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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1283 cluster # 1283       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1283#0 length = 620 sequences # 2  

consensusID : consensus_1283#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 620
fasta sequence
                              [CTTCTTTGCCGGCCGGCCTCGATCCAGTCCTATAAGAAGCGAGGAGGACCCGAAGGCTATGCATTGCGCTCATCATCTCAAAAGCTCTTCTTCTTCTCCTTAGTTGATTTCATCTTCAGTTGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATCTAGCTGCAGCTGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAAGAGCAGCAGCACCAAGACCACCGTCGTGCCTGGGTGTGGCGCCGGAGAAGAAGGCGCAGCAGTTTGAGGCGGCCGCAGAGTCCGGCGAGACCGCCCATGGCTGCAGCTGCGGTTCCAGCTGCAGGTGCAACCCTTGCAACTGCTAAGATGCCTGCCTGCATCTACCATCTATCATGTGTGCGTGTGAATTGTGATGCAGAAAAATAAAGAAGCTTGGCCATTTGGGTTGGTGCTTGACCAATATATATGGGGTGTGTGTGTGTGTGTGATGGGTTAATCGATGTGCTATGTTATTGGTTTCACTATTCACGTACTATGCTTGTAATGGTGTATCCACAGATGAAGTGATGAATATATTACACTGGTTTGGCTAAAACCCCCGCAGACCGG]

[+] EMBL CF316370             [CTTCTTTGCCGGCCGGCCTCGATCCAGTCCTATAAGAAGCGAGGAGGACCCGAAGGCTATGCATTGCGCTCATCATCTCAAAAGCTCTTCTTCTTCTCCTTAGTTGATTTCATCTTCAGTTGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATCTAGCTGCAGCTGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAAGAGCAGCAGCACCAAGACCACCGTCGTGCCTGGG                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB679466             [                                                                                        TCTCCTTCTCCTTAGTTGATTTCATCTTCAGTTGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATCTAGCTGCAGCTGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAAGAGCAGCAGCACCAAGGCCACCGTCGTG CTGGGTGTGGCGCCGGAGAAGAAGGCGCAGCAGTTTGAGGCGGCCGCAGAGTCCGGCGAGACCGCCCATGGCTGCAGCTGCGGTTCCAGCTGCAGGTGCAACCCTTGCAACTGCTAAGATGCCTGCCTGCATCTACCATCTATCATGTGTGCGTGTGAATTGTGATGCAGAAAAATAAAGAAGCTTGGCCATTTGGGTTGGTGCTTGACCAATATATATGGGGTGTGTGTGTGTGTGTGATGGGTTAATCGATGTGCTATGTTATTGGTTTCACTATTCACGTACTATGCTTGTAATGGTGTATCCACAGATGAAGTGATGAATATATTACACTGGTTTGGCTAAAACCCCCGCAGACCGG]


>consensus_1283#0 CTTCTTTGCCGGCCGGCCTCGATCCAGTCCTATAAGAAGCGAGGAGGACCCGAAGGCTAT GCATTGCGCTCATCATCTCAAAAGCTCTTCTTCTTCTCCTTAGTTGATTTCATCTTCAGT TGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATCTAGCTGCAGC TGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAAGAGCAGCAGC ACCAAGACCACCGTCGTGCCTGGGTGTGGCGCCGGAGAAGAAGGCGCAGCAGTTTGAGGC GGCCGCAGAGTCCGGCGAGACCGCCCATGGCTGCAGCTGCGGTTCCAGCTGCAGGTGCAA CCCTTGCAACTGCTAAGATGCCTGCCTGCATCTACCATCTATCATGTGTGCGTGTGAATT GTGATGCAGAAAAATAAAGAAGCTTGGCCATTTGGGTTGGTGCTTGACCAATATATATGG GGTGTGTGTGTGTGTGTGATGGGTTAATCGATGTGCTATGTTATTGGTTTCACTATTCAC GTACTATGCTTGTAATGGTGTATCCACAGATGAAGTGATGAATATATTACACTGGTTTGG CTAAAACCCCCGCAGACCGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)