These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12832#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1749 fasta sequence [ACACACACGCACGCACCGCGAGCGCAAGCCGGCAACCACCGTCCGCGAAAACCCTAGCCGCGTCGGCGGCTTCGGGGGGAGCGTCGATGTCGGACCCCTTCTACCCGCACGGCCACGGCGGCGCCGCGGGCGGCGAGGGCGCGGCCGCGGCGGGGTACTCGTCCTACGAGGTCGACCTCATCGCGGCCCGCTACGGCGGCCGCCCGCTCGCCAACCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAGCGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCACAATGGGTTCCAGAGGGTGGGATTCCAAATTGGAAAG---AGGCTGCAAATGTTGAAGAATCCTATCCAGAACAAGAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGTTTGGATCGAAATGCAAGTTCAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAAATACCAATGATAAGCATCTAATTGCTGATAGTTCTATCTTACCAGTGAGGCCTTCTGAGCCACTTTGTTCTTTTTATGCAAAAACAGGCAAATGCAAATTTCGTGCAATGTGTAAGTTCAATCATCCCAAGGATATTGAAATACCTTCAAGTCAAAATGAACCCGAAAGTGCAGTGACTGTTGAAGGAGAAACGGATATTGGTTCAGCAGCTGATTCAGTTTCAGCGAAGATGCAAACTCCAGTTGCTGCTGCGCAAGAGTTTAACTCTAAAGGGCTGCCTATGAGACCAGGTGAAGTTGATTGTCCTTTTTACATGAAGATGGGCAGTTGCAAGTTCGGTTCTACTTGTCGATTCAACCATCCTGATCGTCTAGTTTTAAATTTTCCACTTCCACTGGGTCAAACCATTCTCCCTACTCCGGAATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCGCCAAGGTGTCGAATTCAGGGAGCTGAGAAGAGAGACAAATATATTGACGCAAGGCCGAATTAAATCCATGCCTTATTCATTCCTCGCATATGAATTAAACATGAAACCGCACTACTTGGGTAGGTATGTCGTCTTTGTAGATCTCTGTGGCATCTGATGTATTCCCTGTTATTTAGTGGTTTTAGCTGATGCATTTTGAGTATATGCACCTTTCGGTTTGGGCGTTCATGTGCAGGTGACATCATATGCTATAGTATTTTTTTATTGACTTTGTTGAGCATATCTAACTAAAATATATACTAC] [+] EMBL AK112116 [ACACACACGCACGCACCGCGAGCGCAAGCCGGCAACCACCGTCCGCGAAAACCCTAGCCGCGTCGGCGGCTTCGGGGGGAGCGTCGATGTCGGACCCCTTCTACCCGCACGGCCACGGCGGCGCCGCGGGCGGCGAGGGCGCGGCCGCGGCGGGGTACTCGTCCTACGAGGTCGACCTCATCGCGGCCCGCTACGGCGGCCGCCCGCTCGCCAACCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAGCGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCACAATGGGTTCCAGAGGGTGGGATTCCAAATTGGAAAG AGGCTGCAAATGTTGAAGAATCCTATCCAGAACAAGAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGTTTGGATCGAAATGCAAGTTCAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAAATACCAATGATAAGCATCTAATTGCTGATAGTTCTATCTTACCAGTGAGGCCTTCTGAGCCACTTTGTTCTTTTTATGCAAAAACAGGCAAATGCAAATTTCGTGCAATGTGTAAGTTCAATCATCCCAAGGATATTGAAATACCTTCAAGTCAAAATGAACCCGAAAGTGCAGTGACTGTTGAAGGAGAAACGGATATTGGTTCAGCAGCTGATTCAGTTTCAGCGAAGATGCAAACTCCAGTTGCTGCTGCGCAAGAGTTTAACTCTAAAGGGCTGCCTATGAGACCAGGTGAAGTTGATTGTCCTTTTTACATGAAGATGGGCAGTTGCAAGTTCGGTTCTACTTGTCGATTCAACCATCCTGATCGTCTAGTTTTAAATTTTCCACTTCCACTGGGTCAAACCATTCTCCCTACTCCGGAATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCGCCAAGGTGTCGAATTCAGGGAGCTGAGAAGAGAGACAAATATATTGACGCAAGGCCGAATTAAATCCATGCCTTATTCATTCCTCGCATATGAATTAAACATGAAACCGCACTACTTGGGTAGGTATGTCGTCTTTGTAGATCTCTGTGGCATCTGATGTATTCCCTGTTATTTAGTGGTTTTAGCTGATGCATTTTGAGTATATGCACCTTTCGGTTTGGGCGTTCATGTGCAGGTGACATCATATGCTATAGTATTTTTTTATTGACTTTGTTGAGCATATCTAACTAAAATATATACTAC] [+] EMBL AK111682 [ CACACACGCACGCACCGCGAGCGCAAGCCGGCAACCACCGTCCGCGAAAACCCTAGCCGCGTCGGCGGCTTCGGGGGGAGCGTCGATGTCGGACCCCTTCTACCCGCACGGCCACGGCGGCGCCGCGGGCGGCGAGGGCGCGGCCGCGGCGGGGTACTCGTCCTACGAGGTCGACCTCATCGCGGCCCGCTACGGCGGCCGCCCGCTCGCCAACCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAGCGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCACAATGGGTTCCAGAGGGTGGGATTCCAAATTGGAAAGAGCAGGCTGCAAATGTTGAAGAATCCTATCCAGAACAAGAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGTTTGGATCGAAATGCAAGTTCAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAAATACCAATGATAAGCATCTAATTGCTGATAGTTCTATCTTACCAGTGAGGCCTTCTGAGCCACTTTGTTCTTTTTATGCAAAAACAGGCAAATGCAAATTTCGTGCAATGTGTAAGTTCAATCATCCCAAGGATATTGAAATACCTTCAAGTCAAAATGAACCCGAAAGTGCAGTGACTGTTGAAGGAGAAACGGATATTGGTTCAGCAGCTGATTCAGTTTCAGCGAAGATGCAAACTCCAGTTGCTGCTGCGCAAGAGTTTAACTCTAAAGGGCTGCCTATGAGACCAGGTGAAGTTGATTGTCCTTTTTACATGAAGATGGGCAGTTGCAAGTTCGGTTCTACTTGTCGATTCAACCATCCTGATCGTCTAGTTTTAAATTTTCCACTTCCACTGGGTCAAACCATTCTCCCTACTCCGGAATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCGCCAAGGTGTCGAATTCAGGGAGCTGAGAAGAGAGACAAATATATTGACGCAAGGCCGAATTAAATCCATGCCTTATTCATTCCTCGCATATGAATTAAACATGAAACCGCACTACTTGGGTAGGTATGTCGTCTTTGTAGATCTCTGTGGCATCTGATGTATTCCCTGTTATTTAGTGGTTTTAGCTGATGCATTTTGAGTATATGCACCTTTCGGTTTGGGCGTTCATGTGCAGGTGACATCATATGCTATAGTAT ] [+] EMBL CB658601 [ GCAACCACCGTCCGCGAAAACCCTAGCCGCGTCGGCGGCTTCGGGGGGAGCGTCGATGTCGGACCCCTTCTACCCGCACGGCCACGGCGGCGCCGCGGGCGGCGAGGGCGCGGCCGCGGCGGGGTACTCGTCCTACGAGGTCGACCTCATCGCGGCCCGCTACGGCGGCCGCCCGCTCGCCAACCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAGCGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCACAATGGGTTCCAGAGGGTGGGATTCCAAATTGGAAAG AGGCTGCAAATGTTGAAGAATCCTATCCAGAACAAGAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGTTTGGATCGAAATGCAAGTTCAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAAATACCAATGATAAGCATCTAATTGCTGATAGTTCTATCTTACCAGTGAGGCCTTCTGAGCCACTTTGTTCTTTTTATGCAAAAACAGGCAAATGCAAATTTCGTGCAATGTGTAAGTTCAATCATCCCAAGGATATTGAAATACCTTC ] [+] EMBL BI305968 [ tagctGCGGCCGCCCGCTCGCCAGCCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGT ] [-] EMBL BI808716 [ CCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGC TTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCACAATGGGTTCCAGAGGGTGGGATTCCAAA TGGAAAGAGCAGGCTGCAAATGTTGAAGAATCCTATCCAGAACAACAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGTTTGGATCGAAATGCAAGTTTAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAAAAACCAATGATAAGCATCTAATTG TGATAGTTCTATCTTACCAGTGAGG CTTCTGAGCCACTTg ] [-] EMBL CB658602 [ TGATCGTCTAGTTTTAAATTTTCCACTTCCACTGGGTCAAACCATTCTCCCTACTCCGGAATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCGCCAAGGTGTCGAATTCAGGGAGCTGAGAAGAGAGACAAATATATTGACGCAAGGCCGAATTAAATCCATGCCTTATTCATTCCTCGCATATGAATTAAACATGAAACCGCACTACTTGGGTAGGTATGTCGTCTTTGTAGATCTCTGTGGCATCTGATGTATTCCCTGTTATTTAGTGGTTTTAGCTGATGCATTTTGAGTATATGCACCTTTCGGTTTGGGCGTTCATGTGCAGGTGACATCATATGCTATAGTATTTTTTTATTGACTTTGTTGAGCATAAAAAAAAAAAAaaaagg ] consensusID : consensus_12832#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 645 fasta sequence [GGAATACTGCGGTCGCCGCTCGCCACCCTTCCTCGGCCGCCG-CGA-CTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGG-AAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCG] [+] EMBL CB966303 [GGAATACTGCGGTCGCCGCTCGCCAACCTTCCTCGGCTG CG CGA CTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGG AAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGC ] [+] EMBL BI305625 [ aACCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGG AAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCG] [+] EMBL CB965331 [ ACCCTTCCTCGGCCGCCG CGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGCAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGCACGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCATGCTGCTAACTTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTAGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGACTAACAAGAAG ] [+] EMBL CB966083 [ CTTCCTCGG CGCCG CGA CTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGG ] consensusID : consensus_12832#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 629 fasta sequence [AACCCTTCCTCGGGCGCCGCGGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTCGAACAGATGGAGGCTTGGTATTCTTCACATACTATGACCAAACGCCCTAGGCTTGAAAGCTGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAGACCTGGTAATTCGGTAGGTTCCTGGCGAGTTTGACCATCCAGTGCTGCTTAGATGTCATCGTGCGGAGCTGTCAGGCAAGGCTTAGATTGTCATGCGGCACACATGGCCTGTGGGACCTGGGTCCAGTCACCTATGCCCAGAGGGCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTCGCAATGTTGGCTGACCGATGCAAGTTTGGCCACCCAGTGTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCGGGTTACTCTGGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTGGGTATGCTGTGCCAGTTCGATCGACCAGCCCCTCAGG] [+] EMBL CB967055 [AACCCTTCCTCGGGCGCCGCGGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTCGAACAGATGGAGGCTTGGTATTCTTCACATACTATGACCAAACGCCCTAGGCTTGAAAGCTGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAGACCTGGTAATTCGGTAGGTTCCTGGCGAGTTTGACCATCCAGTGCTGCTTAGATGTCATCGTGCGGAGCTGTCAGGCAAGGCTTAGATTGTCATGCGGCACACATGGCCTGTGGGACCTGGGTCCAGTCACCTATGCCCAGAGGGCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTCGCAATGTTGGCTGACCGATGCAAGTTTGGCCACCCAGTGTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCGGGTTACTCTGGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTGGGTATGCTGTGCCAGTTCGATCGACCAGCCCCTCAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 ACACACACGCACGCACCGCGAGCGCAAGCCGGCAACCACCGTCCGCGAAAACCCTAGCCG 60 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 CGTCGGCGGCTTCGGGGGGAGCGTCGATGTCGGACCCCTTCTACCCGCACGGCCACGGCG 120 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 GCGCCGCGGGCGGCGAGGGCGCGGCCGCGGCGGGGTACTCGTCCTACGAGGTCGACCTCA 180 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 TCGCGGCCCGCTACGGCGGCCGCCCGCTCGCCAACCCTTCCTCGGCCGCCGCCGACCTCG 240 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 ACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGG 300 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 GAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAGC 360 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 GCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTG 420 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 CCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCAC 480 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 AATGGGTTCCAGAGGGTGGGATTCCAAATTGGAAAGAGGCTGCAAATGTTGAAGAATCCT 540 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 ATCCAGAACAAGAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGT 600 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 TTGGATCGAAATGCAAGTTCAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAA 660 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 ATACCAATGATAAGCATCTAATTGCTGATAGTTCTATCTTACCAGTGAGGCCTTCTGAGC 720 consensus_12832#1 ------------------------------------------------------GGAATA 6 consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 CACTTTGTTCTTTTTATGCAAAAACAGGCAAATGCAAATTTCGTGCAATGTGTAAGTTCA 780 consensus_12832#1 CTGCGGTCGCCGCTCGCCACCCTTCCTCG-GCCGCCGCGA--CTCGACGCGCGGCTGGCC 63 consensus_12832#2 -----------------AACCCTTCCTCG-GGCGCCGCGGACCTCGACGCGCGGCTGGCC 42 consensus_12832#0 ATCATCCCAAGGATATTGAAATACCTTCAAGTCAAAATGAACCCGAAAGTGCAG-TGACT 839 * * ** * * * * * * ** * ** * consensus_12832#1 GGCGCGAGGCGATCC-ATGGGAGTTCTCTATCATCAGCCAATT---ATGGGAAGCCATAG 119 consensus_12832#2 GGCGCGAGGCGATCC-ATGGGAGTTCTCTATCATCAGCCAATT---ATGGGAAGCCATAG 98 consensus_12832#0 GTTGAAGGAGAAACGGATATTGGTTCAGCAGC-TGATTCAGTTTCAGCGAAGATGCAAAC 898 * * * * * ** **** * * * * ** ** * * ** * consensus_12832#1 TACTGTT-GAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGC 178 consensus_12832#2 TACTGTTCGAACAGATGGAGGCTTGGTATTCTTCACATACTATGACCAAACGCCCTAGGC 158 consensus_12832#0 TCCAGTTGCTGCTGCGCAAGAGTTTA-ACTCTAAAGGGCTGCCTATGAGACCAGGTGAAG 957 * * *** * * ** ** * *** * * * ** * consensus_12832#1 TTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATA 238 consensus_12832#2 TTGAAAGCTGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATA 218 consensus_12832#0 TTGATTGT--CCTTTTTACATGAAGATGGGCAGTTGCAAGTTCGGTTCTACTTGTCGATT 1015 **** * **** ** ** * * * * ** ** ** consensus_12832#1 TGATGACCCGA-ACCTGTAAATTCGG-AGGTTCC-----TG-CAAATTTGACCATCCA-- 288 consensus_12832#2 TGATGACCCGAGACCTGGTAATTCGGTAGGTTCC-----TGGCGAGTTTGACCATCCAG- 272 consensus_12832#0 CAACCATCCTG-ATCGTCTAGTTTTAAATTTTCCACTTCCACTGGGTCAAACCATTCTCC 1074 * * ** * * * ** * **** * ***** * consensus_12832#1 ---------------TGCTGCT-AAAT-TCATC-TGCAAACT--TCATGCAAGGCTTTGA 328 consensus_12832#2 ---------------TGCTGCTTAGATGTCATCGTGCGGAGCTGTCAGGCAAGGCTTAGA 317 consensus_12832#0 CTACTCCGGAATCCATGCTGCT-AAAT-TCATC-TGCAAACT--TCATGCAAGGCTTTGA 1129 ******* * ** ***** *** * *** ********* ** consensus_12832#1 TTTTCATGCGGCACACATG-CCTGTTGGACCTGGG-CCAGTCACCTATCCCCAGAGGCCT 386 consensus_12832#2 TTGTCATGCGGCACACATGGCCTGTGGGACCTGGGTCCAGTCACCTATGCCCAGAGGGCT 377 consensus_12832#0 TTTTCATGCGGCACACATG-CCTGTTGGACCTGGG-CCAGTCACCTATCCCCAGAGGCCT 1187 ** **************** ***** ********* ************ ******** ** consensus_12832#1 GGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAA-GTTTGCTGACCGATG 445 consensus_12832#2 GGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTCGCAATGTTGGCTGACCGATG 437 consensus_12832#0 GGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAA-GTTTGCTGACCGATG 1246 *************************************** **** *** *********** consensus_12832#1 CAAGTTTCACCACCCAAT-TGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTG 504 consensus_12832#2 CAAGTTTGGCCACCCAGTGTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTG 497 consensus_12832#0 CAAGTTTCACCACCCAAT-TGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTG 1305 ******* ******* * ***************************************** consensus_12832#1 CTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTAT 564 consensus_12832#2 CTGAGGAGTCTGTGCGGGTTACTCTGGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTAT 557 consensus_12832#0 CTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTAT 1365 *************** * ******* ********************************** consensus_12832#1 GTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACC 624 consensus_12832#2 GTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTGGGTATGCTGTGCCAGTTCGATCGAC 617 consensus_12832#0 GTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACC 1425 ********************************** ******* **** ******* * * consensus_12832#1 CACCCCCTCAGGAGGCTATCG--------------------------------------- 645 consensus_12832#2 CAGCCCCTCAGG------------------------------------------------ 629 consensus_12832#0 CACCCCCTCAGGAGGCTATCGCCAAGGTGTCGAATTCAGGGAGCTGAGAAGAGAGACAAA 1485 ** ********* consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 TATATTGACGCAAGGCCGAATTAAATCCATGCCTTATTCATTCCTCGCATATGAATTAAA 1545 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 CATGAAACCGCACTACTTGGGTAGGTATGTCGTCTTTGTAGATCTCTGTGGCATCTGATG 1605 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 TATTCCCTGTTATTTAGTGGTTTTAGCTGATGCATTTTGAGTATATGCACCTTTCGGTTT 1665 consensus_12832#1 ------------------------------------------------------------ consensus_12832#2 ------------------------------------------------------------ consensus_12832#0 GGGCGTTCATGTGCAGGTGACATCATATGCTATAGTATTTTTTTATTGACTTTGTTGAGC 1725 consensus_12832#1 ------------------------ consensus_12832#2 ------------------------ consensus_12832#0 ATATCTAACTAAAATATATACTAC 1749 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||