cluster # 12786

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Oryza sativa
cluster # 12786 cluster # 12786 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12786#0 length = 1640 sequences # 9

consensus_12786#1 length = 426 sequences # 1
consensus_12786#2 length = 345 sequences # 1

consensusID : consensus_12786#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1640
fasta sequence

                              [GTACGCCCCCTCCCTCACTTTCCCCAACTCCCTCTCCAGTCTCCACTGTCACACTCCACCCTCTTGCCTCCCCGCGTCGGCGACCACCACCACCATGGCCGCCGCCTCTCCTCCTCCGCTCGCGCTCCTCACCCTCACCCTCTCCCTCACC-CTCTCCCTCGCCTCCGCCGGCCTCGTCCTGGACGACGGCTACACCGTCACCACCGCCGCCGACCTCAACCACCCGGGCGCCCCCGCCGCGCCCCACCCCTACGCGCTCCTCCCGCGCCCGCGCGCCGGGGACCTCGTCCTGCTCGACTCCGCGGCCTCCGCGCTCTACACCCTCGCCCTCCCGCTCTCCGGGGGCGCCGCCGCGCGGACCCTCGCGGGCGGTGGTGGCGGCCCCGCCGGGTTCGCCGACGGGGAGCCCCGCGACGCCGCCTTCGACCGCCCCCGCAGCCTCGCCGTCGACCACGCGGATAACGTCTACGTCGCCGACCGCATGAACGGCGCCGTCCGAAAGATCGCGCCCTCCGGTTTTACTACTACAATTGCTGGAGGGCGCTCAAAAGGGCCTGGTCGCAAGGATGGACCTGCACAGAATGCTACATTCTCTTCAGATTTTGAGCTTGTTTATGTCCCAAAAATGTGTGCTCTGTTAGTTACTGACAGAGGAAATCGTTTGATCAGGCAAATCAATCTAAAACAAGAAGATTGTGCACGTGAGACACAGCCAGGCTTGGGAACAACTTCGGTGTCAATTATTGCAGTGCTATGTGCACTGCTTGGTTCAGTTATTGGGTTCTCCATTCGGCATTTCTACCCTGCTCATGCAGGAAGTCTCCATCAACCGCTTTTTCAGGAGGATGCAGATGCAGTACAAGACAATCCAGAGGACGGCCGCTCTGATCAGCTTCTCCGACATCAGAAGCGTAGCTGC-TAACTCCACGTTTCACGCCCTCCTGCTGAAGCTAGTTAGAGTTTGTGTTGGCTATCTAAGTGTTGTGTTCCCTAGCGTTAGGTTAGAGAAACGAGCCCCTGTTAAGCCTTGTCCTTCTCTTCTTGATTTAGACTACCCTGTTGTTA-CTAGTACTGGTCCTGACAACAAGGCAGATGAATCTACTGAGCTAGTGGGGAATTTCAT-CGGCTTCGATGGAGATACCAGTTCAGAGGAGGATAATGTGCCTGCATCTTATGGCAAGGTGCCTGCTGGTGAATTGGTGGCGCTTCTAGATGGTCCAGAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTTATCGGGCTTTTCAGGTCAAGAGAATAATCATTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGAGGTTGCATGGAGAGAGTAATGTTCTCTAAGCTTGATTGCCTGTATGCACGCATTTGCTTGGGGTATTGTCTCCATGTTGCTATCTGCTGTAGTAGCGCCTAACTAAAAAACCTATCGTGTCAGTATATTCTGCTCTATCGAATGTAAGTACAATAACTAGAACTGATATGTGCTCGTCTTAAGTGGTGATGTCATGTATAAGTGTGATCAGGGTATGGTAAGC-TCATGTAATGATTGTTACTGCTGCTATTCTCGTGTCAAAGCTTTGTCATGCCTGTTAACGTATGGAATTTATATACTCTAAAAAA]

[+] EMBL AK101579             [GTACGCCCCCTCCCTCACTTTCCCCAACTCCCTCTCCAGTCTCCACTGTCACACTCCACCCTCTTGCCTCCCCGCGTCGGCGACCACCACCACCATGGCCGCCGCCTCTCCTCCTCCGCTCGCGCTCCTCACCCTCACCCTCTCCCTCACC CTCTCCCTCGCCTCCGCCGGCCTCGTCCTGGACGACGGCTACACCGTCACCACCGCCGCCGACCTCAACCACCCGGGCGCCCCCGCCGCGCCCCACCCCTACGCGCTCCTCCCGCGCCCGCGCGCCGGGGACCTCGTCCTGCTCGACTCCGCGGCCTCCGCGCTCTACACCCTCGCCCTCCCGCTCTCCGGGGGCGCCGCCGCGCGGACCCTCGCGGGCGGTGGTGGCGGCCCCGCCGGGTTCGCCGACGGGGAGCCCCGCGACGCCGCCTTCGACCGCCCCCGCAGCCTCGCCGTCGACCACGCGGATAACGTCTACGTCGCCGACCGCATGAACGGCGCCGTCCGAAAGATCGCGCCCTCCGGTTTTACTACTACAATTGCTGGAGGGCGCTCAAAAGGGCCTGGTCGCAAGGATGGACCTGCACAGAATGCTACATTCTCTTCAGATTTTGAGCTTGTTTATGTCCCAAAAATGTGTGCTCTGTTAGTTACTGACAGAGGAAATCGTTTGATCAGGCAAATCAATCTAAAACAAGAAGATTGTGCACGTGAGACACAGCCAGGCTTGGGAACAACTTCGGTGTCAATTATTGCAGTGCTATGTGCACTGCTTGGTTCAGTTATTGGGTTCTCCATTCGGCATTTCTACCCTGCTCATGCAGGAAGTCTCCATCAACCGCTTTTTCAGGAGGATGCAGATGCAGTACAAGACAATCCAGAGGACGGCCGCTCTGATCAGCTTCTCCGACATCAGAAGCGTAGCTGC TAACTCCACGTTTCACGCCCTCCTGCTGAAGCTAGTTAGAGTTTGTGTTGGCTATCTAAGTGTTGTGTTCCCTAGCGTTAGGTTAGAGAAACGAGCCCCTGTTAAGCCTTGTCCTTCTCTTCTTGATTTAGACTACCCTGTTGTTA CTAGTACTGGTCCTGACAACAAGGCAGATGAATCTACTGAGCTAGTGGGGAATTTCAT CGGCTTCGATGGAGATACCAGTTCAGAGGAGGATAATGTGCCTGCATCTTATGGCAAGGTGCCTGCTGGTGAATTGGTGGCGCTTCTAGATGGTCCAGAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTTATCGGGCTTTTCAGGTCAAGAGAATAATCATTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGAGGTTGCATGGAGAGAGTAATGTTCTCTAAGCTTGATTGCCTGTATGCACGCATTTGCTTGGGGTATTGTCTCCATGTTGCTATCTGCTGTAGTAGCGCCTAACTAAAAAACCTATCGTGTCAGTATATTCTGCTCTATCGAATGTAAGTACAATAACTAGAACTGATATGTGCTCGTCTTAAGTGGTGATGTCATGTATAAGTGTGATCAGGGTATGGTAAGC TCATGTAATGATTGTTACTGCTGCTATTCTCGTGTCAAAGCTTTGTCATGCCTGTTAACGTATGGAATT                ]
[+] EMBL AK101578             [GTACGCCCCCTCCCTCACTTTCCCCAACTCCCTCTCCAGTCTCCACTGTCACACTCCACCCTCTTGCCTCCCCGCGTCGGCGACCACCACCACCATGGCCGCCGCCTCTCCTCCTCCGCTCGCGCTCCTCACCCTCACCCTCTCCCTCACC CTCTCCCTCGCCTCCGCCGGCCTCGTCCTGGACGACGGCTACACCGTCACCACCGCCGCCGACCTCAACCACCCGGGCGCCCCCGCCGCGCCCCACCCCTACGCGCTCCTCCCGCGCCCGCGCGCCGGGGACCTCGTCCTGCTCGACTCCGCGGCCTCCGCGCTCTACACCCTCGCCCTCCCGCTCTCCGGGGGCGCCGCCGCGCGGACCCTCGCGGGCGGTGGTGGCGGCCCCGCCGGGTTCGCCGACGGGGAGCCCCGCGACGCCGCCTTCGACCGCCCCCGCAGCCTCGCCGTCGACCACGCGGATAACGTCTACGTCGCCGACCGCATGAACGGCGCCGTCCGAAAGATCGCGCCCTCCGGTTTTACTACTACAATTGCTGGAGGGCGCTCAAAAGGGCCTGGTCGCAAGGATGGACCTGCACAGAATGCTACATTCTCTTCAGATTTTGAGCTTGTTTATGTCCCAAAAATGTGTGCTCTGTTAGTTACTGACAGAGGAAATCGTTTGATCAGGCAAATCAATCTAAAACAAGAAGATTGTGCACGTGAGACACAGCCAGGCTTGGGAACAACTTCGGTGTCAATTATTGCAGTGCTATGTGCACTGCTTGGTTCAGTTATTGGGTTCTCCATTCGGCATTTCTACCCTGCTCATGCAGGAAGTCTCCATCAACCGCTTTTTCAGGAGGATGCAGATGCAGTACAAGACAATCCAGAGGACGGCCGCTCTGATCAGCTTCTCCGACATCAGAAGCGTAGCTGC TAACTCCACGTTTCACGCCCTCCTGCTGAAGCTAGTTAGAGTTTGTGTTGGCTATCTAAGTGTTGTGTTCCCTAGCGTTAGGTTAGAGAAACGAGCCCCTGTTAAGCCTTGTCCTTCTCTTCTTGATTTAGACTACCCTGTTGTTA CTAGTACTGGTCCTGACAACAAGGCAGATGAATCTACTGAGCTAGTGGGGAATTTCAT CGGCTTCGATGGAGATACCAGTTCAGAGGAGGATAATGTGCCTGCATCTTATGGCAAGGTGCCTGCTGGTGAATTGGTGGCGCTTCTAGATGGTCCAGAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTTATCGGGCTTTTCAGGTCAAGAGAATAATCATTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGAGGTTGCATGGAGAGAGTAATGTTCTCTAAGCTTGATTGCCTGTATGCACGCATTTGCTTGGGGTATTGTCTCCATGTTGCTATCTGCTGTAGTAGCGCCTAACTAAAAAACCTATCGTGTCAGTATATTCTGCTCTATCGAATGTAAGTACAATAACTAGAACTGATATGTGCTCGTCTTAAGTGGTGATGTCATGTATAAGTGTGATCAGGGTATGGTAAGC TCATGTAATGATTGTTACTGCTGCTATTCTCGTGTCAAAGCTTTGTCATGCCTGTTAACGTATGGAATT                ]
[+] EMBL C73580               [                               CTCTCCAGTCTCCACTGTCACACTCCACCCTCTTGCCTCCCCGCGTCGGCGACCACCACCACCATGGCCGCCGCCTCTCCTCCTCCGCTCGCGCTCCTCACCCTCACCCTCTCCCTCACCNNTCTCCCTCGCCTCCGCCGGCCTCGTCCTGGACGACGGCTACACCGTCACCACCGCCGCCGACCTCAACCACCCGGGCGCNCCCGCNGCGCCCCAACCCTACGCGCTCCTTCCGCGNCCG GCGCNGGGGACCTCGTCCTGCTCGANTCCGCGGGCTNCG GCTCTA AANCTCGCCCTTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB675336             [                                                                                                                               CTCACCCTCACCCTCTCCCTCACC CTCTCCCTCGCCTCCGCCGGCCTCGTCCTGGACGACGGCTACACCGTCACCACCGCCGCCGACCTCAACCACCCGGGCGCCCCCGCCGCGCCCCACCCCTACGCGCTCCTCCCGCGCCCGCGCGCCGGGGACCTCGTCCTGCTCGACTCCGCGGCCTCCGCGCTCTACACCCTCGCCCTCCCGCTCTCCGGGGGCGCCGCCGCGCGGACCCTCGCGGGCGGTGGTGGCGGCCCCGCCGGGTTCGCCGACGGGGAGCCCCGCGACGCCGCCTTCGACCGCCCCCGCAGCCTCGCCGTCGACCACGCGGATAACGTCTACGTCGCCGACCGCATGAACGGCGCCGTCCGAAAGATCGCGCCCTCCGGTTTTACTACTACAATTGCTGGAGGGCGCTCAAAAGGGCCTGGTCGCAAGGATGGACCTGCACAGAATGCTACATTCTCTTCAGATTTTGAGCTTGTTTATGTCCCAAAAATGTGTGCTCTGTTAGTTACTGACAGAGGAAATCGTTTGATCAGGCAAATCAATCTAAAACAAGAAGATTGTGCACGTGAGACACAGCCAGGCTTGGGAACAACTTCGGTGTCAATTATTGCAGTGCTATGTGCACTGCTTGGTTCAGTTATTGGGTTCTCCATTCGGCATTTCTACCCTGCTCAT    GAAGTCTCCATCAACCGCTTTTTCAAGAGGATGCAGATGCAGTACAAGACAATCCAGAGGACGGCCGCTCTGATCAGCTTCTCCGACATCAGAAGCGTAACTGC TA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C96785               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCCCTCCGGTTTTACTACTACAATTGCTGGAGGGCGCTCAAAAGGGCCTGGTCGCAAGGATGGACCTGCACAGAATGCTACATTCTCTTCAGATTTTGAGCTTGTTTATGTCCCAAAAATGTGTGCTCTGTTAGTTACTGACAGAGGAAATCGTTTGATCAGGCAAATCAATCTAAAACAAGAAGATTGTGCACGTGAGACACAGCCAGGCTTGGGAACAACTTCGGTGTCAATTATTGCAGTGCTATGTGCACTGCTTGGTTCAGTTATTGGGTTCTCCATTCGGCATTTCTACCCTGCTCATGCAGGAAGTCTCCATCAACCGCTTTTTCAGGAGGATGCAGATGCAGTACAAGACAATCCAGAGGACGGCCGCTCTGATCAGCTTCTCCGACATCAGAAGCGTANTGGCTTAACTCCACGTTTCACGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB675337             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGTACAAGACAATCCAGAGGACGGCCGCTCTGATCAGCTTCTCGGACATCAGAAGCGTAGCTGC TAACTCCACGTTTCACGCCCTCCTGTTGAAGCTAGTTAGAGTTTGTGTTGGCTATCTAAGTGTTGTGTTCCCTAGCGTTAGGTTAGAGAAACGAGCCCCTGTTAAGCCTTGTCCTTCTCTTCTTGATTTAGACTACCCTGTTGTTC CTAGTACTGGTCCCGACAACAAGGCAGATGAATCTATTGAGCTACTGGGGAATTTCAT CGGCTTTGATGGAGATACCAGTTCAGAGGAGGATAATGTGCCTGCATCTTATGGCAAGGTGCCTGCTGGTGAATTGGTGGCGCTTCTAGATGGTCCAGAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTTATCGGGCTTTTCAGGTCAAGAGAATAATCATTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGAGGTTGCATGGAGAGAGTAATGTTTTGTAAGCTTGATTGCCTGTATGCACGCATTTGCTTGGGGTATTGTCTCCACGCTGCTATTTGCTGTAGTAGCGCCTAACTAAAAAACCTATCGTGTCAGTATATTCCGCTCTATCGAATGTAAGTTCAATCCCTAGAACTGATATGTGCTCCTCTTAAGTGGTGATGTCATCTATAAGTGTGATCAGGGTATGGTAAGCGTCATGTAATGATTGTTAC                                                                   ]
[+] EMBL AA750620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGTACAAGACAATCCAGAGGACGGCCGCTCTGATCAGCTTCTCCGACATCAGAAGCGTAG TGC TAACTCCACGTTTCACGCCCTCCTGCTGAAGCTAGTTAGAGTTTGTGTTGGCTATCTAAGTGTTGTGTTCCCTAGCGTTAGGTTAGAGAAACGAGCCCCTGTTAAGCCTTGTCCTTCTCTTCTTGATTTAGACTACCCTGTTGTTA CTAGTACTGGTCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C96786               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       aTTAGACTCCCCTGTTGTTACCTAGTACTGGTCCTGACAACAAGGCAGATGAATCTACTGAGCTANTGGGGAATTTCATCCGGCTTCGATGGAGATACCAGTTCAGAGGAGGATAATGTGCCTGCATCTTATGGCAAGGTNCCTGCTGGTGAATTGGTGGCGCTTCTAGATGGTCCAGAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTTATCGGGCTTTTCAGGTCAAGAGAATAATCATTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGAGGTTGCATGGAGAGAGTAATGTTCTCTAAGCTTGATTGCCTGTATGCACGCATTTGCTTGGGGTATTGTCTCCATGTTGCTATCTGCTGTAGTAGCGCCTAACTAAAAAACCTATCGTGTCAGTATATTCTGCTCTATCGAATGTAAGTACAATAACTAGAACTGATATGTGCTCGTCTTAAGTGGTGATGTCATGTATAAGTGTGATCAGGGTATGGTAAGC TCATGTAATGATTGTTACTGCTGCTATTCTCGTGTCAAAGCTTTGTCATGCCTGTTAACGTATGGAATTTATATACTCTAAAAAA]
[-] EMBL CA882810             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACAACAAGGCAGATGAATCTACTGAGCTAGTGGGGAATTTCAT CGGCTTCGATGGAGATACCAGTTCAGAGGAGGATAATGTGCCTGCATCTTATGGCAAGGTGCCTGCTGGTGAATTGGTGGCGCTTCTAGATGGTCCAGAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTTATCGGGCTTTTCAGGTCAAGAGAATAATCATTGCCCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGAGGTTGCATGGAGAGAGTAATGTTCTCTAAGCTTGATTGCCTGTATGCACGCATTTGCTTGGGGTATTGTCTCCATGTTGCTATCTGCTGTAGTAGCGCCTAACTAAAAAACCTATCGTGTCAGTATATTCTGCTCTATCGA                                                                                                                                                                        ]




>consensus_12786#0
GTACGCCCCCTCCCTCACTTTCCCCAACTCCCTCTCCAGTCTCCACTGTCACACTCCACC
CTCTTGCCTCCCCGCGTCGGCGACCACCACCACCATGGCCGCCGCCTCTCCTCCTCCGCT
CGCGCTCCTCACCCTCACCCTCTCCCTCACCCTCTCCCTCGCCTCCGCCGGCCTCGTCCT
GGACGACGGCTACACCGTCACCACCGCCGCCGACCTCAACCACCCGGGCGCCCCCGCCGC
GCCCCACCCCTACGCGCTCCTCCCGCGCCCGCGCGCCGGGGACCTCGTCCTGCTCGACTC
CGCGGCCTCCGCGCTCTACACCCTCGCCCTCCCGCTCTCCGGGGGCGCCGCCGCGCGGAC
CCTCGCGGGCGGTGGTGGCGGCCCCGCCGGGTTCGCCGACGGGGAGCCCCGCGACGCCGC
CTTCGACCGCCCCCGCAGCCTCGCCGTCGACCACGCGGATAACGTCTACGTCGCCGACCG
CATGAACGGCGCCGTCCGAAAGATCGCGCCCTCCGGTTTTACTACTACAATTGCTGGAGG
GCGCTCAAAAGGGCCTGGTCGCAAGGATGGACCTGCACAGAATGCTACATTCTCTTCAGA
TTTTGAGCTTGTTTATGTCCCAAAAATGTGTGCTCTGTTAGTTACTGACAGAGGAAATCG
TTTGATCAGGCAAATCAATCTAAAACAAGAAGATTGTGCACGTGAGACACAGCCAGGCTT
GGGAACAACTTCGGTGTCAATTATTGCAGTGCTATGTGCACTGCTTGGTTCAGTTATTGG
GTTCTCCATTCGGCATTTCTACCCTGCTCATGCAGGAAGTCTCCATCAACCGCTTTTTCA
GGAGGATGCAGATGCAGTACAAGACAATCCAGAGGACGGCCGCTCTGATCAGCTTCTCCG
ACATCAGAAGCGTAGCTGCTAACTCCACGTTTCACGCCCTCCTGCTGAAGCTAGTTAGAG
TTTGTGTTGGCTATCTAAGTGTTGTGTTCCCTAGCGTTAGGTTAGAGAAACGAGCCCCTG
TTAAGCCTTGTCCTTCTCTTCTTGATTTAGACTACCCTGTTGTTACTAGTACTGGTCCTG
ACAACAAGGCAGATGAATCTACTGAGCTAGTGGGGAATTTCATCGGCTTCGATGGAGATA
CCAGTTCAGAGGAGGATAATGTGCCTGCATCTTATGGCAAGGTGCCTGCTGGTGAATTGG
TGGCGCTTCTAGATGGTCCAGAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACT
TATCGGGCTTTTCAGGTCAAGAGAATAATCATTGCTCAGCTGTCAAATGTTCTGGTATAA
GCAGGAGGAGGAGGTTGCATGGAGAGAGTAATGTTCTCTAAGCTTGATTGCCTGTATGCA
CGCATTTGCTTGGGGTATTGTCTCCATGTTGCTATCTGCTGTAGTAGCGCCTAACTAAAA
AACCTATCGTGTCAGTATATTCTGCTCTATCGAATGTAAGTACAATAACTAGAACTGATA
TGTGCTCGTCTTAAGTGGTGATGTCATGTATAAGTGTGATCAGGGTATGGTAAGCTCATG
TAATGATTGTTACTGCTGCTATTCTCGTGTCAAAGCTTTGTCATGCCTGTTAACGTATGG
AATTTATATACTCTAAAAAA

consensusID : consensus_12786#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 426
fasta sequence

                              [GCCGCTATATCGGACACGTCGTAATGTCGTATCCTCTAGCGTTATGGTATAAGAGGATAAGCAAGCCCACTGTTGAGAGGCCTTGGGTACCTTACATCTTGCCTCGTATTATAGTCACTACCCATTGTATCGTTACTACAGTGACTCGGTCCTGACAACAAGGCAGATGAATCTACTGAGCTAGTGGGGAATTTCATCGCGCTATCGATGGAGATACCAGTTCAGAGGAGGATAATGTGCCTGCATCTTATGGCAAGGTGCCTGCTGGTGAATATGGTGGCGCTTCTAGATGGTTCCTTTTAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTATATCGGGCTTTATCAGGTCAAGAGAATAATCATCTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGAGGTGCATGGAG]

[+] EMBL AU225348             [GCCGCTATATCGGACACGTCGTAATGTCGTATCCTCTAGCGTTATGGTATAAGAGGATAAGCAAGCCCACTGTTGAGAGGCCTTGGGTACCTTACATCTTGCCTCGTATTATAGTCACTACCCATTGTATCGTTACTACAGTGACTCGGTCCTGACAACAAGGCAGATGAATCTACTGAGCTAGTGGGGAATTTCATCGCGCTATCGATGGAGATACCAGTTCAGAGGAGGATAATGTGCCTGCATCTTATGGCAAGGTGCCTGCTGGTGAATATGGTGGCGCTTCTAGATGGTTCCTTTTAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTATATCGGGCTTTATCAGGTCAAGAGAATAATCATCTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGAGGTGCATGGAG]




>consensus_12786#1
GCCGCTATATCGGACACGTCGTAATGTCGTATCCTCTAGCGTTATGGTATAAGAGGATAA
GCAAGCCCACTGTTGAGAGGCCTTGGGTACCTTACATCTTGCCTCGTATTATAGTCACTA
CCCATTGTATCGTTACTACAGTGACTCGGTCCTGACAACAAGGCAGATGAATCTACTGAG
CTAGTGGGGAATTTCATCGCGCTATCGATGGAGATACCAGTTCAGAGGAGGATAATGTGC
CTGCATCTTATGGCAAGGTGCCTGCTGGTGAATATGGTGGCGCTTCTAGATGGTTCCTTT
TAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTATATCGGGCTTTATCAGGTC
AAGAGAATAATCATCTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGAGGTGC
ATGGAG

consensusID : consensus_12786#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 345
fasta sequence

                              [CTTCTAGTACTGGTCCAGAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTTATCGGGCTTTTCAGGTCAAGAGAATAATCATTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGTTGCGTGGAGAGAGTAATGTTCTCTAAGCTTGATTGCCTGTATGCACGCATTTGCTTGGGGTATTGTCTCCATGTTGCTATCAGCTGTAGTAGTGCCTAACTAAAAAACCTATCGTGTCAATATATTCTGCTCTATCGAATGTAAGTACAATAACTAGATCCTGCTATTCTCGTGTCAAAGCTTTGTAATGCTTGTTAAGGCCTACCAAAAAAAAAA]

[+] EMBL BI810499             [CTTCTAGTACTGGTCCAGAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTTATCGGGCTTTTCAGGTCAAGAGAATAATCATTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGTTGCGTGGAGAGAGTAATGTTCTCTAAGCTTGATTGCCTGTATGCACGCATTTGCTTGGGGTATTGTCTCCATGTTGCTATCAGCTGTAGTAGTGCCTAACTAAAAAACCTATCGTGTCAATATATTCTGCTCTATCGAATGTAAGTACAATAACTAGATCCTGCTATTCTCGTGTCAAAGCTTTGTAATGCTTGTTAAGGCCTACCAAAAAAAAAA]




>consensus_12786#2
CTTCTAGTACTGGTCCAGAACTCAGCAATAAGATAGATGACATGATCGAGGCCAACTTAT
CGGGCTTTTCAGGTCAAGAGAATAATCATTGCTCAGCTGTCAAATGTTCTGGTATAAGCA
GGAGGAGGTTGCGTGGAGAGAGTAATGTTCTCTAAGCTTGATTGCCTGTATGCACGCATT
TGCTTGGGGTATTGTCTCCATGTTGCTATCAGCTGTAGTAGTGCCTAACTAAAAAACCTA
TCGTGTCAATATATTCTGCTCTATCGAATGTAAGTACAATAACTAGATCCTGCTATTCTC
GTGTCAAAGCTTTGTAATGCTTGTTAAGGCCTACCAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12786#0      GTACGCCCCCTCCCTCACTTTCCCCAACTCCCTCTCCAGTCTCCACTGTCACACTCCACC 60
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      CTCTTGCCTCCCCGCGTCGGCGACCACCACCACCATGGCCGCCGCCTCTCCTCCTCCGCT 120
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      CGCGCTCCTCACCCTCACCCTCTCCCTCACCCTCTCCCTCGCCTCCGCCGGCCTCGTCCT 180
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      GGACGACGGCTACACCGTCACCACCGCCGCCGACCTCAACCACCCGGGCGCCCCCGCCGC 240
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      GCCCCACCCCTACGCGCTCCTCCCGCGCCCGCGCGCCGGGGACCTCGTCCTGCTCGACTC 300
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      CGCGGCCTCCGCGCTCTACACCCTCGCCCTCCCGCTCTCCGGGGGCGCCGCCGCGCGGAC 360
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      CCTCGCGGGCGGTGGTGGCGGCCCCGCCGGGTTCGCCGACGGGGAGCCCCGCGACGCCGC 420
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      CTTCGACCGCCCCCGCAGCCTCGCCGTCGACCACGCGGATAACGTCTACGTCGCCGACCG 480
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      CATGAACGGCGCCGTCCGAAAGATCGCGCCCTCCGGTTTTACTACTACAATTGCTGGAGG 540
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      GCGCTCAAAAGGGCCTGGTCGCAAGGATGGACCTGCACAGAATGCTACATTCTCTTCAGA 600
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      TTTTGAGCTTGTTTATGTCCCAAAAATGTGTGCTCTGTTAGTTACTGACAGAGGAAATCG 660
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      TTTGATCAGGCAAATCAATCTAAAACAAGAAGATTGTGCACGTGAGACACAGCCAGGCTT 720
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      GGGAACAACTTCGGTGTCAATTATTGCAGTGCTATGTGCACTGCTTGGTTCAGTTATTGG 780
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      GTTCTCCATTCGGCATTTCTACCCTGCTCATGCAGGAAGTCTCCATCAACCGCTTTTTCA 840
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      GGAGGATGCAGATGCAGTACAAGACAATCCAGAGGACGGCCGCTCTGATCAGCTTCTCCG 900
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      ACATCAGAAGCGTAGCTGCTAACTCCACGTTTCACGCCCTCCTGCTGAAGCTAGTTAGAG 960
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      TTTGTGTTGGCTATCTAAGTGTTGTGTTCCCTAGCGTTAGGTTAGAGAAACGAGCCCCTG 1020
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      TTAAGCCTTGTCCTTCTCTTCTTGATTTAGACTACCCTGTTGTTACTAGTACTGGTCCTG 1080
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      ACAACAAGGCAGATGAATCTACTGAGCTAGTGGGGAATTTCATCGGCTTCGATGGAGATA 1140
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ------------------------------------------------------------
                                                                                   

consensus_12786#0      CCAGTTCAGAGGAGGATAATGTGCCTGCATCTTATGGCAAGGTGCCTGCTGGTGAATTGG 1200
consensus_12786#2      ------------------------------------------------------------
consensus_12786#1      ---------------------------------------------------GCCGCTATA 9
                                                                                   

consensus_12786#0      TGGCGCTTCTAGA--TGGTCCAGAACTCAGCAATAAGATAGATGAC-ATGATCGAGGCCA 1257
consensus_12786#2      -----CTTCTAGTACTGGTCCAGAACTCAGCAATAAGATAGATGAC-ATGATCGAGGCCA 54
consensus_12786#1      TCGGACACGTCGTAATGTCGTATCCTCTAGCGTTATGGTATAAGAGGATAAGCAAGCCCA 69
                            *   * *   **    *      ***  ** * ** * **  ** * * ** ***

consensus_12786#0      AC-TTATCGGGCTTTTCAGGTCAAGAGAATAA--TCATTGCTCAGCTGTCAAATGTTCTG 1314
consensus_12786#2      AC-TTATCGGGCTTTTCAGGTCAAGAGAATAA--TCATTGCTCAGCTGTCAAATGTTCTG 111
consensus_12786#1      CTGTTGAGAGGCCTTGGGTACCTTACATCTTGCCTCGTATTATAGTCACTACCCATTGTA 129
                          **    *** **      *       *    ** *     **     *    ** * 

consensus_12786#0      GTATAAGCAGGAGGAGGAGGTTGCATGGAGAGAGTA-ATG--TTCTCTAAGCT--TGATT 1369
consensus_12786#2      GTATAAGCAGGAGGA---GGTTGCGTGGAGAGAGTA-ATG--TTCTCTAAGCT--TGATT 163
consensus_12786#1      TCGTTACTACAGTGACTCGGTCCTGACAACAAGGCAGATGAATCTACTGAGCTAGTGGGG 189
                          * *  *    **   ***       * *  * * ***  *   ** ****  **   

consensus_12786#0      GCCTGTATGCACGCATTTGCTTGGGGTATTGTCTCCATGTTGCTATCTGCTGTAGTAGCG 1429
consensus_12786#2      GCCTGTATGCACGCATTTGCTTGGGGTATTGTCTCCATGTTGCTATCAGCTGTAGTAGTG 223
consensus_12786#1      AATTTCAT-CGCGCTATCGATGGAGATACCAGTTCAGAGGAGG-ATAATGTGCCTGCATC 247
                          *  ** * ***  * * * * * **     **   *  *  **    **        

consensus_12786#0      CCTAACTAAAAAACCTATCGTGTCAGTATATTCTGCTCTATCGAATG-------TAAGTA 1482
consensus_12786#2      CCTAACTAAAAAACCTATCGTGTCAATATATTCTGCTCTATCGAATG-------TAAGTA 276
consensus_12786#1      TTATGGCAAGGTGCCTGCTG-GTGAATATGGTG-GCGCTTCTAGATGGTTCCTTTTAACT 305
                              **    ***   * ** * ***  *  ** **     ***       * *   

consensus_12786#0      CAATAACTAGAACTGATATGTGCTCGTCTTAAGTGGTGATGTCATGTATAAGTGTGATCA 1542
consensus_12786#2      CAATAACTAGATCCTGC-TATTCTCGTGTCAAA--GCTTTGTAATGCTTGTTAAGGCCTA 333
consensus_12786#1      CAGCAATAAGATAGATGACATGATCGAGGCCAA---CTATATCGGGCTTTATCAGGTCAA 362
                       **  **  ***         *  ***     *       * *   *  *      *   *

consensus_12786#0      GGGTATGGTAAGCTCATGTAATGATTGTTACTGCTGCTATTCTCGTGTCAAAGCTTTGTC 1602
consensus_12786#2      CCAAAAAAAAAA------------------------------------------------ 345
consensus_12786#1      GAGAATAATCATCTGCTCAGCTGTCAAATGTTCTGGTATAAGCAGGAGGAGGAGGTGCAT 422
                           *     *                                                 

consensus_12786#0      ATGCCTGTTAACGTATGGAATTTATATACTCTAAAAAA 1640
consensus_12786#2      --------------------------------------
consensus_12786#1      GGAG---------------------------------- 426