cluster # 12844

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Oryza sativa
cluster # 12844 cluster # 12844 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12844#0 length = 2018 sequences # 10

consensus_12844#1 length = 360 sequences # 1

consensusID : consensus_12844#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2018
fasta sequence

                              [AGTCAACGACCGCCACGTCGCCTCCAATTCATCCCTCCCAGTGGGCCCCACCACCTCCCCCATGGCGACCGCCGCGACGACCTCCGCCGCCGCAATCCCCACCGGCGGCGGCGGTCGCCGGCAGCATCCCCACCCGCGCCGCCCAGGCCTCCGCCCGCGCCGCCTCCACCGCCTCCGCCTCCCTGCCCAAGCAGCCGCCGCGGCGGCCGCCTCTTCTCCATCCACGTCGTCGTCGTCGTCGTCGTCGTCTACTCCGGCGGAGGGAG-GAGGGCGGCTGGTGGCGGAGCTGGTGGGCGCGTTCAACGAGCTGACGGGGAGGATGGGGGAGGGCCTGGCCACCTCGTCGTCGTCGCGCCTCCTCTTCCGCGCGCTCAAGCTCGCCCTCCCCGCCCTCCGCGACGGCGACGGCGGCCGGGCTCTCGCCCGCGCGCTCGCTATCGCCGCCTCCCTCGCCGACCTCCAGATGGACGCCGAAGTTATTTCAGCCGGAATACTGAGGGAAGCACTTGATGCAGGAGCAATAAGCATGAGGGATGTCAAATCTGAGATTGGGATCAGCACAGCTCATTTGCTGCACGAGAGTTTACGGCTTAAGCATGCCCCTTCAAAGCTTGATGTACTTGATGATGAAAGTGCAAGTGCATTGAGAAAGTTTTGTCTTTCTTACTATGACATCCGAGCAGTTATCTTGGAACTTGCTCTAAAGCTCGATATGATGAGACACCTTGACTGCCTCCCGAGATATCTTCAGCGGATAAAGTCTCTTGAAGTCCTGAAGATATATGCCCCACTTGCCCATGCTGTTGGAGCTGGTAATCTATCACTGGAGCTAGAGGATCTTTCATTTCGCTATTTGTTTCCGCATTCATATGACCATATTGATCAATGGTTGAGGAGCCAAGAGACTGAGAACAAGCTCTTAATAGATTCGTACAAGGAGCAGTTGCTTCAGGCACTGAAAGATGATGATGAGTTGAGCCAGATTGTGCAAGACATCTCAATTCAAGGGCGGTATAAAAGCCGTTTCAGTACTATGAAAAAGCTAGTAAAAGATGGCAGAAAACCAGAAGAAGTAAATGACATACTAGCTTTAAGGGTAATCTTAGAACCTCGGTGTGATGGCAGCTCGTTAGACTGGGGCCCTAGGGCTTGTCACAGGACACATGAAATCATTCAAGCTATGTGGAAAGAAGTTCCAGGAAGGACAAAAAATTATGTCACACGGCCAAAAGAAAATGGTTACCAGAGCTTGCATGTGGCCATCGATGTAAGTGAACCTGGGAAGATGAGGCCACTGATGGAGATACAGATACGAACCAAGGAGATGCATAAA-TTTGCTGTTGGTGGAGAGGCATCTCACTCTCTCTA-CAAAGGTGGACTTACAGATCCTGGAGAGGCTAAAAGGCTGAAGGCTATCATGTTGGCTGCAGCAGAGTTAGCAGCTATGCGTCTTCGTGACCTCCCAGCTAGTGATCAAGGAGACAGCAACTGCACGAACCGTGCTTTCTGCCAGCTTGATAAAAACGGTGATGGAAGGATCAGTATTGAGGAGCTCACAGAGGTGATGGAAGACCTTGGTGCTGGGGGCAAAGATGCT-AAGGAGCTCA-TGCATCTTCT-CGACGCAAACAGCGATGGCTCCTTGAGCTCCGATGAATTCGAAGCATTCCAGAGACAGATCGAACTGATGAGAAGCTTGGACGACAAAGACGATCGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTGATTATATATATGTTCATGGAGTTCTACGCAAGCCTGGATAAGTTGTATTATTTCTTGATTAAAAATTGTGTGGTTGGATTTTCCACATAGCAACAAAA]

[+] EMBL AK121808             [AGTCAACGACCGCCACGTCGCCTCCAATTCATCCCTCCCAGTGGGCCCCACCACCTCCCCCATGGCGACCGCCGCGACGACCTCCGCCGCCGCAATCCCCACCGGCGGCGGCGGTCGCCGGCAGCATCCCCACCCGCGCCGCCCAGGCCTCCGCCCGCGCCGCCTCCACCGCCTCCGCCTCCCTGCCCAAGCAGCCGCCGCGGCGGCCGCCTCTTCTCCATCCACGTCGTCGTCGTCGTCGTCGTCGTCTACTCCGGCGGAGGGAG GAGGGCGGCTGGTGGCGGAGCTGGTGGGCGCGTTCAACGAGCTGACGGGGAGGATGGGGGAGGGCCTGGCCACCTCGTCGTCGTCGCGCCTCCTCTTCCGCGCGCTCAAGCTCGCCCTCCCCGCCCTCCGCGACGGCGACGGCGGCCGGGCTCTCGCCCGCGCGCTCGCTATCGCCGCCTCCCTCGCCGACCTCCAGATGGACGCCGAAGTTATTTCAGCCGGAATACTGAGGGAAGCACTTGATGCAGGAGCAATAAGCATGAGGGATGTCAAATCTGAGATTGGGATCAGCACAGCTCATTTGCTGCACGAGAGTTTACGGCTTAAGCATGCCCCTTCAAAGCTTGATGTACTTGATGATGAAAGTGCAAGTGCATTGAGAAAGTTTTGTCTTTCTTACTATGACATCCGAGCAGTTATCTTGGAACTTGCTCTAAAGCTCGATATGATGAGACACCTTGACTGCCTCCCGAGATATCTTCAGCGGATAAAGTCTCTTGAAGTCCTGAAGATATATGCCCCACTTGCCCATGCTGTTGGAGCTGGTAATCTATCACTGGAGCTAGAGGATCTTTCATTTCGCTATTTGTTTCCGCATTCATATGACCATATTGATCAATGGTTGAGGAGCCAAGAGACTGAGAACAAGCTCTTAATAGATTCGTACAAGGAGCAGTTGCTTCAGGCACTGAAAGATGATGATGAGTTGAGCCAGATTGTGCAAGACATCTCAATTCAAGGGCGGTATAAAAGCCGTTTCAGTACTATGAAAAAGCTAGTAAAAGATGGCAGAAAACCAGAAGAAGTAAATGACATACTAGCTTTAAGGGTAATCTTAGAACCTCGGTGTGATGGCAGCTCGTTAGACTGGGGCCCTAGGGCTTGTCACAGGACACATGAAATCATTCAAGCTATGTGGAAAGAAGTTCCAGGAAGGACAAAAAATTATGTCACACGGCCAAAAGAAAATGGTTACCAGAGCTTGCATGTGGCCATCGATGTAAGTGAACCTGGGAAGATGAGGCCACTGATGGAGATACAGATACGAACCAAGGAGATGCATAAA TTTGCTGTTGGTGGAGAGGCATCTCACTCTCTCTA CAAAGGTGGACTTACAGATCCTGGAGAGGCTAAAAGGCTGAAGGCTATCATGTTGGCTGCAGCAGAGTTAGCAGCTATGCGTCTTCGTGACCTCCCAGCTAGTGATCAAGGAGACAGCAACTGCACGAACCGTGCTTTCTGCCAGCTTGATAAAAACGGTGATGGAAGGATCAGTATTGAGGAGCTCACAGAGGTGATGGAAGACCTTGGTGCTGGGGGCAAAGATGCT AAGGAGCTCA TGCATCTTCT CGACGCAAACAGCGATAGCTCCTTGAGCTCCGATGAATTCGAAGCATTCCAGAGACAGATCGAACTGATGAGAAGCTTGGACGACAAAGACGATCGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTGATTATATATATGTTCATGGAGTTCTACGCAAGCCTGGATAAGTTGTATTATTTCTTGATTATTTTTTGTGTGGTTGGATTTTCCACATAGCAACAAAA]
[+] EMBL AB042936             [                 TCGCCTCCAATTCATCCCTCCCAGTGGGCCCCACCACCTCCCCCATGGCGACCGCCGCGACGACCTCCGCCGCCGCAATCCCCACCGGCGGCGGCGGTCGCCGGCAGCATCCCCACCCGCGCCGCCCAGGCCTCCGCCCGCGCCGCCTCCACCGCCTCCGCCTCCCTGCCCAAGCAGCCGCCGCGGCGGCCGCCTCTTCTCCATCCACGTCGTCGTCGTCGTCGTCGTCGTCTACTCCGGCGGAGGGAG GAGGGCGGCTGGTGGCGGAGCTGGTGGGCGCGTTCAACGAGCTGACGGGGAGGATGGGGGAGGGCCTGGCCACCTCGTCGTCGTCGCGCCTCCTCTTCCGCGCGCTCAAGCTCGCCCTCCCCGCCCTCCGCGACGGCGACGGCGGCCGGGCTCTCGCCCGCGCGCTCGCTATCGCCGCCTCCCTCGCCGACCTCCAGATGGACGCCGAAGTTATTTCAGCCGGAATACTGAGGGAAGCACTTGATGCAGGAGCAATAAGCATGAGGGATGTCAAATCTGAGATTGGGATCAGCACAGCTCATTTGCTGCACGAGAGTTTACGGCTTAAGCATGCCCCTTCAAAGCTTGATGTACTTGATGATGAAAGTGCAAGTGCATTGAGAAAGTTTTGTCTTTCTTACTATGACATCCGAGCAGTTATCTTGGAACTTGCTCTAAAGCTCGATATGATGAGACACCTTAACTGCCTCCCGAGATATCTTCAGCGGATAAAGTCTCTTGAAGTCCTGAAGATATATGCCCCACTTGCCCATGCTGTTGGAGCTGGTAATCTATCACTGGAGCTAGAGGATCTTTCATTTCGCTATTTGTTTCCGCATTCATATGACCATATTGATCAATGGTTGAGGAGCCAAGAGACTGAGAACAAGCTCTTAATAGATTCGTACAAGGAGCAGTTGCTTCAGGCACTGAAAGATGATGATGAGTTGAGCCAGATTGTGCAAGACATCTCAATTCAAGGGCGGTATAAAAGCCGTTTCAGTACTATGAAAAAGCTAGTAAAAGATGGCAGAAAACCAGAAGAAGTAAATGACATACTAGCTTTAAGGGTAATCTTAGAACCTCGGTGTGATGGCAGCTCGTTAGACTGGGGCCCTAGGGCTTGTCACAGGACACATGAAATCATTCAAGCTATGTGGAAAGAAGTTCCAGGAAGGACAAAAAATTATGTCACACGGCCAAAAGAAAATGGTTACCAGAGCTTGCATGTGGCCATCGATGTAAGTGAACCTGGGAAGATGAGGCCACTGATGGAGATACAGATACGAACCAAGGAGATGCATAAA TTTGCTGTTGGTGGAGAGGCATCTCACTCTCTCTA CAAAGGTGGACTTACAGATCCTGGAGAGGCTAAAAGGCTGAAGGCTATCATGTTGGCTGCAGCAGAGTTAGCAGCTATGCGTCTTCGTGACCTCCCAGCTAGTGATCAAGGAGACAGCAACTGCACGAACCGTGCTTTCTGCCAGCTTGATAAAAACGGTGATGGAAGGATCAGTATTGAGGAGCTCACAGAGGTGATGGAAGACCTTGGTGCTGGGGGCAAAGATGCT AAGGAGCTCA TGCATCTTCT CGACGCAAACAGCGATGGCTCCTTGAGCTCCGATGAATTCGAAGCATTCCAGAGACAGATCGAACTGATGAGAAGCTTGGACGACAAAGACGATCGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTGATTATATATATGTTCATGGAGTTCTACGCAAGCCTGGATAAGTTGTATTATTTCTTGATT                                      ]
[+] EMBL CB673650             [                                                                                                                                                                                                                                                                GCGGAGGGAGTGAGGGCGGCTGGTGGCGGAGCTGGTGGGCGCGTTCAACGAGCTGACGGGGAGGATGGGGGAGGGCCTGGCCACCTCGTCGTCGTCGCGCCTCCTCTTCCGCGCGCTCAAGCTCGCCCTCCCCGCCCTCCGCGACGGCGACGGCGGCCGGGCTCTCGCCCGCGCGCTCGCTATCGCCGCCTCCCTCGCCGACCTCCAGATGGACGCCGAAGTTATTTCAGCCGGAATACTGAGGGAAGCACTTGATGCAGGAGCAATAAGCATGAGGGATGTCAAATCTGAGATTGGGATCAGCACAGCTCATTTGCTGCACGAGAGTTTACGGCTTAAGCATGCCCCTTCAAAGCTTGATGTACTTGATGATGAAAGTGCAAGTGCATTGAGAAAGTTTTGTCTTTCTTACTATGACATCCGAGCAGTTATCTTGGAACTTGCTCTAAAGCTCGATATGATGAGACACCTTGACTGCCTCCCGAGATATCTTCAGCGGATAAAGTCTCTTGAAGTCCTGAAGATATATGCCCCACTTGCCCATGCTGTTGGAGCTGGTAATCTATCACTGGAGCTAGAGGATCTTTCATTTCGCTATTTGTTTCCGCATTCATATGACCATATTGATCAATGGTTGAGGAGCCAAGAGACTGAGAACAAGCTCTTAATAGATTCGTACAAGGAGCAGTTGCTTCAGGCACTGAAAGATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BF430714             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCAGGAAGGACAAAAGATTATGTCACACGGCCAAAAGAAAATGGTTACCAGAGCTTGCATGTGGCCATCGATGTAAGTGAACCTGGGAAGATGAGGCCACTGATGGAGATACAGATACGAACCAAGGAGATGCATAAA TTTGCTGTTGGTGGAGAGGCATCTCACTCTCTCTA CAAAGGTGGACTTACAGATCCTGGAGAGGCTAAAAGGCTGAAGGCTATCATGTTGGCTGCAGCAGAGTTAGCAGCTATGCGTCTTCGTGACCTCCCAGCTAGTGATCAAGGAGACAGCAACTGCACGAACCGTGCTTTCTGCCAGCTTGATAAAAACGGTGATGGAAGGATCAGTATTGAGGAGCTCACAGAGGTGATGGAAGACCTTGGTGCTGGGGGCAAAGATGCT AAGGAGCTCA TGCATCTTCT CGACGCAAACAGCGATGGCTCCTTGAGCTCCGATGAATTCGAAGCATTCCAGAGACAGATCGAACTGATGAGAAGCTTGGACGACAAAGACGATGGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTA                                                                                                                                                ]
[+] EMBL OSS15595A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAGGACAAAAAATTATGTCACACGGCCAAAAGAAAATGGTTACCAGAGCTTGCATGTGGCCATCGATGTAAGTGAACCTGGGAAGATGAGGCCACTGATGGAGATACAGATACGAACCAAGGAGATGCATAAA TTTNCTGTTGGTGGAGAGGCATCTCACTCTCTCTA CAAAGGTGGACTTACAGATCCTGGAGAGGCTAAAAGGCTGAAGGCTATCATGTTGGCTGCAGCAGAGTTAGCAGCTATGCGTCTTCGTGACCTCCCAGCTAGTGATCAAGGAGACAGCAACTGCACGAACCGTGCTTTCTGCCAGCTTGATAAAAACGGTGATGGAAGGATCAGTATTGAGGAGCTCACAGAGGTGATGGNAGACCTTGGTGCTGGGGGCAAAGATGCT AAGGNGCTCATTGCAT                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB673651             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACCAGAGCTTGCATGTGGCCATCGATGTAAGTGAACCTGGGAAGATGAGGCCACTGATGGAGATACAGATACGAACCAAGGAGATGCATAAA TTTGCTGTTGGTGGAGAGGCATCTCACTCTCTCTA CAAAGGTGGACTTACAGATCCTGGAGAGGCTAAAAGGCTGAAGGCTATCATGTTGGCTGCAGCAGAGTTAGCAGCTATGCGTCTTCGTGACCTCCCAGCTAGTGATCAAGGAGACAGCAACTGCACGAACCGTGCTTTCTGCCAGCTTGATAAAAACGGTGATGGAAGGATCAGTATTGAGGAGCTCACAGAGGTGATGGAAGACCTTGGTGCTGGGGGCAAAGATGCT AAGGAGCTCA TGCATCTTCT CGACGCAAACAGCGATGGCTCCTTGAGCTCCGATGAATTCGAAGCATTCCAGAGACAGATCGAACTGATGAGAAGCTTGGACGACAAAGACGATCGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTGATTATATATATGTTCATGGAGTTCTACGCAAGCCTGGATAAGTTGTATTATTTCTTGATTATTTTTTGTGTGGTTGGATTTTCCACATAGCAA     ]
[+] EMBL AU197385             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gncCCAAGGAGATGCATAAATTTTGCTGTTGGTGGNGAGGCATCTCACTCTCTCTACCAAAGGTGGACTTACAGATCCTGGAGAGGCTAAAAGGCTGAAGGCTATCATGTTGGCTGCAGCAGAGTTAGCAGCTATGCGTCTTCGTGACCTCCCAGCTAGTGATCAAGGAGACAGCAACTGCACGAACCGTGCTTTCTGCCAGCTTGATAAAAACGGTGATGGAAGGATCAGTATTGAGGAGCTCACAGAGGTGATGGAAGACCTTGGTGCTGGGGGCAAAGATGCT AAGGAGCTCA TGCATCTTCT CGACGCAAACAGCGATGGCTCCTTGAGCTCCGATGAATTCGAAGCATTCCAGAGACAGATCGAACTGATGAGAAGCTTGGACGACAAAGACGATCGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTGATTATATATATGTTCATGGAGTTCTACGCAAaanaaan                                                            ]
[+] EMBL AU056770             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGAGGAGCTCACAGAGGTGATGGAAGACCTTGGTGCTGGGGGCAAAGATGCTAAAGGAGCTCA TGCATCTTCTCCGACGCAAACAGCGATGGCTCCTTGAGCTCCGATGAATTCGAAGCATTCCAGAGACAGATCGAACTGATGAGAAGCTTGGACGACAAAGACGATCGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTGATTATATATATGTTCATGGAGTTCTACGCAAGCCTGGATAAGTTGTATTATTTCTTGATTAAAAA                                 ]
[+] EMBL CF330560             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCAAACAGCGATGGCTCCTTGAGCTCCGATGAATTCGAAGCATTCCAGAGACAGATCGAACTGATGAGAAGCTTGGACGACAAAGACGATCGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTGATTATATATATGTTCATGGAGTTCTACGCAAGCCTGGATAAGTTGTATTATTTCTTGATTAAAAA                                 ]
[-] EMBL CF330559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTCCGATGAATTCGAAGCATTCCAGAGACAGATCGAACTGATGAGAAGCTTGGACGACAAAGACGATCGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTGATTATATATATGTTCATGGAGTTCTACGCAAGCCTGGATAAGTTGTATTATTTCTTGATTAAAAAa                                ]




>consensus_12844#0
AGTCAACGACCGCCACGTCGCCTCCAATTCATCCCTCCCAGTGGGCCCCACCACCTCCCC
CATGGCGACCGCCGCGACGACCTCCGCCGCCGCAATCCCCACCGGCGGCGGCGGTCGCCG
GCAGCATCCCCACCCGCGCCGCCCAGGCCTCCGCCCGCGCCGCCTCCACCGCCTCCGCCT
CCCTGCCCAAGCAGCCGCCGCGGCGGCCGCCTCTTCTCCATCCACGTCGTCGTCGTCGTC
GTCGTCGTCTACTCCGGCGGAGGGAGGAGGGCGGCTGGTGGCGGAGCTGGTGGGCGCGTT
CAACGAGCTGACGGGGAGGATGGGGGAGGGCCTGGCCACCTCGTCGTCGTCGCGCCTCCT
CTTCCGCGCGCTCAAGCTCGCCCTCCCCGCCCTCCGCGACGGCGACGGCGGCCGGGCTCT
CGCCCGCGCGCTCGCTATCGCCGCCTCCCTCGCCGACCTCCAGATGGACGCCGAAGTTAT
TTCAGCCGGAATACTGAGGGAAGCACTTGATGCAGGAGCAATAAGCATGAGGGATGTCAA
ATCTGAGATTGGGATCAGCACAGCTCATTTGCTGCACGAGAGTTTACGGCTTAAGCATGC
CCCTTCAAAGCTTGATGTACTTGATGATGAAAGTGCAAGTGCATTGAGAAAGTTTTGTCT
TTCTTACTATGACATCCGAGCAGTTATCTTGGAACTTGCTCTAAAGCTCGATATGATGAG
ACACCTTGACTGCCTCCCGAGATATCTTCAGCGGATAAAGTCTCTTGAAGTCCTGAAGAT
ATATGCCCCACTTGCCCATGCTGTTGGAGCTGGTAATCTATCACTGGAGCTAGAGGATCT
TTCATTTCGCTATTTGTTTCCGCATTCATATGACCATATTGATCAATGGTTGAGGAGCCA
AGAGACTGAGAACAAGCTCTTAATAGATTCGTACAAGGAGCAGTTGCTTCAGGCACTGAA
AGATGATGATGAGTTGAGCCAGATTGTGCAAGACATCTCAATTCAAGGGCGGTATAAAAG
CCGTTTCAGTACTATGAAAAAGCTAGTAAAAGATGGCAGAAAACCAGAAGAAGTAAATGA
CATACTAGCTTTAAGGGTAATCTTAGAACCTCGGTGTGATGGCAGCTCGTTAGACTGGGG
CCCTAGGGCTTGTCACAGGACACATGAAATCATTCAAGCTATGTGGAAAGAAGTTCCAGG
AAGGACAAAAAATTATGTCACACGGCCAAAAGAAAATGGTTACCAGAGCTTGCATGTGGC
CATCGATGTAAGTGAACCTGGGAAGATGAGGCCACTGATGGAGATACAGATACGAACCAA
GGAGATGCATAAATTTGCTGTTGGTGGAGAGGCATCTCACTCTCTCTACAAAGGTGGACT
TACAGATCCTGGAGAGGCTAAAAGGCTGAAGGCTATCATGTTGGCTGCAGCAGAGTTAGC
AGCTATGCGTCTTCGTGACCTCCCAGCTAGTGATCAAGGAGACAGCAACTGCACGAACCG
TGCTTTCTGCCAGCTTGATAAAAACGGTGATGGAAGGATCAGTATTGAGGAGCTCACAGA
GGTGATGGAAGACCTTGGTGCTGGGGGCAAAGATGCTAAGGAGCTCATGCATCTTCTCGA
CGCAAACAGCGATGGCTCCTTGAGCTCCGATGAATTCGAAGCATTCCAGAGACAGATCGA
ACTGATGAGAAGCTTGGACGACAAAGACGATCGCTACAGGAAGATACTGAAGGAGAAGCT
GCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACT
GCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTAT
ATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTG
ATTATATATATGTTCATGGAGTTCTACGCAAGCCTGGATAAGTTGTATTATTTCTTGATT
AAAAATTGTGTGGTTGGATTTTCCACATAGCAACAAAA

consensusID : consensus_12844#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 360
fasta sequence

                              [TTCTCCGACGCAAACCAGCGATGGCTCCTTGAGCTCCGATGAATTCCGAAGCATTCCAGAGACAGATCGAACTTGATGAGAAGCTTGGACGACNAAAGNCGATCGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTGATTATATATATGTTCATGGNGTTCTACGCAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU101824             [TTCTCCGACGCAAACCAGCGATGGCTCCTTGAGCTCCGATGAATTCCGAAGCATTCCAGAGACAGATCGAACTTGATGAGAAGCTTGGACGACNAAAGNCGATCGCTACAGGAAGATACTGAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATCATTGATTATATATATGTTCATGGNGTTCTACGCAAAAAAAAAAAAAAAAAAA]




>consensus_12844#1
TTCTCCGACGCAAACCAGCGATGGCTCCTTGAGCTCCGATGAATTCCGAAGCATTCCAGA
GACAGATCGAACTTGATGAGAAGCTTGGACGACNAAAGNCGATCGCTACAGGAAGATACT
GAAGGAGAAGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCT
GGGCGACAAACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCA
CCATCTTGCTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTC
TTATTATCATTGATTATATATATGTTCATGGNGTTCTACGCAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12844#0      AGTCAACGACCGCCACGTCGCCTCCAATTCATCCCTCCCAGTGGGCCCCACCACCTCCCC 60
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      CATGGCGACCGCCGCGACGACCTCCGCCGCCGCAATCCCCACCGGCGGCGGCGGTCGCCG 120
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      GCAGCATCCCCACCCGCGCCGCCCAGGCCTCCGCCCGCGCCGCCTCCACCGCCTCCGCCT 180
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      CCCTGCCCAAGCAGCCGCCGCGGCGGCCGCCTCTTCTCCATCCACGTCGTCGTCGTCGTC 240
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      GTCGTCGTCTACTCCGGCGGAGGGAGGAGGGCGGCTGGTGGCGGAGCTGGTGGGCGCGTT 300
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      CAACGAGCTGACGGGGAGGATGGGGGAGGGCCTGGCCACCTCGTCGTCGTCGCGCCTCCT 360
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      CTTCCGCGCGCTCAAGCTCGCCCTCCCCGCCCTCCGCGACGGCGACGGCGGCCGGGCTCT 420
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      CGCCCGCGCGCTCGCTATCGCCGCCTCCCTCGCCGACCTCCAGATGGACGCCGAAGTTAT 480
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      TTCAGCCGGAATACTGAGGGAAGCACTTGATGCAGGAGCAATAAGCATGAGGGATGTCAA 540
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      ATCTGAGATTGGGATCAGCACAGCTCATTTGCTGCACGAGAGTTTACGGCTTAAGCATGC 600
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      CCCTTCAAAGCTTGATGTACTTGATGATGAAAGTGCAAGTGCATTGAGAAAGTTTTGTCT 660
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      TTCTTACTATGACATCCGAGCAGTTATCTTGGAACTTGCTCTAAAGCTCGATATGATGAG 720
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      ACACCTTGACTGCCTCCCGAGATATCTTCAGCGGATAAAGTCTCTTGAAGTCCTGAAGAT 780
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      ATATGCCCCACTTGCCCATGCTGTTGGAGCTGGTAATCTATCACTGGAGCTAGAGGATCT 840
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      TTCATTTCGCTATTTGTTTCCGCATTCATATGACCATATTGATCAATGGTTGAGGAGCCA 900
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      AGAGACTGAGAACAAGCTCTTAATAGATTCGTACAAGGAGCAGTTGCTTCAGGCACTGAA 960
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      AGATGATGATGAGTTGAGCCAGATTGTGCAAGACATCTCAATTCAAGGGCGGTATAAAAG 1020
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      CCGTTTCAGTACTATGAAAAAGCTAGTAAAAGATGGCAGAAAACCAGAAGAAGTAAATGA 1080
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      CATACTAGCTTTAAGGGTAATCTTAGAACCTCGGTGTGATGGCAGCTCGTTAGACTGGGG 1140
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      CCCTAGGGCTTGTCACAGGACACATGAAATCATTCAAGCTATGTGGAAAGAAGTTCCAGG 1200
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      AAGGACAAAAAATTATGTCACACGGCCAAAAGAAAATGGTTACCAGAGCTTGCATGTGGC 1260
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      CATCGATGTAAGTGAACCTGGGAAGATGAGGCCACTGATGGAGATACAGATACGAACCAA 1320
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      GGAGATGCATAAATTTGCTGTTGGTGGAGAGGCATCTCACTCTCTCTACAAAGGTGGACT 1380
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      TACAGATCCTGGAGAGGCTAAAAGGCTGAAGGCTATCATGTTGGCTGCAGCAGAGTTAGC 1440
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      AGCTATGCGTCTTCGTGACCTCCCAGCTAGTGATCAAGGAGACAGCAACTGCACGAACCG 1500
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      TGCTTTCTGCCAGCTTGATAAAAACGGTGATGGAAGGATCAGTATTGAGGAGCTCACAGA 1560
consensus_12844#1      ------------------------------------------------------------
                                                                                   

consensus_12844#0      GGTGATGGAAGACCTTGGTGCTGGGGGCAAAGATGCTAAGGAGCTCATGCATCTTCTCGA 1620
consensus_12844#1      ----------------------------------------------------TTCTCCGA 8
                                                                            *   ***

consensus_12844#0      CGCAAAC-AGCGATGGCTCCTTGAGCTCCGATGAATTC-GAAGCATTCCAGAGACAGATC 1678
consensus_12844#1      CGCAAACCAGCGATGGCTCCTTGAGCTCCGATGAATTCCGAAGCATTCCAGAGACAGATC 68
                       ******* ****************************** *********************

consensus_12844#0      GAACT-GATGAGAAGCTTGGACGACAAA-GACGATCGCTACAGGAAGATACTGAAGGAGA 1736
consensus_12844#1      GAACTTGATGAGAAGCTTGGACGACNAAAGNCGATCGCTACAGGAAGATACTGAAGGAGA 128
                       ***** ******************* ** * *****************************

consensus_12844#0      AGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACA 1796
consensus_12844#1      AGCTGCAGACGATTGACAGCGCGGGTCTCATTCAGGTCTACCGCAAACAGCTGGGCGACA 188
                       ************************************************************

consensus_12844#0      AACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTG 1856
consensus_12844#1      AACTGCTTGTAAGCTAAAACTGAAGCTTAGCACAGGTGACGAAACTAATCCACCATCTTG 248
                       ************************************************************

consensus_12844#0      CTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATC 1916
consensus_12844#1      CTATATAGGCTATGGCTACTATCTGTCTGCATACTGCATTCAGGGTACGCTCTTATTATC 308
                       ************************************************************

consensus_12844#0      ATTGATTATATATATGTTCATGGAGTTCTACGCAAGCCTGGATAAGTTGTATTATTTCTT 1976
consensus_12844#1      ATTGATTATATATATGTTCATGGNGTTCTACGCAAAAAAAAAAAAAAAAAAA-------- 360
                       *********************** ***********      * **     *         

consensus_12844#0      GATTAAAAATTGTGTGGTTGGATTTTCCACATAGCAACAAAA 2018
consensus_12844#1      ------------------------------------------