These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12803#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1032 fasta sequence [CATCCATCTCCCACCACCACACCTTCGCCCCTCCCGCGGCAACCACCGCTCCTCGCCGCCCTCGGATGCTCCCGCCGCCGCCTCCGCCGCAATCCGAGTCATCGGCGGCGGCCGCGCTCTAGCCGCTCGCTCGCTGTTGGCACGGTCCCGGAGCGGAGCCGGAGCGCATGGCGGAGGCCCTCCTCCCCCTGCCCCGGCGCCTCGTCGTCACCGCCTCCACGCCCGCGTGCTCCTCTGCCTCCTCCTCCACGTCCCCGTCGCCTCACTGCCTCCTCTCGCGCGCCAACCCGCGCCCGCCGCGCTTGGCCGCCCCCTCGCCCCCGCGCCACCGCCGCCTCAAGGCCCATGCAGCCGTCTCAGACAAAAGTGAGCAACCAAAATGGTGGGAGAAGAATGCTGGTCCAAATATGATTGACATCCACTCTACACAAGAGTTCTTGGATGCACTGAGGGATGCAGGCGACAGGCTTGTAATTGTGGAGTTTTATGGAACTTGGTGTGGTTCTTGCAGGGCACTCTTCCCAAGGCTCTGCAGAACAGCTGTGGAGAATCCTGATATCTTGTTCTTAAAAGTAAATTTTGATGAAAATAAACCTATGTGCAAACGGTTGAATGTGAAAGTCCTTCCTTACTTCCATTTTTACCGTGGAGCTGACGGGCAATTGGAGGCGTTCTCATGTTCCTTGGCGAAGTTTCAG-AAACTGAAGG-ATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGCTATATCTGCTCATTTTTTTTACCTCGATAGATCTTACTGTAACCAACTCAGGAGAATATTCAGTTTTCCTGGATAGGGGTGGCCAGGCAACGGGCCAGCATCAGATGTTGTAAGCATTACTGTTTAATTTTTTTGAGAAAGAAAAATCGTGTATTAAAAACACTGTCAAAAAAAAAAA] [+] EMBL AK061208 [CATCCATCTCCCACCACCACACCTTCGCCCCTCCCGCGGCAACCACCGCTCCTCGCCGCCCTCGGATGCTCCCGCCGCCGCCTCCGCCGCAATCCGAGTCATCGGCGGCGGCCGCGCTCTAGCCGCTCGCTCGCTGTTGGCACGGTCCCGGAGCGGAGCCGGAGCGCATGGCGGAGGCCCTCCTCCCCCTGCCCCGGCGCCTCGTCGTCACCGCCTCCACGCCCGCGTGCTCCTCTGCCTCCTCCTCCACGTCCCCGTCGCCTCACTGCCTCCTCTCGCGCGCCAACCCGCGCCCGCCGCGCTTGGCCGCCCCCTCGCCCCCGCGCCACCGCCGCCTCAAGGCCCATGCAGCCGTCTCAGACAAAAGTGAGCAACCAAAATGGTGGGAGAAGAATGCTGGTCCAAATATGATTGACATCCACTCTACACAAGAGTTCTTGGATGCACTGAGGGATGCAGGCGACAGGCTTGTAATTGTGGAGTTTTATGGAACTTGGTGTGGTTCTTGCAGGGCACTCTTCCCAAGGCTCTGCAGAACAGCTGTGGAGAATCCTGATATCTTGTTCTTAAAAGTAAATTTTGATGAAAATAAACCTATGTGCAAACGGTTGAATGTGAAAGTCCTTCCTTACTTCCATTTTTACCGTGGAGCTGACGGGCAATTGGAGGCGTTCTCATGTTCCTTGGCGAAGTTTCAG AAACTGAAGG ATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGCTATATCTGCTCATTTTTTTTACCTCGATAGATCTTACTGTAACCAACTCAGGAGAATATTCAGTTTTCCTGGATAGGGGTGGCCAGGCAACGGGCCAGCATCAGATGTTGTAAGCATTACTGTTTAATTTTTTTGAGAAAGAAAAATCGTGTATT ] [+] EMBL CF301616 [ CACCACCACACCTTCGCCCCTCCCGCGGCAACCACCGCTCCTCGCCGCCCTCGGATGCTCCCGCCGCCGCCTCCGCCGCAATCCGAG CATCGGCGGCGGCCGCGCTCTAGCCGCTCGCTCGCTGTTGGCACGGTCCCGGAGCGGAGCCGGAGCGCATGGCGGAGGCCCTCCTCCCCCTGCCCCGGCGCCTCGTCGTCACCGCCTCCACGCCCGCGTGCTCCTCTGCCTCCTCCTCCACGTCCCCGTCGCCTCACTGCCTCCTCTCGCGCGCCAACCCGCGCCCGCCGCGCTTGGCCGCCCCCTCGC ] [+] EMBL AK099199 [ CACCGCTCCTCGCCGCCCTCGGATGCTCCCGCCGCCGCCTCCGCCGCAATCCGAGTCATCGGCGGCGGCCGCGCTCTAGCCGCTCGCTCGCTGTTGGCACGGTCCCGGAGCGGAGCCGGAGCGCATGGCGGAGGCCCTCCTCCCCCTGCCCCGGCGCCTCGTCGTCACCGCCTCCACGCCCGCGTGCTCCTCTGCCTCCTCCTCCACGTCCCCGTCGCCTCACTGCCTCCTCTCGCGCGCCAACCCGCGCCCGCCGCGCTTGGCCGCCCCCTCGCCCCCGCGCCACCGCCGCCTCAAGGCCCATGCAGCCGTCTCAGACAAAAGTGAGCAACCAAAATGGTGGGAGAAGAATGCTGGTCCAAATATGATTGACATCCACTCTACACAAGAGTTCTTGGATGCACTGAGGGATGCAGGCGACAGGCTTGTAATTGTGGAGTTTTATGGAACTTGGTGTGGTTCTTGCAGGGCACTCTTCCCAAGGCTCTGCAGAACAGCTGTGGAGAATCCTGATATCTTGTTCTTAAAAGTAAATTTTGATGAAAATAAACCTATGTGCAAACGGTTGAATGTGAAAGTCCTTCCTTACTTCCATTTTTACCGTGGAGCTGACGGGCAATTGGAGGCGTTCTCATGTTCCTTGGCGAAGTTTCAG AAACTGAAGG ATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGCTATATCTGCTCATTTTTTTTACCTCGATAGATCTTACTGTAACCAACTCAGGAGAATATTCAGTTTTCCTGGATAGGGGTGGCCAGGCAACGGGCCAGCATCAGATGTTGTAAGCATTACTGTTTAATTTTTTTGAGAAAGAAAAATCGTGTATT ] [-] EMBL CF301615 [ GGGATGCAGGCGACAGGCTTGTAATTGTGGAGTTTTATGGAACTTGGTGTGGTTCTTGCAGGGCACTCTTCCCAAGGCTCTGCAGAACAGCTGTGGAGAATCCTGATATCTTGTTCTTAAAAGTAAATTTTGATGAAAATAAACCTATGTGCAAACGGTTGAATGTGAAAGTCCTTCCTTACTTCCATTTTTACCGTGGAGCTGACGGGCAATTGGAGGCGTTCTCATGTTCCTTGGCGAAGTTTCAG AAACTGAAGG ATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGCTATATCTGCTCATTTTTTTTACCTCGATAGATCTTACTGTAACCAACTCAGGAGAATATTCAGTTTTCCTGGATAGGGGTGGCCAGGCAACGGGCCAGCATCAGATGTTGTAAGCATTACTGTTT ATTTTTTT AGAAAGAAAAAAAAAAAAAAAAAAACACTGTCA ] [+] EMBL BE230240 [ GGCTTGTAATTGTGGAGTTTTATGGAACTTGGTGTGGTTCTTGCAGGGCACTCTTCCCAAGGCTCTGCAGAACAGCTGTGGAGAATCCTGATATCTTGTTCTTAAAAGTAAATTTTGATGAAAATAAACCTATGTGCAAACGGTTGAATGTGAAAGTCCTTCCTTACTTCCATTTTTACCGTGGAGCTGACGGGCAATTGGAGGCGTTCTCATGTTCCTTGGCGAAGTTTCAG AAACTGAAGG ATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGCTATATCTGCTCATTTTTTTTACCTCGATAGATCTTACTGTAACCAACTCAGGAGAATATTCAGTTTTCCTGGATAGGGGTGGCCAGGCAACGGGCCAGCATCAGATGTTGTAAGCATT ] [+] EMBL AA754558 [ CGGGCCCNTGGAGGCATNCTCATNTTCCTTGGCGAAGTTTCAG AAACTGAANG ATGCAATTGCTNTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGANTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGCTATATCTGCTCATTTTTTTTACCTCGATAGATCTTACTGTAACCAACTCAGGAGAATATTCAGTTTTCCTGGATAGGGGTGGCCAGGCAACNGGCNTNCATCAGATGTTGTAAGCATTACTGTTTAATTTTTTTGAGAAAGAAAAA ] [+] EMBL AU033254 [ AANTTTCAGAAAACTGAAGGNATGCAATTGCTGTTCACAANACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTANAGTGCGTCTCGCTCTCCATTGCTATATCTGCTCATTTTTTTTACCTCGATAGATCTTACTGTAACCAACTCAGGAGAATANTCAGTTTTCCTGGATAGGGGTGGCCAGGCNACGGGCCAGCATCAGATGTTGTAANCATTACTGTTTAATTTTTTTGAGAAAGNAAAATCGTGTAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_12803#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 847 fasta sequence [TTTGCTTCACCTTTCAAGTAGTTAATCACTTAATCTTCAATTCTTCATAATAGTCGGTTCAAAAAGGCATTTTTACTTTTTGAACAACCCTCTCATGGGACATGGGTTAGCTGGCCATGTGTGTACCAGCAGTCGGCATGCTAACCCACCGCTCATGCTCCTCAACCATGTTCCTTGATCCAGTGAACCCGGATTGAACAGCCCCAGTTGTAATGCAATAAATTGTCCACCTGCAGCTTATGTATATAAGGCTCATTTTATAATATCACGTTATTGTTTTGGCCAGTCACTGTTAATTTCAGAAACTCAAGTTTTCCTTGGTGATAATTCTTTTCCCTGAAGTACATTTCCTCTCTTTTTCTGATGGTATAGAGAGTGTTCTGTAGTGAAACATTAAGGGTTTATATCTGCTTTTATGTGTGTTTTCCACTTATCAGAAACTGTTCTTGCTTGCAGTTTCAGAAACTGAAGGATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGCTATATCTGCTCATTTTTTTTACCTCGATAGATCTTACTGTAACCAACTCAGGAGAATATTCAGTTTTCCTGGATAGGGGTGGCCAGGCAACGGGCCAGCATCAGATGTTGTAAGCATTACTGTTTAATTTTTTTGAGAAAGAAAAATCGTGTATTATAGTGTGTCAACTTCTTATGCTTGTCTAAAAGAACCATAGAGTTGTACATCATTTTAGCGGAAAAAAAAAAGA] [-] EMBL CB624725 [TTTGCTTCACCTTTCAAGTAGTTAATCACTTAATCTTCAATTCTTCATAATAGTCGGTTCAAAAAGGCATTTTTACTTTTTGAACAACCCTCTCATGGGACATGGGTTAGCTGGCCATGTGTGTACCAGCAGTCGGCATGCTAACCCACCGCTCATGCTCCTCAACCATGTTCCTTGATCCAGTGAACCCGGATTGAACAGCCCCAGTTGTAATGCAATAAATTGTCCACCTGCAGCTTATGTATATAAGGCTCATTTTATAATATCACGTTATTGTTTTGGCCAGTCACTGTTAATTTCAGAAACTCAAGTTTTCCTTGGTGATAATTCTTTTCCCTGAAGTACATTTCCTCTCTTTTTCTGATGGTATAGAGAGTGTTCTGTAGTGAAACATTAAGGGTTTATATCTGCTTTTATGTGTGTTTTCCACTTATCAGAAACTGTTCTTGCTTGCAGTTTCAGAAACTGAAGGATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGCTATATCTGCTCATTTTTTTTACCTCGATAGATCTTACTGTAACCAACTCAGGAGAATATTCAGTTTTCCTGGATAGGGGTGGCCAGGCAACGGGCCAGCATCAGATGTTGTAAGCATTACTGTTTAATTTTTTTGAGAAAGAAAAATCGTGTATTATAGTGTGTCAACTTCTTATGCTTGTCTAAAAGAACCATAGAGTTGTACATCATTTTAGCGGAAAAAAAAAAGA] consensusID : consensus_12803#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 813 fasta sequence [TGTGTCCGGTTTTTCGGAGGTCAATTTGTTGATTCTACGCGACCCTGTAGATCGCTATAGCACCACAAACGGCTTTGCGTTTGGTGTGGATTGGGGAAGGAAAGGCTTACTACTACTACTAGCTTTTATGTCTTTTGAGGGGTTCAAAACTTGAAATTGAGCCAAACAAGTCTCTCGAAATCATGCATGCTTCATCACCTAGCATACCATAAGTGCCATTGCTGGGTCTTTGTACAGTATCTCTGTTGCTTGATGTCAATTGAAATGGTACATGTTATGATGGAAAATGCATGGCAACTTGGTATTTTGAAGACCGCAGTTTTTCACCTCGAAATGGGTTCTTACATCATTCTTTTGTGGATTTTAGATTAGACTTTGCTCCACGATTACTTTATTCACGACAAAACATGCATAAGCTTTGCATTTATGTTTATACGTTATTGTTATATATTGTATTGTGCTTGTTTTATTTAGCCGATAGGAATCACATTAACAATTAACATCTTTCTCCTTTTCTGCCAGGATTTTATATATGTTTTGGCAACTGTGAGTGGTATGAACTAACTATTGAACTTTCAAAACGTGTCAATTTGTCCTTGCTTGAGATTTTTGTGGATGTCCTACTAGTTTATCTTGAGTTTACGTGCTTTGGAGTTCGTATGGTATTGGACAAGTTTGCCGCTGATGTTTTGATCGTTTTGGTTGATCTTGCTCTAGGCCCATGCAGCCGTCTCAGACAAAAGTGAGCAACCAATATGGTGGGAGAAGAATGCTGGTCCAAATATGATTGACATCCACTCTACACAAGAGTTC] [+] EMBL CB624724 [TGTGTCCGGTTTTTCGGAGGTCAATTTGTTGATTCTACGCGACCCTGTAGATCGCTATAGCACCACAAACGGCTTTGCGTTTGGTGTGGATTGGGGAAGGAAAGGCTTACTACTACTACTAGCTTTTATGTCTTTTGAGGGGTTCAAAACTTGAAATTGAGCCAAACAAGTCTCTCGAAATCATGCATGCTTCATCACCTAGCATACCATAAGTGCCATTGCTGGGTCTTTGTACAGTATCTCTGTTGCTTGATGTCAATTGAAATGGTACATGTTATGATGGAAAATGCATGGCAACTTGGTATTTTGAAGACCGCAGTTTTTCACCTCGAAATGGGTTCTTACATCATTCTTTTGTGGATTTTAGATTAGACTTTGCTCCACGATTACTTTATTCACGACAAAACATGCATAAGCTTTGCATTTATGTTTATACGTTATTGTTATATATTGTATTGTGCTTGTTTTATTTAGCCGATAGGAATCACATTAACAATTAACATCTTTCTCCTTTTCTGCCAGGATTTTATATATGTTTTGGCAACTGTGAGTGGTATGAACTAACTATTGAACTTTCAAAACGTGTCAATTTGTCCTTGCTTGAGATTTTTGTGGATGTCCTACTAGTTTATCTTGAGTTTACGTGCTTTGGAGTTCGTATGGTATTGGACAAGTTTGCCGCTGATGTTTTGATCGTTTTGGTTGATCTTGCTCTAGGCCCATGCAGCCGTCTCAGACAAAAGTGAGCAACCAATATGGTGGGAGAAGAATGCTGGTCCAAATATGATTGACATCCACTCTACACAAGAGTTC] consensusID : consensus_12803#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence [AAGGTGTTTTATCATGATGTATTTTGAATGTTTTAGGAAGGCCTTGTTCTCAGAGAGACAATTTTAGGGACGTCGATAATGATAATGGGGAACATTATAATCTCATCCCATGCATCTTTTTTTGCCCTTGTCCTACTTGTTTTCATGGATAAAATAGTTTTAACATTTCCATCTCACCCAGCTGACTGTTATATTGCGAGGACTTCCTTAGAGCATGTTGCTTAAACTAATGTGTTCTTTATTGTTTTGCAGCTCTGCAGAACAGCTGTGGAGAATCCTGATATCTTGTTCTTAAAAGTAAATTTTGATGAAAATAAACCTATGTGCAAACGGTTGAATGTGAAAGTCCTTCCTTACTTCCATTTTTACCGTGGAGTTGCCGCGCAATTGGAGGCGTTTTCATGTTCCTTGGCGAAGTTTCAGAAACTGAAGGATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGGTATATGTGCTCATTTTTTTTCCCTCGATAGATTTTACTGTAACCAACTCAGGAGAATATTCAGTTTT] [-] EMBL CB678464 [AAGGTGTTTTATCATGATGTATTTTGAATGTTTTAGGAAGGCCTTGTTCTCAGAGAGACAATTTTAGGGACGTCGATAATGATAATGGGGAACATTATAATCTCATCCCATGCATCTTTTTTTGCCCTTGTCCTACTTGTTTTCATGGATAAAATAGTTTTAACATTTCCATCTCACCCAGCTGACTGTTATATTGCGAGGACTTCCTTAGAGCATGTTGCTTAAACTAATGTGTTCTTTATTGTTTTGCAGCTCTGCAGAACAGCTGTGGAGAATCCTGATATCTTGTTCTTAAAAGTAAATTTTGATGAAAATAAACCTATGTGCAAACGGTTGAATGTGAAAGTCCTTCCTTACTTCCATTTTTACCGTGGAGTTGCCGCGCAATTGGAGGCGTTTTCATGTTCCTTGGCGAAGTTTCAGAAACTGAAGGATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGGTATATGTGCTCATTTTTTTTCCCTCGATAGATTTTACTGTAACCAACTCAGGAGAATATTCAGTTTT] consensusID : consensus_12803#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence [CGCTCCCCTCCGCCCTCGGATGCTCCCGCCGCCGCCTCCGCCGCAATCCGAGTCATCGGCGGCGGCCGCGCTCTAGCCGCTCGCTCGCTGTTGGCACGGTCCCGGAGCGGAGCCGGAGCGCATGGCGGAGGCCCTCCTCCCCCTGCCCCGGCGCCTCGTCGTCACCGCCTCCACGCCCGCGTGCTCCTCTGCCTCCTCCTCCACGTCCCCGTCGCCTCACTGCCTCCTCTCGCGCGCCAACCCGCGCCCGCCGCGCTTGGCCGCCCCCTCGCCCCCGCGCCACCGCCGCCTCAAGGCCCATGCAGCCGTCTCAGACAAAAGTGAGCAACCAAAGTGGTGGGAGAACAATGCTGGTCCAAATATGATTGACGTCCACTCTACACAAGAGTTCTTGGATGCACTGAGGGATGCAGGCGACAGGCTTGTAATTGTGGAGTTTTATGGAACTTGGTGTGGTTCTTGCAAGGCACTCTTCCCAAGGGTATTTCTCATTTCCTACTGCTGCCATG] [+] EMBL CB678463 [CGCTCCCCTCCGCCCTCGGATGCTCCCGCCGCCGCCTCCGCCGCAATCCGAGTCATCGGCGGCGGCCGCGCTCTAGCCGCTCGCTCGCTGTTGGCACGGTCCCGGAGCGGAGCCGGAGCGCATGGCGGAGGCCCTCCTCCCCCTGCCCCGGCGCCTCGTCGTCACCGCCTCCACGCCCGCGTGCTCCTCTGCCTCCTCCTCCACGTCCCCGTCGCCTCACTGCCTCCTCTCGCGCGCCAACCCGCGCCCGCCGCGCTTGGCCGCCCCCTCGCCCCCGCGCCACCGCCGCCTCAAGGCCCATGCAGCCGTCTCAGACAAAAGTGAGCAACCAAAGTGGTGGGAGAACAATGCTGGTCCAAATATGATTGACGTCCACTCTACACAAGAGTTCTTGGATGCACTGAGGGATGCAGGCGACAGGCTTGTAATTGTGGAGTTTTATGGAACTTGGTGTGGTTCTTGCAAGGCACTCTTCCCAAGGGTATTTCTCATTTCCTACTGCTGCCATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12803#0 ------------------------------------------------------------ consensus_12803#4 ------------------------------------------------------------ consensus_12803#1 TTTGCTTCACCTTTCAAGTAGTTAATCACTTAATCTTCAATTCTTCATAATAGTCGGTTC 60 consensus_12803#3 ----------------------AAGGTGTTTTATCATGATGTATTTTGAAT----GTTTT 34 consensus_12803#2 ----------------TGTGTCCGGTTTTTCGGAGGTCAATTTGTTGATTCTACGCGACC 44 consensus_12803#0 -----------------------CATCCATCTCCCACCACCACACCTTCGCCCCTCCCGC 37 consensus_12803#4 ------------------------------------------------------------ consensus_12803#1 AAAAAGGCATTTTTACTTTTTGAACAACCCTCTCATGGGACATGGGTTAGCTGGCCATGT 120 consensus_12803#3 AGGAAGGC---CTTGTTCTCAGAGAGACAATTTTA-GGGACGTCGATAA--TGATAATGG 88 consensus_12803#2 CTGTAGATCGCTATAGCACCACAAACGGCTTTGCGTTTGGTGTGGATTGGGGAAGGAAAG 104 consensus_12803#0 GGCAACCACCGCTCCTCGCCGCCCTCGGATGCTCCCGCCGCCGCCTC-------CGCCGC 90 consensus_12803#4 ---------CGCTCCCCTCCGCCCTCGGATGCTCCCGCCGCCGCCTC-------CGCCGC 44 consensus_12803#1 GTGTACCAGCAGTCGGCATGCTAACCCACCGCTCATGCTCCTCAACCAT----GTTCCTT 176 consensus_12803#3 GGAACATTATAATCT-CATCCCATGCATCTTTTTTTGCCCTTGTCCTAC----TTGTTTT 143 consensus_12803#2 GCTTACTACTACTAC-TAGCTTTTATGTCTTTTGAGGGGTTCAAAACTTGAAATTGAGCC 163 * * * consensus_12803#0 AATCCGAGTCATCGGCGGCGGCCGCGCTCTAGCCGCTCGCTCGCTGTTGGCACGGTCCCG 150 consensus_12803#4 AATCCGAGTCATCGGCGGCGGCCGCGCTCTAGCCGCTCGCTCGCTGTTGGCACGGTCCCG 104 consensus_12803#1 GATCCAGTGAACCCGGATTGAACA-GCCCCAGTTGTAATGCAATAAATTGTCCACCTGCA 235 consensus_12803#3 CATGGATAAAAT--AGTTTTAACA-TTTCCA--TCTCACCCAGCTGACTGTTATATTGCG 198 consensus_12803#2 AAACAAGTCTCTCGAAATCATGCATGCTTCATCACCTAGCATACCATAAGTGCCATTGCT 223 * * * * * consensus_12803#0 GAGCGGAGCCGGAGCGCATGGCGGAGGCCCTCCTCCCCCTGCCCCGGCGCCTCGTCGTCA 210 consensus_12803#4 GAGCGGAGCCGGAGCGCATGGCGGAGGCCCTCCTCCCCCTGCCCCGGCGCCTCGTCGTCA 164 consensus_12803#1 GCTTATGTATATAAGGCTCATTTTATAATATCACGTTATTGTTTTGGCCAGTCACTGTTA 295 consensus_12803#3 AGG-ACTTCCTTAGAGCATGTTGCTTAAACTAATGTGTTCTTTATTGTT--TTGCAGCTC 255 consensus_12803#2 GGG--TCTTTGTACAGTATCTCTGTTGCTTGATGTCAATTGAAATGGTAC-ATGTTATGA 280 * * * consensus_12803#0 CCGCCTCCACGCCCGCGTGCTCCTCTGC-------CTCCTCCTCCACGTCCCCGTCGCCT 263 consensus_12803#4 CCGCCTCCACGCCCGCGTGCTCCTCTGC-------CTCCTCCTCCACGTCCCCGTCGCCT 217 consensus_12803#1 ATTTCAGAA-ACTCAAGTTTTCCTTGGTGATAATTCTTTTCCCTGAAGTACATTTCCTCT 354 consensus_12803#3 TGCAGAACA-GCTGTGGAGAATCCTGAT----ATCTTGTTCTTAAAAGTAAATTTTGA-T 309 consensus_12803#2 TGGAAAATGCATGGCAACTTGGTATTTTGAAGACCGCAGTTTTTCACCTCGAAATGGGTT 340 * * * * * consensus_12803#0 CACTGCCTCCTCTCGCGCGCCAACCCGCG--------CCCGCCGCGCTTGGCCGCCCCCT 315 consensus_12803#4 CACTGCCTCCTCTCGCGCGCCAACCCGCG--------CCCGCCGCGCTTGGCCGCCCCCT 269 consensus_12803#1 CTTTTTCTGATGGTATAGAGAGTGTTCTGTAGTGAAACATTAAGGGTTTATATCTGCTTT 414 consensus_12803#3 GAAAATAAACCTATGTGCAAACGGTTGAATGTGAAAGTCCTTC---CTTACTTCCATTTT 366 consensus_12803#2 CTTACATCATTCTTTTGTGGAT-TTTAGATTAGACTTTGCTCCACGATTACTTTATTCAC 399 ** consensus_12803#0 CGCC---CCCGCGCCACCGCCGCCTCAAGGCCCATGCAGCCGTCTCAGACA--AAAGTGA 370 consensus_12803#4 CGCC---CCCGCGCCACCGCCGCCTCAAGGCCCATGCAGCCGTCTCAGACA--AAAGTGA 324 consensus_12803#1 TAT----GTGTGTTTTCCACTTA-TCAGAAAC-------TGTTCTTGCTTG--CAGTTTC 460 consensus_12803#3 TACC---GTGGAGTTGCCGCGCAATTGGAGGCGTTTTCATGTTCCTTGGCG--AAGTTTC 421 consensus_12803#2 GACAAAACATGCATAAGCTTTGCATTTATGTTTATACGTTATTGTTATATATTGTATTGT 459 * * * * consensus_12803#0 GCAACCAAAATGGTGGGAGAAGAATGCTGGTCCAAATATGAT-TGACATCCACTCTACAC 429 consensus_12803#4 GCAACCAAAGTGGTGGGAGAACAATGCTGGTCCAAATATGAT-TGACGTCCACTCTACAC 383 consensus_12803#1 AGAAACTGAAGGATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAG 520 consensus_12803#3 AGAAACTGAAGGATGCAATTGCTGTTCACAACACTGCTCGCTGTAGCATCGGTCCACCAG 481 consensus_12803#2 GCTTGTTTTATTTAGCCGATAGGAATCACATTAACAATTAACATCTTTCTCCTTTTCTGC 519 * * * consensus_12803#0 AAGAGTTCT-TGGATGCACTGAGGGATGCAGGCGACAGGCTTGTAATTGTGGAGTTTTAT 488 consensus_12803#4 AAGAGTTCT-TGGATGCACTGAGGGATGCAGGCGACAGGCTTGTAATTGTGGAGTTTTAT 442 consensus_12803#1 TCGGAGTTG-GGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCT-AGTCCCCG 578 consensus_12803#3 TCGGAGTTG-GGGATGTGCTGGATAGCCCTGAGGAGAAACCTGCAGAAGCT-AGTCCCCG 539 consensus_12803#2 CAGGATTTTATATATGTTTTGGCAACTGTGAGTGGTATGAACTAACTATTGAACTTTCAA 579 * * *** ** * * * * * consensus_12803#0 GGAACTTGGTGTGGTTCTTGCAGGGCACTCTTCCCAAGGCTCTGC---AGAACAGC---T 542 consensus_12803#4 GGAACTTGGTGTGGTTCTTGCAAGGCACTCTTCCCAAGGGTATTT---CTCATTTC---C 496 consensus_12803#1 GTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGCTATATCTGCTCATTTT---T 635 consensus_12803#3 GTAGATTTGTTCTGTTACAGTGCGTCTCGCTCTCCATTGGTATATGTGCTCATTTT---T 596 consensus_12803#2 AACGTGTCAATTTGTCCTTGCTTGAGATTTTTGTGGATGTCCTACTAGTTTATCTTGAGT 639 * ** * * * * * * consensus_12803#0 GTGGAGAATCCTGATATCT--TGTTCTTAAAAGTAAATTTTGATGAAAATAAACCTATGT 600 consensus_12803#4 --------TACTGCTGCCA--TG------------------------------------- 509 consensus_12803#1 TTTACCTCGATAGATCTTAC-TGTAACCAACTCAGGAGAATATTCAGTTTTCCTGGATAG 694 consensus_12803#3 TTTCCCTCGATAGATTTTAC-TGTAACCAACTCAGGAGAATATTCAGTTTT--------- 646 consensus_12803#2 TTACGTGCTTTGGAGTTCGTATGGTATTGGACAAGTTTGCCGCTGATGTTTTGATCGTTT 699 * ** consensus_12803#0 GCAAACGGTTGAATGTGAAAGTCCTTCCTTACTTCCATTTTTACCGTGGAGCTGACGGGC 660 consensus_12803#4 ------------------------------------------------------------ consensus_12803#1 GGGTGGCCAGGCAACGGGCCAGCATCAGATGTTGTAAGCATTACTGTTTAATTTTTTTGA 754 consensus_12803#3 ------------------------------------------------------------ consensus_12803#2 TGGTTGATCTTGCTCTAGGCCCATGCAGCCGTCTCAGACAAAAGTGAGCAACCAATATGG 759 consensus_12803#0 AATTGGAGGCGTTCTCATGTTCCTTGGCGAAGTTTCAGAAACTGAAGGATGCAATTGCTG 720 consensus_12803#4 ------------------------------------------------------------ consensus_12803#1 GAAAGAAAAATCGTGTATTATAGTGTGTCAACTTCTTATGCTTGTCTAAAAGAACCATAG 814 consensus_12803#3 ------------------------------------------------------------ consensus_12803#2 TGGGAGAAGAATGCTGGTCCAAATATGATTGACATCCACTCTACACAAGAGTTC------ 813 consensus_12803#0 TTCACAACACTGCTCGCTGTAGCATCGGTCCACCAGTCGGAGTTGGGGATGTGCTGGATA 780 consensus_12803#4 ------------------------------------------------------------ consensus_12803#1 AGTTGTACATCATTTTAGCGGAAAAAAAAAAGA--------------------------- 847 consensus_12803#3 ------------------------------------------------------------ consensus_12803#2 ------------------------------------------------------------ consensus_12803#0 GCCCTGAGGAGAAACCTGCAGAAGCTAGTCCCCGGTAGATTTGTTCTGTTACAGTGCGTC 840 consensus_12803#4 ------------------------------------------------------------ consensus_12803#1 ------------------------------------------------------------ consensus_12803#3 ------------------------------------------------------------ consensus_12803#2 ------------------------------------------------------------ consensus_12803#0 TCGCTCTCCATTGCTATATCTGCTCATTTTTTTTACCTCGATAGATCTTACTGTAACCAA 900 consensus_12803#4 ------------------------------------------------------------ consensus_12803#1 ------------------------------------------------------------ consensus_12803#3 ------------------------------------------------------------ consensus_12803#2 ------------------------------------------------------------ consensus_12803#0 CTCAGGAGAATATTCAGTTTTCCTGGATAGGGGTGGCCAGGCAACGGGCCAGCATCAGAT 960 consensus_12803#4 ------------------------------------------------------------ consensus_12803#1 ------------------------------------------------------------ consensus_12803#3 ------------------------------------------------------------ consensus_12803#2 ------------------------------------------------------------ consensus_12803#0 GTTGTAAGCATTACTGTTTAATTTTTTTGAGAAAGAAAAATCGTGTATTAAAAACACTGT 1020 consensus_12803#4 ------------------------------------------------------------ consensus_12803#1 ------------------------------------------------------------ consensus_12803#3 ------------------------------------------------------------ consensus_12803#2 ------------------------------------------------------------ consensus_12803#0 CAAAAAAAAAAA 1032 consensus_12803#4 ------------ consensus_12803#1 ------------ consensus_12803#3 ------------ consensus_12803#2 ------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||