAGGTCGCATATCCTTACTGCTCTGCATGTTTTGGCCGATGCTACCCCAATGGAGCAATATTGATCACAGAGCGACGAAGCACATTCGACGCAGTCAGCCAGCTGCTGACTGTACCTGCAAGGTCCAACAGCT CA GGGATCAG CATCGAACGGAGGCAATCAGGCA G CATTGAGAG AAAACAGTCTGGAGCCATTGAACGTAAGCAATCGGAAGGCATCGAAAGAAAGCAGTCGATCGACGAGAGCGCGGGGACAACAGCCACCGACAATGGGACCCCAGCTAACGGACCACCTCCAGTGGCGAACGATGATTCTGGGACCTCCTCAGCACCAGCTCAGCCTGATGGGCAAACCACTGCAGCAGCAAGTACGTAGCTTTGACTTTGTTAATGCCTTTGATGGAACCTGTCGAAGTNTTTTGGTCATGGCCTTGGGTTATCGTCAGCCAACAAGTGTCTCTACTGCAAGATTATGCCTGA CGAGAGTNCAGTTTCGGTTTTCTCATGGTCCTACAATGTATACA AGCATCTCATACCAAGATCTCGGATCTT ATNTGTACACTACAGCCA TNANTNTTNTAGCTGGT ATCATAGGTCC TACCTAAATG TGTAGAGTGAAGGAATGTc                                                                                                        ]
[+] EMBL BM037826             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCCACCAGCTCCAGGGGATCAGCCATCGAACGGAGCCCATCAGGCACGCCCTTGAGAGAAAAACAGTCTGGAGCC TTGAACGTAACCAATCGGAAGGCATCGAAAGAAA CAGTCGATCGACGAGAGCGCGGGGACAACAGCCACCGACAATGGGACCCCAGCTAACGGACCACCTCCAGTGGCGAACGATGATTCTGGGACCTCCTCAGCACCAGCTCAGCCTGATGGGCAAACCACTGCAGCAGCAAGTACGTAGCTTTGACTTTGTTAATGCCTTTGATGGAACCTGTCGAAGTTTTTTGGTCATGGCCTTGGGTTATCGTCAGCC ACAAGTGTCTCTACTGCAAGATTATGCCTGACCGAGAGTTCAGTTTCGGTTTTCTCATGGTCTTAC ATGTATACACAGCCTCTCATACCAAGATCTCGGATCTTAATTTGTAC ATACAGCC TTAATTTTTTTAGCTGGTCATCATTAGTCCATACCTAGATGTTGTAGAGTGAAAGATTGTTTCAGGGTGAC ATAAGCCGATAATGTGAAGTGAGCGTGCTACGTTGTTAACTGCAaaaaaaa                                          ]
[+] EMBL AA749782             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTTTGACTTTGTTAATGCCTTTGATGGAACCTGTCGAAGTTTTTTNGTCATGGCCTTGGGTTATCNNCAGCCAACAAGTGTCTCTACTGCAAGATTATGCCTGA CNAGA                                                                                                                                                                                                                                                            ]




>consensus_12771#0
CTCTCTCCAGATCTCGCCCCACCGCCATGGACGTCCTCGACGCCGGCCACCGCGCCACGC
CGGAGCCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGACATGTCCGGCGCCTCCGTCC
TCCCGCTCGCCGGCGCCGCCTACCAGCCCTACGTCTCCGAGCTCCTCTCCTTCTCCATCG
AGCGCCTCCACAAGGAGCCGGAGCTGCTGCGGGTGGACGCGGAGCGGGTGCGGCGGCAGA
TGCAGGAGGTGGCGGTGGAGAACTACGGGGCCTTCATCGCCGCATCCGAGGCGCTCTCCT
TCGTCCGCGCGCAGCTCGAGGGGTTCGACAGGCACCTCGAGGCACTGATAGAGGAGATAC
CGAATTTAACATCTGGCTGCACCGAGTTTGTTGAGTCAGCACAGCAAATTTTAGAAGAGA
GGAAGCTCAATCAGACATTACTAGCCAATCACAGCACACTGCTTGATCTGCTTGAAATCC
CACAACTGATGGACACATGTATACGAAATGGGAACTATGATGAGGCACTTGACCTGGAAG
CCTTTGTTAGTAAAATATCAAAGTTGCACCCTGATTTACCTGTTATCCAAGGCTTAGCTG
TTGAAGTCAAGAAGACAATACAGTCATTAATTTCTCAGCTTCTCCAGAAGCTTCGATCAA
ATATTCAGTTGCCTGAATGCCTCCGTATTGTTGCACATTTGCGCCGCATTGGAGTGTTCA
GTGAATCAGAATTGCGTTTACAGTTCTTGAGATGCAGGGAAGCTTGGCTTTCTGGGATTC
TTGATGACCTGGACCAAAGGAATGTATATGGGTATCTAACAGGCATGGTGGGTTACCACA
GAACACATCTATTTGATGTTGTCAATCAATATCGAGCAATATTCAACAATGATAAGTCCG
GAAGTGATGAGAACTACGATGGTGGATTGCTTTTCAGCTGGGCAATGCACCAAATAAGTA
ATCATCTTACCACTCTTCAAGTTATGTTGCCAAATATAACGGAAGGTGGCTCTCTCTCCA
ACATTCGTGAACAGTGCATGTATTGTGCAATGGGCCTTGGCTTGGTTGGACTGGATTTCC
GTGGCTTACTTCCACCAATTTTTGAAAAAGCTGTGTTAAATTTGTTTTCAAAGAACATGG
GTACAGCAGTCGAGAATTTTCAGGTTGTTCTGGATTCACATCGTTGGGTTCCAATGCCAT
CTGTTGGCTTTGTAGCGAATGGAGTTGTGGATGAGACTTCTGATGATGTGACGCCGCCTT
CTGTTTTAATGGAGCATCCACCTCTTGCAGTCTTTGTCAATGGTGTTTCAGCGGCAATGA
ATGAGCTAAGACCGTGCGCACCATTGAGCTTGAAAAATGTACTTGCCGAGGAGGTGGTGA
AGGGATTACAAGCCGTTTCTGACTCCCTAGTCAGATACAATGCCATGCGGATGCTGCGTG
GAAATGAGTCCTCTCTTTTCCTTTCACTTTGCCAGGCATTTATTGAGGTCGCATATCCTT
ACTGCTCTGCATGTTTTGGCCGATGCTACCCCAATGGAGCAATATTGATCACAGAGCGAC
GAAGCACATTCGACGCAGTCAGCCAGCTGCTGACTGTACCTGCAAGGTCCAACAGCTCAG
GGATCAGCATCGAACGGAGGCAATCAGGCAGCATTGAGAGAAAACAGTCTGGAGCCATTG
AACGTAAGCAATCGGAAGGCATCGAAAGAAAGCAGTCGATCGACGAGAGCGCGGGGACAA
CAGCCACCGACAATGGGACCCCAGCTAACGGACCACCTCCAGTGGCGAACGATGATTCTG
GGACCTCCTCAGCACCAGCTCAGCCTGATGGGCAAACCACTGCAGCAGCAAGTACGTAGC
TTTGACTTTGTTAATGCCTTTGATGGAACCTGTCGAAGTTTTTTGGTCATGGCCTTGGGT
TATCGTCAGCCAACAAGTGTCTCTACTGCAAGATTATGCCTGACGAGAGTTCAGTTTCGG
TTTTCTCATGGTCTTACAATGTATACAAGCATCTCATACCAAGATCTCGGATCTTAATTT
GTACAATACAGCCATTAATTTTTTTAGCTGGTCATCATTAGTCCATACCTAGATGTTGTA
GAGTGAAAGATTGTTTCAGGGTGACAATAAGCCGATAATGTGAAGTGAGCGTGCTACGTT
GTTAACTGCAGAGTACTGCGCCTCTATGTTTTCTTCTTTTCCATTAAATTACTGTTCAT

consensusID : consensus_12771#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 803
fasta sequence

                              [ACGTCCTCGACGCCGGCCACCGCGCCACGCCGGAGCCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGACATGTCCGGCGCCTCCGTCCTCCCGCTCGCCGGCGCCGCCTACCAGCCCTACGTCTCCGAGCTCCTCTCCTTCTCCATCGAGCGCCTCCACAAGGAGCCGGAGCTGCTGCGGGTGGACGCGGAGCGGGTGCGGCGGCAGATGCAGGAGGTGGCGGTGGAGAACTACGGGGCCTTCATCGCCGCATCCGAGGCGCTCTCCTTCGTCCGCGCGCAGCTCGAGGGGTTCGACAGGCACCTCGAGGCACTGATAGAGGAGATACCGAATTTAACATCTGGCTGCACCGAGTTTGTTGAGTCAGCACAGCAAATTTTAGAAGAGAGGAAGCTCAATCAGACATTACTAGCCAATCACAGCACACTGCTTGATCTGCTTGAAATCCCACAACTGATGGACACATGTATACGAAATGGGAACTATGATGAGGCACTTGACCTGGAAGCCTTTGTTAGTAAAATATCAAAGTTGCACCCTGATTTACCTGTTATCCAAGGCTTAGCTGTTGAAGTCAAGAAGACAATACAGTCATTAATTTCTCAGCTTCTCCAGAAGCTTCGATCAAATATTCAGTTGCCTGAATGCCTCCGTATTGTTGCACATTTGCGCCGCATTGGAGTGTTCAGTGAATCAGAATTGCGTTTACAGGGAAGCTTGGCTTTCTGGGATTCTTGATGACCTGGACCANAGGAATGTATATGGGTATCTAACAGGCATGGTGGGTTACCACAGAACACA]

[+] EMBL CB656878             [ACGTCCTCGACGCCGGCCACCGCGCCACGCCGGAGCCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGACATGTCCGGCGCCTCCGTCCTCCCGCTCGCCGGCGCCGCCTACCAGCCCTACGTCTCCGAGCTCCTCTCCTTCTCCATCGAGCGCCTCCACAAGGAGCCGGAGCTGCTGCGGGTGGACGCGGAGCGGGTGCGGCGGCAGATGCAGGAGGTGGCGGTGGAGAACTACGGGGCCTTCATCGCCGCATCCGAGGCGCTCTCCTTCGTCCGCGCGCAGCTCGAGGGGTTCGACAGGCACCTCGAGGCACTGATAGAGGAGATACCGAATTTAACATCTGGCTGCACCGAGTTTGTTGAGTCAGCACAGCAAATTTTAGAAGAGAGGAAGCTCAATCAGACATTACTAGCCAATCACAGCACACTGCTTGATCTGCTTGAAATCCCACAACTGATGGACACATGTATACGAAATGGGAACTATGATGAGGCACTTGACCTGGAAGCCTTTGTTAGTAAAATATCAAAGTTGCACCCTGATTTACCTGTTATCCAAGGCTTAGCTGTTGAAGTCAAGAAGACAATACAGTCATTAATTTCTCAGCTTCTCCAGAAGCTTCGATCAAATATTCAGTTGCCTGAATGCCTCCGTATTGTTGCACATTTGCGCCGCATTGGAGTGTTCAGTGAATCAGAATTGCGTTTACAGGGAAGCTTGGCTTTCTGGGATTCTTGATGACCTGGACCANAGGAATGTATATGGGTATCTAACAGGCATGGTGGGTTACCACAGAACACA]
[+] EMBL CB656818             [ACGTCCTCGACGCCGGCCACCGCGCCACGCCGGAGCCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGACATGTCCGGCGCCTCCGTCCTCCCGCTCGCCGGCGCCGCCTACCAGCCCTACGTCTCCGAGCTCCTCTCCTTCTCCATCGAGCGCCTCCACAAGGAGCCGGAGCTGCTGCGGGTGGACGCGGAGCGGGTGCGGCGGCAGATGCAGGAGGTGGCGGTGGAGAACTACGGGGCCTTCATCGCCGCATCCGAGGCGCTCTCCTTCGTCCGCGCGCAGCTCGAGGGGTTCGACAGGCACCTCGAGGCACTGATAGAGGAGATACCGAATTTAACATCTGGCTGCACCGAGTTTGTTGAGTCAGCACAGCAAATTTTAGAAGAGAGGAAGCTCAATCAGACATTACTAGCCAATCACAGCACACTGCTTGATCTGCTTGAAATCCCACAACTGATGGACACATGTATACGAAATGGGAACTATGATGAGGCACTTGACCTGGAAGCCTTTGTTAGTAAAATATCAAAGTTGCACCCTGATTTACCTGTTATCCAAGGCTTAGCTGTTGAAGTCAAGAAGACAATACAGTCATTAATTTCTCAGCTTCTCCAGAAGCTTCGATCAAATATTCAGTTGCCTGAATGCCTCCGTATTGTTGCACATTTGCGCCGCATTGGAGTGTTCAGTGAATCAGAATTGCGTTTACAGGGAAGCTTGGCTTTCTGGGATTCTTGATGACCTGGACCAAAGGAATGTATATGGGTATCTAACAGGCATGGTGGGTTACCACAGAACAC ]
[+] EMBL CF303500             [                                                                                                                                                                                                                                                                                                                                                                                                                                      cGCACACTGCTTGATCTGCTTGAAATCCCACAACTGATGGACACATGTATACGAAATGGGAACTATGATGAGGCACTTGACCTGGAAGCCTTTGTTAGTAAAATATCAAAGTTG                                                                                                                                                                                                                                                                           ]




>consensus_12771#1
ACGTCCTCGACGCCGGCCACCGCGCCACGCCGGAGCCCTCCTCCTCCTCCTCCTCCGCCG
CCGCCGCCGACATGTCCGGCGCCTCCGTCCTCCCGCTCGCCGGCGCCGCCTACCAGCCCT
ACGTCTCCGAGCTCCTCTCCTTCTCCATCGAGCGCCTCCACAAGGAGCCGGAGCTGCTGC
GGGTGGACGCGGAGCGGGTGCGGCGGCAGATGCAGGAGGTGGCGGTGGAGAACTACGGGG
CCTTCATCGCCGCATCCGAGGCGCTCTCCTTCGTCCGCGCGCAGCTCGAGGGGTTCGACA
GGCACCTCGAGGCACTGATAGAGGAGATACCGAATTTAACATCTGGCTGCACCGAGTTTG
TTGAGTCAGCACAGCAAATTTTAGAAGAGAGGAAGCTCAATCAGACATTACTAGCCAATC
ACAGCACACTGCTTGATCTGCTTGAAATCCCACAACTGATGGACACATGTATACGAAATG
GGAACTATGATGAGGCACTTGACCTGGAAGCCTTTGTTAGTAAAATATCAAAGTTGCACC
CTGATTTACCTGTTATCCAAGGCTTAGCTGTTGAAGTCAAGAAGACAATACAGTCATTAA
TTTCTCAGCTTCTCCAGAAGCTTCGATCAAATATTCAGTTGCCTGAATGCCTCCGTATTG
TTGCACATTTGCGCCGCATTGGAGTGTTCAGTGAATCAGAATTGCGTTTACAGGGAAGCT
TGGCTTTCTGGGATTCTTGATGACCTGGACCANAGGAATGTATATGGGTATCTAACAGGC
ATGGTGGGTTACCACAGAACACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12771#0      CTCTCTCCAGATCTCGCCCCACCGCCATGGACGTCCTCGACGCCGGCCACCGCGCCACGC 60
consensus_12771#1      ------------------------------ACGTCCTCGACGCCGGCCACCGCGCCACGC 30
                                                     ******************************

consensus_12771#0      CGGAGCCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGACATGTCCGGCGCCTCCGTCC 120
consensus_12771#1      CGGAGCCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGACATGTCCGGCGCCTCCGTCC 90
                       ************************************************************

consensus_12771#0      TCCCGCTCGCCGGCGCCGCCTACCAGCCCTACGTCTCCGAGCTCCTCTCCTTCTCCATCG 180
consensus_12771#1      TCCCGCTCGCCGGCGCCGCCTACCAGCCCTACGTCTCCGAGCTCCTCTCCTTCTCCATCG 150
                       ************************************************************

consensus_12771#0      AGCGCCTCCACAAGGAGCCGGAGCTGCTGCGGGTGGACGCGGAGCGGGTGCGGCGGCAGA 240
consensus_12771#1      AGCGCCTCCACAAGGAGCCGGAGCTGCTGCGGGTGGACGCGGAGCGGGTGCGGCGGCAGA 210
                       ************************************************************

consensus_12771#0      TGCAGGAGGTGGCGGTGGAGAACTACGGGGCCTTCATCGCCGCATCCGAGGCGCTCTCCT 300
consensus_12771#1      TGCAGGAGGTGGCGGTGGAGAACTACGGGGCCTTCATCGCCGCATCCGAGGCGCTCTCCT 270
                       ************************************************************

consensus_12771#0      TCGTCCGCGCGCAGCTCGAGGGGTTCGACAGGCACCTCGAGGCACTGATAGAGGAGATAC 360
consensus_12771#1      TCGTCCGCGCGCAGCTCGAGGGGTTCGACAGGCACCTCGAGGCACTGATAGAGGAGATAC 330
                       ************************************************************

consensus_12771#0      CGAATTTAACATCTGGCTGCACCGAGTTTGTTGAGTCAGCACAGCAAATTTTAGAAGAGA 420
consensus_12771#1      CGAATTTAACATCTGGCTGCACCGAGTTTGTTGAGTCAGCACAGCAAATTTTAGAAGAGA 390
                       ************************************************************

consensus_12771#0      GGAAGCTCAATCAGACATTACTAGCCAATCACAGCACACTGCTTGATCTGCTTGAAATCC 480
consensus_12771#1      GGAAGCTCAATCAGACATTACTAGCCAATCACAGCACACTGCTTGATCTGCTTGAAATCC 450
                       ************************************************************

consensus_12771#0      CACAACTGATGGACACATGTATACGAAATGGGAACTATGATGAGGCACTTGACCTGGAAG 540
consensus_12771#1      CACAACTGATGGACACATGTATACGAAATGGGAACTATGATGAGGCACTTGACCTGGAAG 510
                       ************************************************************

consensus_12771#0      CCTTTGTTAGTAAAATATCAAAGTTGCACCCTGATTTACCTGTTATCCAAGGCTTAGCTG 600
consensus_12771#1      CCTTTGTTAGTAAAATATCAAAGTTGCACCCTGATTTACCTGTTATCCAAGGCTTAGCTG 570
                       ************************************************************

consensus_12771#0      TTGAAGTCAAGAAGACAATACAGTCATTAATTTCTCAGCTTCTCCAGAAGCTTCGATCAA 660
consensus_12771#1      TTGAAGTCAAGAAGACAATACAGTCATTAATTTCTCAGCTTCTCCAGAAGCTTCGATCAA 630
                       ************************************************************

consensus_12771#0      ATATTCAGTTGCCTGAATGCCTCCGTATTGTTGCACATTTGCGCCGCATTGGAGTGTTCA 720
consensus_12771#1      ATATTCAGTTGCCTGAATGCCTCCGTATTGTTGCACATTTGCGCCGCATTGGAGTGTTCA 690
                       ************************************************************

consensus_12771#0      GTGAATCAGAATTGCGTTTACAGTTCTTGAGATGCAGGGAAGCTTGGCTTTCTGGGATTC 780
consensus_12771#1      GTGAATCAGAATTGCGTTTACAG--------------GGAAGCTTGGCTTTCTGGGATTC 736
                       ***********************              ***********************

consensus_12771#0      TTGATGACCTGGACCAAAGGAATGTATATGGGTATCTAACAGGCATGGTGGGTTACCACA 840
consensus_12771#1      TTGATGACCTGGACCANAGGAATGTATATGGGTATCTAACAGGCATGGTGGGTTACCACA 796
                       **************** *******************************************

consensus_12771#0      GAACACATCTATTTGATGTTGTCAATCAATATCGAGCAATATTCAACAATGATAAGTCCG 900
consensus_12771#1      GAACACA----------------------------------------------------- 803
                       *******                                                     

consensus_12771#0      GAAGTGATGAGAACTACGATGGTGGATTGCTTTTCAGCTGGGCAATGCACCAAATAAGTA 960
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      ATCATCTTACCACTCTTCAAGTTATGTTGCCAAATATAACGGAAGGTGGCTCTCTCTCCA 1020
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      ACATTCGTGAACAGTGCATGTATTGTGCAATGGGCCTTGGCTTGGTTGGACTGGATTTCC 1080
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      GTGGCTTACTTCCACCAATTTTTGAAAAAGCTGTGTTAAATTTGTTTTCAAAGAACATGG 1140
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      GTACAGCAGTCGAGAATTTTCAGGTTGTTCTGGATTCACATCGTTGGGTTCCAATGCCAT 1200
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      CTGTTGGCTTTGTAGCGAATGGAGTTGTGGATGAGACTTCTGATGATGTGACGCCGCCTT 1260
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      CTGTTTTAATGGAGCATCCACCTCTTGCAGTCTTTGTCAATGGTGTTTCAGCGGCAATGA 1320
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      ATGAGCTAAGACCGTGCGCACCATTGAGCTTGAAAAATGTACTTGCCGAGGAGGTGGTGA 1380
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      AGGGATTACAAGCCGTTTCTGACTCCCTAGTCAGATACAATGCCATGCGGATGCTGCGTG 1440
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      GAAATGAGTCCTCTCTTTTCCTTTCACTTTGCCAGGCATTTATTGAGGTCGCATATCCTT 1500
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      ACTGCTCTGCATGTTTTGGCCGATGCTACCCCAATGGAGCAATATTGATCACAGAGCGAC 1560
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      GAAGCACATTCGACGCAGTCAGCCAGCTGCTGACTGTACCTGCAAGGTCCAACAGCTCAG 1620
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      GGATCAGCATCGAACGGAGGCAATCAGGCAGCATTGAGAGAAAACAGTCTGGAGCCATTG 1680
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      AACGTAAGCAATCGGAAGGCATCGAAAGAAAGCAGTCGATCGACGAGAGCGCGGGGACAA 1740
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      CAGCCACCGACAATGGGACCCCAGCTAACGGACCACCTCCAGTGGCGAACGATGATTCTG 1800
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      GGACCTCCTCAGCACCAGCTCAGCCTGATGGGCAAACCACTGCAGCAGCAAGTACGTAGC 1860
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      TTTGACTTTGTTAATGCCTTTGATGGAACCTGTCGAAGTTTTTTGGTCATGGCCTTGGGT 1920
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      TATCGTCAGCCAACAAGTGTCTCTACTGCAAGATTATGCCTGACGAGAGTTCAGTTTCGG 1980
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      TTTTCTCATGGTCTTACAATGTATACAAGCATCTCATACCAAGATCTCGGATCTTAATTT 2040
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      GTACAATACAGCCATTAATTTTTTTAGCTGGTCATCATTAGTCCATACCTAGATGTTGTA 2100
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      GAGTGAAAGATTGTTTCAGGGTGACAATAAGCCGATAATGTGAAGTGAGCGTGCTACGTT 2160
consensus_12771#1      ------------------------------------------------------------
                                                                                   

consensus_12771#0      GTTAACTGCAGAGTACTGCGCCTCTATGTTTTCTTCTTTTCCATTAAATTACTGTTCAT 2219
consensus_12771#1      -----------------------------------------------------------