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Oryza sativa
cluster # 12840 cluster # 12840       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12840#0 length = 1274 sequences # 9  
consensus_12840#1 length = 329 sequences # 1  
consensus_12840#2 length = 286 sequences # 1  

consensusID : consensus_12840#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1274
fasta sequence
                              [CGACGCGAGGCCACTCGAAGCGGCATTTTGCACCTAACCCCCTAGAGTTATCGGGAATCGCAAAGAGGGGGCCATCTCGAGTGGCTCGCCGGCGGCGGCGGAGGCGGGGAGAGATGCTGCCCTACGCGACGGCGGCGGAGGCGGAGGCGGCGCTGGGGAGGGCGATGACGGCGGCGGAGTCGCTGTGGTTCAGGTACTCGGCGGGGATCCCGGACTACGTCCTCTTCTGGCACAACATCCTCTTCCTCTTCGTCGTCTTCACGCTCGCGCCGCTCCCCGTCGCGCTCCTCGAGCTCCGCGCGCCGGCCGCCGTGGGGCCGTTCAAGCTGCAGCCCAAGGTGCGGCTCTCCCGGGAGGAGTTCTTCCGCTGCTACAGGGACGTCATGCGCCTCTTCTTCCTCGTCATCGGCCCGCTCCAGCTCGTGTCCTACCCTACCGTCAAGATGGTGGGAATCCACACAGGGCTGCCACTGCCGTCGCTGGGGGAGATGGCGGCGCAGCTGCTGGTGTACTTCCTGGTTGAGGACTACCTCAACTACTGGATCCATCGGTTGCTACATGGGGAGTGGGGCTATGAGAAGATCCACCGTGTCCACCATGAGTTCACGGCACCCATTGGATTCGCCGCGCCATATGCACACTGGGCTGAGGTGCTCATCCTCGGCATCCCCTCCTTTGTCGGGCCAGCGCTTGCACCTGGTCACATGATCACCTTCTGGCTCTGGA-TTGTACT-CCGCCAGAT-GGAGGCCATAGAGACACACAGCGGCTTTGATTTCCCGTTCAACCTGACAAAGTATATTCCATTCTATGGAGGCGCAGAATACCATGATTATCATCACTATGTTGGACGCCAGAGTCAGAGCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTATATGGAACCGACAAAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGGGTAGTCTTTATGTGGTTTGCGCTCAACTTGAAAGAGTCAGAACCAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK121804             [CGACGCGAGGCCACTCGAAGCGGCATTTTGCACCTAACCCCCTAGAGTTATCGGGAATCGCAAAGAGGGGGCCATCTCGAGTGGCTCGCCGGCGGCGGCGGAGGCGGGGAGAGATGCTGCCCTACGCGACGGCGGCGGAGGCGGAGGCGGCGCTGGGGAGGGCGATGACGGCGGCGGAGTCGCTGTGGTTCAGGTACTCGGCGGGGATCCCGGACTACGTCCTCTTCTGGCACAACATCCTCTTCCTCTTCGTCGTCTTCACGCTCGCGCCGCTCCCCGTCGCGCTCCTCGAGCTCCGCGCGCCGGCCGCCGTGGGGCCGTTCAAGCTGCAGCCCAAGGTGCGGCTCTCCCGGGAGGAGTTCTTCCGCTGCTACAGGGACGTCATGCGCCTCTTCTTCCTCGTCATCGGCCCGCTCCAGCTCGTGTCCTACCCTACCGTCAAGATGGTGGGAATCCACACAGGGCTGCCACTGCCGTCGCTGGGGGAGATGGCGGCGCAGCTGCTGGTGTACTTCCTGGTTGAGGACTACCTCAACTACTGGATCCATCGGTTGCTACATGGGGAGTGGGGCTATGAGAAGATCCACCGTGTCCACCATGAGTTCACGGCACCCATTGGATTCGCCGCGCCATATGCACACTGGGCTGAGGTGCTCATCCTCGGCATCCCCTCCTTTGTCGGGCCAGCGCTTGCACCTGGTCACATGATCACCTTCTGGCTCTGGA TTGTACT CCGCCAGAT GGAGGCCATAGAGACACACAGCGGCTTTGATTTCCCGTTCAACCTGACAAAGTATATTCCATTCTATGGAGGCGCAGAATACCATGATTATCATCACTATGTTGGACGCCAGAGTCAGAGCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTATATGGAACCGACAAAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGGGTAGTCTTTATGTG                                                      ]
[+] EMBL OS0007A              [                         TTTTGCACCTAACCCCCTAGAGTTATCGGGAATCGCAAAGAGGGGGCCATCTCGAGTGGCTCGCCGGCGG NGCGGAGGCGGGGAGAGATGCTGCCCTACGCGACGGCGGCGGAGGCGGAGGCGGCGCTGGGGAGGGCGATGACGGCGGCGGAGTCGCTGTGGTTCAGGTACTCGGCGGGGATCCCGGACTACGTCCTNTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK098884             [                                                                GAGGGGGCCATCTCGAGTGGCTCGCCGGCGGCGGCGGAGGCGGGGAGAGATGCTGCCCTACGCGACGGCGGCGGAGGCGGAGGCGGCGCTGGGGAGGGCGATGACGGCGGCGGAGTCGCTGTGGTTCAGGTACTCGGCGGGGATCCCGGACTACGTCCTCTTCTGGCACAACATCCTCTTCCTCTTCGTCGTCTTCACGCTCGCGCCGCTCCCCGTCGCGCTCCTCGAGCTCCGCGCGCCGGCCGCCGTGGGGCCGTTCAAGCTGCAGCCCAAGGTGCGGCTCTCCCGGGAGGAGTTCTTCCGCTGCTACAGGGACGTCATGCGCCTCTTCTTCCTCGTCATCGGCCCGCTCCAGCTCGTGTCCTACCCTACCGTCAAGATGGTGGGAATCCACACAGGGCTGCCACTGCCGTCGCTGGGGGAGATGGCGGCGCAGCTGCTGGTGTACTTCCTGGTTGAGGACTACCTCAACTACTGGATCCATCGGTTGCTACATGGGGAGTGGGGCTATGAGAAGATCCACCGTGTCCACCATGAGTTCACGGCACCCATTGGATTCGCCGCGCCATATGCACACTGGGCTGAGGTGCTCATCCTCGGCATCCCCTCCTTTGTCGGGCCAGCGCTTGCACCTGGTCACATGATCACCTTCTGGCTCTGGA TTGTACT CCGCCAGAT GGAGGCCATAGAGACACACAGCGGCTTTGATTTCCCGTTCAACCTGACAAAGTATATTCCATTCTATGGAGGCGCAGAATACCATGATTATCATCACTATGTTGGACGCCAGAGTCAGAGCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTATATGGAACCGACAAAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGGGTAGTCTTTATGTG                                                      ]
[+] EMBL AK061779             [                                                                      GCCATCTCGAGTGGCTCGCCGGCGGCGGCGGAGGCGGGGAGAGATGCTGCCCTACGCGACGGCGGCGGAGGCGGAGGCGGCGCTGGGGAGGGCGATGACGGCGGCGGAGTCGCTGTGGTTCAGGTACTCGGCGGGGATCCCGGACTACGTCCTCTTCTGGCACAACATCCTCTTCCTCTTCGTCGTCTTCACGCTCGCGCCGCTCCCCGTCGCGCTCCTCGAGCTCCGCGCGCCGGCCGCCGTGGGGCCGTTCAAGCTGCAGCCCAAGGTGCGGCTCTCCCGGGAGGAGTTCTTCCGCTGCTACAGGGACGTCATGCGCCTCTTCTTCCTCGTCATCGGCCCGCTCCAGCTCGTGTCCTACCCTACCGTCAAGATGGTGGGAATCCACACAGGGCTGCCACTGCCGTCGCTGGGGGAGATGGCGGCGCAGCTGCTGGTGTACTTCCTGGTTGAGGACTACCTCAACTACTGGATCCATCGGTTGCTACATGGGGAGTGGGGCTATGAGAAGATCCACCGTGTCCACCATGAGTTCACGGCACCCATTGGATTCGCCGCGCCATATGCACACTGGGCTGAGGTGCTCATCCTCGGCATCCCCTCCTTTGTCGGGCCAGCGCTTGCACCTGGTCACATGATCACCTTCTGGCTCTGGA TTGTACT CCGCCAGAT GGAGGCCATAGAGACACACAGCGGCTTTGATTTCCCGTTCAACCTGACAAAGTATATTCCATTCTATGGAGGCACAGAATACCATGATTATCATCACTATGTTGGACGCCAGAGTCAGAGCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTATATGGAACCGACAAAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGGGTAGTCTTTATGTGGTTTGCGCTCAACTTGAAAGAGTCAGAAC                         ]
[+] EMBL C97849               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGGAATTGGGNCTATGAGAAGATCCACNGTGTCCACCATGAGTTCACGGCACCCATTGNATTCGCCGCGCCATATGCACACTGGGCTGAGGTGCTCATCCTCGGCATCCCCTCCTTTGTCGGGCCAGCGCTTGCACCTGGTCACATGATCACCTTCTGGCTCTGGA TTGTACT CCGCCAGAT GGAGGCCATAGAGACACACAGCGGCTTTGATTTCCCGTTCAACCTGACAAAGTATATTCCATTCTATGGAGGCGCAGAATNCCATGATTATCATCACTATGTTGGACGCCAGAGTCAGAGCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTATATGGAACCGACAAAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGA NTACGCGAAGTTGGATTAAACTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGGGTAGTCTTTATGTGGTTTGCGCTCAACTTGAAAGAGTCAGAACCAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB653493             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCACCGTGTCCACCATGAGTTCACGGCACCCATTGGATTCGCCGCGCCATATGCACACTGGGCTGAGGTGCTCATCCTCGGCATCCCCTCCTTTGTCGGGCCAGCGCTTGCACCTGGTCACATGATCACCTTCTGGCTCTGGA TTGTACT CCGCCAGAT GGAGGCCATAGAGACACACAGCGGCTTTGATTTCCCGTTCAACCTGACAAAGTATATTCCATTCTATGGAGGCGCAGAATACCATGATTATCATCACTATGTTGGACGCCAGAGTCAGAGCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTATATGGAACCGACAAAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGGGTCGGGTAGTCTTTATGTGG                                                     ]
[+] EMBL BI807634             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGATTTGTACTCCCGCCAGATGGGAGCCCATAGAGACACACA CGGCTTTGATTTCCCGTTCAACCTGACAAAGTATATTCCATTCTATGGAGGC CAGAATACCATGATTATCATCACTATGTTGGACGCCAGAGTCAGAGCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTATATGGAACCGAC AAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCCTATATATAGCC AAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTG TTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGGGTAGTCTCTAaaaaaa                                                    ]
[+] EMBL CF328910             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTATATGGAACCGACAAAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGGGTAGTCTTTATGTGGTTTGCGCTCAAaaa                                       ]
[-] EMBL CF328909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTATATGGAACCGACAAAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGGGTAGTCTTTATGTGGTTTGCGCTCAAaaaa                                      ]


>consensus_12840#0 CGACGCGAGGCCACTCGAAGCGGCATTTTGCACCTAACCCCCTAGAGTTATCGGGAATCG CAAAGAGGGGGCCATCTCGAGTGGCTCGCCGGCGGCGGCGGAGGCGGGGAGAGATGCTGC CCTACGCGACGGCGGCGGAGGCGGAGGCGGCGCTGGGGAGGGCGATGACGGCGGCGGAGT CGCTGTGGTTCAGGTACTCGGCGGGGATCCCGGACTACGTCCTCTTCTGGCACAACATCC TCTTCCTCTTCGTCGTCTTCACGCTCGCGCCGCTCCCCGTCGCGCTCCTCGAGCTCCGCG CGCCGGCCGCCGTGGGGCCGTTCAAGCTGCAGCCCAAGGTGCGGCTCTCCCGGGAGGAGT TCTTCCGCTGCTACAGGGACGTCATGCGCCTCTTCTTCCTCGTCATCGGCCCGCTCCAGC TCGTGTCCTACCCTACCGTCAAGATGGTGGGAATCCACACAGGGCTGCCACTGCCGTCGC TGGGGGAGATGGCGGCGCAGCTGCTGGTGTACTTCCTGGTTGAGGACTACCTCAACTACT GGATCCATCGGTTGCTACATGGGGAGTGGGGCTATGAGAAGATCCACCGTGTCCACCATG AGTTCACGGCACCCATTGGATTCGCCGCGCCATATGCACACTGGGCTGAGGTGCTCATCC TCGGCATCCCCTCCTTTGTCGGGCCAGCGCTTGCACCTGGTCACATGATCACCTTCTGGC TCTGGATTGTACTCCGCCAGATGGAGGCCATAGAGACACACAGCGGCTTTGATTTCCCGT TCAACCTGACAAAGTATATTCCATTCTATGGAGGCGCAGAATACCATGATTATCATCACT ATGTTGGACGCCAGAGTCAGAGCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTAT ATGGAACCGACAAAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGG GGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAA CTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTT GTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGT TTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTG ACTCGGGTAGTCTTTATGTGGTTTGCGCTCAACTTGAAAGAGTCAGAACCAAAAAAAAAA AAAAAAAAAAAAAA



consensusID : consensus_12840#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 329
fasta sequence
                              [GNCCACGCGTCCGCGGACGGTGGTGNGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGGGTAGTCTTTATGTGGTTTGCGCTCAAAAA]

[+] EMBL AU161472             [GNCCACGCGTCCGCGGACGGTGGTGNGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAGTGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGTGGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGGGTAGTCTTTATGTGGTTTGCGCTCAAAAA]


>consensus_12840#1 GNCCACGCGTCCGCGGACGGTGGTGNGCGTACCAAGCAAAGATGAAGGCTCTGGGGCAAA CGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAACTGTCC TATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGCTTGTGTAG TGTTTTGATTTTGTTTCGATTTCTGTAGTAGTGTCGTGCTGCTGTGCCTTTTGTTTTTGT GGCTGTGACTTGTGAGCATCCATGGAACTTGTTACGCTGACCAATAACATTGTGACTCGG GTAGTCTTTATGTGGTTTGCGCTCAAAAA



consensusID : consensus_12840#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 286
fasta sequence
                              [GTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGGCTTGTGTAGTGTTTTGATATTTGTTTCGATATTCTGTAGTAGATGTTCGTGCTGACTGTGCCTTTTGTTTTGTGGCTGTGACATTGTGAGCATCCCATGGAAACTTGGTTTACGCCTGAACCAATAACATTGTGACTCGGGGTAGTCTCTATGTGGTTTGCGCTCAACTTGAAAGAGTCAGAAACCAATTGCTGTATATGTTTTTTTTTTTTGGGTGAAATATGCGCTGT]

[+] EMBL AA751782             [GTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGGCTTGTGTAGTGTTTTGATATTTGTTTCGATATTCTGTAGTAGATGTTCGTGCTGACTGTGCCTTTTGTTTTGTGGCTGTGACATTGTGAGCATCCCATGGAAACTTGGTTTACGCCTGAACCAATAACATTGTGACTCGGGGTAGTCTCTATGTGGTTTGCGCTCAACTTGAAAGAGTCAGAAACCAATTGCTGTATATGTTTTTTTTTTTTGGGTGAAATATGCGCTGT]


>consensus_12840#2 GTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGGCTTG TGTAGTGTTTTGATATTTGTTTCGATATTCTGTAGTAGATGTTCGTGCTGACTGTGCCTT TTGTTTTGTGGCTGTGACATTGTGAGCATCCCATGGAAACTTGGTTTACGCCTGAACCAA TAACATTGTGACTCGGGGTAGTCTCTATGTGGTTTGCGCTCAACTTGAAAGAGTCAGAAA CCAATTGCTGTATATGTTTTTTTTTTTTGGGTGAAATATGCGCTGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12840#0      CGACGCGAGGCCACTCGAAGCGGCATTTTGCACCTAACCCCCTAGAGTTATCGGGAATCG 60
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      CAAAGAGGGGGCCATCTCGAGTGGCTCGCCGGCGGCGGCGGAGGCGGGGAGAGATGCTGC 120
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      CCTACGCGACGGCGGCGGAGGCGGAGGCGGCGCTGGGGAGGGCGATGACGGCGGCGGAGT 180
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      CGCTGTGGTTCAGGTACTCGGCGGGGATCCCGGACTACGTCCTCTTCTGGCACAACATCC 240
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      TCTTCCTCTTCGTCGTCTTCACGCTCGCGCCGCTCCCCGTCGCGCTCCTCGAGCTCCGCG 300
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      CGCCGGCCGCCGTGGGGCCGTTCAAGCTGCAGCCCAAGGTGCGGCTCTCCCGGGAGGAGT 360
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      TCTTCCGCTGCTACAGGGACGTCATGCGCCTCTTCTTCCTCGTCATCGGCCCGCTCCAGC 420
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      TCGTGTCCTACCCTACCGTCAAGATGGTGGGAATCCACACAGGGCTGCCACTGCCGTCGC 480
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      TGGGGGAGATGGCGGCGCAGCTGCTGGTGTACTTCCTGGTTGAGGACTACCTCAACTACT 540
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      GGATCCATCGGTTGCTACATGGGGAGTGGGGCTATGAGAAGATCCACCGTGTCCACCATG 600
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      AGTTCACGGCACCCATTGGATTCGCCGCGCCATATGCACACTGGGCTGAGGTGCTCATCC 660
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      TCGGCATCCCCTCCTTTGTCGGGCCAGCGCTTGCACCTGGTCACATGATCACCTTCTGGC 720
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      TCTGGATTGTACTCCGCCAGATGGAGGCCATAGAGACACACAGCGGCTTTGATTTCCCGT 780
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      TCAACCTGACAAAGTATATTCCATTCTATGGAGGCGCAGAATACCATGATTATCATCACT 840
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      ATGTTGGACGCCAGAGTCAGAGCAATTTCGCTTCTGTTTTCACGTATTGTGATTATCTAT 900
consensus_12840#1      ------------------------------------------------------------
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      ATGGAACCGACAAAGGTTACAGATACCATAAGGCGTACCAAGCAAAGATGAAGGCTCTGG 960
consensus_12840#1      -----GNCCACGC-GTCCGCGGACGGTGGTGNGCGTACCAAGCAAAGATGAAGGCTCTGG 54
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      GGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAA 1020
consensus_12840#1      GGCAAACGGAAGGCGAGAAAGCAGATAGCAATGGATTGAGCTACGCGAAGTTGGATTAAA 114
consensus_12840#2      ------------------------------------------------------------
                                                                                   

consensus_12840#0      CTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGG-CT 1079
consensus_12840#1      CTGTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGG-CT 173
consensus_12840#2      --GTCCTATATATAGCCAAAATCTGGAATGCCTCCCTGGTCATTTTGTTCGTTACGGGCT 58
                         ******************************************************* **

consensus_12840#0      TGTGTAGTGTTTTGAT-TTTGTTTCGAT-TTCTGTAGTAG-TGT-CGTGCTG-CTGTGCC 1134
consensus_12840#1      TGTGTAGTGTTTTGAT-TTTGTTTCGAT-TTCTGTAGTAG-TGT-CGTGCTG-CTGTGCC 228
consensus_12840#2      TGTGTAGTGTTTTGATATTTGTTTCGATATTCTGTAGTAGATGTTCGTGCTGACTGTGCC 118
                       **************** *********** *********** *** ******* *******

consensus_12840#0      TTTTGTTTTTGTGGCTGTGAC-TTGTGAGCATCC-ATGGAA-CTTG--TTACGCT--GAC 1187
consensus_12840#1      TTTTGTTTTTGTGGCTGTGAC-TTGTGAGCATCC-ATGGAA-CTTG--TTACGCT--GAC 281
consensus_12840#2      TTTTGTTTT-GTGGCTGTGACATTGTGAGCATCCCATGGAAACTTGGTTTACGCCTGAAC 177
                       ********* *********** ************ ****** ****  ******    **

consensus_12840#0      CAATAACATTGTGACTCGGG-TAGTCTTTATGTGGTTTGCGCTCAACTTGAAAGAGTCAG 1246
consensus_12840#1      CAATAACATTGTGACTCGGG-TAGTCTTTATGTGGTTTGCGCTCAA----AAA------- 329
consensus_12840#2      CAATAACATTGTGACTCGGGGTAGTCTCTATGTGGTTTGCGCTCAACTTGAAAGAGTCAG 237
                       ******************** ****** ******************    ***       

consensus_12840#0      AACCAAAAAAAAAAAAAAAAAAAAAAAA--------------------- 1274
consensus_12840#1      -------------------------------------------------
consensus_12840#2      AAACCAATTGCTGTATATGTTTTTTTTTTTTGGGTGAAATATGCGCTGT 286
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)