These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12867#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1028 fasta sequence [CCAAAGCCGAGGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCGATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGCAATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCCACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTTTCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCTTAATATAATCCCCTTCTGGATG] [+] EMBL AK070662 [CCAAAGCCGAGGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAAGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCGATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGCAATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCCACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTTTCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCTTAATATAATCCCCTTCTGGATG] [+] EMBL AK068769 [ CAAAGCCGAGGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAAGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGG GACGGCCGGATCTCGCGGTCCGAGCTCGGAGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGAGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCGATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGCAATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCCACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTTTCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCTTAATATAA ] [+] EMBL AK104094 [ AAAGCCGAGGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCGATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGCAATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCCACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTTTCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCTTAATATAAT ] [+] EMBL AK104159 [ GGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCGATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGCAATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCCACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTTTCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCT ] [+] EMBL CF653635 [ ACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTTAAAGACCAC ] [+] EMBL BE230578 [ CGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTTCGCCGGCGAGCTCGCCCGCGT CTTCACGG CTCGGCGAGAAGGGCACCGTC ] [+] EMBL BE230037 [ CGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCA ] [-] EMBL AU071237 [ GAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCTTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCNTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGAC CCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGC ] [+] EMBL AU182574 [ AGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGC ] [+] EMBL AU182114 [ AGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGTCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGNGGACGCCG ] [+] EMBL AU057966 [ CGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||