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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12832#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1749 fasta sequence
[ACACACACGCACGCACCGCGAGCGCAAGCCGGCAACCACCGTCCGCGAAAACCCTAGCCGCGTCGGCGGCTTCGGGGGGAGCGTCGATGTCGGACCCCTTCTACCCGCACGGCCACGGCGGCGCCGCGGGCGGCGAGGGCGCGGCCGCGGCGGGGTACTCGTCCTACGAGGTCGACCTCATCGCGGCCCGCTACGGCGGCCGCCCGCTCGCCAACCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAGCGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCACAATGGGTTCCAGAGGGTGGGATTCCAAATTGGAAAG---AGGCTGCAAATGTTGAAGAATCCTATCCAGAACAAGAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGTTTGGATCGAAATGCAAGTTCAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAAATACCAATGATAAGCATCTAATTGCTGATAGTTCTATCTTACCAGTGAGGCCTTCTGAGCCACTTTGTTCTTTTTATGCAAAAACAGGCAAATGCAAATTTCGTGCAATGTGTAAGTTCAATCATCCCAAGGATATTGAAATACCTTCAAGTCAAAATGAACCCGAAAGTGCAGTGACTGTTGAAGGAGAAACGGATATTGGTTCAGCAGCTGATTCAGTTTCAGCGAAGATGCAAACTCCAGTTGCTGCTGCGCAAGAGTTTAACTCTAAAGGGCTGCCTATGAGACCAGGTGAAGTTGATTGTCCTTTTTACATGAAGATGGGCAGTTGCAAGTTCGGTTCTACTTGTCGATTCAACCATCCTGATCGTCTAGTTTTAAATTTTCCACTTCCACTGGGTCAAACCATTCTCCCTACTCCGGAATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCGCCAAGGTGTCGAATTCAGGGAGCTGAGAAGAGAGACAAATATATTGACGCAAGGCCGAATTAAATCCATGCCTTATTCATTCCTCGCATATGAATTAAACATGAAACCGCACTACTTGGGTAGGTATGTCGTCTTTGTAGATCTCTGTGGCATCTGATGTATTCCCTGTTATTTAGTGGTTTTAGCTGATGCATTTTGAGTATATGCACCTTTCGGTTTGGGCGTTCATGTGCAGGTGACATCATATGCTATAGTATTTTTTTATTGACTTTGTTGAGCATATCTAACTAAAATATATACTAC]
[+] EMBL AK112116 [ACACACACGCACGCACCGCGAGCGCAAGCCGGCAACCACCGTCCGCGAAAACCCTAGCCGCGTCGGCGGCTTCGGGGGGAGCGTCGATGTCGGACCCCTTCTACCCGCACGGCCACGGCGGCGCCGCGGGCGGCGAGGGCGCGGCCGCGGCGGGGTACTCGTCCTACGAGGTCGACCTCATCGCGGCCCGCTACGGCGGCCGCCCGCTCGCCAACCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAGCGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCACAATGGGTTCCAGAGGGTGGGATTCCAAATTGGAAAG AGGCTGCAAATGTTGAAGAATCCTATCCAGAACAAGAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGTTTGGATCGAAATGCAAGTTCAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAAATACCAATGATAAGCATCTAATTGCTGATAGTTCTATCTTACCAGTGAGGCCTTCTGAGCCACTTTGTTCTTTTTATGCAAAAACAGGCAAATGCAAATTTCGTGCAATGTGTAAGTTCAATCATCCCAAGGATATTGAAATACCTTCAAGTCAAAATGAACCCGAAAGTGCAGTGACTGTTGAAGGAGAAACGGATATTGGTTCAGCAGCTGATTCAGTTTCAGCGAAGATGCAAACTCCAGTTGCTGCTGCGCAAGAGTTTAACTCTAAAGGGCTGCCTATGAGACCAGGTGAAGTTGATTGTCCTTTTTACATGAAGATGGGCAGTTGCAAGTTCGGTTCTACTTGTCGATTCAACCATCCTGATCGTCTAGTTTTAAATTTTCCACTTCCACTGGGTCAAACCATTCTCCCTACTCCGGAATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCGCCAAGGTGTCGAATTCAGGGAGCTGAGAAGAGAGACAAATATATTGACGCAAGGCCGAATTAAATCCATGCCTTATTCATTCCTCGCATATGAATTAAACATGAAACCGCACTACTTGGGTAGGTATGTCGTCTTTGTAGATCTCTGTGGCATCTGATGTATTCCCTGTTATTTAGTGGTTTTAGCTGATGCATTTTGAGTATATGCACCTTTCGGTTTGGGCGTTCATGTGCAGGTGACATCATATGCTATAGTATTTTTTTATTGACTTTGTTGAGCATATCTAACTAAAATATATACTAC]
[+] EMBL AK111682 [ CACACACGCACGCACCGCGAGCGCAAGCCGGCAACCACCGTCCGCGAAAACCCTAGCCGCGTCGGCGGCTTCGGGGGGAGCGTCGATGTCGGACCCCTTCTACCCGCACGGCCACGGCGGCGCCGCGGGCGGCGAGGGCGCGGCCGCGGCGGGGTACTCGTCCTACGAGGTCGACCTCATCGCGGCCCGCTACGGCGGCCGCCCGCTCGCCAACCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAGCGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCACAATGGGTTCCAGAGGGTGGGATTCCAAATTGGAAAGAGCAGGCTGCAAATGTTGAAGAATCCTATCCAGAACAAGAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGTTTGGATCGAAATGCAAGTTCAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAAATACCAATGATAAGCATCTAATTGCTGATAGTTCTATCTTACCAGTGAGGCCTTCTGAGCCACTTTGTTCTTTTTATGCAAAAACAGGCAAATGCAAATTTCGTGCAATGTGTAAGTTCAATCATCCCAAGGATATTGAAATACCTTCAAGTCAAAATGAACCCGAAAGTGCAGTGACTGTTGAAGGAGAAACGGATATTGGTTCAGCAGCTGATTCAGTTTCAGCGAAGATGCAAACTCCAGTTGCTGCTGCGCAAGAGTTTAACTCTAAAGGGCTGCCTATGAGACCAGGTGAAGTTGATTGTCCTTTTTACATGAAGATGGGCAGTTGCAAGTTCGGTTCTACTTGTCGATTCAACCATCCTGATCGTCTAGTTTTAAATTTTCCACTTCCACTGGGTCAAACCATTCTCCCTACTCCGGAATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCGCCAAGGTGTCGAATTCAGGGAGCTGAGAAGAGAGACAAATATATTGACGCAAGGCCGAATTAAATCCATGCCTTATTCATTCCTCGCATATGAATTAAACATGAAACCGCACTACTTGGGTAGGTATGTCGTCTTTGTAGATCTCTGTGGCATCTGATGTATTCCCTGTTATTTAGTGGTTTTAGCTGATGCATTTTGAGTATATGCACCTTTCGGTTTGGGCGTTCATGTGCAGGTGACATCATATGCTATAGTAT ]
[+] EMBL CB658601 [ GCAACCACCGTCCGCGAAAACCCTAGCCGCGTCGGCGGCTTCGGGGGGAGCGTCGATGTCGGACCCCTTCTACCCGCACGGCCACGGCGGCGCCGCGGGCGGCGAGGGCGCGGCCGCGGCGGGGTACTCGTCCTACGAGGTCGACCTCATCGCGGCCCGCTACGGCGGCCGCCCGCTCGCCAACCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAGCGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCACAATGGGTTCCAGAGGGTGGGATTCCAAATTGGAAAG AGGCTGCAAATGTTGAAGAATCCTATCCAGAACAAGAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGTTTGGATCGAAATGCAAGTTCAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAAATACCAATGATAAGCATCTAATTGCTGATAGTTCTATCTTACCAGTGAGGCCTTCTGAGCCACTTTGTTCTTTTTATGCAAAAACAGGCAAATGCAAATTTCGTGCAATGTGTAAGTTCAATCATCCCAAGGATATTGAAATACCTTC ]
[+] EMBL BI305968 [ tagctGCGGCCGCCCGCTCGCCAGCCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGT ]
[-] EMBL BI808716 [ CCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTGAACAGATTGAGGC TTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCACAATGGGTTCCAGAGGGTGGGATTCCAAA TGGAAAGAGCAGGCTGCAAATGTTGAAGAATCCTATCCAGAACAACAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGTTTGGATCGAAATGCAAGTTTAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAAAAACCAATGATAAGCATCTAATTG TGATAGTTCTATCTTACCAGTGAGG CTTCTGAGCCACTTg ]
[-] EMBL CB658602 [ TGATCGTCTAGTTTTAAATTTTCCACTTCCACTGGGTCAAACCATTCTCCCTACTCCGGAATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCGCCAAGGTGTCGAATTCAGGGAGCTGAGAAGAGAGACAAATATATTGACGCAAGGCCGAATTAAATCCATGCCTTATTCATTCCTCGCATATGAATTAAACATGAAACCGCACTACTTGGGTAGGTATGTCGTCTTTGTAGATCTCTGTGGCATCTGATGTATTCCCTGTTATTTAGTGGTTTTAGCTGATGCATTTTGAGTATATGCACCTTTCGGTTTGGGCGTTCATGTGCAGGTGACATCATATGCTATAGTATTTTTTTATTGACTTTGTTGAGCATAAAAAAAAAAAAaaaagg ]
consensusID : consensus_12832#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 645 fasta sequence
[GGAATACTGCGGTCGCCGCTCGCCACCCTTCCTCGGCCGCCG-CGA-CTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGG-AAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCG]
[+] EMBL CB966303 [GGAATACTGCGGTCGCCGCTCGCCAACCTTCCTCGGCTG CG CGA CTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGG AAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGC ]
[+] EMBL BI305625 [ aACCCTTCCTCGGCCGCCGCCGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGG AAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCATGCTGCTAAATTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACCCACCCCCTCAGGAGGCTATCG]
[+] EMBL CB965331 [ ACCCTTCCTCGGCCGCCG CGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGCAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGCACGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCATGCTGCTAACTTCATCTGCAAACTTCATGCAAGGCTTTGATTTTCATGCGGCACACATGCCTGTTGGACCTGGGCCAGTCACCTATCCCCAGAGGCCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTAGCAAGTTTGCTGACCGATGCAAGTTTCACCACCCAATTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCAGCTTACTCTTGCTGGACTAACAAGAAG ]
[+] EMBL CB966083 [ CTTCCTCGG CGCCG CGA CTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGG ]
consensusID : consensus_12832#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 629 fasta sequence
[AACCCTTCCTCGGGCGCCGCGGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTCGAACAGATGGAGGCTTGGTATTCTTCACATACTATGACCAAACGCCCTAGGCTTGAAAGCTGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAGACCTGGTAATTCGGTAGGTTCCTGGCGAGTTTGACCATCCAGTGCTGCTTAGATGTCATCGTGCGGAGCTGTCAGGCAAGGCTTAGATTGTCATGCGGCACACATGGCCTGTGGGACCTGGGTCCAGTCACCTATGCCCAGAGGGCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTCGCAATGTTGGCTGACCGATGCAAGTTTGGCCACCCAGTGTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCGGGTTACTCTGGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTGGGTATGCTGTGCCAGTTCGATCGACCAGCCCCTCAGG]
[+] EMBL CB967055 [AACCCTTCCTCGGGCGCCGCGGACCTCGACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGGGAAGCCATAGTACTGTTCGAACAGATGGAGGCTTGGTATTCTTCACATACTATGACCAAACGCCCTAGGCTTGAAAGCTGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATATGATGACCCGAGACCTGGTAATTCGGTAGGTTCCTGGCGAGTTTGACCATCCAGTGCTGCTTAGATGTCATCGTGCGGAGCTGTCAGGCAAGGCTTAGATTGTCATGCGGCACACATGGCCTGTGGGACCTGGGTCCAGTCACCTATGCCCAGAGGGCTGGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTCGCAATGTTGGCTGACCGATGCAAGTTTGGCCACCCAGTGTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTGCTGAGGAGTCTGTGCGGGTTACTCTGGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTATGTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTGGGTATGCTGTGCCAGTTCGATCGACCAGCCCCTCAGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 ACACACACGCACGCACCGCGAGCGCAAGCCGGCAACCACCGTCCGCGAAAACCCTAGCCG 60
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 CGTCGGCGGCTTCGGGGGGAGCGTCGATGTCGGACCCCTTCTACCCGCACGGCCACGGCG 120
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 GCGCCGCGGGCGGCGAGGGCGCGGCCGCGGCGGGGTACTCGTCCTACGAGGTCGACCTCA 180
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 TCGCGGCCCGCTACGGCGGCCGCCCGCTCGCCAACCCTTCCTCGGCCGCCGCCGACCTCG 240
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 ACGCGCGGCTGGCCGGCGCGAGGCGATCCATGGGAGTTCTCTATCATCAGCCAATTATGG 300
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 GAAGCCATAGTACTGTTGAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAGC 360
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 GCCCTAGGCTTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTG 420
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 CCTTCTATATGATGACCCGAACCTGTAAATTCGGAGGTTCCTGCAAATTTGACCATCCAC 480
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 AATGGGTTCCAGAGGGTGGGATTCCAAATTGGAAAGAGGCTGCAAATGTTGAAGAATCCT 540
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 ATCCAGAACAAGAAGGGGAACCAGATTGTCCTTTTTTTATGAAGACTGGTAAATGCAAGT 600
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 TTGGATCGAAATGCAAGTTCAATCATCCAAAGGAAAAGGTTAATGCATTAGCGTCTGGAA 660
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 ATACCAATGATAAGCATCTAATTGCTGATAGTTCTATCTTACCAGTGAGGCCTTCTGAGC 720
consensus_12832#1 ------------------------------------------------------GGAATA 6
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 CACTTTGTTCTTTTTATGCAAAAACAGGCAAATGCAAATTTCGTGCAATGTGTAAGTTCA 780
consensus_12832#1 CTGCGGTCGCCGCTCGCCACCCTTCCTCG-GCCGCCGCGA--CTCGACGCGCGGCTGGCC 63
consensus_12832#2 -----------------AACCCTTCCTCG-GGCGCCGCGGACCTCGACGCGCGGCTGGCC 42
consensus_12832#0 ATCATCCCAAGGATATTGAAATACCTTCAAGTCAAAATGAACCCGAAAGTGCAG-TGACT 839
* * ** * * * * * * ** * ** *
consensus_12832#1 GGCGCGAGGCGATCC-ATGGGAGTTCTCTATCATCAGCCAATT---ATGGGAAGCCATAG 119
consensus_12832#2 GGCGCGAGGCGATCC-ATGGGAGTTCTCTATCATCAGCCAATT---ATGGGAAGCCATAG 98
consensus_12832#0 GTTGAAGGAGAAACGGATATTGGTTCAGCAGC-TGATTCAGTTTCAGCGAAGATGCAAAC 898
* * * * * ** **** * * * * ** ** * * ** *
consensus_12832#1 TACTGTT-GAACAGATTGAGGCTTTGTATTCTTCAAATACTATGACCAAACGCCCTAGGC 178
consensus_12832#2 TACTGTTCGAACAGATGGAGGCTTGGTATTCTTCACATACTATGACCAAACGCCCTAGGC 158
consensus_12832#0 TCCAGTTGCTGCTGCGCAAGAGTTTA-ACTCTAAAGGGCTGCCTATGAGACCAGGTGAAG 957
* * *** * * ** ** * *** * * * ** *
consensus_12832#1 TTGAAAGCAGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATA 238
consensus_12832#2 TTGAAAGCTGCCTTCCTATATATCCACAGCGACCGGGGGAAAAGGACTGTGCCTTCTATA 218
consensus_12832#0 TTGATTGT--CCTTTTTACATGAAGATGGGCAGTTGCAAGTTCGGTTCTACTTGTCGATT 1015
**** * **** ** ** * * * * ** ** **
consensus_12832#1 TGATGACCCGA-ACCTGTAAATTCGG-AGGTTCC-----TG-CAAATTTGACCATCCA-- 288
consensus_12832#2 TGATGACCCGAGACCTGGTAATTCGGTAGGTTCC-----TGGCGAGTTTGACCATCCAG- 272
consensus_12832#0 CAACCATCCTG-ATCGTCTAGTTTTAAATTTTCCACTTCCACTGGGTCAAACCATTCTCC 1074
* * ** * * * ** * **** * ***** *
consensus_12832#1 ---------------TGCTGCT-AAAT-TCATC-TGCAAACT--TCATGCAAGGCTTTGA 328
consensus_12832#2 ---------------TGCTGCTTAGATGTCATCGTGCGGAGCTGTCAGGCAAGGCTTAGA 317
consensus_12832#0 CTACTCCGGAATCCATGCTGCT-AAAT-TCATC-TGCAAACT--TCATGCAAGGCTTTGA 1129
******* * ** ***** *** * *** ********* **
consensus_12832#1 TTTTCATGCGGCACACATG-CCTGTTGGACCTGGG-CCAGTCACCTATCCCCAGAGGCCT 386
consensus_12832#2 TTGTCATGCGGCACACATGGCCTGTGGGACCTGGGTCCAGTCACCTATGCCCAGAGGGCT 377
consensus_12832#0 TTTTCATGCGGCACACATG-CCTGTTGGACCTGGG-CCAGTCACCTATCCCCAGAGGCCT 1187
** **************** ***** ********* ************ ******** **
consensus_12832#1 GGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAA-GTTTGCTGACCGATG 445
consensus_12832#2 GGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTCGCAATGTTGGCTGACCGATG 437
consensus_12832#0 GGAGCAACTGTTTGTGATTTCTACATGAAGACAGGATTTTGCAA-GTTTGCTGACCGATG 1246
*************************************** **** *** ***********
consensus_12832#1 CAAGTTTCACCACCCAAT-TGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTG 504
consensus_12832#2 CAAGTTTGGCCACCCAGTGTGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTG 497
consensus_12832#0 CAAGTTTCACCACCCAAT-TGATCGTTCTGCTCCCGATCCCTCTGCAAACTGGGAGCCTG 1305
******* ******* * *****************************************
consensus_12832#1 CTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTAT 564
consensus_12832#2 CTGAGGAGTCTGTGCGGGTTACTCTGGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTAT 557
consensus_12832#0 CTGAGGAGTCTGTGCAGCTTACTCTTGCTGGCCTACCAAGAAGAGAGGATGCCGTGGTAT 1365
*************** * ******* **********************************
consensus_12832#1 GTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACC 624
consensus_12832#2 GTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTGGGTATGCTGTGCCAGTTCGATCGAC 617
consensus_12832#0 GTGCCTTCTACATGAAGACTGGCGTGTGCAAGTTTGGTATGCAGTGCAAGTTCGACCACC 1425
********************************** ******* **** ******* * *
consensus_12832#1 CACCCCCTCAGGAGGCTATCG--------------------------------------- 645
consensus_12832#2 CAGCCCCTCAGG------------------------------------------------ 629
consensus_12832#0 CACCCCCTCAGGAGGCTATCGCCAAGGTGTCGAATTCAGGGAGCTGAGAAGAGAGACAAA 1485
** *********
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 TATATTGACGCAAGGCCGAATTAAATCCATGCCTTATTCATTCCTCGCATATGAATTAAA 1545
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 CATGAAACCGCACTACTTGGGTAGGTATGTCGTCTTTGTAGATCTCTGTGGCATCTGATG 1605
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 TATTCCCTGTTATTTAGTGGTTTTAGCTGATGCATTTTGAGTATATGCACCTTTCGGTTT 1665
consensus_12832#1 ------------------------------------------------------------
consensus_12832#2 ------------------------------------------------------------
consensus_12832#0 GGGCGTTCATGTGCAGGTGACATCATATGCTATAGTATTTTTTTATTGACTTTGTTGAGC 1725
consensus_12832#1 ------------------------
consensus_12832#2 ------------------------
consensus_12832#0 ATATCTAACTAAAATATATACTAC 1749
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||