cluster # 12865

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Oryza sativa
cluster # 12865 cluster # 12865 Sequences # 11 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12865#0 length = 1703 sequences # 11
consensusID : consensus_12865#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1703
fasta sequence
                              [GCAGTTGACAATCTCGGCGGAAAGCGGCGGCGGCGGCGACGGCGGCGGCTGCGGGTCCGATGGATCTGGTGGAGGCGGAGGCGGAGGAGCAGCCGCCGGACGAGGACGGCGACGAGGAGGGGTACGTCGAGGCGGACCCCGCAGGCCGCTTCATCCGGTATGATGAGATCGTGGGGTCAGGGGCCGTCAAAACGGTCTACAAAGCCTTCGATAAGCTGGAGGGTGTCGAGGTAGCATGGAGCCAATCCCGGAT-CGATGACTCTGTCAT-GGGGTCCTCTAAGAAGA-TGAAGCAACTAAACACAGAGATTCAACTTTTGAAGACACTCAAGCATAAGAACATTGAGAAAATGTTTGCTTCATGGGTTGATGGGGAGAAGAAGACTGTTAACATAATCACAGAGTTGTTCACATCCGGGAGCTTGACACAGTACCGCAGAAAGCACAAGAAAGTGAATATGAAGGCTATGAAACGATGGGCAATACAGATATTAACAGGGCTAGAATATCTGCACAGTC-AG-AAGCCAGCAATTATACACAGGGATTTAAAATGTGACAATATATTCATAAATGGAAATCATGGGAAAGTGAAGATTGGTGATTTTGGTTTGGCAACATTCATGCAGCAACAGAAAAAAAGTATAAAAGGCACCTTAGAATTTATGGCACCAGAGCTGTTAACTGGGCATTACAATGAATTGGTTGATATATATTCATTTGGGATGTGCATGCTTGAAATGGTGACATGCGAATACCCATACAGTGAATGTCAAGGCATGGCCCATATATTCAAAAAGATTGATGAGGGTAAGAAACCAGCTGCGTTCTACAAAATTAAAGATGCAGAAGTAAGATCTTTCATAGAGAACTGTTTAGCTCCAGTAGAGAACAGAATGTCTGCAACAGAGCTGTTGAAAAGCTCTTTCCTCCAGGATGATGATCTTATCTCAGTCTCTCTGGTCAAGAATATGTCTGAAGATGGGCAGCAGCCTGTCAGTTGCATGCTTCGTAAGGGCGAGTTTCTGCTGACAGGAAATGTTGATGTAGCCAGCCATGTTGATTT-ATGGCTAAGATTT--CCTGATCCCAGCGGTTGTTTCAAGAGTGTTGAATT-CCCATT-CAATTTGACTGAAGATACAAGTCTTTCTGTGGCTGTGGAAATGGTTGAGCAATTTGGACTGACACAAGACAGCAGACCGATCATCGCGCAGTTGATCGATGCATTCTTGGTCATCCTGATTCCTGAATGGACACCGTGTGTCGCCATCCGTCAGGTGGTTTCTGAGGGTGCAAACGGCTTGACAATTGAGAAGCGCTGACCGAGAGTGATTCTGCTTCCCCAACCGCTGCTACTAACTAATAGTCATAGTTGGCTTCGCTGGTTATGTATCCTTATAGTATTTTCTTTTAGATGGAGTGGACCTTATGCTTTAGCCACCTGTGGGCACTCATATTACAATGCCCTCGAGATGTGCTGCTGAGCATGGAGTTCCTCCGGTGGTGATGATGATGAAAGTTAGGTCTAGTTCAGATAATTTATTTGCTAGGAAGGAGCAGCAAAAATGAGAGTAATCAGTCGGAAATGTTGGGTTTTTTTTCATCTTTAATGCAATTGCTGAATTAGTTGTGGCACGTCTGAATTCATAATCAGATTGGCTGTGCACTTTGCATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK073772             [GCAGTTGACAATCTCGGCGGAAAGCGGCGGCGGCGGCGATGGCGGCGGCTGCGGGTCCGATGGATCTGGTGGAGGCGGAGGCGGAGGAGCAGCCGCCGGACGAGGACGGCGACGAGGAGGGGTACGTCGAGGCGGACCCCGCAGGCCGCTTCATCCGGTATGATGAGATCGTGGGGTCAGGGGCCGTCAAAACGGTCTACAAAGCCTTCGATAAGCTGGAGGGTGTCGAGGTAGCATGGAGCCAATCCCGGAT CGATGACTCTGTCAT GGGGTCCTCTAAGAAGA TGAAGCAACTAAACACAGAGATTCAACTTTTGAAGACACTCAAGCATAAGAACATTGAGAAAATGTTTGCTTCATGGGTTGATGGGGAGAAGAAGACTGTTAACATAATCACAGAGTTGTTCACATCCGGGAGCTTGACACAGTACCGCAGAAAGCACAAGAAAGTGAATATGAAGGCTATGAAACGATGGGCAATACAGATATTAACAGGGCTAGAATATCTGCACAGTC AG AAGCCAGCAATTATACACAGGGATTTAAAATGTGACAATATATTCATAAATGGAAATCATGGGAAAGTGAAGATTGGTGATTTTGGTTTGGCAACATTCATGCAGCAACAGAAAAAAAGTATAAAAGGCACCTTAGAATTTATGGCACCAGAGCTGTTAACTGGGCATTACAATGAATTGGTTGATATATATTCATTTGGGATGTGCATGCTTGAAATGGTGACATGCGAATACCCATACAGTGAATGTCAAGGCATGGCCCATATATTCAAAAAGATTGATGAGGGTAAGAAACCAGCTGCGTTCTACAAAATTAAAGATGCAGAAGTAAGATCTTTCATAGAGAACTGTTTAGCTCCAGTAGAGAACAGAATGTCTGCAACAGAGCTGTTGAAAAGCTCTTTCCTCCAGGATGATGATCTTATCTCAGTCTCTCTGGTCAAGAATATGTCTGAAGATGGGCAGCAGCCTGTCAGTTGCATGCTTCGTAAGGGCGAGTTTCTGCTGACAGGAAATGTTGATGTAGCCAGCCATGTTGATTT ATGGCTAAGATTT  CCTGATCCCAGCGGTTGTTTCAAGAGTGTTGAATT CCCATT CAATTTGACTGAAGATACAAGTCTTTCTGTGGCTGTGGAAATGGTTGAGCAATTTGGACTGACACAAGACAGCAGACCGATCATCGCGCAGTTGATCGATGCATTCTTGGTCATCCTGATTCCTGAATGGACACCGTGTGTCGCCATCCGTCAGGTGGTTTCTGAGGGTGCAAACGGCTTGACAATTGAGAAGCGCTGACCGAGAGTGATTCTGCTTCCCCAACCGCTGCTACTAACTAATAGTCATAGTTGGCTTCGCTGGTTATGTATCCTTATAGTATTTTCTTTTAGATGGAGTGGACCTTATGCTTTAGCCACCTGTGGGCACTCATATTACAATGCCCTCGAGATGTGCTGCTGAGCATGGAGTTCCTCCGGTGGTGATGATGATGAAAGTTAGGTCTAGTTCAGATAATTTATTTGCTAGGAAGGAGCAGCAAAAATGAGAGTAATCAGTCGGAAATGTTGGGTTTTTTTTCATCTTTAATGCAATTGCTGAAT                                                                                        ]
[+] EMBL AK062812             [GCAGTTGACAATCTCGGCGGAAAGCGGCGGCGGCGGCGACGGCGGCGGCTGCGGGTCCGATGGATCTGGTGGAGGCGGAGGCGGAGGAGCAGCCGCCGGACGAGGACGGCGACGAGGAGGGGTACGTCGAGGCGGACCCCGCAGGCCGCTTCATCCGGTATGATGAGATCGTGGGGTCAGGGGCCGTCAAAACGGTCTACAAAGCCTTCGATAAGCTGGAGGGTGTCGAGGTAGCATGGAGCCAATCCCGGAT CGATGACTCTGTCAT GGGGTCCTCTAAGAAGA TGAAGCAACTAAACACAGAGATTCAACTTTTGAAGACACTCAAGCATAAGAACATTGAGAAAATGTTTGCTTCATGGGTTGATGGGGAGAAGAAGACTGTTAACATAATCACAGAGTTGTTCACATCCGGGAGCTTGACACAGTACCGCAGAAAGCACAAGAAAGTGAATATGAAGGCTATGAAACGATGGGCAATACAGATATTAACAGGGCTAGAATATCTGCACAGTC AG AAGCCAGCAATTATACACAGGGATTTAAAATGTGACAATATATTCATAAATGGAAATCATGGGAAAGTGAAGATTGGTGATTTTGGTTTGGCAACATTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU069070             [            CTCGGCGGAAAGCGGCGGCGGCGGCGACGGNGGCGGCTGCGGGTCCGATGGATCTGGTGGAGGCGGAGGCGGAGGAGCAGCCGCCGGACGAGGACNGCGACGAGGAGGGGTACGTCGAGGCGGACCCCGCAGGCCGCTTCATCCGGTATGATGAGATCGTNGGGTCAGGGGCCGTCAAAACGGTCTACAAAGCCTTCGATAAGCTGGAGGGTGTCGAGGTAGCATGGAGCCAATCCCGGAT CGATGACTCTGTCAT NGGGTCCTCTAAGAAGA TGAAGCAACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSS10347A            [                          GCGGCGGCGGCGACGGCGGCGGCTGCGGGTCCGATGGATCTGGTGGAGGCGGAGGCGGAGGAGCAGCCGCCGGACGAGGACGGCGACGAGGAGGGGTACGTCGAGGCGGACCCCGCAGGCCGCTTCATCCGGTATGATGAGATCGTGGGGTCAGGGGCCGTCAAAACGGTCTACAAAGCCTTCGATAAGCTGGAGGGTGTCGAGGTAGCATGGAGCCAATCCCGGATCCGATGACTCTGTCATNGGGGTCCTCTAAGAAGATTGAAGCAACTAAACACAGAGATTCAACTTTTGAAGACACTCAAGCATAAGGACATTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C72227               [                                                                                                                                                                                                        AAAGCCTTCGATAAGCTGGAGGGTGTCGAGGTAGCATGGAGCCAATCCCGGAT CGATGACTCTGTCAT GGGGTCCTCTAAGAAGA TGAAGCAACTAAACACAGAGATTCAACTTTTGAAGACACTCAAGCATAAGAACATTGAGAAAATGTTTGCTTCATGGGTTGATGGGGAGAAGAAGACTGTTAACATAATCACAGAGTTGTTCACATCCGGGAGCTTGACACAGTACCGCAGAAAGCACAAGAAAGTGAATATGAAGGCTATGAAACGATGGGCAATACAGATATTAACA GGCTAGAATATCTGCACAGTC AG AAGCCAGCAATTATACACAGGG TTTAAAATGTGNCAATATATTCATAAATGG AATCATGGGGAAGTG AGGTTTGTGATTTT GTTTTGC ACATTCATGCAGCAccg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF304559             [                                                                                                                                                                                                          AGCCTTCGATAAGCTGGAGGGTGTCGAGGTAGCATGGAGCCAATCCCGGAT CGATGACTCTGTCAT GGGGTCCTCTAAGAAGA TGAAGCAACTAAACACAGAGATTCAACTTTTGAAGACACTCAAGCATAAGAACATTGAGAAAATGTTTGCTTCATGGGTTGATGGGGAGAAGAAGACTGTTAACATAATCACAGAGTTGTTCACATCCGGGAGCTTGACACAGTACCGCAGAAAGCACAAGAAAGTGAATATGAAGGCTATGAAACGATGGGCAATACAGATATTAACAGGGCTAGAATATCTGCACAGTC AG AAGCCAGCAATTATACACAGGGATTTAAAATGTGACAATATATTCATAAATGGAAATCATGGGAAAGTGAAGATTGGTGATTTTGGTTTGGCAACATTCATGCAGCAACAGAAAAAAAGTATAAAAGGCACCTTAGAATTTATGGCACCAGAGCTGTTAACTGGGCATTACAATGAATTGGTTGATATATATTCATTTGGGATGTGCATGCTTGAAATGGTGACATGCGAATACCCATACAGTGAATGTCAAGGCATGGCCCATATATTCAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA752639             [                                                                                                                                                                                                                                                                                                                   GATTCAACTTTTGAAGACACTCAAGCATAAGAACATTGAGAAAATGTTTGCTTCATGGGTTGATGAGGAGAAGAAGACTGTTAACATAATCACAGAGTTGTTCACATCCGGGAGCTTGACACAGTACCGCAGAAAGCACAAGAAAGTGAATATGAAGGCTATGAAACGATGGGCAATACAGATATTAACAAGGCTAGAATATCTGCACAGTCAAGAAAGCCAACAATTATACACAGGGATTTAAAATGTGACAATATATTCATAAATGGGAATCATGGGAAAGTGAAGATTGGTGATTTTGGGTTGGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU069071             [                                                                                                                                                                                                                                                                                                                                                                                                CTGTTAACATAATCACAGAGTTGTTCNCATCCGGGGGCTTGACACNNTACCGCAGAATGCACAAGAAAGTGANTATGAAGGCTATGAANCGATGGGCAATACAGATATTAACAGGGCTAGAATATCTGCACAGTC AG AAGCCAGCAATTATACACAGGGATTTAAAATGTGACAATATATTCATAAATGGAAATCATGGGAAAGTGAAGATTGGTGATTTTGGTTTGGCAACATTCATGCAGCAACAGAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU093911             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               tgtTTGATTTNATGGCTAAGATTTTCCCTGATCCNAGCGGTTGTTNCAAGAGTGTTGAATTCCCCATTCCAATTTGACTGAAGATACAAGTCTTTCTGTGNCTGTGGAAATGGTTGAGCAATTTGGACTGACACAAGACAGCAGACCGATCATCGCGCAGTTGATCGATGCATTCTTGGTCATCCTGATTCCTGAATGGACACCGTGTGTCGCCATCCGTCAGGTGGTTTCTGAGGGTGCAAACGGCTTGACAATTGAGAAGCGCTGACCGAGAGTGATTCTGCTTCCCCAACCGCTGCTACTAACTAATAGTCATAGTT GNTTCGCTGGTTATGTATCCTTATAGTATTTTCTTTTAGATGGAGTGGACCTTATGCTTTAGCCACCTGTGGGCACTCATATTACAATGCCCTCGAGATGTGCTGCTGAGCATGGAGTTCCNCCGGTGGTGATGATGATGAAAGTTAGGTCTAGTTCAGATAATTTATTTGCTAGGAAGGAGCAGCAAAAATGAGAGTAATCAGTCGGAAATGTTGGGTTTTTTTTCATCTTTAATGCAATTGCTGAATTAGTTGTGGCACGTCTGAATTCATAATCAGATTGGCTGTGCACTTTGCATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB000344             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGAATT CCCATT CAATTTGACTGAAGATACAACTCTTTCTGTGGCTGTGGAAATGGTTGAGCAATTTGGACTGACACAAGACAGCAGACCGATCATCGCGCAGTTGATCGATGCATTCTTGGTCATCCTGATTCCTGAATGGACACCGTGTGTCGCCATCCGTCAGGTGGTTTCTGAGGGTGCAAACGGCTTGACAATTGAGAAGCGCTGACCGAGAGTGATTCTGCTTCCCCAACCGCTGCTACTAACTAATAGTCATAGTTGGCTTCGCTGGTTATGTATCCTTATAGTATTTTCTTTTAGATGGAGTGGACCTTATGCTTTAGCCACCTGTGGGCACTCATATTACAATGCCCTCGAGATGTGCTGCTGAGCATGGAGTTCCTCCGGTGGTGATGATGATGAAAGTTAGGTCTAGTTCAGATAATTTATTTGCTAGGAAGGAGCAGCAAAAATGAGAGTAATCAGTCGGAAATGTTGGGTTTTTTTTCATCTTTAATGCAATTGCTGAATTAGTTGTGGCACGTCTGAATTCATAATCAGATTGGCTGTGCAaaaaaaaaa                                     ]
[+] EMBL CA999206             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATT CCCATT CAATTTGACTGAAGATACAAGTCTTTCTGTGGCTGTGGAAATGGTTGAGCAATTTGGACTGACACAAGACAGCAGACCGATCATCGCGCAGTTGATCGATGCATTCTTGGTCATCCTGATTCCTGAATGGACACCGTGTGTCGCCATCCGTCAGGTGGTTTCTGAGGGTGCAAACGGCTTGACAATTGAGAAGCGCTGACCGAGAGTGATTCTGCTTCCCCAACCGCTGCTACTAACTAATAGTCATAGTTGGCTTCGCTGGTTATGTATCCTTATAGTATTTTCTTTTAGATGGAGTGGACCTTATGCTTTAGCCACCTGTGGGCACTCATATTACAATGCCCTCGAGATGTGCTGCTGAGCATGGAGTTCCTCCGGTGGTGATGATGATGAAAGTTAGGTCTAGTTCAGATAATTTATTTGCTAGGAAGGAGCAGCAAAAATGAGAGTAATCAGTCGGAAATGTTGGGTTTTTTTTCATCTTTAATGGCATTGCTGAATTAGTTGTGGCACGTCTGAATTCATAA                                                              ]




>consensus_12865#0
GCAGTTGACAATCTCGGCGGAAAGCGGCGGCGGCGGCGACGGCGGCGGCTGCGGGTCCGA
TGGATCTGGTGGAGGCGGAGGCGGAGGAGCAGCCGCCGGACGAGGACGGCGACGAGGAGG
GGTACGTCGAGGCGGACCCCGCAGGCCGCTTCATCCGGTATGATGAGATCGTGGGGTCAG
GGGCCGTCAAAACGGTCTACAAAGCCTTCGATAAGCTGGAGGGTGTCGAGGTAGCATGGA
GCCAATCCCGGATCGATGACTCTGTCATGGGGTCCTCTAAGAAGATGAAGCAACTAAACA
CAGAGATTCAACTTTTGAAGACACTCAAGCATAAGAACATTGAGAAAATGTTTGCTTCAT
GGGTTGATGGGGAGAAGAAGACTGTTAACATAATCACAGAGTTGTTCACATCCGGGAGCT
TGACACAGTACCGCAGAAAGCACAAGAAAGTGAATATGAAGGCTATGAAACGATGGGCAA
TACAGATATTAACAGGGCTAGAATATCTGCACAGTCAGAAGCCAGCAATTATACACAGGG
ATTTAAAATGTGACAATATATTCATAAATGGAAATCATGGGAAAGTGAAGATTGGTGATT
TTGGTTTGGCAACATTCATGCAGCAACAGAAAAAAAGTATAAAAGGCACCTTAGAATTTA
TGGCACCAGAGCTGTTAACTGGGCATTACAATGAATTGGTTGATATATATTCATTTGGGA
TGTGCATGCTTGAAATGGTGACATGCGAATACCCATACAGTGAATGTCAAGGCATGGCCC
ATATATTCAAAAAGATTGATGAGGGTAAGAAACCAGCTGCGTTCTACAAAATTAAAGATG
CAGAAGTAAGATCTTTCATAGAGAACTGTTTAGCTCCAGTAGAGAACAGAATGTCTGCAA
CAGAGCTGTTGAAAAGCTCTTTCCTCCAGGATGATGATCTTATCTCAGTCTCTCTGGTCA
AGAATATGTCTGAAGATGGGCAGCAGCCTGTCAGTTGCATGCTTCGTAAGGGCGAGTTTC
TGCTGACAGGAAATGTTGATGTAGCCAGCCATGTTGATTTATGGCTAAGATTTCCTGATC
CCAGCGGTTGTTTCAAGAGTGTTGAATTCCCATTCAATTTGACTGAAGATACAAGTCTTT
CTGTGGCTGTGGAAATGGTTGAGCAATTTGGACTGACACAAGACAGCAGACCGATCATCG
CGCAGTTGATCGATGCATTCTTGGTCATCCTGATTCCTGAATGGACACCGTGTGTCGCCA
TCCGTCAGGTGGTTTCTGAGGGTGCAAACGGCTTGACAATTGAGAAGCGCTGACCGAGAG
TGATTCTGCTTCCCCAACCGCTGCTACTAACTAATAGTCATAGTTGGCTTCGCTGGTTAT
GTATCCTTATAGTATTTTCTTTTAGATGGAGTGGACCTTATGCTTTAGCCACCTGTGGGC
ACTCATATTACAATGCCCTCGAGATGTGCTGCTGAGCATGGAGTTCCTCCGGTGGTGATG
ATGATGAAAGTTAGGTCTAGTTCAGATAATTTATTTGCTAGGAAGGAGCAGCAAAAATGA
GAGTAATCAGTCGGAAATGTTGGGTTTTTTTTCATCTTTAATGCAATTGCTGAATTAGTT
GTGGCACGTCTGAATTCATAATCAGATTGGCTGTGCACTTTGCATTTAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case