These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12846#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2431 fasta sequence [TCCTTCGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCACTGCCAGGGGCTGTAACCACTCATGCATCAACCAGGAGATTTGGAGGTTCACAATTTCAGACATCTCAAGCTAGCTGCATCTCATTTAAAAGGGAAGTGTCTGCTAAAGCAGTATTAAGAGTAAGTTGGAATATATCATAGATTCATATCTACCTCAATCTTCCTATAAACAAAATTAAGTGTTCAATTCCTGCAAACAAATTTACTATTTTCTGTTTGGTTAGCTTATTGTGAGTTCATGACAATAAGGCATTTGATCAATAACCAAATTGGCATGTATCACCCTCTTTTTATTATATATGATTATATATAGATTCTATAGAAAAATTGAATTAGGAGTTACTGTTACTCCCTCCGACTCAAAATATGACAACTTAGGACCAGATTGGACACCCCTGTCCAAATTCGTAGTACTAGGATATGTCCAATTCTGTCCTAGTTGCTATATTTTGGGACTGAGGAGTATGAACTATGAAATATTCATGTTAAAATGGTTTAGTTCAAAATACAGTAGATAAGGATTTTACCATACTTGATTGGTTTATTGGTTATACCCTTCCTAGCTAGTACTAATCGTAGTGCTCAATAGGTGCATATCTCATGGGCCATGGCATGTGCATGCTGCATACATTTAAAGATAAGGTGCTTTGAATTGTTAATTAGTAGATAAAACTGCATCAGCTACCACTACAATTTTGATGGTATCAACAAAACATTTCAGTATTTCACCTCTAATATATACCAGCAAGTTGGTCTAAAAATTCGAAATACCTCTTCTGTTACATTTGAAGGCAACGGTGTTAGATAAGGGTGATTTATTGATTTTGTCCTTACGTGAATATTAAATTGTTGCACTACCAAATCTCACATCTCTCCAGCAGCCAGTAGTAGTGGCCGGCGGCATCATTAGTGTCGCTGGAGGTGGGCAACAAGTTAATGGAGCAAAGAGACGTGGGCGGTCAAGGCATCAGAGCGTCTGCAGCCTGGCCGAGACCCCCACCTCTGAGCGGCCTCACCATGGGGGTCAGTGTGAGCAGTGTGGCTGGGCTGAGAGCATTGGCTGTGGATGCATACAACCAGGCTGAGGACTGCACTGCCAGGTGGCCTCAGATGTTGACACAGGTCCTAGGTGGAGCCTAATGAGATCAAGATCATAAGAACATGCTTTTCCTGGTTTCTTGCTTCCCTCTTAGCACGGTAGATTGAGCAGCCAAGCCAAGTAGTGTCACCTCCATGATGAAGACAGCAAGCAGTGGGTATTGCAGTCATTCTGCGTGGTAAAAAAAAGGGGTCAAAACCGAAATAGGAACAAAGCATGACAGGGGATGTAATGTTCTGATGTTATTTATTGGGATCACTGAAACTCTGGTGGTATAGATGCAGTTTTTTCTTAATAGTAGTACTAAAAGAAGCAATATTATCCCTGGTACATGGTCAATCTCAATGATTAATATATGTTCTGAATTATTCATGATGCTTTACCTCCAGTTACTGAACTTCAAAACTGATGAAAGGGAAAATGCTAGCTTGCTTATCTGCATACTTCACTGTCAGATCTTCTCATTGACTGCTTTTTTGTGCGAACGCTATTGACAACAGAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTG-GTGGCGGCGGAGGTGG-TGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTGAGTTCAGTGCTGTGGTACATCCAAATGGACCGTATTATTGCAGGTGTTGAAATTGGAATGCTTTTTGGAATGTTGAATCGCAAATTGACCCTTTAAAAAAAAA] [+] EMBL AK099750 [TCCTTCGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCACTGCCAGGGGCTGTAACCACTCATGCATCAACCAGGAGATTTGGAGGTTCACAATTTCAGACATCTCAAGCTAGCTGCATCTCATTTAAAAGGGAAGTGTCTGCTAAAGCAGTATTAAGAGTAAGTTGGAATATATCATAGATTCATATCTACCTCAATCTTCCTATAAACAAAATTAAGTGTTCAATTCCTGCAAACAAATTTACTATTTTCTGTTTGGTTAGCTTATTGTGAGTTCATGACAATAAGGCATTTGATCAATAACCAAATTGGCATGTATCACCCTCTTTTTATTATATATGATTATATATAGATTCTATAGAAAAATTGAATTAGGAGTTACTGTTACTCCCTCCGACTCAAAATATGACAACTTAGGACCAGATTGGACACCCCTGTCCAAATTCGTAGTACTAGGATATGTCCAATTCTGTCCTAGTTGCTATATTTTGGGACTGAGGAGTATGAACTATGAAATATTCATGTTAAAATGGTTTAGTTCAAAATACAGTAGATAAGGATTTTACCATACTTGATTGGTTTATTGGTTATACCCTTCCTAGCTAGTACTAATCGTAGTGCTCAATAGGTGCATATCTCATGGGCCATGGCATGTGCATGCTGCATACATTTAAAGATAAGGTGCTTTGAATTGTTAATTAGTAGATAAAACTGCATCAGCTACCACTACAATTTTGATGGTATCAACAAAACATTTCAGTATTTCACCTCTAATATATACCAGCAAGTTGGTCTAAAAATTCGAAATACCTCTTCTGTTACATTTGAAGGCAACGGTGTTAGATAAGGGTGATTTATTGATTTTGTCCTTACGTGAATATTAAATTGTTGCACTACCAAATCTCACATCTCTCCAGCAGCCAGTAGTAGTGGCCGGCGGCATCATTAGTGTCGCTGGAGGTGGGCAACAAGTTAATGGAGCAAAGAGACGTGGGCGGTCAAGGCATCAGAGCGTCTGCAGCCTGGCCGAGACCCCCACCTCTGAGCGGCCTCACCATGGGGGTCAGTGTGAGCAGTGTGGCTGGGCTGAGAGCATTGGCTGTGGATGCATACAACCAGGCTGAGGACTGCACTGCCAGGTGGCCTCAGATGTTGACACAGGTCCTAGGTGGAGCCTAATGAGATCAAGATCATAAGAACATGCTTTTCCTGGTTTCTTGCTTCCCTCTTAGCACGGTAGATTGAGCAGCCAAGCCAAGTAGTGTCACCTCCATGATGAAGACAGCAAGCAGTGGGTATTGCAGTCATTCTGCGTGGTAAAAAAAAGGGGTCAAAACCGAAATAGGAACAAAGCATGACAGGGGATGTAATGTTCTGATGTTATTTATTGGGATCACTGAAACTCTGGTGGTATAGATGCAGTTTTTTCTTAATAGTAGTACTAAAAGAAGCAATATTATCCCTGGTACATGGTCAATCTCAATGATTAATATATGTTCTGAATTATTCATGATGCTTTACCTCCAGTTACTGAACTTCAAAACTGATGAAAGGGAAAATGCTAGCTTGCTTATCTGCATACTTCACTGTCAGATCTTCTCATTGACTGCTTTTTTGTGCGAACGCTATTGACAACAGAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTG GTGGCGGCGGAGGTGG TGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCCGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTGAGTTCAGTGCTGTGGTACATCCAAATGGACCGTATTATTGCAGGTGTTGAAATTGGAATGCTTTTTGGAAT ] [+] EMBL CB669412 [ CGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCACTGCCAGGGGCTGTAACCACTCATGCATCAACCAGGAGATTTGGAGGTTCACAATTTCAGACATCTCAAGCTAGCTGCATCTCATTTAAAAGGGAAGTGTCTGCTAAAGCAGTATTAAGAGTAAGTTGGAATATATCATAGATTCATATCTACCTCAATCTTCCTATAAACAAAATTAAGTGTTCAATTCCTGCAAACAAATTTACTATTTTCTGTTTGGTTAGCTTATTGTGAGTTCATGACAATAAGGCATTTGATCAATAACCAAATTGGCATGTATCACCCTCTTTTTATTATATATGATTATATATAGATTCTATAGAAAAATTGAATTAGGAGTTACTGTTACTCCCTCCGACCCAAAATATGACAACTTAGGACCAGATTGGACACCCCTGTCCAAATTCGTAGTACTAGGATATGTCCAATTCTGTCCTAGTTGCTATATTTTGGGACTGAGGAGTATGAACTATGAAATATTCATGTTAAAATGGTTTAGTTCAAAATACAGTAGATAAGGATTTTACCATACTTGATTGGTTTATTGGTTATACCCTTCCTAGC ] [+] EMBL AK061802 [ TAAATTGTTGCACTACCAAATCTCACATCTCTCCAGCAGCCAGTAGTAGTGGCCGGCGGCATCATTAGTGTCGCTGGAGGTGGGCAACAAGTTAATGGAGCAAAGAGACGTGGGCGGTCAAGGCATCAGAGCGTCTGCAGCCTGGCCGAGACCCCCACCTCTGAGCGGCCTCACCATGAGGGTCAGTGTGAGCAGTGTGGCTGGGCTGAGAGCATTGGCTGTGGATGCATACAACCAGGCTGAGGACTGCACTGCCAGGTGGCCTCAGATGTTGACACAGGTCCTAGGTGGAGCCTAATGAGATCAAGATCATAAGAACATGCTTTTCCTGGTTTCTTGCTTCCCTCTTAGCACGGTAGATTGAGCAGCCAAGCCAAGTAGTGTCACCTCCATGATGAAGACAGCAAGCAGTGGGTATTGCAGTCATTCTGCGTGGTAAAAAAAAGGGGTCAAAACCGAAATAGGAACAAAGCATGACAGGGGATGTAATGTTCTGATGTTATTTATTGGGATCACTGAAACTCTGGTGGTATAGATGCAGTTTTTTCTTAATAGTAGTACTAAAAGAAGCAATATTATCCCTGGTACATGGTCAATCTCAATGATTAATATATGTTCTGAATTATTCATGATGCTTTACCTCCAGTTACTGAACTTCAAAACTGATGAAAGGGAAAATGCTAGCTTGCTTATCTGCATACTTCACTGTCAGATCTTCTCATTGACTGCTTTTTTGTGCGAACGCTATTGACAACAGAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTG GTGGCGGCGGAGGTGG TGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTGAGTTCAGTGCTGTGGTACATCCAAATGGACCGTATTATTGCAGGTGTTGAAATTGGAATGCTTTTTGGAAT ] [-] EMBL CF311377 [ taagaAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTG GTGGCGGCGGAGGTGG TGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACCTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTGAGTTCAGTGCTGTGGTACATCCAAATGGACCGTATTATTGCAGGTGTTGAAATTGGAATGCTTTTTGGAATGTTGAATCGCAAATTGACCCTTTAAAA ] [+] EMBL BI803429 [ CCAAAGGAAAAACTCA GGGCCAAAATTGGATGAT GGACCGGT GTTTTCCTCCATTCCGTTTCGGCAAA GT GT GT GC GCGGA GTGG TGGAGGT GCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGAT CAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTGAGTTCAGTGCTGTGGTACATCC AATGGACCGTATTATTGCAGGTGTTGAAATTGGAATGCTTTTTGGAATGTTGAATC C AATTGACCCTTTTGGAAAAAA] [+] EMBL BQ906248 [ CCGTTTCGGCAAAGGTGGTGTGT GCGGCGGAGGTGGTTGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAAC ATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATNTGAGTTCAGTGCTGTGGTACATCCAAAa ] consensusID : consensus_12846#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 821 fasta sequence [TTCGCCCTTCTGACTGGACTGAAGGAGTAGAAACTCCTCCT-TCGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCAC-TGCCAGGGGCTG-TAACCACTCATGCATCAACCA-GGAGATTTGGAGGTTCACAA-TTTCAGACATCTCAAGCT-AGCTGCATC-TCATTTAAAA-GGGAAGTGTCTGCTAAAGCAGTA-TTAAGAA-GCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAATTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTGGTGGCGGCGGAGGTGGTGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF311376 [TTCGCCCTTCTGACTGGACTGAAGGAGTAGAAACTCCTCCT TCGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCAC TGCCAGGGGCTG TAACCACTCATGCATCAACCA GGAGATTTGGAGGTTCACAA TTTCAGACATCTCAAGCT AGCTGCATC TCATTTAAAA GGGAAGTGTCTGCTAAAGCAGTA TTAAGAA GCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGG ] [+] EMBL OSC999 [ cntnccntnCCTNTCGCCGCCGCCTACGACGAGGCTTTTCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGC CCTNCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTNGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCACTTGCCA GGGNTGTTAACCACTCATGCATCAACCAGGGAGATTTTGAGGTTCACAATTTTCAGACATCTCAAGCTAAGCTGCATCTTAATTTAAAAGGGGAAGTGTCTGCTAAAGNAGTATTTAAGAAGGCGTAAGATGCAATTCCACTt ] [+] EMBL C74207 [ CGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCG CCTCAGCAGCAGGATCCACCCTCGCGCCANCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTNAACACTTGTCACGTGCTCACTTGCCAGGGGCTG TNACCACTCATGCATCAACCA GGAGATTTGGAGG TCACAA TTTCAGACATCTCAAGCT AG TGCATC TCATTTAAAA GGAAGTGT TTCTAAA NAGTT TTAAGAA GCGTAAGATG NATG CACTaancc ] [+] EMBL CB000270 [ CAGACATCTCAAGCT AGCTGCATC TCATTTAAAA CGGAAGTGTCTGCTAAAGCAGTA TTAAGAA GCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAATTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTGGTGGCGGCGGAGGTGGTGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CA999141 [ ACATCTCAAGCT AGCTGCATC TCATTTAAAA GGGAAGTGTCTGCTAAAGCAGTA TTAAGAA GCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAATTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTGGTGGCGGCGGAGGTGGTGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12846#0 TCCTTCGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCC 60 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 TCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCC 120 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 CAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGC 180 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 CGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACA 240 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 CTTGTCACGTGCTCACTGCCAGGGGCTGTAACCACTCATGCATCAACCAGGAGATTTGGA 300 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 GGTTCACAATTTCAGACATCTCAAGCTAGCTGCATCTCATTTAAAAGGGAAGTGTCTGCT 360 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 AAAGCAGTATTAAGAGTAAGTTGGAATATATCATAGATTCATATCTACCTCAATCTTCCT 420 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 ATAAACAAAATTAAGTGTTCAATTCCTGCAAACAAATTTACTATTTTCTGTTTGGTTAGC 480 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 TTATTGTGAGTTCATGACAATAAGGCATTTGATCAATAACCAAATTGGCATGTATCACCC 540 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 TCTTTTTATTATATATGATTATATATAGATTCTATAGAAAAATTGAATTAGGAGTTACTG 600 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 TTACTCCCTCCGACTCAAAATATGACAACTTAGGACCAGATTGGACACCCCTGTCCAAAT 660 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 TCGTAGTACTAGGATATGTCCAATTCTGTCCTAGTTGCTATATTTTGGGACTGAGGAGTA 720 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 TGAACTATGAAATATTCATGTTAAAATGGTTTAGTTCAAAATACAGTAGATAAGGATTTT 780 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 ACCATACTTGATTGGTTTATTGGTTATACCCTTCCTAGCTAGTACTAATCGTAGTGCTCA 840 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 ATAGGTGCATATCTCATGGGCCATGGCATGTGCATGCTGCATACATTTAAAGATAAGGTG 900 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 CTTTGAATTGTTAATTAGTAGATAAAACTGCATCAGCTACCACTACAATTTTGATGGTAT 960 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 CAACAAAACATTTCAGTATTTCACCTCTAATATATACCAGCAAGTTGGTCTAAAAATTCG 1020 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 AAATACCTCTTCTGTTACATTTGAAGGCAACGGTGTTAGATAAGGGTGATTTATTGATTT 1080 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 TGTCCTTACGTGAATATTAAATTGTTGCACTACCAAATCTCACATCTCTCCAGCAGCCAG 1140 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 TAGTAGTGGCCGGCGGCATCATTAGTGTCGCTGGAGGTGGGCAACAAGTTAATGGAGCAA 1200 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 AGAGACGTGGGCGGTCAAGGCATCAGAGCGTCTGCAGCCTGGCCGAGACCCCCACCTCTG 1260 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 AGCGGCCTCACCATGGGGGTCAGTGTGAGCAGTGTGGCTGGGCTGAGAGCATTGGCTGTG 1320 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 GATGCATACAACCAGGCTGAGGACTGCACTGCCAGGTGGCCTCAGATGTTGACACAGGTC 1380 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 CTAGGTGGAGCCTAATGAGATCAAGATCATAAGAACATGCTTTTCCTGGTTTCTTGCTTC 1440 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 CCTCTTAGCACGGTAGATTGAGCAGCCAAGCCAAGTAGTGTCACCTCCATGATGAAGACA 1500 consensus_12846#1 ----TTCGCCCTTCTGACTGGACTGAAGGAGTAGAAACTCCTCCTTCGCCGCCGCCTACG 56 ** ** * ** ** * * * * * * ** * * ** consensus_12846#0 GCAAGCAGTGGGTATTGCAGTCATTCTGCGTGGTAAAAAAAAGGGGTCAAAACCGAAATA 1560 consensus_12846#1 ACGAGGCTTTCCTCCT-CTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCG 115 * ** * * * * ** ** * * ** * consensus_12846#0 GGAACAAAGCATGACAGGGGATGTAATGTTCTGATGTTATTTATTGGGATCACTGAAACT 1620 consensus_12846#1 GCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCC--CAGGCCGGCCGA---T 170 * * ** * * * ** * * ** * ** * consensus_12846#0 CTGGTGGTATAGATGCAGTTTTTTCTTAATAGTAGTACTAAAAGA-AGCAATATTATCCC 1679 consensus_12846#1 CCGAT--CCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGT 228 * * * * ** * ** * * * * **** ** *** consensus_12846#0 TG-GTACATGGTCAATCTCAATGATTAATATATGTTCTGAAT-----TATTCATGATGC- 1732 consensus_12846#1 CGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTG 288 * ** **** * * * * * * *** ** ** * * * * * consensus_12846#0 TTTACCTCCAGTTACTGAACTTCAAAACTGATGAA--AGGGAAAATGCTAGCTTGCTTAT 1790 consensus_12846#1 CTCACTGCCAGGGGCTGTAACCACTCATGCATCAACCAGGAGATTTGGAGGTTCACAATT 348 * ** **** *** * * ** ** *** * ** * * * * consensus_12846#0 CTGCATACTTCACTGTCAGATCTTCTCATT--GACTGCTTTTTTGTGCGAACGCTATTGA 1848 consensus_12846#1 TCAGACATCTCAAGCTAGCTGCATCTCATTTAAAAGGGAAGTGTCTGCTAAAGCAGT--A 406 * * *** * * ******* * * * * *** ** ** * * consensus_12846#0 CAACAGAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACT 1908 consensus_12846#1 TTAAGAAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACT 466 * ****************************************************** consensus_12846#0 GCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGG 1968 consensus_12846#1 GCAACCGTCAAACGATCTGACCCCAAAGGAAAAATTCAGGGGCCAAAATTGGATGATGGG 526 ********************************** ************************* consensus_12846#0 AGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTGGTGGCGGCGGAGGTGGTGGA 2028 consensus_12846#1 AGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTGGTGGCGGCGGAGGTGGTGGA 586 ************************************************************ consensus_12846#0 GGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTAC 2088 consensus_12846#1 GGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTAC 646 ************************************************************ consensus_12846#0 CTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAAC 2148 consensus_12846#1 CTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAAC 706 ************************************************************ consensus_12846#0 AATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGT 2208 consensus_12846#1 AATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGT 766 ************************************************************ consensus_12846#0 AAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAAT 2268 consensus_12846#1 AAAACTCTACAAGAATTCCTGCCGTGCAAAAAAA----AAAAAAAAAAAAAAAAAAAAA- 821 **************************** * * * * * *** consensus_12846#0 CATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTG 2328 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 AGTTCAGTGCTGTGGTACATCCAAATGGACCGTATTATTGCAGGTGTTGAAATTGGAATG 2388 consensus_12846#1 ------------------------------------------------------------ consensus_12846#0 CTTTTTGGAATGTTGAATCGCAAATTGACCCTTTAAAAAAAAA 2431 consensus_12846#1 ------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||