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Oryza sativa
cluster # 12790 cluster # 12790       Sequences # 11       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12790#0 length = 1760 sequences # 1  
consensus_12790#1 length = 1305 sequences # 7  
consensus_12790#2 length = 728 sequences # 1  
consensus_12790#3 length = 703 sequences # 1  
consensus_12790#4 length = 667 sequences # 1  

consensusID : consensus_12790#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1760
fasta sequence
                              [GAAATGAAAAGATTGATTGGTTGCTGTAGGTGTTTCTGTTTGCTACAGTGAGAATGCCTGTCAAAGAATTCACTGTCAGATTATACATGTTCAGAAAGCTCTGTTACAAATAGAAAAAAAAACAGCTTTTAGGGGAAAAAAGATGATGCTGAGTTTCTTTTCTTTTTTCTGTTTTGTTTTCACAAACTGTCATGAACTTTATTAAAAGATAGGGGGAAATGAAAAGATTGATTGGTTGCTGTAGATGTTTCTGTTTGCTACAGTGAGAATACCTGTCTCACTGTCAGATTATACATGTTTAGAAAGCTCTGTTACAAATAGAAAAAAAAAATCAGCTTTTAGGGGAAAAAATTAGGCTTTTTTTATTGTCATGTTGCTACCTCCAGTGAGCTCATCATCATCTGTTGTGTCATCATATGCGTGTTGCCGTCACCTACCATGGCAATTGGCAAAGCCTGAATTTTGTAACAATATGGTCTCTAACTGTTCGTTTTCAGGCTAACTCGATGCTTCTCTCAACATTCTTTCCTGATAAACTAGCTGCAAGTTGCCAGGGCTCTAGTTTTAGTTGGATGACCCTACAAAAAGTTTAGTCTTCTTTTGATCCAGTCCATAGTTGTTCAGCTGGCTCCATCAGATTACTGAGCTAGATTAATGTCATAAACATTCCCTCCAAAAGGATTTGACTGTCTTATCGTGGTTGTTTACTCCAAGTCGACACTTAAAACATTCAGGCTTCCATGATTGCTAACTCATCAAGCAACTATATAACTTGCCAACAATGATTTCCTCATGCAACTTGCTGCAGAGTCTGTTATGTTGGTTGCATCAGCATTATCCATCGTGCTAATAAGTTAATGAAATTTGAAGTCTTCTTGTCCTTAACCACTACATATGACCTGAAAATGATTTGATTCTCTACAGAATAATGTTCAGTTACAGTTATTACTTATTACAATTTTAACCTTTCATAGATCATTTGCACTTAATACCATGTTAAACATGAACATCACCTAATTACACGAAAACAAAATACAGGAGGACTGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAAACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGAAAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATCTGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTTGTCATTGCAGATGAATAAAGATTTCAGAGACAGGCA]

[+] EMBL AK105596             [GAAATGAAAAGATTGATTGGTTGCTGTAGGTGTTTCTGTTTGCTACAGTGAGAATGCCTGTCAAAGAATTCACTGTCAGATTATACATGTTCAGAAAGCTCTGTTACAAATAGAAAAAAAAACAGCTTTTAGGGGAAAAAAGATGATGCTGAGTTTCTTTTCTTTTTTCTGTTTTGTTTTCACAAACTGTCATGAACTTTATTAAAAGATAGGGGGAAATGAAAAGATTGATTGGTTGCTGTAGATGTTTCTGTTTGCTACAGTGAGAATACCTGTCTCACTGTCAGATTATACATGTTTAGAAAGCTCTGTTACAAATAGAAAAAAAAAATCAGCTTTTAGGGGAAAAAATTAGGCTTTTTTTATTGTCATGTTGCTACCTCCAGTGAGCTCATCATCATCTGTTGTGTCATCATATGCGTGTTGCCGTCACCTACCATGGCAATTGGCAAAGCCTGAATTTTGTAACAATATGGTCTCTAACTGTTCGTTTTCAGGCTAACTCGATGCTTCTCTCAACATTCTTTCCTGATAAACTAGCTGCAAGTTGCCAGGGCTCTAGTTTTAGTTGGATGACCCTACAAAAAGTTTAGTCTTCTTTTGATCCAGTCCATAGTTGTTCAGCTGGCTCCATCAGATTACTGAGCTAGATTAATGTCATAAACATTCCCTCCAAAAGGATTTGACTGTCTTATCGTGGTTGTTTACTCCAAGTCGACACTTAAAACATTCAGGCTTCCATGATTGCTAACTCATCAAGCAACTATATAACTTGCCAACAATGATTTCCTCATGCAACTTGCTGCAGAGTCTGTTATGTTGGTTGCATCAGCATTATCCATCGTGCTAATAAGTTAATGAAATTTGAAGTCTTCTTGTCCTTAACCACTACATATGACCTGAAAATGATTTGATTCTCTACAGAATAATGTTCAGTTACAGTTATTACTTATTACAATTTTAACCTTTCATAGATCATTTGCACTTAATACCATGTTAAACATGAACATCACCTAATTACACGAAAACAAAATACAGGAGGACTGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAAACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGAAAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATCTGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTTGTCATTGCAGATGAATAAAGATTTCAGAGACAGGCA]


>consensus_12790#0 GAAATGAAAAGATTGATTGGTTGCTGTAGGTGTTTCTGTTTGCTACAGTGAGAATGCCTG TCAAAGAATTCACTGTCAGATTATACATGTTCAGAAAGCTCTGTTACAAATAGAAAAAAA AACAGCTTTTAGGGGAAAAAAGATGATGCTGAGTTTCTTTTCTTTTTTCTGTTTTGTTTT CACAAACTGTCATGAACTTTATTAAAAGATAGGGGGAAATGAAAAGATTGATTGGTTGCT GTAGATGTTTCTGTTTGCTACAGTGAGAATACCTGTCTCACTGTCAGATTATACATGTTT AGAAAGCTCTGTTACAAATAGAAAAAAAAAATCAGCTTTTAGGGGAAAAAATTAGGCTTT TTTTATTGTCATGTTGCTACCTCCAGTGAGCTCATCATCATCTGTTGTGTCATCATATGC GTGTTGCCGTCACCTACCATGGCAATTGGCAAAGCCTGAATTTTGTAACAATATGGTCTC TAACTGTTCGTTTTCAGGCTAACTCGATGCTTCTCTCAACATTCTTTCCTGATAAACTAG CTGCAAGTTGCCAGGGCTCTAGTTTTAGTTGGATGACCCTACAAAAAGTTTAGTCTTCTT TTGATCCAGTCCATAGTTGTTCAGCTGGCTCCATCAGATTACTGAGCTAGATTAATGTCA TAAACATTCCCTCCAAAAGGATTTGACTGTCTTATCGTGGTTGTTTACTCCAAGTCGACA CTTAAAACATTCAGGCTTCCATGATTGCTAACTCATCAAGCAACTATATAACTTGCCAAC AATGATTTCCTCATGCAACTTGCTGCAGAGTCTGTTATGTTGGTTGCATCAGCATTATCC ATCGTGCTAATAAGTTAATGAAATTTGAAGTCTTCTTGTCCTTAACCACTACATATGACC TGAAAATGATTTGATTCTCTACAGAATAATGTTCAGTTACAGTTATTACTTATTACAATT TTAACCTTTCATAGATCATTTGCACTTAATACCATGTTAAACATGAACATCACCTAATTA CACGAAAACAAAATACAGGAGGACTGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAA ACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCT GCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGATAGCGCACCGACG ACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCA TTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAG AAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGAT TGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGA TATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTA GATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTT TCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGAAAATTTGATTAGG GGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATCTGTACATAGGATT GCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTTGTCATTGCAGATGAAT AAAGATTTCAGAGACAGGCA



consensusID : consensus_12790#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1305
fasta sequence
                              [CTTGCTATTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGGTGTGATTGAGGTGGAGGAGGAGATGAGTTTCATAGGCATGGTGGAGGCGAGAATGCCGCCGGGGTTCAGGTTCCACCCGAGGGACGACGAGCTGGTGCTGGACTACCTCCTGCACAAGCTCGCCGCGGGCGGCCGGGGAGGAGGGGTGTACGGCGGCGGCGGCGGCGTCGCCATCGTCGACGTCGACCTCAACAAGTGCGAGCCATGGGACCTTCCAGACGCGGCGTGCGTGGGAGGCAAGGAGTGGTACTTCTTCAGCCTCCGCGACCGCAAGTACGCCACCGGCCACCGCACCAACCGCGCCACCCGCTCCGGCTACTGGAAGGCCACCGGCAAGGACCGCTCCATCACCCGCCGCTCCTCCATCTCCTCCGGCGAGCCCTCCTCCTCCGCCGCCGCCGCCGCCGTCGGCATGCGCAAGACGCTCGTCTTCTACCGCGGCCGCGCCCCCAAGGGCCGCAAGACCGAGTGGGTCATGCACGAGTTCCGGCTCGAACCGCAGCCTCTCCACCTCAAGGAGGACTGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAAACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGAAAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATCTGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTTGTCATTGCAGATGAATAAAGATTTCAGAGACAGGCATTGTGTGGA]

[+] EMBL AK120197             [CTTGCTATTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGGTGTGATTGAGGTGGAGGAGGAGATGAGTTTCATAGGCATGGTGGAGGCGAGAATGCCGCCGGGGTTCAGGTTCCACCCGAGGGACGACGAGCTGGTGCTGGACTACCTCCTGCACAAGCTCGCCGCGGGCGGCCGGGGAGGAGGGGTGTACGGCGGCGGCGGCGGCGTCGCCATCGTCGACGTCGACCTCAACAAGTGCGAGCCATGGGACCTTCCAGACGCGGCGTGCGTGGGAGGCAAGGAGTGGTACTTCTTCAGCCTCCGCGACCGCAAGTACGCCACCGGCCACCGCACCAACCGCGCCACCCGCTCCGGCTACTGGAAGGCCACCGGCAAGGACCGCTCCATCACCCGCCGCTCCTCCATCTCCTCCGGCGAGCCCTCCTCCTCCGCCGCCGCCGCCGCCGTCGGCATGCGCAAGACGCTCGTCTTCTACCGCGGCCGCGCCCCCAAGGGCCGCAAGACCGAGTGGGTCATGCACGAGTTCCGGCTCGAACCGCAGCCTCTCCACCTCAAGGAGGACTGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAAACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGAAAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATCTGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTTGTCATTGCAGATGAATAAAGATTTCAGAGACAGG           ]
[-] EMBL CB660120             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCCAAGGGCCGCAAGACCGAGTGGGTCATGCACGAGTTCCGGCTCGAACCGCAGCCTCTCCACCTCAAGGAGGACTGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAAACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGAAAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATCTGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTTGTCATTGCAGATGAAGGAAGATTTCAGAGACAGGCA         ]
[-] EMBL CB659558             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGGCCGCAAGACCGAGTGGGTCATGCACGAGTTCCGGCTCGAACCGCAGCCTCTCCACCTCAAGGAGGACTGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAAACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGAAAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATCTGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTTGTCATTGCAGAGGAATAAAGATTTCAGAGACAGGCATTGTGTGGA]
[-] EMBL CB651803             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCCACCTCAAGGAGGACTGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAAACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGAAAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATCTGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTTGTCATTGCAGATGAATAAAGATTTCAGAGACAGGC          ]
[-] EMBL CB664310             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGGTGCTATGCAGGGTGTTTTACAAGACCAGACAAACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCNTGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGAAAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATCTGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTTGTCATTGCAGATGAATAAAGAT                       ]
[-] EMBL CB630087             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTCTACAAGACCAGACAAACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATC      TTGATATTGATATTGATATTGATATTGATATTGATGATGTTTCTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGAAAATTTGATTAGGGGTGTGACATACCCAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATCTGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTTGTCATAGGGGATGAATGAAGATTTCAGAGcc              ]
[-] EMBL CB659557             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATAGATGCCTACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAACGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGGTAGATAGCGATTATTANTGAATGCAGTGTGGCAAATAAATTGTAAAG                                                                                                                                                                                                                                ]


>consensus_12790#1 CTTGCTATTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGGTGT GATTGAGGTGGAGGAGGAGATGAGTTTCATAGGCATGGTGGAGGCGAGAATGCCGCCGGG GTTCAGGTTCCACCCGAGGGACGACGAGCTGGTGCTGGACTACCTCCTGCACAAGCTCGC CGCGGGCGGCCGGGGAGGAGGGGTGTACGGCGGCGGCGGCGGCGTCGCCATCGTCGACGT CGACCTCAACAAGTGCGAGCCATGGGACCTTCCAGACGCGGCGTGCGTGGGAGGCAAGGA GTGGTACTTCTTCAGCCTCCGCGACCGCAAGTACGCCACCGGCCACCGCACCAACCGCGC CACCCGCTCCGGCTACTGGAAGGCCACCGGCAAGGACCGCTCCATCACCCGCCGCTCCTC CATCTCCTCCGGCGAGCCCTCCTCCTCCGCCGCCGCCGCCGCCGTCGGCATGCGCAAGAC GCTCGTCTTCTACCGCGGCCGCGCCCCCAAGGGCCGCAAGACCGAGTGGGTCATGCACGA GTTCCGGCTCGAACCGCAGCCTCTCCACCTCAAGGAGGACTGGGTGCTATGCAGGGTGTT CTACAAGACCAGACAAACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAA TGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTT CGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTT CTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCAT GGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCT GGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATA ATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTT GTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAA GAGGTGACATATTCTTTCCTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATT GGAAAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGA ATCTGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTCTTTACTCTCTAGATGTATTT GTCATTGCAGATGAATAAAGATTTCAGAGACAGGCATTGTGTGGA



consensusID : consensus_12790#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 728
fasta sequence
                              [AAGGCAGTGGTACTTCTTCAGCCTCCGCGACCGCAAGTACGCCACCGGCCACCGCACCAACCGCGCCACCCGCTCCGGCTACTGGAAGGCCACCGGCAAGGACCGCTCCATCACCCGCCGCTCCTCCATCTCCTCCGGCGAGCCCTCCTCCTCCGCCGCCGCCTCCGCCGTCGGCATGCGCAAGACGCTCGTCTTCTACCGCGGCCGCGCCCCCAAGGGCCGCAAGACCGAGTGGGTCATGCACGAGTTCCGGCTCGAACCGCAGCCTCTCCACCTCAAGGTGAAGACAGATTCTGAATTTCTTCTTCTCTCTTCTTCTGTTTTTCTTTTTTTTTTTTGTTGTTGTTCTTCGTTCGGATTGCGTGGATCGGACAAGATCAGAGCACGCCGTTTTCGTGTTCATGTTCGGAGGAAGAAGATTGATGCTGAGTTTTCTTTTTTTTTTTCTGAAGAAAAAAAGATGATGCTGAGTTTTATTAAAATGATAGGGGCGAAATGAAAAGATTGGTTGCTGTTTGCTACAGTTAGAATACCTGTCAAAGAACTCACTGTCAGATTATACATGTTCAGAAAGCTCTGTTACAAATAGGGGGAAAAAATCAGCTTTTAGGGAAAAAAAATGATGCTGAGTTTCTTTTCTTTTTCTGTTTTGTTTTCACACACTATCATGAATTTTATTAAAAGATAGGGGGAAATGAAAAGATTGATTGGTTGCTGTAAATGTTTCT]

[+] EMBL CB630086             [AAGGCAGTGGTACTTCTTCAGCCTCCGCGACCGCAAGTACGCCACCGGCCACCGCACCAACCGCGCCACCCGCTCCGGCTACTGGAAGGCCACCGGCAAGGACCGCTCCATCACCCGCCGCTCCTCCATCTCCTCCGGCGAGCCCTCCTCCTCCGCCGCCGCCTCCGCCGTCGGCATGCGCAAGACGCTCGTCTTCTACCGCGGCCGCGCCCCCAAGGGCCGCAAGACCGAGTGGGTCATGCACGAGTTCCGGCTCGAACCGCAGCCTCTCCACCTCAAGGTGAAGACAGATTCTGAATTTCTTCTTCTCTCTTCTTCTGTTTTTCTTTTTTTTTTTTGTTGTTGTTCTTCGTTCGGATTGCGTGGATCGGACAAGATCAGAGCACGCCGTTTTCGTGTTCATGTTCGGAGGAAGAAGATTGATGCTGAGTTTTCTTTTTTTTTTTCTGAAGAAAAAAAGATGATGCTGAGTTTTATTAAAATGATAGGGGCGAAATGAAAAGATTGGTTGCTGTTTGCTACAGTTAGAATACCTGTCAAAGAACTCACTGTCAGATTATACATGTTCAGAAAGCTCTGTTACAAATAGGGGGAAAAAATCAGCTTTTAGGGAAAAAAAATGATGCTGAGTTTCTTTTCTTTTTCTGTTTTGTTTTCACACACTATCATGAATTTTATTAAAAGATAGGGGGAAATGAAAAGATTGATTGGTTGCTGTAAATGTTTCT]


>consensus_12790#2 AAGGCAGTGGTACTTCTTCAGCCTCCGCGACCGCAAGTACGCCACCGGCCACCGCACCAA CCGCGCCACCCGCTCCGGCTACTGGAAGGCCACCGGCAAGGACCGCTCCATCACCCGCCG CTCCTCCATCTCCTCCGGCGAGCCCTCCTCCTCCGCCGCCGCCTCCGCCGTCGGCATGCG CAAGACGCTCGTCTTCTACCGCGGCCGCGCCCCCAAGGGCCGCAAGACCGAGTGGGTCAT GCACGAGTTCCGGCTCGAACCGCAGCCTCTCCACCTCAAGGTGAAGACAGATTCTGAATT TCTTCTTCTCTCTTCTTCTGTTTTTCTTTTTTTTTTTTGTTGTTGTTCTTCGTTCGGATT GCGTGGATCGGACAAGATCAGAGCACGCCGTTTTCGTGTTCATGTTCGGAGGAAGAAGAT TGATGCTGAGTTTTCTTTTTTTTTTTCTGAAGAAAAAAAGATGATGCTGAGTTTTATTAA AATGATAGGGGCGAAATGAAAAGATTGGTTGCTGTTTGCTACAGTTAGAATACCTGTCAA AGAACTCACTGTCAGATTATACATGTTCAGAAAGCTCTGTTACAAATAGGGGGAAAAAAT CAGCTTTTAGGGAAAAAAAATGATGCTGAGTTTCTTTTCTTTTTCTGTTTTGTTTTCACA CACTATCATGAATTTTATTAAAAGATAGGGGGAAATGAAAAGATTGATTGGTTGCTGTAA ATGTTTCT



consensusID : consensus_12790#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 703
fasta sequence
                              [TGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAAACAATTCCAAGCCCATCATTTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATGGATGCATACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGTTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCNTGCCGTACACCCCTCCTCCCCGGCCGCCGGCGGCGAGCTTGTGCAGGAGGTAGTCCAGCACCAGCTCGTCGTCCCTCGGGTGGAACCTGAACCCCGGCGGCATTCTCGCCTCCACCATGCCTATGAAACTCATCTCCTCCTCCACCTCAATCACACCAAGAAGAAGAAGAAGAAGAAGAAGAAG]

[-] EMBL CB660119             [TGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAAACAATTCCAAGCCCATCATTTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTCATGGATGCATACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGTTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCNTGCCGTACACCCCTCCTCCCCGGCCGCCGGCGGCGAGCTTGTGCAGGAGGTAGTCCAGCACCAGCTCGTCGTCCCTCGGGTGGAACCTGAACCCCGGCGGCATTCTCGCCTCCACCATGCCTATGAAACTCATCTCCTCCTCCACCTCAATCACACCAAGAAGAAGAAGAAGAAGAAGAAGAAG]


>consensus_12790#3 TGGGTGCTATGCAGGGTGTTCTACAAGACCAGACAAACAATTCCAAGCCCATCATTTGAA GAGGCCGTCACACTGCCCAATGAGCTAGACCTGCCTGCCACGCCTTCGCTCCCGCCCCTC ATGGATGCATACATCGCCTTCGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGC TACGAGCAAGTGTCCTGTTTCTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGC TTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCAC AACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCA CAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGA TATTGATATTGATGATGTTTGTGTTGCTACTTGCTAGATAGCGATTACTACTGAATGCAG TGTGGCAAATAACTTGTAAAGAGGTGACATATTCTTTCNTGCCGTACACCCCTCCTCCCC GGCCGCCGGCGGCGAGCTTGTGCAGGAGGTAGTCCAGCACCAGCTCGTCGTCCCTCGGGT GGAACCTGAACCCCGGCGGCATTCTCGCCTCCACCATGCCTATGAAACTCATCTCCTCCT CCACCTCAATCACACCAAGAAGAAGAAGAAGAAGAAGAAGAAG



consensusID : consensus_12790#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 667
fasta sequence
                              [ACAATTCCAAGCCCATCATTTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACTTGCCTGCCACGCCTTGGCTCCCGCCCCTCATGGATGCCTACATCGCCTTGGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTTTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGTTACTTGGTAGATAGGGATTAGTAATGAATGCAGTGTGGCCGTACACCCCTCCTCCCCGGCCGCCGGCGGCGAGCTTGTGCAGGAGGTAGTCCAGCACCAGCTCGTCGTCCCTCGGGTGGAACCTGAACCCCGGCGGCATTCTCGCCTCCACCATGCCTATGAAACTCATCTCCTCCTCCACCTCAATCACACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAATAGCAAGCTAATGGC]

[-] EMBL CB651802             [ACAATTCCAAGCCCATCATTTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACTTGCCTGCCACGCCTTGGCTCCCGCCCCTCATGGATGCCTACATCGCCTTGGATAGCGCACCGACGACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTTTCCGGCCTGCCGGCATTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGTTACTTGGTAGATAGGGATTAGTAATGAATGCAGTGTGGCCGTACACCCCTCCTCCCCGGCCGCCGGCGGCGAGCTTGTGCAGGAGGTAGTCCAGCACCAGCTCGTCGTCCCTCGGGTGGAACCTGAACCCCGGCGGCATTCTCGCCTCCACCATGCCTATGAAACTCATCTCCTCCTCCACCTCAATCACACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAATAGCAAGCTAATGGC]


>consensus_12790#4 ACAATTCCAAGCCCATCATTTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACTTGCCT GCCACGCCTTGGCTCCCGCCCCTCATGGATGCCTACATCGCCTTGGATAGCGCACCGACG ACGACGCCATCGATGGTCGGGAGCTACGAGCAAGTGTCCTGCTTTTCCGGCCTGCCGGCA TTGCCAATGAAGGGCTCCATCAGCTTTGGGGACCTGCTGGCCATGGACACCTCTGCAGAG AAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCTCTCCCCAGAT TGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATCTTGATCTTGA TATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTGTTACTTGGTA GATAGGGATTAGTAATGAATGCAGTGTGGCCGTACACCCCTCCTCCCCGGCCGCCGGCGG CGAGCTTGTGCAGGAGGTAGTCCAGCACCAGCTCGTCGTCCCTCGGGTGGAACCTGAACC CCGGCGGCATTCTCGCCTCCACCATGCCTATGAAACTCATCTCCTCCTCCACCTCAATCA CACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAATAGCAAGC TAATGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      GAAATGAAAAGATTGATTGGTTGCTGTAGGTGTTTCTGTTTGCTACAGTGAGAATGCCTG 60
consensus_12790#1      ------------------------------------------------------------
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      TCAAAGAATTCACTGTCAGATTATACATGTTCAGAAAGCTCTGTTACAAATAGAAAAAAA 120
consensus_12790#1      ------------------------------------------------------------
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      AACAGCTTTTAGGGGAAAAAAGATGATGCTGAGTTTCTTTTCTTTTTTCTGTTTTGTTTT 180
consensus_12790#1      ------------------------------------------------------------
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      CACAAACTGTCATGAACTTTATTAAAAGATAGGGGGAAATGAAAAGATTGATTGGTTGCT 240
consensus_12790#1      ------------------------------------------------------------
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      GTAGATGTTTCTGTTTGCTACAGTGAGAATACCTGTCTCACTGTCAGATTATACATGTTT 300
consensus_12790#1      ------------------------------------------------------------
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      AGAAAGCTCTGTTACAAATAGAAAAAAAAAATCAGCTTTTAGGGGAAAAAATTAGGCTTT 360
consensus_12790#1      ------------------------------------------------------------
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      TTTTATTGTCATGTTGCTACCTCCAGTGAGCTCATCATCATCTGTTGTGTCATCATATGC 420
consensus_12790#1      ------------------------------------------------------------
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      GTGTTGCCGTCACCTACCATGGCAATTGGCAAAGCCTGAATTTTGTAACAATATGGTCTC 480
consensus_12790#1      -----------------------------------------CTTGCTATTCTCTCTTCTT 19
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      TAACTGTTCGTTTTCAGGCTAACTCGATGCTTCTCTCAACATTCTTTCCTGATAAACTAG 540
consensus_12790#1      CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGGTGTGATTGAGGTGGAGGAGGAG 79
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      CTGCAAGTTGCCAGGGCTCTAGTTTTAGTTGGATGACCCTACAAAAAGTTTAGTCTTCTT 600
consensus_12790#1      ATGAGTTTCATAGGCATGGTGGAGGCGAGAATGCCGCCGGGGTTCAGGTTCCACCCGAGG 139
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      TTGATCCAGTCCATAGTTGTTCAGCTGGCTCCATCAGATTACTGAGCTAGATTAATGTCA 660
consensus_12790#1      GACGACGAGCTGGTGCTGGACTACCTCCTGCACAAGCTCGCCGCGGGCGGCCGGGGAGGA 199
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      TAAACATTCCCTCCAAAAGGATTTGACTGTCTTATCGTGGTTGTTTACTCCAAGT-CGAC 719
consensus_12790#1      GGGGTGTACGGCGGCGGCGGCGGCGTCGCCATCGTCGACGTCGACCTCAACAAGTGCGAG 259
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      ACTTAAAACATTCAGGCTTCCATGATTGCTAACTCATCAAGCAACTATATAACTTGCCAA 779
consensus_12790#1      CCATGGGACCTTCCAGACGCGGCGTGCGTGGGAGGCAAGGAGTGGTACTTCTTCAGCCTC 319
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      CAATGATTTCCTCATGCAACTTGCTGCAGAGTCTGTTATGTTGGTTGCATCAGCATTATC 839
consensus_12790#1      CGCGACCGCAAGTACGCCACCGGCCACCGCACCAACCGCGCCACCCGCTCCGGCTACTGG 379
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      CATCGTGCTAATAAGTTAATGAAATTTGAAGTCTTCTTGTCCTTAACCACTACATATGAC 899
consensus_12790#1      AAGGCCACCGGCAAG---GACCGCTCCATCACCCGCCGCTCCTCCATCTCCTCCGGCGAG 436
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      CTGAAAATGATTTGATTCTCTACAGAATAATGTTCAGTTACAGTTATTACTTATTACAAT 959
consensus_12790#1      CCCTCCTCCTCCGCCGCCGCCGCCGCCGTCGGCATGCGCAAGACGCTCGTCTTCTACCGC 496
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      ------------------------------------------------------------
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      TTTAACCTTTCATAGATCATTTGCACTTAATACCATGTTAAACATGAACATCACCTAATT 1019
consensus_12790#1      GGCCGCGCCCCCAAGGGCCGCAAGACCGAGTGG-GTCATGCACGAGTTCCGGCTCGAACC 555
consensus_12790#2      ------------------------------------------------------------
                                                                                   

consensus_12790#3      -------------------------TGGGTGCTATGCAGGGTGTTCTACAAGACCAGACA 35
consensus_12790#4      ------------------------------------------------------------
consensus_12790#0      ACACGAAAACAAAATACAGGAGGACTGGGTGCTATGCAGGGTGTTCTACAAGACCAGACA 1079
consensus_12790#1      GCAGCCTCTCCACCTCAAGGAGGACTGGGTGCTATGCAGGGTGTTCTACAAGACCAGACA 615
consensus_12790#2      ------------------AAGGCAGTGGTACTTCTTCAG-----CCTCCGCGACCGCAAG 37
                                                                                   

consensus_12790#3      AACAATTCCAAGCCCATCATTTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCC 95
consensus_12790#4      -ACAATTCCAAGCCCATCATTTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACTTGCC 59
consensus_12790#0      AACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCC 1139
consensus_12790#1      AACAATTCCAAGCCCATCATCTGAAGAGGCCGTCACACTGCCCAATGAGCTAGACCTGCC 675
consensus_12790#2      TACGCCACCGGCCACCGCACCAACCGCGCCACCCGCTCCGGCTACTGG---AAGGCCACC 94
                        **    **   * *  **      * * *   * * * * * * **    *      **

consensus_12790#3      TGCCACGCCTTCGCTCCCGCCCCTCATGGATGCATACATCGCCTTCGAT-AGCGCACCGA 154
consensus_12790#4      TGCCACGCCTTGGCTCCCGCCCCTCATGGATGCCTACATCGCCTTGGAT-AGCGCACCGA 118
consensus_12790#0      TGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGAT-AGCGCACCGA 1198
consensus_12790#1      TGCCACGCCTTCGCTCCCGCCCCTCATCGATGCCTACATCGCCTTCGAT-AGCGCACCGA 734
consensus_12790#2      GGCAAGGAC--CGCTCC-ATCACCCGCCGCT-CCTCCATCTCCTCCGGCGAGCCCTCCTC 150
                        ** * * *   *****   * * *   * * * * **** ***  *   *** * **  

consensus_12790#3      CGACGACGCCATCGATG--GTCGGGAGCTACGAGCAAGTGTCCTGTTTCTCCGGCC-TGC 211
consensus_12790#4      CGACGACGCCATCGATG--GTCGGGAGCTACGAGCAAGTGTCCTGCTTTTCCGGCC-TGC 175
consensus_12790#0      CGACGACGCCATCGATG--GTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCC-TGC 1255
consensus_12790#1      CGACGACGCCATCGATG--GTCGGGAGCTACGAGCAAGTGTCCTGCTTCTCCGGCC-TGC 791
consensus_12790#2      CTCCGCCGCCGCCTCCGCCGTCGGCATGCGCAAGACGCTCGTCTTCTACCGCGGCCGCGC 210
                       *  ** ****  *   *  ***** *    * **    *   **  *    *****  **

consensus_12790#3      CGGCATTGCCAATGAAG--GGCTCCATCAGCTTTGGGGACCTGCTGG--CCATGGACACC 267
consensus_12790#4      CGGCATTGCCAATGAAG--GGCTCCATCAGCTTTGGGGACCTGCTGG--CCATGGACACC 231
consensus_12790#0      CGGCATTGCCAATGAAG--GGCTCCATCAGCTTTGGGGACCTGCTGG--CCATGGACACC 1311
consensus_12790#1      CGGCATTGCCAATGAAG--GGCTCCATCAGCTTTGGGGACCTGCTGG--CCATGGACACC 847
consensus_12790#2      CCCCAAGGGCCGCAAGACCGAGTGGGTCATGCACGAGTTCCGGCTCGAACCGCAGCCTCT 270
                       *  **  * *    *    *  *   ***     * *  ** *** *  **   * * * 

consensus_12790#3      TCTGCA-GAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCT 326
consensus_12790#4      TCTGCA-GAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCT 290
consensus_12790#0      TCTGCA-GAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCT 1370
consensus_12790#1      TCTGCA-GAGAAGAAGGCCATCAGGGTACTGCACAACAGCAACACTGCAAAGCTGGAGCT 906
consensus_12790#2      CCACCTCAAGGTGAAGACAGATTCTGAATTTCTTCTTCTCTCTTCTTCTGTTTTTCTTTT 330
                        *  *   **  **** *       * * * *       *    ** *     *     *

consensus_12790#3      CTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATC 386
consensus_12790#4      CTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATC 350
consensus_12790#0      CTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATC 1430
consensus_12790#1      CTCCCCAGATTGGGGACAGGAGAGTGGCCTGTCACAGATGTGGAACCCCCAATAATGATC 966
consensus_12790#2      TTTTTTTTGTTGTTGTTCTTCGTTCGGATTG-CGTGGAT-CGGA--CAAGATCAGAGCAC 386
                        *       ***  *      *   **  ** *   ***  ***  *   *  *  *  *

consensus_12790#3      TTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTG 446
consensus_12790#4      TTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTG 410
consensus_12790#0      TTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTG 1490
consensus_12790#1      TTGATCTTGATATTGATATTGATATTGATATTGATATTGATATTGATGATGTTTGTGTTG 1026
consensus_12790#2      GCCGTTTTCGTGTTCATGTTCGGAGGAAGA---AGATTGATGCTGAGTTTTCTTTTTTTT 443
                           * **  * ** ** **   *   * *   * ******  ***   *  ** * ** 

consensus_12790#3      CTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTG 506
consensus_12790#4      TTACTTGGTAGATAGGGATTAGTAATGAATGCAGTGTGGC-------------------- 450
consensus_12790#0      CTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTG 1550
consensus_12790#1      CTACTTGCTAGATAGCGATTACTACTGAATGCAGTGTGGCAAATAACTTGTAAAGAGGTG 1086
consensus_12790#2      TTTCTGAAGAAAAAAAGATGA-TGCTGAGTTTTATTAAAATGATAGGG-GCGAAATGAAA 501
                        * **    * * *  *** * *  *** *    *                         

consensus_12790#3      ACATATTCTTTCNTGCCGTACACCCCTCCTCCCCGGCCGCCGGCGGCGAGCTTGTGCAGG 566
consensus_12790#4      ----------------CGTACACCCCTCCTCCCCGGCCGCCGGCGGCGAGCTTGTGCAGG 494
consensus_12790#0      ACATATTCTTTC---CTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGA 1607
consensus_12790#1      ACATATTCTTTC---CTCTGCTGGAGTAGTAGCTGTGCATACATTTTGTATTTGATTGGA 1143
consensus_12790#2      AGATTGGTTGCTGTTTGCTACAGTTAGAATACCTGTCAAAGAACTCACTGTCAGATTAT- 560
                                         * *        *  * *                  *      

consensus_12790#3      AGGTA-GTCCAGCACCAGCTCGTCGTCCCTCGGGTGGAACCTGAACCCCGGCGGCATTCT 625
consensus_12790#4      AGGTA-GTCCAGCACCAGCTCGTCGTCCCTCGGGTGGAACCTGAACCCCGGCGGCATTCT 553
consensus_12790#0      AAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATC 1667
consensus_12790#1      AAATTTGATTAGGGGTGTGACATACACAGTAGAGTAGTGAAAATGGCTTGGTGTAGAATC 1203
consensus_12790#2      ACATGTTCAGAAAGCTCTGTTACAAATAGGGGGAAAAAATCAGCTTTTAGGGAAAAAAAA 620
                       *  *      *                    *                 **         

consensus_12790#3      CGCCTCCACCAT-GCCTATGAAACTCATCTCCTCCTC---CACCTCAATCACACCAAGAA 681
consensus_12790#4      CGCCTCCACCAT-GCCTATGAAACTCATCTCCTCCTC---CACCTCAATCACACCAAGAA 609
consensus_12790#0      TGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTC---TTTACTCTCTAGATGTATTT 1724
consensus_12790#1      TGTACATAGGATTGCAGAAAAGGGTTATCCCTTTCTC---TTTACTCTCTAGATGTATTT 1260
consensus_12790#2      TGATGCTGAGTTTCTTTTCTTTTTCTGTTTTGTTTTCACACACTATCATGAATTTTATTA 680
                        *         *               *    *  **             *     *   

consensus_12790#3      GAAGAAGAAGAAGAAGAAGAAG------------------------------------ 703
consensus_12790#4      GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAATAGCAAGCTAATGGC 667
consensus_12790#0      GTCATTGCAGATGAATAAAGATTTCAGAGACAGGCA---------------------- 1760
consensus_12790#1      GTCATTGCAGATGAATAAAGATTTCAGAGACAGGCATTGTGTGGA------------- 1305
consensus_12790#2      AAAGATAGGGGGAAATGAAAAGATTGATTGGTTGCTGTAAATGTTTCT---------- 728
                                *   **  *  *                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)