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Oryza sativa
cluster # 12830 cluster # 12830       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12830#0 length = 1725 sequences # 10  
consensus_12830#1 length = 228 sequences # 1  

consensusID : consensus_12830#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1725
fasta sequence
                              [AAACATCGCGTTATCCTTCCCTCCTCTCGCCTCGGTGGTGTGCGTCTTCCCCACCCACCCCCAGTCTCCAATAGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGA-TTGATGGTTCTCTGCAACTGTTGGTGGAG-CT-AGGTTCAGCAGCTATGTTCGCGAGT-GTATTAGCGCTCTTTTGGCGGT-G-CTGGGTAGTAGAA-TGTAGAATCGTTTCTTGTTGATTCCCT-GAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACAGGGGGTCGTTTT-GCTACTTT-G-CCGCCGAT-GTT-GTA-GGGTGTGTAGACAGACTGTAGATGAATAATGTCAGT-AACACCTGTGGGGGGTTCAG-TG-CTAGTGGGCTGCAAAACTTGAGCACT-GC-TTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGCACAGGCAGGTAATAATTTCGTAATAGAGCATAAACAATTTGTGACCTTAGGTGCGAAGAACATAAAGCTGACCAAGGTGAAGTAATATTGATGCATTGTGCGCTG]

[+] EMBL AK068855             [AAACATCGCGTTATCCTTCCCTCCTCTCGCCTCGGTGGTGTGCGTCTTCCCCACCCACCCCCAGTCTCCAATAGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGA TTGATGGTTCTCTGCAACTGTTGGTGGAG CT AGGTTCAGCAGCTATGTTCGCGAGT GTATTAGCGCTCTTTTGGCGGT G CTGGGTAGTAGAA TGTAGAATCGTTTCTTGTTGATTCCCT GAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACAGGGGGTCGTTTT GCTACTTT G CCGCCGAT GTT GTA GGGTGTGTAGACAGACTGTAGATGAATAATGTCAGT AACACCTGTGGGGGGTTCAG TG CTAGTGGGCTGCAAAACTTGAGCACT GC TTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGCACAGGCAGGTAATAATTTCGTAATAGAGCATAA                                                                        ]
[+] EMBL AK099004             [                                                CCCCACCCACCCCCAGTCTCCAATGGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCAGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGA TTGATGGTTCTCTGCAACTGTTGGTGGAG CT AGGTTCAGCAGCTATGTTCGCGAGT GTATTAGCGCTCTTTTGGCGGT G CTGGGTAGTAGAA TGTAGAATCGTTTCTTGTTGATTCCCT GAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACAGGGGGTCGTTTT GCTACTTT G CCGCCGAT GTT GTA GGGTGTGTAGACAGACTGTAGATGAATAATGTCAGT AACACCTGTGGGGGGTTCAG TG CTAGTGGGCTGCAAAACTTGAGCACT GC TTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGCACAGGCAG                                                                                                 ]
[+] EMBL CB096277             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACCTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGA TTGATGGTTCTCTGCAACTGNTGGTGGAG CTAAGGNTCAGCAGCTATGNTCGCGAGT GTATTAGCGCTCTTTTGGCGGN G CTGGGTAGTAGAA TGNANAATCGGTTCTTGCTGATT CCT GGACTGATCCAGATCAAACATCTTCTAAAGGNTCTGCGATGCAATGCTAGCTGCANACGGNANA GGGACAGGGGGTCGNTTT GCTACTTT GCCCGCC AT GTT GT                                                                                                                                                                                                                                                  ]
[+] EMBL AK060912             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGA TTGATGGTTCTCTGCAACTGTTGGTGGAG CT AGGTTCAGCAGCTATGTTCGCGAGT GTATTAGCGCTCTTTTGGCGGT G CTGGGTAGTAGAA TGTAGAATCGTTTCTTGTTGATTCCCT GAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACAGGGGGTCGTTTT GCTACTTT G CCGCCGAT GTT GTA GGGTGTGTAGACAGACTGTAGATGAATAATGTCAGT AACACCTGTGGGGGGTTCAG TG CTAGTGGGCTGCAAAACTTGAGCACT GC TTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGCACAGGCAGGTAATAATTTCGTAATAGAGCATAAACAATTTGTGACCTTAGGTGCGAAGAACATAAAGCTGACCAAGGTGAAGTAATATTGATGCATTGTGCGCTG]
[+] EMBL AU030150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGTCACNCCCGGTTGCTTTTGGTATGGAAACNGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAG CACNGATGAAAGCAGCAATCG CCTGGACTGTGA TCTGTGA AACGAAGTTTTGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA765724             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGNACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGA TTGATAGTTCTCTGCAACTGTTGGTGGAG CT AGGTTCAGCAGCTATGTTCGCGAGT GTATTAGCGCTCTTTTGGCGGT G CTGGGTAGTAGAA TGTAGAATCGTTTCTTGTTGATTCCCT GAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACTGGGGGTCGTTTC GCTACTTT G CCGCCGAT GTT GTA GGGTGTGTAGACAGACTGTAGATGAATAATGTCAGT AACACCTGTGGGGGGTTCAG TG CTAGTGGGCTGCAAAACTTGAGCACT                                                                                                                                                         ]
[+] EMBL AU030151             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGA TCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGA TTGATGGTTCTCTGCAACTGTTGGTGGAG CT NGGTTCAGCAGCTATGTTCGCGAGT GTATTAGCGCTCTTTTGGCGGT G CTGGGTAGTAGAA TGTAGAATCGTTTCTTGTTGATTCCCT GAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTNGCTGCAGACGGGAGATGGTACAGGGGGTCGTTTT GCTACTTT G CCGCCGAT GTT GTA GGGTGTGTAGACAGACTGTAGATGAATAATGTCNGT AACACCTGTGGGGGGTTCAG TG CTNGTGGGCTGCAAAACTTGAGCACT GC TTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGCACAGGCNGGTNATNATTTaaaaa                                                                                  ]
[+] EMBL BI805600             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             gcCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGACTTGATGGTTCTCTGCAACTGTTGNTGGAGCCT AGGTTCAGCAGCTATGTTCGCGAGTGGTATTAGCGCTCTTTTGGCGGTCGCCTGGGTAGTAGAACTGTAGAATCGTTTCTTGCTGATTCCCTGGAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACAGGGGTTCGTTTTGGCTACTTTGG CCGCCGATCGTTNGTACGGTTGTGTAGACAGACTGTAGATGAATAATGTCAGTAAACACCTGTGGGGGNTTCAGTTGCCTAGT GGCTGCAAACGTTGAGCACTGGCTTTCGATCAAATTGTGTCTTTGATaaaaaaga                                                                                                                      ]
[+] EMBL AU058019             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AATCGTTTCTTGTTGATTCCCT GAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACAGGGGGTCGTTTT GCTACTTT G CCGCCGAT GTT GTA GGGTGTGTAGACAGACTGTAGATGAATAATGTCAGT AACACCTGTGGGGGGTTCAG TG CTAGTGGGCTGCAAAACTTGAGCACT GC TTCGATCAAAaaaaaaaaa                                                                                                                                  ]
[+] EMBL AU075523             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TACAGGGGGTCGTTTT GCTACTTT G CCGCCGAT GTT GTA GGGTGTGTAGACAGACTGTAGATGAATAATGTCAGT AACACCTGTGGGGGGTTCAG TG CTAGTGGGCTGCAAAACTTGAGCACT GC TTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGCACAGGCAGGTAATAATTTCGTAATAGAGCATAAACAATTTGTGACCTTAGGTGCGAAGAACAAAAAaaaaa                                  ]


>consensus_12830#0 AAACATCGCGTTATCCTTCCCTCCTCTCGCCTCGGTGGTGTGCGTCTTCCCCACCCACCC CCAGTCTCCAATAGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTC CGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCT CAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGC CAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAA GGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGAC ATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTG GACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTAC AGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACC TTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGC ACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTT TCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCC ACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACAT TGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGT CCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAG TGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAAC TGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCT TTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGT GGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGC AAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTG ATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGAT GCAGATTGATGGTTCTCTGCAACTGTTGGTGGAGCTAGGTTCAGCAGCTATGTTCGCGAG TGTATTAGCGCTCTTTTGGCGGTGCTGGGTAGTAGAATGTAGAATCGTTTCTTGTTGATT CCCTGAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAG ACGGGAGATGGTACAGGGGGTCGTTTTGCTACTTTGCCGCCGATGTTGTAGGGTGTGTAG ACAGACTGTAGATGAATAATGTCAGTAACACCTGTGGGGGGTTCAGTGCTAGTGGGCTGC AAAACTTGAGCACTGCTTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGC ACAGGCAGGTAATAATTTCGTAATAGAGCATAAACAATTTGTGACCTTAGGTGCGAAGAA CATAAAGCTGACCAAGGTGAAGTAATATTGATGCATTGTGCGCTG



consensusID : consensus_12830#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 228
fasta sequence
                              [TGTTCCTGACTGTAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTAC]

[+] EMBL OSS14968A            [TGTTCCTGACTGTAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTAC]


>consensus_12830#1 TGTTCCTGACTGTAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAA CCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGG GCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGAT TTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12830#0      AAACATCGCGTTATCCTTCCCTCCTCTCGCCTCGGTGGTGTGCGTCTTCCCCACCCACCC 60
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      CCAGTCTCCAATAGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTC 120
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      CGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCT 180
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      CAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGC 240
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      CAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAA 300
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      GGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGAC 360
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      ATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTG 420
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      GACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTAC 480
consensus_12830#1      ------------------------------------------------------TGTTCC 6
                                                                             * ** *

consensus_12830#0      AGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACC 540
consensus_12830#1      TGACTG----TAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACC 62
                        *  *      *************************************************

consensus_12830#0      TTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGC 600
consensus_12830#1      TTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGC 122
                       ************************************************************

consensus_12830#0      ACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTT 660
consensus_12830#1      ACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTT 182
                       ************************************************************

consensus_12830#0      TCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCC 720
consensus_12830#1      TCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTAC-------------- 228
                       **********************************************              

consensus_12830#0      ACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACAT 780
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      TGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGT 840
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      CCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAG 900
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      TGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAAC 960
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      TGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCT 1020
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      TTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGT 1080
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      GGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGC 1140
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      AAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTG 1200
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      ATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGAT 1260
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      GCAGATTGATGGTTCTCTGCAACTGTTGGTGGAGCTAGGTTCAGCAGCTATGTTCGCGAG 1320
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      TGTATTAGCGCTCTTTTGGCGGTGCTGGGTAGTAGAATGTAGAATCGTTTCTTGTTGATT 1380
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      CCCTGAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAG 1440
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      ACGGGAGATGGTACAGGGGGTCGTTTTGCTACTTTGCCGCCGATGTTGTAGGGTGTGTAG 1500
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      ACAGACTGTAGATGAATAATGTCAGTAACACCTGTGGGGGGTTCAGTGCTAGTGGGCTGC 1560
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      AAAACTTGAGCACTGCTTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGC 1620
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      ACAGGCAGGTAATAATTTCGTAATAGAGCATAAACAATTTGTGACCTTAGGTGCGAAGAA 1680
consensus_12830#1      ------------------------------------------------------------
                                                                                   

consensus_12830#0      CATAAAGCTGACCAAGGTGAAGTAATATTGATGCATTGTGCGCTG 1725
consensus_12830#1      ---------------------------------------------
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)