cluster # 12819

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Oryza sativa
cluster # 12819 cluster # 12819 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12819#0 length = 2639 sequences # 8
consensus_12819#1 length = 776 sequences # 1

consensus_12819#2 length = 621 sequences # 1
consensus_12819#3 length = 572 sequences # 1

consensusID : consensus_12819#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2639
fasta sequence

                              [CGACGAGACACGAGAAAGGCGACGACCACTGCCTCCTCCACTCCTCCAGATCGCCGCCGCCGCCGCCATGGGGGGCGGCTCCACGGCGCCCCTCCTCGCGGCCTTCGCCTGCGTCTTCCTCGCCGTCTTCCCTCCCGTCGCCTCCGGAGATGCTGCAACGTTGGAGTCAGTTCCGGATCTTGTGAAGGCAATGTACATAAACGTTGAAAGCTTCCCTTGTGTGAGGCTGTTGAATCACTCTGGTCAAGTCGGTTGTTCTAATCCTGGGCATGACAAGGTTATTGCACCGATTGTAAGATTTGGAAACAGAAATGATCAGTTGGTTCAGCCGTCGGCGGTTCTTCTTCCCTTAAATCAGATGACAGATTTCTTTCTGAGGGTATCCAATGATCCAGAACTTTATCGTAAGATAGCTGGCGTACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGAGTTTTCACCGGATAGAAAATTTCCACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGGATCAGGTATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGACTCTGCAAAACCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGCAGAATTTGACCTCGTTATGCAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCTCAGAGAGCAGTCATGCTTGCCTTTAGGAGGACAGAGTGTATGGACTTCGTTACCACCAATCAGCAATTCATCTACAAAGCATCAGAAACCAATAATAATGGTCACTGCATCCCAAGACTCTGCATCATTCTTTCGGGACCGTAGTCTTGGTGCTGATTCTCCCATCTCTGGATTGATTGCCTTGCTCACTGCTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGGAAATTCTTACAGGAATTAGATCAAGGGGCTGACTCTGTTAATGGCATTAGCAGCTTATTGATTGACCAGGTCTTGGAGATTGGTTCCGTTGGCAAGGCCATAAGTCAGGGATATCCACTATTTTATGCGCATGCTGCAGGGAATTCGTCAATTTCGATGAAAATGGTAGATGCACTCCAAAGTGCCAGTGAATCACTTGGTTCTGATAATGTTAAAGTAAAACCAGCAGCTTCATCAAATCCTGGTGTTCCACCATCTTCATTAATGTCGTTCCTAGGAAAGAATTCATCAACTCCTGGACTTGTCTTGGAGGATTTTGATTCCCAATTTTCTAATAGATTTTACCACAGCACTTTGGATGGCCCTGCAAACGTCAATTCTTCGTCAATAGCAGCTGCTGCTGCTTTGATTGCCAGATCATTATACATTCTTGCTAGCGCAGACTTGCCCATTGATCTCATCACACTGAACACTATTAAAGTGAATGTTTCACTGGTAGAAGAATTGATTGGATGTCTACTGAAATGTGATCCTGGTCTTTCTTGCGGAATTGTGAAGAGCTTCATTTCTCCAAGCAACTCATGTCCAAGTCACTATGTTGGTGTTTTTCAGGATTTGCCTGCTGGCACACAGTTTCCTTCATATGCAGATGATATCTCTCGGTTTATATGGAACTTTTTGGCAGACAGAACTTCTAGTTTGGCAGGTAACAGTAGCTCTTGTACTGGACAGTGCCATGATGAAGGCGAAATATGTGTAGGGGCAGAAGTGGAAGGTGGAGGCAGATGTGTTGTATCTACAACTAGATATGTCCCTGCCTATTCAACGCGGCTGAAGTTTGAGGACAATGTATGGCATGTTCTTCCAGTAAACTCTTCAGACCCTTTTAGTGCTGCAGATCCTGTGTGGACCGAAAGCTTCTGGAATACAATTGGCCTCAGGGTGTATGCAGTGCAAGCTACATCTTATGATTGGCTTGTTCTTCTGATCGGGATCATTATTACGGTGGCATCATACTTTGCAGTGATCGTTGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTGAAACATCATCCATTCCCTCCATTATTTCTGAGACCTTGGGCCATCAGATCCTACCACCAAAGCCATCTCTGTAAGGTGCTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAGTCTAACACATGAATTAAGTCGGCAAATCTTAGATGCAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAAC-TA-CAAAAGCCATGTGGAGCCTTCCAG-CTAGAAGGAGATGTGATCC--TAC-TACATGAT-ACATGACACCGACCTACAGGCTGTTGTGATTTGTACTGATGTTCCTGGATCTGCTTGGCTGATTGGCTCTGCATTGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGT-TATGCACGTATCATCTTTGAGTTTTGGCTG-TGTACGTCTCTCCAGTCCTATT-TTCCTACTGTGTTGGGACCAGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCAAGTCAAGAACTGTCCCTATACAATTTTAAATAACTGAAAAGCTCAGATTCGCCATGAAAAAAA]

[+] EMBL AK065166             [CGACGAGACACGAGAAAGGCGACGACCACTGCCTCCTCCACTCCTCCAGATCGCCGCCGCCGCCGCCATGGGGGGCGGCTCCACGGCGCCCCTCCTCGCGGCCTTCGCCTGCGTCTTCCTCGCCGTCTTCCCTCCCGTCGCCTCCGGAGATGCTGCAACGTTGGAGTCAGTTCCGGATCTTGTGAAGGCAATGTACATAAACGTTGAAAGCTTCCCTTGTGTGAGGCTGTTGAATCACTCTGGTCAAGTCGGTTGTTCTAATCCTGGGCATGACAAGGTTATTGCACCGATTGTAAGATTTGGAAACAGAAATGATCAGTTGGTTCAGCCGTCGGCGGTTCTTCTTCCCTTAAATCAGATGACAGATTTCTTTCTGAGGGTATCCAATGATCCAGAACTTTATCGTAAGATAGCTGGCGTACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGAGTTTTCACCGGATAGAAAATTTCCACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGGATCAGGTATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGACTCTGCAAAACCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGCAGAATTTGACCTCGTTATGCAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCTCAGAGAGCAGTCATGCTTGCCTTTAGGAGGACAGAGTGTATGGACTTCGTTACCACCAATCAGCAATTCATCTACAAAGCATCAGAAACCAATAATAATGGTCACTGCATCCCAAGACTCTGCATCATTCTTTCGGGACCGTAGTCTTGGTGCTGATTCTCCCATCTCTGGATTGATTGCCTTGCTCACTGCTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGGAAATTCTTACAGGAATTAGATCAAGGGGCTGACTCTGTTAATGGCATTAGCAGCTTATTGATTGACCAGGTCTTGGAGATTGGTTCCGTTGGCAAGGCCATAAGTCAGGGATATCCACTATTTTATGCGCATGCTGCAGGGAATTCGTCAATTTCGATGAAAATGGTAGATGCACTCCAAAGTGCCAGTGAATCACTTGGTTCTGATAATGTTAAAGTAAAACCAGCAGCTTCATCAAATCCTGGTGTTCCACCATCTTCATTAATGTCGTTCCTAGGAAAGAATTCATCAACTCCTGGACTTGTCTTGGAGGATTTTGATTCCCAATTTTCTAATAGATTTTACCACAGCACTTTGGATGGCCCTGCAAACGTCAATTCTTCGTCAATAGCAGCTGCTGCTGCTTTGATTGCCAGATCATTATACATTCTTGCTAGCGCAGACTTGCCCATTGATCTCATCACACTGAACACTATTAAAGTGAATGTTTCACTGGTAGAAGAATTGATTGGATGTCTACTGAAATGTGATCCTGGTCTTTCTTGCGGAATTGTGAAGAGCTTCATTTCTCCAAGCAACTCATGTCCAAGTCACTATGTTGGTGTTTTTCAGGATTTGCCTGCTGGCACACAGTTTCCTTCATATGCAGATGATATCTCTCGGTTTATATGGAACTTTTTGGCAGACAGAACTTCTAGTTTGGCAGGTAACAGTAGCTCTTGTACTGGACAGTGCCATGATGAAGGCGAAATATGTGTAGGGGCAGAAGTGGAAGGTGGAGGCAGATGTGTTGTATCTACAACTAGATATGTCCCTGCCTATTCAACGCGGCTGAAGTTTGAGGACAATGTATGGCATGTTCTTCCAGTAAACTCTTCAGACCCTTTTAGTGCTGCAGATCCTGTGTGGACCGAAAGCTTCTGGAATACAATTGGCCTCAGGGTGTATGCAGTGCAAGCTACATCTTATGATTGGCTTGTTCTTCTGATCGGGATCATTATTACGGTGGCATCATACTTTGCAGTGATCGTTGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTAAAACATCATCCATTCCCTCCATTATTTCTGAGACCTTGGTCCATCAGATCCTACCACCAAAGCCATCTCTGTAAGGTGCTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAGTCTAACACATGAATTAAGTCGGCAAATCTTAGATGCAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAAC TA CAAAAGCCATGTGGAGCCTTCCAG CTAGAAGGAGATGTGATCC  TAC TACATGAT ACATGACACCGACCTACAGGCTGTTGTGATTTGTACTGATGTTTCTGGATCTGCTTGGCTGATTGGCTCTGCATTGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGT TATGCACGTATCATCTTTGAGTTTTGGCTG TGTACGTCTCTCCAGTCCTATT TTCCTACTGTGTTGGGACCAGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCATGTCAAGAACTGTCCCTATACAATTTTAAATAACTGAAAAGCTCAGATT              ]
[+] EMBL CB626727             [                 GGCGACGACCACTGCCTCCTCCACTCCTCCAGATCGCCGCCGCCGCCGCCATGGGGGGCGGCTCCACGGCGCCCCTCCTCGCGGCCTTCGCTTGCGTCTTCCTCGCCGTCTTCCCTCCCGTCGCCTCCGGAGATGCTGCAACGTTGGAGTCGGTTCCGGATCTTGTGAAGGCAATGTACATAAACGTTGAAAGCTTCCCTTGTGTGAGGCTGTTGAATCACTCTGGTCAAGTCGGTTGTTCTAATCCTGGGCATGACAAGGTTATTGCACCGATTGTAAGATTTGGAAACAGAAATGATCAGTTGGTTCAGCCGTCGGCGGTTCTTCTTCCCTTAAATCAGATGACAGATTTCTTTCTGAGGGTATCCAATGATCCAGAACTTTATCGTAAGATAGCTGGCGTACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGAGTTTTCACCGGATAGAAAATTTCCACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGGATCAGGTATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGACTCTGCAAAACCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGCAGAATTTGACCTCGTTATGCAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCTCAGAGAGCAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB673590             [                                                                                                                                                                                                                                                                                                                                                                                      TGAGGGTCTCTAATGATCCAGAACTTTATCGTAAGATAGCTGGCGTACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGAGTCTTCACCGGATAGAAAATTTCCACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGGATCAGGTATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGACTCTGCAAAACCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGCAGAATTTGACCTCGTTATGCAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCTCAGAGAGCAGTCATGCTTGCCTTTAGGAGGACAGAGTGTATGGACTTCGTTACCACCAATCAGCAATTCATCTACAAAGCATCAGAAACCAATAATAATGGTCACTGCATCCCAAGACTCTGCATCATTCTTTCGGGACCGTAGTCTTGGTGCTGATTCTCCCATCTCTGGATTGATTGCCTTGCTCACTGCTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGGAAATTCTTACAGGAATTAGATCAAGGGGCTGACTCTGTTAATGGCATTAGCAGCTTATTGATTGACCAGGTCTTGGAGATTGGTTCCGTTGGCAAGGCCATAAGTCAGGGATATCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB673591             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GACAGAACTTCTAGTTTGGCAGGTAACAGTAGCTCTTGTACTGGACAGTGCCATGATGAAGGCGAAATATGTGTAGGGGCAGAAGTGGAAGGTGGAGGCAGATGTGTTGTATCTACAACTAGATATGTCCCTGCCTATTCAACGCGGCTGAAGTTTGAGGACAATGTATGGCATGTTCTTCCAGTAAACTCTTCAGACCCTTTTAGTGCTGCAGATCCTGTGTGGACCGAAAGCTTCTGGAATACAATTGGCCTCAGGGTGTATGCAGTGCAAGCTACATCTTATGATTGGCTTGTTCTTCTGATCGGGATCATTATTACGGTGGCATCATACTTTGCAGTGATCGTTGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTAAAACATCATCCATTCCCTCCATTATTTCTGAGACCTTGGTCCATCAGATCCTACCACCAAAGCCATCTCTGTAAGGTGCTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAGTCTAACACATGAATTAAGTCGGCAAATCTTAGATGCAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAAC TA CAAAAGCCATGTGGAGCCTTCCAG CTAGAAGGAGATGTGATCC  TAC TACATGAT ACATGACACCGACCTACAGGCTGTTGTGATTTGTACTGATGTTTCTGGATCTGCTTGGCTGATTGGCTCTGCATTGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGT TATGCACGTATCATCTTTGAGTTaa                                                                                                                                                        ]
[-] EMBL CB626728             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAATGTATGGCATGTTCTTCCAGTAAACTCTTCAGACCCTTTTAGTGCTGCAGATCCTGTGTGGACCGAAAGCTTCTGGAATACAATTGGCCTCAGGGTGTATGCAGTGCAAGCTACATCTTATGATTGGCTTGTTCTTCTGATCGGGATCATTATTACGGTGGCATCATACTTTGCAGTGATCGTTGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTGAAACATCATCCATTCCCTCCATTATTTCTGAGACCTTGGGCCATCAGATCCTACCACCAAAGCCATCTCTGTAAGGTGCTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAGTCTAACACATGAATTAAGTCGGCAAATCTTAGATGCAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAAC TA CAAAAGCCATGTGGAGCCTTCCAG CTAGAAGGAGATGTGATCC  TAC TACATGAT ACATGACACCGACCTACAGGCTGTTGTGATTTGTACTGATGTTCCTGGATCTGCTTGGCTGATTGGCTCTGCATTGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGT TATGCACGTATCATCTTTGAGTTTTGGCTG TGTACGTCTCTCCAGTCCTATT TTCCTACTGTGTTGGGACCAGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCAAGTCAAGAACTGTCCCTATACAATTTTAAATAACTGAAAAGCTCAGATTCGCCATG       ]
[-] EMBL CA305617             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTACGGTGGCATCATACTTTGCAGTGATCGTTGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTGAAACATCATCCATTCCCTCCATTATTTCTGAGACCTTGGGCCATCAGATCCTACCACCAAAGCCATCTCTGTAAGGTGCTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAGTCTAACACATGAATTAAGTCGGCAAATCTTAGATGCAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAAC TA CAAAAGCCATGTGGAGCCTTCCAG CTAGAAGGAGATGTGATCC  TAC TACATGAT ACATGACACCGACCTACAGGCTGTT                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BQ906396             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGAAACATCATCCATTCCCTCCATTATTTCTGAGACCTTGGGCCATCAGATCCTACC CCCAAGCCATCTCTGTAAGGTGCTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAGTCTAACACATGAATTAAGTCGGCAAATCTTAGATGCAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAAC TACCAAAAGCCATGTGGAGCCTTCCAG CTAGAAGGAGATGTGATCC  TAC TACATGAT ACATGACACCGACCTACAGGCTGTTGTGATTTGTACTGATGTTCCTGGATCTGCTTGGCTGATTGGCTCTGCATTGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGTNTATGCACGTATCATCTTTGAGTTTTGGCTG TGTACGTCTCTCCAGTCCTATT TTCCTACTGTGTTGGGACCAGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCAAGTCAAGAACTGTCCCTATACAATTTTAAATAACTGAAAAGCTCAGATTCGCCAAAAAAAAAA]
[+] EMBL BI800073             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AATCTTAGATGCAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAACGTA CCAAAGCCATGTGGAGCCTTCCAGTCTAGAAGGAGATGTGATCCTGTACGTACATGATGACATGACACCGACCTACAGGCTGTTGTGATTTGTACTGATGTTCCTGGATCTGCTT GCTGATTGGCTCTGCATTGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGT TATGCACGTATCATCTTTGAGTTTTGGCTGATGTACGTCTCTCCAGTCCTATTCTTCCTACTGTGTTGGGACCCGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCAAGTCAAGAACTGTCC                                                ]




>consensus_12819#0
CGACGAGACACGAGAAAGGCGACGACCACTGCCTCCTCCACTCCTCCAGATCGCCGCCGC
CGCCGCCATGGGGGGCGGCTCCACGGCGCCCCTCCTCGCGGCCTTCGCCTGCGTCTTCCT
CGCCGTCTTCCCTCCCGTCGCCTCCGGAGATGCTGCAACGTTGGAGTCAGTTCCGGATCT
TGTGAAGGCAATGTACATAAACGTTGAAAGCTTCCCTTGTGTGAGGCTGTTGAATCACTC
TGGTCAAGTCGGTTGTTCTAATCCTGGGCATGACAAGGTTATTGCACCGATTGTAAGATT
TGGAAACAGAAATGATCAGTTGGTTCAGCCGTCGGCGGTTCTTCTTCCCTTAAATCAGAT
GACAGATTTCTTTCTGAGGGTATCCAATGATCCAGAACTTTATCGTAAGATAGCTGGCGT
ACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGAGTTTTCACCGGATAGAAAATTTCC
ACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGGATCAGG
TATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGAC
TCTGCAAAACCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGC
AGAATTTGACCTCGTTATGCAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCT
CAGAGAGCAGTCATGCTTGCCTTTAGGAGGACAGAGTGTATGGACTTCGTTACCACCAAT
CAGCAATTCATCTACAAAGCATCAGAAACCAATAATAATGGTCACTGCATCCCAAGACTC
TGCATCATTCTTTCGGGACCGTAGTCTTGGTGCTGATTCTCCCATCTCTGGATTGATTGC
CTTGCTCACTGCTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACA
GCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGGAAATTCTT
ACAGGAATTAGATCAAGGGGCTGACTCTGTTAATGGCATTAGCAGCTTATTGATTGACCA
GGTCTTGGAGATTGGTTCCGTTGGCAAGGCCATAAGTCAGGGATATCCACTATTTTATGC
GCATGCTGCAGGGAATTCGTCAATTTCGATGAAAATGGTAGATGCACTCCAAAGTGCCAG
TGAATCACTTGGTTCTGATAATGTTAAAGTAAAACCAGCAGCTTCATCAAATCCTGGTGT
TCCACCATCTTCATTAATGTCGTTCCTAGGAAAGAATTCATCAACTCCTGGACTTGTCTT
GGAGGATTTTGATTCCCAATTTTCTAATAGATTTTACCACAGCACTTTGGATGGCCCTGC
AAACGTCAATTCTTCGTCAATAGCAGCTGCTGCTGCTTTGATTGCCAGATCATTATACAT
TCTTGCTAGCGCAGACTTGCCCATTGATCTCATCACACTGAACACTATTAAAGTGAATGT
TTCACTGGTAGAAGAATTGATTGGATGTCTACTGAAATGTGATCCTGGTCTTTCTTGCGG
AATTGTGAAGAGCTTCATTTCTCCAAGCAACTCATGTCCAAGTCACTATGTTGGTGTTTT
TCAGGATTTGCCTGCTGGCACACAGTTTCCTTCATATGCAGATGATATCTCTCGGTTTAT
ATGGAACTTTTTGGCAGACAGAACTTCTAGTTTGGCAGGTAACAGTAGCTCTTGTACTGG
ACAGTGCCATGATGAAGGCGAAATATGTGTAGGGGCAGAAGTGGAAGGTGGAGGCAGATG
TGTTGTATCTACAACTAGATATGTCCCTGCCTATTCAACGCGGCTGAAGTTTGAGGACAA
TGTATGGCATGTTCTTCCAGTAAACTCTTCAGACCCTTTTAGTGCTGCAGATCCTGTGTG
GACCGAAAGCTTCTGGAATACAATTGGCCTCAGGGTGTATGCAGTGCAAGCTACATCTTA
TGATTGGCTTGTTCTTCTGATCGGGATCATTATTACGGTGGCATCATACTTTGCAGTGAT
CGTTGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTGAAACATCATCCATTCCCT
CCATTATTTCTGAGACCTTGGGCCATCAGATCCTACCACCAAAGCCATCTCTGTAAGGTG
CTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAGTCTAACACATGAATTAAGTCGGCA
AATCTTAGATGCAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAACTACAAAAGCC
ATGTGGAGCCTTCCAGCTAGAAGGAGATGTGATCCTACTACATGATACATGACACCGACC
TACAGGCTGTTGTGATTTGTACTGATGTTCCTGGATCTGCTTGGCTGATTGGCTCTGCAT
TGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGC
TGGTTATGCACGTATCATCTTTGAGTTTTGGCTGTGTACGTCTCTCCAGTCCTATTTTCC
TACTGTGTTGGGACCAGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCAAGTC
AAGAACTGTCCCTATACAATTTTAAATAACTGAAAAGCTCAGATTCGCCATGAAAAAAA

consensusID : consensus_12819#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 776
fasta sequence

                              [AGCGAGTATTCGGTTTACTCTTATTCTGTATGCTTAAATTAAGATGGCTGTCATTTTCTATCATCATTGTCAAAGGCTAGCCAACTCTGCCTTGTTAAGAGTACATGGTTATTGGGGTCTCCATTATGTAATCAGATCCTGGGCATGACAAGGTTATTGCACCGATTGTAAGATTTGGAAACAGAAATGATCAGTTGGTTCAGCCGTCGGCGGTTCTTCTTCCCTTAAATCAGATGACAGATTTCTTTCTGAGGGTATCCAATGATCCACAACTTTATCGTAAGATAGCTGGCGTACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGAGTTTTCACCGGATAGAAAATTTCCACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGGATCAGGTATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGACTCTGCAAAACCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGCAGAATTTGACCTCGTTATGCAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCTCAGAGAGCAGTCATGCTTGCCTTTAAGAGGACAGAGGGCAGTGTATGGACTTCGTTACCACCAATCAGCAATTCATCTANCAAGCATCAGAAACCAATAATAATGGTCACTGCATCCCAAGACTCTGCATCATTCTTTCGGGACCGTAGTCTTGGTGCTGATTCTCCCATCTCTGGATTGA]

[+] EMBL CB678099             [AGCGAGTATTCGGTTTACTCTTATTCTGTATGCTTAAATTAAGATGGCTGTCATTTTCTATCATCATTGTCAAAGGCTAGCCAACTCTGCCTTGTTAAGAGTACATGGTTATTGGGGTCTCCATTATGTAATCAGATCCTGGGCATGACAAGGTTATTGCACCGATTGTAAGATTTGGAAACAGAAATGATCAGTTGGTTCAGCCGTCGGCGGTTCTTCTTCCCTTAAATCAGATGACAGATTTCTTTCTGAGGGTATCCAATGATCCACAACTTTATCGTAAGATAGCTGGCGTACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGAGTTTTCACCGGATAGAAAATTTCCACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGGATCAGGTATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGACTCTGCAAAACCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGCAGAATTTGACCTCGTTATGCAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCTCAGAGAGCAGTCATGCTTGCCTTTAAGAGGACAGAGGGCAGTGTATGGACTTCGTTACCACCAATCAGCAATTCATCTANCAAGCATCAGAAACCAATAATAATGGTCACTGCATCCCAAGACTCTGCATCATTCTTTCGGGACCGTAGTCTTGGTGCTGATTCTCCCATCTCTGGATTGA]




>consensus_12819#1
AGCGAGTATTCGGTTTACTCTTATTCTGTATGCTTAAATTAAGATGGCTGTCATTTTCTA
TCATCATTGTCAAAGGCTAGCCAACTCTGCCTTGTTAAGAGTACATGGTTATTGGGGTCT
CCATTATGTAATCAGATCCTGGGCATGACAAGGTTATTGCACCGATTGTAAGATTTGGAA
ACAGAAATGATCAGTTGGTTCAGCCGTCGGCGGTTCTTCTTCCCTTAAATCAGATGACAG
ATTTCTTTCTGAGGGTATCCAATGATCCACAACTTTATCGTAAGATAGCTGGCGTACTAG
TTGAGGCAAATGGCGTTGATAACATGCTAGAGTTTTCACCGGATAGAAAATTTCCACAAC
AGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGGATCAGGTATTA
TGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGACTCTGC
AAAACCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGCAGAAT
TTGACCTCGTTATGCAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCTCAGAG
AGCAGTCATGCTTGCCTTTAAGAGGACAGAGGGCAGTGTATGGACTTCGTTACCACCAAT
CAGCAATTCATCTANCAAGCATCAGAAACCAATAATAATGGTCACTGCATCCCAAGACTC
TGCATCATTCTTTCGGGACCGTAGTCTTGGTGCTGATTCTCCCATCTCTGGATTGA

consensusID : consensus_12819#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 621
fasta sequence

                              [GAGACAATGGGGGGATCATTATTACGGTGGCATCATACTTTGCAGTGATCGTCGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTGAAACATCATCCATTCCCTCCATTATTTCTGAGACCTTGGGCCATCAGATCCTACCACCAAAGCCATCTCTGTAAGGTGCTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAGTCTAACACATGAATTAAGTCGGCAAATCTTAGATGCAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAACTACAAAAGCCATGTGGAGCCTTCCAGCTAGAAGGAGATGTGATCCTACTACATGATACATGACACCGACCTACAGGCTGTTGTGATTTGTACTGATGTTCCTGGATCTGCTTGGCTGATTGGCTCTGCATTGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGTTATGCACGTATCATCTTTGAGTTTTGGCTGTGTACGTCTCTCCAGTCCTATTTTCCTACTGTGTTGGGACCAGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCAAGTCGAGAACTGTCCCTATACAATTTTAAAAAAAAA]

[-] EMBL CA761774             [GAGACAATGGGGGGATCATTATTACGGTGGCATCATACTTTGCAGTGATCGTCGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTGAAACATCATCCATTCCCTCCATTATTTCTGAGACCTTGGGCCATCAGATCCTACCACCAAAGCCATCTCTGTAAGGTGCTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAGTCTAACACATGAATTAAGTCGGCAAATCTTAGATGCAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAACTACAAAAGCCATGTGGAGCCTTCCAGCTAGAAGGAGATGTGATCCTACTACATGATACATGACACCGACCTACAGGCTGTTGTGATTTGTACTGATGTTCCTGGATCTGCTTGGCTGATTGGCTCTGCATTGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGTTATGCACGTATCATCTTTGAGTTTTGGCTGTGTACGTCTCTCCAGTCCTATTTTCCTACTGTGTTGGGACCAGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCAAGTCGAGAACTGTCCCTATACAATTTTAAAAAAAAA]




>consensus_12819#2
GAGACAATGGGGGGATCATTATTACGGTGGCATCATACTTTGCAGTGATCGTCGGCAGAT
CATACATTTCAAAGATCATAAAGCGGGACTGAAACATCATCCATTCCCTCCATTATTTCT
GAGACCTTGGGCCATCAGATCCTACCACCAAAGCCATCTCTGTAAGGTGCTCTGGGAATT
TTGAGAGTTGGAACAGAACTAATAGTCTAACACATGAATTAAGTCGGCAAATCTTAGATG
CAATGTGGCACATGGCGATAGGGAGAGGATTTGTAAAACTACAAAAGCCATGTGGAGCCT
TCCAGCTAGAAGGAGATGTGATCCTACTACATGATACATGACACCGACCTACAGGCTGTT
GTGATTTGTACTGATGTTCCTGGATCTGCTTGGCTGATTGGCTCTGCATTGGTAGGTATA
GGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGTTATGCAC
GTATCATCTTTGAGTTTTGGCTGTGTACGTCTCTCCAGTCCTATTTTCCTACTGTGTTGG
GACCAGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCAAGTCGAGAACTGTCC
CTATACAATTTTAAAAAAAAA

consensusID : consensus_12819#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 572
fasta sequence

                              [TGGAGCCCCCTTGGGGGCCCCATTCCGGGNTCCGGTTGCCCCTCCCTTTGCCCGTTCTTGCGTGTAAAGGGTTGTCTCTGGGGAATTGTGTTGGAGGAGTTGGGGTCACAGGATACTANATAGGTCCTNAACCACATGAATTAANTCGCAATGCTTAGATGCNATGGTGGCACATGGGCGATAGGGAGAGGATTTGTGAAAACTACCAAAGCCATGTGGACCTTCCAGCTAGAAGGAGATGGTGATCCTACTACATGATGACATGGACAACCGACCTACAGGCTGTTGTGATTTGTACTGATGTTCCTGGATCTGCTTGGCTGATTGGCTCTGCTTGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGCTTATGCACGTATCATCTTTGAGTTTTGCTGTGTACGTCTCTCCAGTCCTATTTTCCTACTGTGTTGGGACCAGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCAAGTCAAGAACTGTCCCTATACATTTTAAATAACTGANNAGCTCAGATTCGCCATGTGCAAA]

[+] EMBL BM038950             [TGGAGCCCCCTTGGGGGCCCCATTCCGGGNTCCGGTTGCCCCTCCCTTTGCCCGTTCTTGCGTGTAAAGGGTTGTCTCTGGGGAATTGTGTTGGAGGAGTTGGGGTCACAGGATACTANATAGGTCCTNAACCACATGAATTAANTCGCAATGCTTAGATGCNATGGTGGCACATGGGCGATAGGGAGAGGATTTGTGAAAACTACCAAAGCCATGTGGACCTTCCAGCTAGAAGGAGATGGTGATCCTACTACATGATGACATGGACAACCGACCTACAGGCTGTTGTGATTTGTACTGATGTTCCTGGATCTGCTTGGCTGATTGGCTCTGCTTGGTAGGTATAGGTAGATGGATGATGCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGCTTATGCACGTATCATCTTTGAGTTTTGCTGTGTACGTCTCTCCAGTCCTATTTTCCTACTGTGTTGGGACCAGTTGAGTATTGTGCTGGTTTACGGAACCTTATCGATATCAAGTCAAGAACTGTCCCTATACATTTTAAATAACTGANNAGCTCAGATTCGCCATGTGCAAA]




>consensus_12819#3
TGGAGCCCCCTTGGGGGCCCCATTCCGGGNTCCGGTTGCCCCTCCCTTTGCCCGTTCTTG
CGTGTAAAGGGTTGTCTCTGGGGAATTGTGTTGGAGGAGTTGGGGTCACAGGATACTANA
TAGGTCCTNAACCACATGAATTAANTCGCAATGCTTAGATGCNATGGTGGCACATGGGCG
ATAGGGAGAGGATTTGTGAAAACTACCAAAGCCATGTGGACCTTCCAGCTAGAAGGAGAT
GGTGATCCTACTACATGATGACATGGACAACCGACCTACAGGCTGTTGTGATTTGTACTG
ATGTTCCTGGATCTGCTTGGCTGATTGGCTCTGCTTGGTAGGTATAGGTAGATGGATGAT
GCCCCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGCTTATGCACGTATCATCTTTGA
GTTTTGCTGTGTACGTCTCTCCAGTCCTATTTTCCTACTGTGTTGGGACCAGTTGAGTAT
TGTGCTGGTTTACGGAACCTTATCGATATCAAGTCAAGAACTGTCCCTATACATTTTAAA
TAACTGANNAGCTCAGATTCGCCATGTGCAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      CGACGAGACACGAGAAAGGCGACGACCACTGCCTCCTCCACTCCTCCAGATCGCCGCCGC 60
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      CGCCGCCATGGGGGGCGGCTCCACGGCGCCCCTCCTCGCGGCCTTCGCCTGCGTCTTCCT 120
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      CGCCGTCTTCCCTCCCGTCGCCTCCGGAGATGCTGCAACGTTGGAGTCAGTTCCGGATCT 180
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TGTGAAGGCAATGTACATAAACGTTGAAAGCTTCCCTTGTGTGAGGCTGTTGAATCACTC 240
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TGGTCAAGTCGGTTGTTCTAATCCTGGGCATGACAAGGTTATTGCACCGATTGTAAGATT 300
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TGGAAACAGAAATGATCAGTTGGTTCAGCCGTCGGCGGTTCTTCTTCCCTTAAATCAGAT 360
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      GACAGATTTCTTTCTGAGGGTATCCAATGATCCAGAACTTTATCGTAAGATAGCTGGCGT 420
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      ACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGAGTTTTCACCGGATAGAAAATTTCC 480
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      ACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGGATCAGG 540
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGAC 600
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TCTGCAAAACCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGC 660
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      AGAATTTGACCTCGTTATGCAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCT 720
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      CAGAGAGCAGTCATGCTTGCCTTTAGGAGGACAGAGTGTATGGACTTCGTTACCACCAAT 780
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      CAGCAATTCATCTACAAAGCATCAGAAACCAATAATAATGGTCACTGCATCCCAAGACTC 840
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TGCATCATTCTTTCGGGACCGTAGTCTTGGTGCTGATTCTCCCATCTCTGGATTGATTGC 900
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      CTTGCTCACTGCTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACA 960
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      GCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGGAAATTCTT 1020
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      ACAGGAATTAGATCAAGGGGCTGACTCTGTTAATGGCATTAGCAGCTTATTGATTGACCA 1080
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      GGTCTTGGAGATTGGTTCCGTTGGCAAGGCCATAAGTCAGGGATATCCACTATTTTATGC 1140
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      GCATGCTGCAGGGAATTCGTCAATTTCGATGAAAATGGTAGATGCACTCCAAAGTGCCAG 1200
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TGAATCACTTGGTTCTGATAATGTTAAAGTAAAACCAGCAGCTTCATCAAATCCTGGTGT 1260
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TCCACCATCTTCATTAATGTCGTTCCTAGGAAAGAATTCATCAACTCCTGGACTTGTCTT 1320
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      GGAGGATTTTGATTCCCAATTTTCTAATAGATTTTACCACAGCACTTTGGATGGCCCTGC 1380
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      AAACGTCAATTCTTCGTCAATAGCAGCTGCTGCTGCTTTGATTGCCAGATCATTATACAT 1440
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TCTTGCTAGCGCAGACTTGCCCATTGATCTCATCACACTGAACACTATTAAAGTGAATGT 1500
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TTCACTGGTAGAAGAATTGATTGGATGTCTACTGAAATGTGATCCTGGTCTTTCTTGCGG 1560
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      AATTGTGAAGAGCTTCATTTCTCCAAGCAACTCATGTCCAAGTCACTATGTTGGTGTTTT 1620
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TCAGGATTTGCCTGCTGGCACACAGTTTCCTTCATATGCAGATGATATCTCTCGGTTTAT 1680
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      ATGGAACTTTTTGGCAGACAGAACTTCTAGTTTGGCAGGTAACAGTAGCTCTTGTACTGG 1740
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      ACAGTGCCATGATGAAGGCGAAATATGTGTAGGGGCAGAAGTGGAAGGTGGAGGCAGATG 1800
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TGTTGTATCTACAACTAGATATGTCCCTGCCTATTCAACGCGGCTGAAGTTTGAGGACAA 1860
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TGTATGGCATGTTCTTCCAGTAAACTCTTCAGACCCTTTTAGTGCTGCAGATCCTGTGTG 1920
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      GACCGAAAGCTTCTGGAATACAATTGGCCTCAGGGTGTATGCAGTGCAAGCTACATCTTA 1980
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      -----------GAGACAATGGGGGGATCATTATTACGGTGGCATCATACTTTGCAGTGAT 49
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      TGATTGGCTTGTTCTTCTGATCGGGATCATTATTACGGTGGCATCATACTTTGCAGTGAT 2040
consensus_12819#1      ------------------------------------------------------------
                                                                                   

consensus_12819#2      CGTCGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTGAAA-CATCATCCATTCCC 108
consensus_12819#3      -----------------------------TGGAGCCCCCTTGGGGGCCCCATTCCGGGNT 31
consensus_12819#0      CGTTGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTGAAA-CATCATCCATTCCC 2099
consensus_12819#1      ---------------------AGCGAGTATTCGGTTTACTCTTATTCTGTATGCTTAAAT 39
                                                    *   *            *   ** *      

consensus_12819#2      TCCATTATTTCTGAGACCTTGGGCCATCAGATCCTACCACCAA--AGCCATCTCTGTAAG 166
consensus_12819#3      CCGGTTGCCCCTC---CCTTTGCCCGTTCTTGCGTGTAA--AG--GGTTGTCTCTGGGGA 84
consensus_12819#0      TCCATTATTTCTGAGACCTTGGGCCATCAGATCCTACCACCAA--AGCCATCTCTGTAAG 2157
consensus_12819#1      TAAGATGGCTGTCA--TTTTCTATCATCATTGTCAAAGGCTAGCCAACTCTGCCTTGTTA 97
                            *     *      **    * *              *        *  **     

consensus_12819#2      GTGCTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAG----TCTAACACATGAATTAA 222
consensus_12819#3      ATTGTGTTGGAGGAGTTGGGGTCACAGGATACTANATAGGTCCTNAACCACATGAATTAA 144
consensus_12819#0      GTGCTCTGGGAATTTTGAGAGTTGGAACAGAACTAATAG----TCTAACACATGAATTAA 2213
consensus_12819#1      AGAGTACATGGTTATTGGGGTCTCCATTATG-TAATCAGATCCTGGGCATGACAAGGTTA 156
                           *    *     *  *      *  *        **    *       *  *  * *

consensus_12819#2      GT-CGGCAAATCTTAGATGCAATG-TGGCACATGG-CGATAGGGAGAGGATTTGT-AAAA 278
consensus_12819#3      NT-CG-CAATGCTTAGATGCNATGGTGGCACATGGGCGATAGGGAGAGGATTTGTGAAAA 202
consensus_12819#0      GT-CGGCAAATCTTAGATGCAATG-TGGCACATGG-CGATAGGGAGAGGATTTGT-AAAA 2269
consensus_12819#1      TTGCACCGATTGTAAGATTTGGAAACAGAA-ATGATCAGTTGGTTCAGCCGTCGGCGGTT 215
                        * *  * *   * ****         * * ***  *  * **   **   * *      

consensus_12819#2      CTACAA-----AAGCCATGTGG-AGCCTTCCAGCTAGAAGGAGATG-TGATCCTACTACA 331
consensus_12819#3      CTACCA-----AAGCCATGTGG-A-CCTTCCAGCTAGAAGGAGATGGTGATCCTACTACA 255
consensus_12819#0      CTACAA-----AAGCCATGTGG-AGCCTTCCAGCTAGAAGGAGATG-TGATCCTACTACA 2322
consensus_12819#1      CTTCTTCCCTTAAATCAGATGACAGATTTCTTTCTGAGGGTATCCAATGATCC-ACAACT 274
                       ** *       **  **  **  *   ***   **    * *     ****** ** ** 

consensus_12819#2      TGAT-ACATGA--CACCGACCTACAGGCTGTTGTGATTTGTACTGATGT--TCCTGGA-- 384
consensus_12819#3      TGATGACATGGACAACCGACCTACAGGCTGTTGTGATTTGTACTGATGT--TCCTGGA-- 311
consensus_12819#0      TGAT-ACATGA--CACCGACCTACAGGCTGTTGTGATTTGTACTGATGT--TCCTGGA-- 2375
consensus_12819#1      TTATCGTAAGA-TAGCTGGCGTACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGAGT 333
                       * **   * *     * * * ***  * **  *  * * *   ****    * ** **  

consensus_12819#2      -TCTGCTTGGCTGATTGGCTCTGCA------TTGGTAGGTATAGGTAGATGGATGATGCC 437
consensus_12819#3      -TCTGCTTGGCTGATTGGCTCTGC-------TTGGTAGGTATAGGTAGATGGATGATGCC 363
consensus_12819#0      -TCTGCTTGGCTGATTGGCTCTGCA------TTGGTAGGTATAGGTAGATGGATGATGCC 2428
consensus_12819#1      TTTCACCGGATAGAAAATTTCCACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATC 393
                        *   *  *   **     **  *       **       ***   * **    *    *

consensus_12819#2      --------CCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGG-TTATGCACGTATCATC 488
consensus_12819#3      --------CCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGGCTTATGCACGTATCATC 415
consensus_12819#0      --------CCTCTGGGAGGATGTATGCTGTGGATTAGTGCTGG-TTATGCACGTATCATC 2479
consensus_12819#1      ATTGGAATCCCACGGGATCAGGTATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTC 453
                               **   ****  * ****  ******  *    **  **      ** ** **

consensus_12819#2      TTTGAGTTTTGGCTGTGTACGTCTCTCCAGTCCTATTTTCCTACTGTGTTGGGACCAGT- 547
consensus_12819#3      TTTGAGTTTTG-CTGTGTACGTCTCTCCAGTCCTATTTTCCTACTGTGTTGGGACCAGT- 473
consensus_12819#0      TTTGAGTTTTGGCTGTGTACGTCTCTCCAGTCCTATTTTCCTACTGTGTTGGGACCAGT- 2538
consensus_12819#1      TCTCAGAGGAGAGCACACAGACTCTGCAAAACCTTGCGGACAAGAATGAGAAGAGTGCCA 513
                       * * **    *       *       * *  ***      * *   **    **      

consensus_12819#2      -TGAGTATTGTGCTGGT-TTACGGAACCTTA--TCGATATCAAGTCGAGAACTGTCCCTA 603
consensus_12819#3      -TGAGTATTGTGCTGGT-TTACGGAACCTTA--TCGATATCAAGTCAAGAACTGTCCCTA 529
consensus_12819#0      -TGAGTATTGTGCTGGT-TTACGGAACCTTA--TCGATATCAAGTCAAGAACTGTCCCTA 2594
consensus_12819#1      ATGGATATCTAGCAAATGTTGCAGAATTTGACCTCGTTATGCAGACAACAAAAGCTGGGA 573
                        **  ***   **   * ** * ***  * *  *** ***  ** * * **  *     *

consensus_12819#2      TACA-ATTTTAAAAAAAAA----------------------------------------- 621
consensus_12819#3      TACA-TTTTAAATAACTGANNAGCTCAGATTCGCCATGTGCAAA---------------- 572
consensus_12819#0      TACAATTTTAAATAACTGAAAAGCTCAGATTCGCCATGAAAAAAA--------------- 2639
consensus_12819#1      CGCATGATTCAGAGTCCTGCCT-CAGAGAGCAGTCATGCTTGCCTTTAAGAGGACAGAGG 632
                         **   ** *                                                 

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      ------------------------------------------------------------
consensus_12819#1      GCAGTGTATGGACTTCGTTACCACCAATCAGCAATTCATCTANCAAGCATCAGAAACCAA 692
                                                                                   

consensus_12819#2      ------------------------------------------------------------
consensus_12819#3      ------------------------------------------------------------
consensus_12819#0      ------------------------------------------------------------
consensus_12819#1      TAATAATGGTCACTGCATCCCAAGACTCTGCATCATTCTTTCGGGACCGTAGTCTTGGTG 752
                                                                                   

consensus_12819#2      ------------------------
consensus_12819#3      ------------------------
consensus_12819#0      ------------------------
consensus_12819#1      CTGATTCTCCCATCTCTGGATTGA 776