cluster # 1279

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Oryza sativa
cluster # 1279 cluster # 1279 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1279#0 length = 559 sequences # 2

consensusID : consensus_1279#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 559
fasta sequence

                              [GCAGAATGGAGGCTTCAAAGGAAAATAATCAAGTTTGGTGTGTTTTGGTCGTTGCCTACTGATTTGGAAAGAATGATACTTTATAAGGAGGCTTGTGTATTAGACTCTGAAAGTGGGCCATATAATGTCATAGCAGAAGCTATAAGTGATTGGAATCTTGATAATAAGCTTTTTAGCTTGATATCCGTCAGTGAAATTAGAAACCATGAAGGTACCACAAAGCTTAAGGACATGCTCATACAAAAAAATAGTCTTCCTATTAGAGGTGAGCTATACAATATTGCCTGTGTGGATGACGTGCTTAACAACATTGTTTCAAAAGGGCAATCAATGCTTCACCTTGTTGATAATATACTAGAAAGATTTATGCTGGCACATGCGTACTCATCGTTAACTCAACAGCAACTTTTTGAAGCTGTTACAAACATGGGTTTGAAGTGTCCCCAGGAAGACGCAAAATGGTGGCACAAAATTTACTTCAGGCTTGAAGTTGTTCTGCATTGCAAGNNNNCATTTCCATCTGANNNNNTGTTACCTGCNNNNNNNNATANNNTCGTNG]

[+] EMBL CF196592             [GCAGAATGGAGGCTTCAAAGGAAAATAATCAAGTTTGGTGTGTTTTGGTCGTTGCCTACTGATTTGGAAAGAATGATACTTTATAAGGAGGCTTGTGTATTAGACTCTGAAAGTGGGCCATATAATGTCATAGCAGAAGCTATAAGTGATTGGAATCTTGATAATAAGCTTTTTAGCTTGATATCCGTCAGTGAAATTAGAAACCATGAAGGTACCACAAAGCTTAAGGACATGCTCATACAAAAAAATAGTCTTCCTATTAGAGGTGAGCTATACAATATTGCCTGTGTGGATGACGTGCTTAACAACATTGTTTCAAAAGGGCAATCAATGCTTCACCTTGTTGATAATATACTAGAAAGATTTATGCTGGCACATGCGTACTCATCGTTAACTCAACAGCAACTTTTTGAAGCTGTTACAAACATGGGTTTGAAGTGTCCCCAGGAAGACGCAAAATGGTGGCACAAAATTTACTTCAGGCTTGAAGTTGTTCTGCATTGCAAGNNNNCATTTCCATCTGANNNNNTGTTACCTGCNNNNNNNNATANNNTCGTNG]
[+] EMBL CF323237             [                       AATAATCAAGTTTGGTGTGTTTTGGTCGTTGCCTACTGATTTGGAAAGAATGATACTTTATAAGGAGGCTTGTGTATTAGACTCTGAAAGTGGGCCATATAATGTCATAGCAGAAGCTATAAGTGATTGGAATCTTGATAATAAGCTTTTTAGCTTGATATCCGTCAGTGAAATTAGAAACCATGAAGGTACCACAAAGCTTAAGGAC                                                                                                                                                                                                                                                                                                                                        ]




>consensus_1279#0
GCAGAATGGAGGCTTCAAAGGAAAATAATCAAGTTTGGTGTGTTTTGGTCGTTGCCTACT
GATTTGGAAAGAATGATACTTTATAAGGAGGCTTGTGTATTAGACTCTGAAAGTGGGCCA
TATAATGTCATAGCAGAAGCTATAAGTGATTGGAATCTTGATAATAAGCTTTTTAGCTTG
ATATCCGTCAGTGAAATTAGAAACCATGAAGGTACCACAAAGCTTAAGGACATGCTCATA
CAAAAAAATAGTCTTCCTATTAGAGGTGAGCTATACAATATTGCCTGTGTGGATGACGTG
CTTAACAACATTGTTTCAAAAGGGCAATCAATGCTTCACCTTGTTGATAATATACTAGAA
AGATTTATGCTGGCACATGCGTACTCATCGTTAACTCAACAGCAACTTTTTGAAGCTGTT
ACAAACATGGGTTTGAAGTGTCCCCAGGAAGACGCAAAATGGTGGCACAAAATTTACTTC
AGGCTTGAAGTTGTTCTGCATTGCAAGNNNNCATTTCCATCTGANNNNNTGTTACCTGCN
NNNNNNNATANNNTCGTNG

clustalw multiple alignements is not computed in this case