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Oryza sativa
cluster # 12820 cluster # 12820       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12820#0 length = 1346 sequences # 7  
consensus_12820#1 length = 843 sequences # 2  
consensus_12820#2 length = 539 sequences # 2  

consensusID : consensus_12820#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1346
fasta sequence
                              [GTCAACCACAACCATCCGTTCGATTGATCGATCCTTCCAAACCCTAGCTTAGTCGTTGACTCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTACGCTTCAACCCGTGGCGTGCGGCGGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACTCCTGCTACAACAAGGGGAGCTACGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAACTCGACCCCAGCGACATCTCCTTCTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGACAGTACCAGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGGAGCATCTCGCCGACTGCGCCGCGGATTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGCTGGAAACGTGCCACAGCGAGGAGGCGCAGATTAGGCTGAAGGGGGCGTTGTTCATGAGGGAGCAGTACGAGGAACTCAAAAGCCAAAAACTTGAATGTGGTGCTTATCCAACTTACACGCAGCATCTTTACCCCGCAAGACTTGAAGAGCGCATTAACATGGATAAAACCAGGCTCAACACCTTGTTGAAGCATGCAACAAAAGAACTACAAAAAAATGAGGACAAATTATCCGAGGAGCGCTCAAGACGGAAGGAATACGAAGACATGGTCATGGCAATTCAAGCCTCGATTGAACAACTTACAATGAATCACGATGCAGAACTTAAGTCAGTCCGGGAGGATAAAGCGAATCTAGAATGTCAACTCTTACAATGCACAGAGAAACTTGAACGGCTACAATCCATCTTAAACCGCGAACCGCCATTCACCTGTCCTATATTTCTGCATGTCATGGAGGATCCTTACATTACAGCGGATGGACACACCTACGACGGTGAGGCGATCAGGGCATGGCTCGACGCTGGGCATGACACATCTCCAGTTACCAACTTGCCTCTTGAACACATGGAACTCATTCCCAATCGCGCACTCCGTTCTGCTATTGTGTGGTGGCACGAACAGCAGAACGCGGCACGCGAACACCGCGACAT-GGCGTGAACTACAACTCGGCGTTTCATATTGTAAAATTCTTAATTGTTGTCTGTACTTTTGAACAATTTTTT-GCTGTCTGTAGTTACTTGTTAGCCATGTTTATAACACACAGGTTGAAATTGTAGGCTGTTAGTATGCCTTGTACACACAGGTCGATATAATTCATGCCAGAATGCAACATAAACACAGCATTCAGTAAAAAAAAAAATAATCAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF294635             [GTCAACCACAACCATCCGTTCGATTGATCGATCCTTCCAAACCCTAGCTTAGTCGTTGACTCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTACGCTTCAACCCGTGGCGTGCGGCGGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACTCCTGCTACAACAAGGGGAGCTACGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAACTCGACCCCAGCGACATCTCCTTCTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGACAGTACCAGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGGAGCATCTCGCCGACTGCGCCGCGGATTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGCTGGAAACGTGCCACAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK063418             [  CAACCACAACCATCCGTTCGATTGATCGATCCTTCCAAACCCTAGCTTAGTCGTTGACTCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTACGCTTCAACCCGTGGCGTGCGGCGGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACTCCTGCTACAACAAGGGGAGCTACGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAACTCGACCCCAGCGACATCTCCTTCTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGACAGTACCAGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGGAGCATCTCGCCGACTGCGCCGCGGATTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGCTGGAAACGTGCCACAGCGAGGAGGCGCAGATTAGGCTGAAGGGGGCGTTGTTCATGAGGGAGCAGTACGAGGAACTCAAAAGCCAAAAACTTGAATGTGGTGCTTATCCAACTTACACGCAGCATCTTTACCCCGCAAGACTTGAAGAGCGCATTAACATGGATAAAACCAGGCTCAACACCTTGTTGAAGCATGCAACAAAAGAACTACAAAAAAATGAGGACAAATTATCCGAGGAGCGCTCAAGACGGAAGGAATACGAAGACATGGTCATGGCAATTCAAGCCTCGATTGAACAACTTACAATGAATCACGATGCAGAACTTAAGTCAGTCCGGGAGGATAAAGCGAATCTAGAATGTCAACTCTTACAATGCACAGAGAAACTTGAACGGCTACAATCCATCTTAAACCGCGAACCGCCATTCACCTGTCCTATATTTCTGCATGTCATGGAGGATCCTTACATTACAGCGGATGGACACACCTACGACGGTGAGGCGATCAGGGCATGGCTCGACGCTGGGCATGACACATCTCCAGTTACCAACTTGCCTCTTGAACACATGGAACTCATTCCCAATCGCGCACTCCGTTCTGCTATTGTGTGGTGGCACGAACAGCAGAACGCGGCACGCGAACACCGCGACAT GGCGTGAACTACAACTCGGCGTTTCATATTGTAAAATTCTTAATTGTTGTCTGTACTTTTGAACAATTTTTT GCTGTCTGTAGTTACTTGTTAGCCATGTTTATAACACACAGGTTGAAATTGTAGGCTGTTAGTATGCCTTGTACACACAGGTCGATATAATTCATGCCAGAATGCAACATAAACAC                                                ]
[+] EMBL CF306389             [         AACCATCCGTTCGATTGATCGATCCTTCCAAACCCTAGCTTAGTCGTTGACTCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTACGCTTCAACCCGTGGCGTGCGGCGGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACTCCTGCTACAACAAGGGGAGCTACGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAACTCGACCCCAGCGACATCTCCTTCTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGACAGTACCAGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGGAGCATCTCGCCGACTGCGCCGCGGATTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGCTGGAAACGTGCCACAGCGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C73147               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATTGAACAACTTACAATGAATCACGATGCAGAACTTAAGTCAGTCCGGGAGGATAAAGCGAATCTAGAATGTCAACTCTTACAATGCACAGAGAAACTTGAACGGCTACAATCCATCTTAAACCGCGAACCGCCATTCACCTGTCCTATATTTCTGCATGTCATGGAGGATCCTTACATTACAGCGGATGGACACACCTACGACGGTGAGGCGATCAGGGCATGGCTCGACGCTGGGCATGACACATCTCCAGTTACCAACTTGCCTCTTGAACACATGGAACTCATTCCCAATCGCGCACTCCGTTCTGCTATTGTGTGGTGGCACGAACAGCAGAACGCGGCACGGAAACACCGCGACATGGGCGTGAACTACAACTCGGCGTTTCATATTGTAAAATTCTTAATTGTTGTCTGTACTTTTGAACAATTTTTTGGCTGTCTGTAGTTA                                                                                                                                                      ]
[-] EMBL CF294636             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACCTACGACGGTGAGGCGATCAGGGCATGGCTCGACGCTGGGCATGACACATCTCCAGTTACCAACTTGCCTCTTGAACACATGGAACTCATTCCCAATCGCGCACTCCGTTTTGCTATTGTGTGGTGGCACGAACAGCAGAACGCGGCACGCGAACACCGCGACAT GGCGTGAACTACAACTCGGCGTTTCATATTGTAAAATTCTTAATTGTTGTCTGTACTTTTAAACAATTTTTT GCTGTCTGTAGTTACTTGTTAGCCATGTTTATAACACACAGGTTGAAATTGTAGGCTGTTAGTATGCCTTGTACACACAGGTCGATATAATTCATGCCAGAATGCAACATAAACAAAGCATTCAGTAAAAAAAAAAA                           ]
[+] EMBL CA765281             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATCTCCAGTTACNAACTTGCCTCTTGAACACATGGAACTCATTCCCAATCGCGCACTCCGTTCTGCTATTGTGTGGTGGCACGAACAGCAGAACGCGGCACGCGAACACCGCGACAT GGCGTGAACTACAACTCGGCGTTTCATATTGTAAAATTCTTAATTGTTGTCTGTACTTTTGAACAATTTTTT GCTGTCTGTAGATACTTGTTAGCCATGTTTATAACACACAGGTTGAAATTGTAGGCTGTTAGTATGCCTTGTACACACAGGTCGAGATAATTCATGCCAGAATGCAACATAAACACAGCATTCAGT                                      ]
[+] EMBL AU075414             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GANCNGCAGAACGCGGCACGCGAACACCGCGACAT GGCGTGAACTACAACTCGGCGTTTCATATTGTAAAATTCTTAATTGTTGCCTGTNCTTTTGAACAATTTTTT GCTGNCTGTAGTTACTTGTTAGCCATGTTTATAACACACAGGTTGAAATTGTAGGCTGTTAGTATGCCTTNTACACACAGGTCGATATAATTCATGCCAGAATGCAACATAAACACAGCATTCAGTAAAACAGCTCTTAATCAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12820#0 GTCAACCACAACCATCCGTTCGATTGATCGATCCTTCCAAACCCTAGCTTAGTCGTTGAC TCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTACGCTTCAACCCGTGGCGTGCGGC GGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACTCCTGCTACAACAAGGGGAGCTA CGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAACTCGACCCCAGCGACATCTCCTT CTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGACAGTACCAGGAGTGCGTGAGGGA CTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGCT GATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGGAGCATCTCGCCGACTGCGCCGC GGATTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGCTGGAAACGTGCCACAGCGAGGA GGCGCAGATTAGGCTGAAGGGGGCGTTGTTCATGAGGGAGCAGTACGAGGAACTCAAAAG CCAAAAACTTGAATGTGGTGCTTATCCAACTTACACGCAGCATCTTTACCCCGCAAGACT TGAAGAGCGCATTAACATGGATAAAACCAGGCTCAACACCTTGTTGAAGCATGCAACAAA AGAACTACAAAAAAATGAGGACAAATTATCCGAGGAGCGCTCAAGACGGAAGGAATACGA AGACATGGTCATGGCAATTCAAGCCTCGATTGAACAACTTACAATGAATCACGATGCAGA ACTTAAGTCAGTCCGGGAGGATAAAGCGAATCTAGAATGTCAACTCTTACAATGCACAGA GAAACTTGAACGGCTACAATCCATCTTAAACCGCGAACCGCCATTCACCTGTCCTATATT TCTGCATGTCATGGAGGATCCTTACATTACAGCGGATGGACACACCTACGACGGTGAGGC GATCAGGGCATGGCTCGACGCTGGGCATGACACATCTCCAGTTACCAACTTGCCTCTTGA ACACATGGAACTCATTCCCAATCGCGCACTCCGTTCTGCTATTGTGTGGTGGCACGAACA GCAGAACGCGGCACGCGAACACCGCGACATGGCGTGAACTACAACTCGGCGTTTCATATT GTAAAATTCTTAATTGTTGTCTGTACTTTTGAACAATTTTTTGCTGTCTGTAGTTACTTG TTAGCCATGTTTATAACACACAGGTTGAAATTGTAGGCTGTTAGTATGCCTTGTACACAC AGGTCGATATAATTCATGCCAGAATGCAACATAAACACAGCATTCAGTAAAAAAAAAAAT AATCAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12820#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 843
fasta sequence
                              [TTCGGGAAAGCTCTATCGGGCCCTTCATGTACAATGTACCGTCCGAATCTCAAAGCTCCGAACGTTCGACGAGCTTCGGGAAAGAACGAATCGTTCGCACCGGTTATAAATAGTGTGCTGCGAACGTTCACTCTCACAACCAGTCAACCACAACCATCCGTTCGATTGATCGATCCTTCCAAACCCTAGCTTAGTCGTTGACTCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTACGCTTCAACCCGTGGCGTGCGGCGGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACTCCTGCTACAACAAGGGGAGCTACGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAACTCGACCCCAGCGACATCTCCTTCTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGACAGTACCAGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTANGCGCTGGAGCATGTGGCCGACTGCGCCGTGGATTACGAGCCAGTGATCCTGCTGCTGGGGGGGGCGCTGGAGACGTCGGCGGTGTGGATGTGTTCGATGGCCTGAAGGGGTCTGCGGTGTGCGGCTATGGCTGGGGGTACGCGGGGCTACCCCTGTTGGAGGCGTGGTGTCACGTGCTCGGCTCTGCGGTCACCGGGGGTTTGCGGTTTGGGACCACTTTAGCATTGTTGCGNGCGTTGGGGGAGTCGCCTTTCGACCAGCGGTGGTGTCGCCACTGAGGGTGGTTCGGCGAGGGCTGGCGGTTCGCGGG]

[+] EMBL CA758128             [TTCGGGAAAGCTCTATCGGGCCCTTCATGTACAATGTACCGTCCGAATCTCAAAGCTCCGAACGTTCGACGAGCTTCGGGAAAGAACGAATCGTTCGCACCGGTTATAAATAGTGTGCTGCGAACGTTCACTCTCACAACCAGTCAACCACAACCATCCGTTCGATTGATCGATCCTTCCAAACCCTAGCTTAGTCGTTGACTCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTACGCTTCAACCCGTGGCGTGCGGCGGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACTCCTGCTACAACAAGGGGAGCTACGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAACTCGACCCCAGCGACATCTCCTTCTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGACAGTACCAGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTANGCGCTGGAGCATGTGGCCGACTGCGCCGTGGATTACGAGCCAGTGATCCTGCTGCTGGGGGGGGCGCTGGAGACGTCGGCGGTGTGGATGTGTTCGATGGCCTGAAGGGGTCTGCGGTGTGCGGCTATGGCTGGGGGTACGCGGGGCTACCCCTGTTGGAGGCGTGGTGTCACGTGCTCGGCTCTGCGGTCACCGGGGGTTTGCGGTTTGGGACCACTTTAGCATTGTTGCGNGCGTTGGGGGAGTCGCCTTTCGACCAGCGGTGGTGTCGCCACTGAGGGTGGTTCGGCGAGGGCTGGCGGTTCGCGGG]
[+] EMBL CF305746             [                                                                                                                                                     gCAACCATCCGTTCGATTGATCGATCCTTCCAAACCCTAGCTTAGTCGTTGACTCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTACGCTTCAACCCGTGGCGTGCGGCGGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACTCCTGCTACAACAAGGGGAGCTACGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAACTCGACCCCAGCGACATCTCCTTCTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGACAGTACCAGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGC                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_12820#1 TTCGGGAAAGCTCTATCGGGCCCTTCATGTACAATGTACCGTCCGAATCTCAAAGCTCCG AACGTTCGACGAGCTTCGGGAAAGAACGAATCGTTCGCACCGGTTATAAATAGTGTGCTG CGAACGTTCACTCTCACAACCAGTCAACCACAACCATCCGTTCGATTGATCGATCCTTCC AAACCCTAGCTTAGTCGTTGACTCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTAC GCTTCAACCCGTGGCGTGCGGCGGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACT CCTGCTACAACAAGGGGAGCTACGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAAC TCGACCCCAGCGACATCTCCTTCTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGAC AGTACCAGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCT CCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTANGCGCTGG AGCATGTGGCCGACTGCGCCGTGGATTACGAGCCAGTGATCCTGCTGCTGGGGGGGGCGC TGGAGACGTCGGCGGTGTGGATGTGTTCGATGGCCTGAAGGGGTCTGCGGTGTGCGGCTA TGGCTGGGGGTACGCGGGGCTACCCCTGTTGGAGGCGTGGTGTCACGTGCTCGGCTCTGC GGTCACCGGGGGTTTGCGGTTTGGGACCACTTTAGCATTGTTGCGNGCGTTGGGGGAGTC GCCTTTCGACCAGCGGTGGTGTCGCCACTGAGGGTGGTTCGGCGAGGGCTGGCGGTTCGC GGG



consensusID : consensus_12820#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 539
fasta sequence
                              [AGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGGAGCATCTCGCCGACTGCGCCGCGGATTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGCTGGAAACGTGCCACAGCGAGGAGGCGCAGATTAGGCTGAAGGGGGCGTTGTTCATGAGGGAGCAGTACGAGGAACTCAAAAGTATGGACTTTCATTTCCTCTGCTTTATCAGTATACGAAGCCAGTTGATTACTGTGCACATTGATCGATTTTCCTTGTATTTTCAAGATATATTCCTCCCTGACATATGGTCATTGAATGATCTACTACCTCCGACCCATAAAAAAAAGACCAGTACTGAATGTAATATATCATAGTACTACGAAAATCTCTGTCTAGATTTAGATTTATTATGCTAGAATATGTCATATCTAATTATATATTTGGTTTTTTTTGAGACGGAGGGAGTAGATACCACTTTACCC]

[+] EMBL CF303031             [AGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGGAGCATCTCGCCGACTGCGCCGCGGATTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGCTGGAAACGTGCCACAGCGAGGAGGCGCAGATTAGGCTGAAGGGGGCGTTGTTCATGAGGGAGCAGTACGAGGAACTCAAAAGTATGGACTTTCATTTCCTCTGCTTTATCAGTATACGAAGCCAGTTGATTACTGTGCACATTGATCGATTTTCCTTGTATTTTCAAGATATATTCCTCCCTGACATATGGTCATTGAATGATCTACTACCTCCGACCCATAAAAAAAAGACCAGTACTGAATGTAATATATCATAGTACTACGAAAATCTCTGTCTAGATTTAGATTTATTATGCTAGAATATGTCATATCTAATTATATATTTGGTTTTTTTTGAGACGGAGGGAGTAGATACCACTTTACCC]
[+] EMBL CF303481             [                     ACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGGAGCATCTCGCCGACTGC TCTCGTANTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGCTGTTTTTTTGCCACAGCGAGGAGGCGCAGATTAGGCTGAAGGGGGCGTTGTTCATGAGGGACCACTCCGAGGAACTCAAAAGTATGGACTTTCATTTCCTCTGCTTTATCAGTATACGAAGCCAGTTGATTACTGTGCACATTGATCGATTTTCCTTGTATTTTCAAGATATATTCCTCCCTGACATATGGTCATTGAATGATCTACTACCTCCGACCCATAAAAAAAAGACCAGTACTGAATGTAATATATCATAGTACTAC                                                                                                      ]


>consensus_12820#2 AGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCTCCGGCA GCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGGAGCATC TCGCCGACTGCGCCGCGGATTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGCTGGAAA CGTGCCACAGCGAGGAGGCGCAGATTAGGCTGAAGGGGGCGTTGTTCATGAGGGAGCAGT ACGAGGAACTCAAAAGTATGGACTTTCATTTCCTCTGCTTTATCAGTATACGAAGCCAGT TGATTACTGTGCACATTGATCGATTTTCCTTGTATTTTCAAGATATATTCCTCCCTGACA TATGGTCATTGAATGATCTACTACCTCCGACCCATAAAAAAAAGACCAGTACTGAATGTA ATATATCATAGTACTACGAAAATCTCTGTCTAGATTTAGATTTATTATGCTAGAATATGT CATATCTAATTATATATTTGGTTTTTTTTGAGACGGAGGGAGTAGATACCACTTTACCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12820#0      ------------------------------------------------------------
consensus_12820#1      TTCGGGAAAGCTCTATCGGGCCCTTCATGTACAATGTACCGTCCGAATCTCAAAGCTCCG 60
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      ------------------------------------------------------------
consensus_12820#1      AACGTTCGACGAGCTTCGGGAAAGAACGAATCGTTCGCACCGGTTATAAATAGTGTGCTG 120
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      ----------------------GTCAACCACAACCATCCGTTCGATTGATCGATCCTTCC 38
consensus_12820#1      CGAACGTTCACTCTCACAACCAGTCAACCACAACCATCCGTTCGATTGATCGATCCTTCC 180
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      AAACCCTAGCTTAGTCGTTGACTCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTAC 98
consensus_12820#1      AAACCCTAGCTTAGTCGTTGACTCCTGCGCCGTCCGGTGAGCCAGCCATGTCTCCCGTAC 240
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      GCTTCAACCCGTGGCGTGCGGCGGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACT 158
consensus_12820#1      GCTTCAACCCGTGGCGTGCGGCGGAGGCGGAGGTGCAAGGTGTGAAGAGGAAAGGTGACT 300
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      CCTGCTACAACAAGGGGAGCTACGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAAC 218
consensus_12820#1      CCTGCTACAACAAGGGGAGCTACGGGAAGGCCATCAAGCACTACACCCGCGGCGCCGAAC 360
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      TCGACCCCAGCGACATCTCCTTCTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGAC 278
consensus_12820#1      TCGACCCCAGCGACATCTCCTTCTTGATCAAGCGAGCCAAAGCCCTATCGGGCCTGGGAC 420
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      AGTACCAGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCT 338
consensus_12820#1      AGTACCAGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCT 480
consensus_12820#2      ------AGGAGTGCGTGAGGGACTGCAACGACGCGCTGAGGAGGGGCGAGGAGCTCGGCT 54
                             ******************************************************

consensus_12820#0      CCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGG 398
consensus_12820#1      CCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTANGCGCTGG 540
consensus_12820#2      CCGGCAGCTCCGGCAACAAGCTGATCTCGGAGGCGCTGTTGTGGAAGGCGTCGGCGCTGG 114
                       ***************************************************  *******

consensus_12820#0      AGCATCTCGCCGACTGCGCCGCGGATTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGC 458
consensus_12820#1      AGCATGTGGCCGACTGCGCCGTGGATTACGAGCCAGTGATCCTGCTGCTGGGGGGGGCGC 600
consensus_12820#2      AGCATCTCGCCGACTGCGCCGCGGATTACGAGCAGGTGATCCTGCTGCTGCGGCGGTCGC 174
                       ***** * ************* ***********  *************** ** ** ***

consensus_12820#0      TGGAAACGTGCCACAGCGAGGAGGCGCAGATTAGGCTGAAGGGGGCGTTGTTCATGAGGG 518
consensus_12820#1      TGGAGACGT-CGGCGGTGTGGATGTGTTCGATGGCCTGAAGGGGTCTGCGGT-GTGCGGC 658
consensus_12820#2      TGGAAACGTGCCACAGCGAGGAGGCGCAGATTAGGCTGAAGGGGGCGTTGTTCATGAGGG 234
                       **** **** *  * * * *** * *     * * ********* *   * *  ** ** 

consensus_12820#0      AGCAGTACGAGGAACTCAAAAGCCAAAAACTTGAATGTGGTGCTTATCCAACTTACACGC 578
consensus_12820#1      TATGGCTGGGGGTACGCGGGGCT---ACCCCTGTTGGAGGCG-TGGTGTCACGTGCTCG- 713
consensus_12820#2      AGCAGTACGAGGAACTCAAAAGTATGGACTTTCATTTCCTCTGCTTTATCA-GTATACGA 293
                           *   * ** ** *              *              *   *  *   ** 

consensus_12820#0      AGCATCTTTACCCCGCAAGAC-TTGAAGAGCGCATTAACATGGATAAAACCAGGCTCAAC 637
consensus_12820#1      -GCTCTGCGGTCACCGGGGGT-TTG-----CGGTTTGGGACCACTTTAGCATTGTTGCGN 766
consensus_12820#2      AGCCAGTTGATTACTGTGCACATTGATCGATTTTCCTTGTATTTTCAAGATATATTCCTC 353
                        **          *        ***                   *  *       *    

consensus_12820#0      ACCTTGTTGAAGCATGCAACAAAAGAACTACAAAAAAATGAGGACAAATTATCCGAGGAG 697
consensus_12820#1      GCGTTGGGGGAGTCGCCTTTCGACCAGCGGTGGTGTCGCCACTGAGGGTGGTTCGGCGAG 826
consensus_12820#2      CCTGACATATGGTCATTGAATGATCTACTACCTCCGACCCATAAAAAAAAGACCAGTACT 413
                        *         *          *    *            *            *      

consensus_12820#0      CGCTCAAGACGGAAGGAATACGAAGACATGGTCATGGCAATTCAAGCCTCGATTGAACAA 757
consensus_12820#1      GGCTGGCGGTTCGCGGG------------------------------------------- 843
consensus_12820#2      GAATGTAATATATCATAGTACTACGAAAATCTCTGTCTAGATTTAGATTTATTATGCTAG 473
                          *                                                        

consensus_12820#0      CTTACAATGAATCACGATGCAGAACTTAAGTCAGTCCGGGAGGATAAAGCGAATCTAGAA 817
consensus_12820#1      ------------------------------------------------------------
consensus_12820#2      AATATGTCATATCTAATTATATATTTGGTTTTTTTTGAGACGGAGGGAGTAGATACCACT 533
                                                                                   

consensus_12820#0      TGTCAACTCTTACAATGCACAGAGAAACTTGAACGGCTACAATCCATCTTAAACCGCGAA 877
consensus_12820#1      ------------------------------------------------------------
consensus_12820#2      TTACCC------------------------------------------------------ 539
                                                                                   

consensus_12820#0      CCGCCATTCACCTGTCCTATATTTCTGCATGTCATGGAGGATCCTTACATTACAGCGGAT 937
consensus_12820#1      ------------------------------------------------------------
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      GGACACACCTACGACGGTGAGGCGATCAGGGCATGGCTCGACGCTGGGCATGACACATCT 997
consensus_12820#1      ------------------------------------------------------------
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      CCAGTTACCAACTTGCCTCTTGAACACATGGAACTCATTCCCAATCGCGCACTCCGTTCT 1057
consensus_12820#1      ------------------------------------------------------------
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      GCTATTGTGTGGTGGCACGAACAGCAGAACGCGGCACGCGAACACCGCGACATGGCGTGA 1117
consensus_12820#1      ------------------------------------------------------------
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      ACTACAACTCGGCGTTTCATATTGTAAAATTCTTAATTGTTGTCTGTACTTTTGAACAAT 1177
consensus_12820#1      ------------------------------------------------------------
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      TTTTTGCTGTCTGTAGTTACTTGTTAGCCATGTTTATAACACACAGGTTGAAATTGTAGG 1237
consensus_12820#1      ------------------------------------------------------------
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      CTGTTAGTATGCCTTGTACACACAGGTCGATATAATTCATGCCAGAATGCAACATAAACA 1297
consensus_12820#1      ------------------------------------------------------------
consensus_12820#2      ------------------------------------------------------------
                                                                                   

consensus_12820#0      CAGCATTCAGTAAAAAAAAAAATAATCAAAAAAAAAAAAAAAAAAAAAA 1346
consensus_12820#1      -------------------------------------------------
consensus_12820#2      -------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)