cluster # 12883

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12883 cluster # 12883 Sequences # 11 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12883#0 length = 1946 sequences # 5
consensus_12883#1 length = 643 sequences # 1
consensus_12883#2 length = 606 sequences # 1

consensus_12883#3 length = 591 sequences # 1
consensus_12883#4 length = 488 sequences # 2
consensus_12883#5 length = 160 sequences # 1

consensusID : consensus_12883#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1946
fasta sequence

                              [CCTTTGCGCCGCCCGCGTCCGACGCGCGGCGGCGGCGGAGATGTTGCGGCGGATGCGATGGATGGCGGACGGGGACGGGCGGTGGGAGCTGGACGTGGAGACGCCGGCGACGATGGAGGGCGCGGCGCGCCCCGTCCCCGGCGACCCGCTGCCGCTCGGCCTCTCGCGGGGGCCCCGGGTCACCCGCACGAAGCAGCTCGACTTCCTCCACCGCTTCATGGCCTCGCCGCTCGTCCCCTCCTTCTCCGCCTCCGGCGCCGGCCTCTCCGTCCACCACGCCCACCTCGTCCACCTCGCCCACAACTTGTCTTTTACTATCTTGGAGCAACTTCATGTACAGAAGCTTGTAGCTGTTGTGAAAGAGAAGTTATCAAATCGGCAAGAGGTCTCCTGGTCCAATGATATCAAAAGGCACCTGCATGATGTTATGTCTCTAGGTGTTGGCACAGAACTCTTGATTACACCAGATACCACTTTGCTACTGGAGCTGTACAATCTGAAGAAGGGGGATCGGGGCAAAGCAATATTTCGACACAAG-CTTCCTCATCAAAATATTACATTAGAAGCATCTTGGCCTGGATTATTCATTGATAAAAACGGGGTTTACTGGGATGTGCCATTGTCATTATCAGCTGACCTGGCTTCAGTTGGCTCCGAGTCTGGATTGAGTTATCATGTACTATTGCAGCAGAATAGTGGAGAACCAAAATGTTTTGGTGGTGGTGAAGAAACCAGTGATGTTCCTGTTGCTCTGTTACCAGGGTTATGTGCTAAGGCAGCTGTTTCGATTAAGAAAAGCATTGATGTTTGGAGGAAAAAAGAAGATAAGCTAAAAAATGTCCAGCCGTATGATGTATTTCTCTCAGAACCTCATGTTTCGTTCACCGGGATCATTGGTGCAGTAGCCAGTGGTTCTTTTGGGGATTGCTCAAAAAGAATGTCCATGCAAAATGAAATACTAAAATCCAATGCCTTTAAATATTTTGATGAGAGGAACAAGTTTGCTGCCTTTGCAGACCTCTTTGCGTCTGTTAATTTTACAGCTCAACACGGGAATTTTCAGAGGCTTCTCCTGGATTTGACAAGGGTAAGCGCCCGGTTAGATATATCCTCAGGATCATTGTTCTTACGTGGTGCTTCTCAGCTTGCACAAGATTTCTTCTTCTCTCGACGCCCTGATTTAGAGACATTCTGTGATGTTTGTCCTGATGTGATTGTTTCTCTTCAACAACAGATAGTTGGACCCTTCAGCTTTCGTGTTGAATCCACAGTTACCATTGACCCTAAAAAACAAGACCATTTCGTTCGTGTGGACGACTCAGTTTTTGCAATCGACTGGGCTCTGAAGGTCCTGGGTTCCGCAAAGGCCACTGCTTGGTATTCTCCTAAGCATCAGGAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTGGCTCATCGTATCACATAAACATGATTTTCAAAGGCTTTCTTTCTCGTATTGGTGCCAATGAGAACTAGGTCAGGTGACTGTAGATGTTACGCAGTGTGCTTCATCAAGGCAGTTTGTAGATGTGATCAAGTTTATCTCGGTGTCTTGCATTCACCTGTTGAAGACTGTTATTCTTGTAGGCTGTAGTTCTGTTCATTGGTTAAAACAGCTTGCTGTTTAACAGGCAATGAGCCTTGACGGAGGGCAGTTCTTAGATTGTTTCGGTTCTGTAGAATAGTGTAGTTATGCAATAAGTCAATACGTGTCGACGACAATATATTTCTAGTTGTGTTTCATACTTGCTTTGGGCATCAGAAGAATACTTGCTGATGTAAGTGATCGTCATCTGAATGCCGTCTGTTATATATTCATCCACTGATTGCTCGGTCAGGCCTGAAGAGTAGTTGATCTATCTTACAAGTTGAATTGTTGATGCGAATCACATCTGATAAATGAAATCTTCTCAG]

[+] EMBL AK100105             [CCTTTGCGCCGCCCGCGTCCGACGCGCGGCGGCGGCGGAGATGTTGCGGCGGATGCGATGGATGGCGGACGGGGACGGGCGGTGGGAGCTGGACGTGGAGACGCCGGCGACGATGGAGGGCGCGGCGCGCCCCGTCCCCGGCGACCCGCTGCCGCTCGGCCTCTCGCGGGGGCCCCGGGTCACCCGCACGAAGCAGCTCGACTTCCTCCACCGCTTCATGGCCTCGCCGCTCGTCCCCTCCTTCTCCGCCTCCGGCGCCGGCCTCTCCGTCCACCACGCCCACCTCGTCCACCTCGCCCACAACTTGTCTTTTACTATCTTGGAGCAACTTCATGTACAGAAGCTTGTAGCTGTTGTGAAAGAGAAGTTATCAAATCGGCAAGAGGTCTCCTGGTCCAATGATATCAAAAGGCACCTGCATGATGTTATGTCTCTAGGTGTTGGCACAGAACTCTTGATTACACCAGATACCACTTTGCTACTGGAGCTGTACAATCTGAAGAAGGGGGATCGGGGCAAAGCAATATTTCGACACAAG CTTCCTCATCAAAATATTACATTAGAAGCATCTTGGCCTGGATTATTCATTGATAAAAACGGGGTTTACTGGGATGTGCCATTGTCATTATCAGCTGACCTGGCTTCAGTTGGCTCCGAGTCTGGATTGAGTTATCATGTACTATTGCAGCAGAATAGTGGAGAACCAAAATGTTTTGGTGGTGGTGAAGAAACCAGTGATGTTCCTGTTGCTCTGTTACCAGGGTTATGTGCTAAGGCAGCTGTTTCGATTAAGAAAAGCATTGATGTTTGGAGGAAAAAAGAAGATAAGCTAAAAAATGTCCAGCCGTATGATGTATTTCTCTCAGAACCTCATGTTTCGTTCACCGGGATCATTGGTGCAGTAGCCAGTGGTTCTTTTGGGGATTGCTCAAAAAGAATGTCCATGCAAAATGAAATACTAAAATCCAATGCCTTTAAATATTTTGATGAGAGGAACAAGTTTGCTGCCTTTGCAGACCTCTTTGCGTCTGTTAATTTTACAGCTCAACACGGGAATTTTCAGAGGCTTCTCCTGGATTTGACAAGGGTAAGCGCCCGGTTAGATATATCCTCAGGATCATTGTTCTTACGTGGTGCTTCTCAGCTTGCACAAGATTTCTTCTTCTCTCGACGCCCTGATTTAGAGACATTCTGTGATGTTTGTCCTGATGTGATTGTTTCTCTTCAACAACAGATAGTTGGACCCTTCAGCTTTCGTGTTGAATCCACAGTTACCATTGACCCTAAAAAACAAGACCATTTCGTTCGTGTGGACGACTCAGTTTTTGCAATCGACTGGGCTCTGAAGGTCCTGGGTTCCGCAAAGGCCACTGCTTGGTATTCTCCTAAGCATCAGGAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTGGCTCATCGTATCACATAAACATGATTTTCAAAGGCTTTCTTTCTCGTATTGGTGCCAATGAGAACTAGGTCAGGTGACTGTAGATGTTACGCAGTGTGCTTCATCAAGGCAGTTTGTAGATGTGATCAAGTTTATCTCGGTGTCTTGCATTCACCTGTTGAAGACTGTTATTCTTGTAGGCTGTAGTTCTGTTCATTGGTTAAAACAGCTTGCTGTTTAACAGGCAATGAGCCTTGACGGAGGGCAGTTCTTAGATTGTTTCGGTTCTGTAGAATAGTGTAGTTATGCAATAAGTCAATACGTGTCGACGACAATATATTTCTAGTTGTGTTTCATACTTGCTTTGGGCATCAGAAGAATACTTGCTGATGTAAGTGATCGTCATCTGAATGCCGTCTGTTATATATTCATCCACTGATTGCTCGGTCAGGCCTGAAGAGTAGTTGATCTATCTTACAAGTTGAATTGTTGATGCGAATCACATCTGATAAATGAAATCTTCTCAG]
[+] EMBL CF312139             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGCCTTCCTCATCAAAATATTACATTAGAAGCATCTTGGCCTGGATTATTCATTGATAAAAACGGGGTTTACTGGGATGTGCCATTGTCATTATCAGCTGACCTGGCTTCAGTTGGCTCCGAGTCTGGATTGAGTTATCATGTACTATTGCAGCAGAATAGTGGAGAACCAAAATGTTTTGGTGGTGGTGAAGAAACCAGTGATGTTCCTGTTGCTCTGTTACCAGGGTTATGTGCTAAGGCAGCTGTTTCGATTAAGAAAAGCATTGATGTTTGGAGGAAAAAAGAAGATAAGCTAAAAAATGTCCAGCCGTATGATGTATTTCTCTCAGAACCTCATGTTTCGTTCACCGGGATCATTGGTGCAGTAGCCAGTGGTTCTTTTGGGGATTGCTCAAAAAGAATGTCCATGCAAAATGAAATACTAAAATCCAATGCCTTTAAATATTTTGATGAGAGGAACAAGTTTGCTGCCTTTGCAGACCTCTTTGCGTCTGTTAATTTTACAGCTCAACACGGGAATTTTCAGAGGCTTCTCCTGGATTTGACAAGGGTAAGCGCCCGGTTAGATATATCCTCAGGATCATTGTTCTTACGTGGTGCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA763779             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTCTGGATTGAGTTATCATGTACTATTGCAGCAGAATAGTGGAGAACCAAAATGTTTTGGTGGTGGTGAAGAAACCAGTGATGTTCCTGTTGCTCTGTTACCAGGGTTATGTGCTAAGGCAGCTGTTTCGATTAAGAAAAGCATTGATGTTTGGAGGAAAAAAGAAGATAAGCTAAAAAATGTCCAGCCGTATGATGTATTTCTCTCAGAACCTCATGTTTCGTTCACCGGGATCATTGGTGCAGTAGCCAGTGGTTCTTTTGGGGATTGCTCAAAAAGAATGTCCATGCAAAATGAAATACTAAAATCCAATGCCTTTAAATATTTTGATGAGAGGAACAAGTTTGCTGCCTTTGCAGACCTCTTTGCGTCTGTTAATTTTACAGCTCAACACGGGAATTTTCAGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB624398             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGGCTTCTCCTGGATTTGACAAGGGTAAGCGCCCGGTTAGATATATCCTCAGGATCATTGTTCTTACGTGGTGCTTCTCAGCTTGCACAAGATTTCTTCTTCTCTCGACGCCCTGATTTAGAGACATTCTGTGATGTTTGTCCTGATGTGATTGTTTCTCTTCAACAACAGATAGTTGGACCCTTCAGCTTTCGTGTTGAATCCACAGTTACCATTGACCCTAAAAAACAAGACCATTTCGTTCGTGTGGACGACTCAGTTTTTGCAATCGACTGGGCTCTGAAGGTCCTGGGTTCCGCAAAGGCCACTGCTTGGTATTCTCCTAAGCATCAGGAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTGGCTCATCGTATCACATAAACATGATTTTCAAAGGCTTTCTTTCTCGTATTGGTGCCAATGAGAACTAGGTCAGGTGACTGTAGATGTTACGCAGTGTGCTTCATCAAGGCAGTTTGTAGATGTGATCAAGTTTATCTCGGTGTCTTGCATTCACCTGTTGAAGACTGTTATTCTTGTAGGCTGTAGTTCTGTTCATTGGTTAAAACAGCTTGCTGTTTAACAGGCAATGAGCCTTGACGGAGGGCAGTTCTTAGATTGTTTCGGTTCTGTAGAATAGTGTAGTTATGCAATAAGTCAATACGTGTCGACGACAATATATTTCTAGTTGTGTTTCATACTTGCTTTGGGCATCAGAAGAATACTTGCTGATGTAAGTGATGGTCATCTGAATGCCGTCTGTTATATATTCATC                                                                                              ]
[-] EMBL CB624397             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AACAGATAGTTGGACCCTTCAGCTTTCGTGTTGAATCCACAGTTACCATTGACCCTAAAAAACAAGACCATTTCGTTCGTGTGGACGACTCAGTTTTTGCAATAGACTGGGTTCTGAAGGTCTTGGGTTCCGCAAAGGACACTGTTTGGTATTTTCTTAAGCATCAGGAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTGGCTAATCGTATCACATAAACATGATTTTCAAAGGCTTTCTTTCTCGTATTGGTGCCAATGAGAACTAGGTCAGGTGACTGTAGATGTTACGCAGTGTGCTTCATCAAGGCAGTTTGTAGATGTGATCAAGTTTATTTCGGTGTTTTGCATTCACCTGTTGAAGACTGTTATTTTTGTAGGCTGTAGTTCTGTTCATTGGTTAAAACAGCTTGCTGTTTAACAGGCAATGAGCCTTGACGGAGGGAAGTTTTTAGATTGTTTGGGTTCTGTAGAATAGTGTAGTTATGCAATAAGT                                                                                                                                                                                                                   ]




>consensus_12883#0
CCTTTGCGCCGCCCGCGTCCGACGCGCGGCGGCGGCGGAGATGTTGCGGCGGATGCGATG
GATGGCGGACGGGGACGGGCGGTGGGAGCTGGACGTGGAGACGCCGGCGACGATGGAGGG
CGCGGCGCGCCCCGTCCCCGGCGACCCGCTGCCGCTCGGCCTCTCGCGGGGGCCCCGGGT
CACCCGCACGAAGCAGCTCGACTTCCTCCACCGCTTCATGGCCTCGCCGCTCGTCCCCTC
CTTCTCCGCCTCCGGCGCCGGCCTCTCCGTCCACCACGCCCACCTCGTCCACCTCGCCCA
CAACTTGTCTTTTACTATCTTGGAGCAACTTCATGTACAGAAGCTTGTAGCTGTTGTGAA
AGAGAAGTTATCAAATCGGCAAGAGGTCTCCTGGTCCAATGATATCAAAAGGCACCTGCA
TGATGTTATGTCTCTAGGTGTTGGCACAGAACTCTTGATTACACCAGATACCACTTTGCT
ACTGGAGCTGTACAATCTGAAGAAGGGGGATCGGGGCAAAGCAATATTTCGACACAAGCT
TCCTCATCAAAATATTACATTAGAAGCATCTTGGCCTGGATTATTCATTGATAAAAACGG
GGTTTACTGGGATGTGCCATTGTCATTATCAGCTGACCTGGCTTCAGTTGGCTCCGAGTC
TGGATTGAGTTATCATGTACTATTGCAGCAGAATAGTGGAGAACCAAAATGTTTTGGTGG
TGGTGAAGAAACCAGTGATGTTCCTGTTGCTCTGTTACCAGGGTTATGTGCTAAGGCAGC
TGTTTCGATTAAGAAAAGCATTGATGTTTGGAGGAAAAAAGAAGATAAGCTAAAAAATGT
CCAGCCGTATGATGTATTTCTCTCAGAACCTCATGTTTCGTTCACCGGGATCATTGGTGC
AGTAGCCAGTGGTTCTTTTGGGGATTGCTCAAAAAGAATGTCCATGCAAAATGAAATACT
AAAATCCAATGCCTTTAAATATTTTGATGAGAGGAACAAGTTTGCTGCCTTTGCAGACCT
CTTTGCGTCTGTTAATTTTACAGCTCAACACGGGAATTTTCAGAGGCTTCTCCTGGATTT
GACAAGGGTAAGCGCCCGGTTAGATATATCCTCAGGATCATTGTTCTTACGTGGTGCTTC
TCAGCTTGCACAAGATTTCTTCTTCTCTCGACGCCCTGATTTAGAGACATTCTGTGATGT
TTGTCCTGATGTGATTGTTTCTCTTCAACAACAGATAGTTGGACCCTTCAGCTTTCGTGT
TGAATCCACAGTTACCATTGACCCTAAAAAACAAGACCATTTCGTTCGTGTGGACGACTC
AGTTTTTGCAATCGACTGGGCTCTGAAGGTCCTGGGTTCCGCAAAGGCCACTGCTTGGTA
TTCTCCTAAGCATCAGGAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTG
GCTCATCGTATCACATAAACATGATTTTCAAAGGCTTTCTTTCTCGTATTGGTGCCAATG
AGAACTAGGTCAGGTGACTGTAGATGTTACGCAGTGTGCTTCATCAAGGCAGTTTGTAGA
TGTGATCAAGTTTATCTCGGTGTCTTGCATTCACCTGTTGAAGACTGTTATTCTTGTAGG
CTGTAGTTCTGTTCATTGGTTAAAACAGCTTGCTGTTTAACAGGCAATGAGCCTTGACGG
AGGGCAGTTCTTAGATTGTTTCGGTTCTGTAGAATAGTGTAGTTATGCAATAAGTCAATA
CGTGTCGACGACAATATATTTCTAGTTGTGTTTCATACTTGCTTTGGGCATCAGAAGAAT
ACTTGCTGATGTAAGTGATCGTCATCTGAATGCCGTCTGTTATATATTCATCCACTGATT
GCTCGGTCAGGCCTGAAGAGTAGTTGATCTATCTTACAAGTTGAATTGTTGATGCGAATC
ACATCTGATAAATGAAATCTTCTCAG

consensusID : consensus_12883#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 643
fasta sequence

                              [ATNCGGCACGNGCGGTCACCAGCTTCCTTTGCGCCGCCCGCGTCCGACACGCGGCGGCGGCGGAAGATGTTGCGGCGGNTGCCANNGATGGCGGACGGGGACCGGCGGTGGGAGCTGGACCTGGAAACACCNGCGNCNNTAGAAGGCGCGGCGCGCCCCGTCNCCGGCGNCCCGCTGCCGCTCGGCCTCTNGCGGGGGCCCGGGTCACCCGCACGNANCNNCTCGNCTTCCTCCNCCGCTTCATGGCCTCGCCGCACGTCCNCNCCTACNCCGCCNCCGGCGCCGGCCTCTCCGTCCACCACGCCCNCCTCGTCCNCNTNGCCCNCGNCTTGTCTTNNNCNNTCTTGGNGCANCTTCNTGTACNCNNGCTNGTTGCTGTTGTGNNAGNCNGGTTATCCCNTCTGCNNNNGGTCTCCTGNTCCNNTGATATCCAAAGGGTACCTGCCTTANTGTTATGTCTCTNNGTGTTGGCNCCGNGAGCNNTTGNTNNCCCCCANTACCNCTNNNGCNGNTGGGNGCTGTNCAATCTNANAAAAGGGGGAATCNGGGCAAAGTCCATATTTNNACCNNGCTTNCCCNTCTNNAANATNCCNTNNGNNAGCTCTTGGCCNTGGATTATTNTTNGNAAAAGNNCCGGGTTANC]

[+] EMBL BE229626             [ATNCGGCACGNGCGGTCACCAGCTTCCTTTGCGCCGCCCGCGTCCGACACGCGGCGGCGGCGGAAGATGTTGCGGCGGNTGCCANNGATGGCGGACGGGGACCGGCGGTGGGAGCTGGACCTGGAAACACCNGCGNCNNTAGAAGGCGCGGCGCGCCCCGTCNCCGGCGNCCCGCTGCCGCTCGGCCTCTNGCGGGGGCCCGGGTCACCCGCACGNANCNNCTCGNCTTCCTCCNCCGCTTCATGGCCTCGCCGCACGTCCNCNCCTACNCCGCCNCCGGCGCCGGCCTCTCCGTCCACCACGCCCNCCTCGTCCNCNTNGCCCNCGNCTTGTCTTNNNCNNTCTTGGNGCANCTTCNTGTACNCNNGCTNGTTGCTGTTGTGNNAGNCNGGTTATCCCNTCTGCNNNNGGTCTCCTGNTCCNNTGATATCCAAAGGGTACCTGCCTTANTGTTATGTCTCTNNGTGTTGGCNCCGNGAGCNNTTGNTNNCCCCCANTACCNCTNNNGCNGNTGGGNGCTGTNCAATCTNANAAAAGGGGGAATCNGGGCAAAGTCCATATTTNNACCNNGCTTNCCCNTCTNNAANATNCCNTNNGNNAGCTCTTGGCCNTGGATTATTNTTNGNAAAAGNNCCGGGTTANC]




>consensus_12883#1
ATNCGGCACGNGCGGTCACCAGCTTCCTTTGCGCCGCCCGCGTCCGACACGCGGCGGCGG
CGGAAGATGTTGCGGCGGNTGCCANNGATGGCGGACGGGGACCGGCGGTGGGAGCTGGAC
CTGGAAACACCNGCGNCNNTAGAAGGCGCGGCGCGCCCCGTCNCCGGCGNCCCGCTGCCG
CTCGGCCTCTNGCGGGGGCCCGGGTCACCCGCACGNANCNNCTCGNCTTCCTCCNCCGCT
TCATGGCCTCGCCGCACGTCCNCNCCTACNCCGCCNCCGGCGCCGGCCTCTCCGTCCACC
ACGCCCNCCTCGTCCNCNTNGCCCNCGNCTTGTCTTNNNCNNTCTTGGNGCANCTTCNTG
TACNCNNGCTNGTTGCTGTTGTGNNAGNCNGGTTATCCCNTCTGCNNNNGGTCTCCTGNT
CCNNTGATATCCAAAGGGTACCTGCCTTANTGTTATGTCTCTNNGTGTTGGCNCCGNGAG
CNNTTGNTNNCCCCCANTACCNCTNNNGCNGNTGGGNGCTGTNCAATCTNANAAAAGGGG
GAATCNGGGCAAAGTCCATATTTNNACCNNGCTTNCCCNTCTNNAANATNCCNTNNGNNA
GCTCTTGGCCNTGGATTATTNTTNGNAAAAGNNCCGGGTTANC

consensusID : consensus_12883#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 606
fasta sequence

                              [TTAGAGACATTCTGTGATGTTCGTCCTGATGTGATTGTTTCTCTTCAACAACAGATAGTTGGACCCTTCAGCTTTCGTGTTGAATCCACAGTTACCATTGACCCTAAAAAACAAGACCATTTCGTTCGTGTGGACGACTCAGTTTTTGCAATCGACTGGGCTCTGAAGGTCATGGGTTCCGCAAAGGCCACTGCTTGGTATTCTCCTAAGCATCAGGAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTGGCTCATCGTATCACATAAACATGATTTTCAAAGGCTTTCTTTCTCGATATTGGTGCCAACGAGAACTAGGTCAGGTGACTGTAGATGCTACGCAGTGTGCTTCATCAAGGCAGTTCGTAGAGGTGATCAAGTTTATCTCGGTGTCTTGCATTCACCCGCCGAAGACTGTTATTTTGGCAGGCTGTAGTTGTGGTCAGTGGTTAAAGCAGCCTGTTGTTTAACAGGCAATGAGCCTTGAAGATCCCACCGCCCGTCCCCGTCCGCCATCCATCGCATCCGCCGCAACATCTCCGCCGCCGCCGCGCGTCGGACGCGGGCGGCGCAAAGGAAGCTGGTGACCGAGGCG]

[-] EMBL CB652940             [TTAGAGACATTCTGTGATGTTCGTCCTGATGTGATTGTTTCTCTTCAACAACAGATAGTTGGACCCTTCAGCTTTCGTGTTGAATCCACAGTTACCATTGACCCTAAAAAACAAGACCATTTCGTTCGTGTGGACGACTCAGTTTTTGCAATCGACTGGGCTCTGAAGGTCATGGGTTCCGCAAAGGCCACTGCTTGGTATTCTCCTAAGCATCAGGAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTGGCTCATCGTATCACATAAACATGATTTTCAAAGGCTTTCTTTCTCGATATTGGTGCCAACGAGAACTAGGTCAGGTGACTGTAGATGCTACGCAGTGTGCTTCATCAAGGCAGTTCGTAGAGGTGATCAAGTTTATCTCGGTGTCTTGCATTCACCCGCCGAAGACTGTTATTTTGGCAGGCTGTAGTTGTGGTCAGTGGTTAAAGCAGCCTGTTGTTTAACAGGCAATGAGCCTTGAAGATCCCACCGCCCGTCCCCGTCCGCCATCCATCGCATCCGCCGCAACATCTCCGCCGCCGCCGCGCGTCGGACGCGGGCGGCGCAAAGGAAGCTGGTGACCGAGGCG]




>consensus_12883#2
TTAGAGACATTCTGTGATGTTCGTCCTGATGTGATTGTTTCTCTTCAACAACAGATAGTT
GGACCCTTCAGCTTTCGTGTTGAATCCACAGTTACCATTGACCCTAAAAAACAAGACCAT
TTCGTTCGTGTGGACGACTCAGTTTTTGCAATCGACTGGGCTCTGAAGGTCATGGGTTCC
GCAAAGGCCACTGCTTGGTATTCTCCTAAGCATCAGGAGGCAATGGTGGAGCTTCGGTTC
TTTGAGACCTGAAGAGGTTGGCTCATCGTATCACATAAACATGATTTTCAAAGGCTTTCT
TTCTCGATATTGGTGCCAACGAGAACTAGGTCAGGTGACTGTAGATGCTACGCAGTGTGC
TTCATCAAGGCAGTTCGTAGAGGTGATCAAGTTTATCTCGGTGTCTTGCATTCACCCGCC
GAAGACTGTTATTTTGGCAGGCTGTAGTTGTGGTCAGTGGTTAAAGCAGCCTGTTGTTTA
ACAGGCAATGAGCCTTGAAGATCCCACCGCCCGTCCCCGTCCGCCATCCATCGCATCCGC
CGCAACATCTCCGCCGCCGCCGCGCGTCGGACGCGGGCGGCGCAAAGGAAGCTGGTGACC
GAGGCG

consensusID : consensus_12883#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 591
fasta sequence

                              [CTTCCTTNGCGCCGCCCGCNTCCGNCGCGCGGCGGCGGCGGNGNTGTTGCGGCGGNTGCCNTNGATGGCGGNCNGGGNCTGGCGGTGGGNGCTGGNCNTGGANNCGCCGGCNNCANTNGAAGGCGCGGCNCGCCCNGTCCCNGGCGNCCCGCTGCCGCTCGGCCTNTNGCGGGGGCCCCGGGTCACCCGCACGNAGCAGCTCNNCTTNCTCCNCCGCTTNNTGGCCTNGCCGCTCGTCCCCTNCTNCTCCGCCTCCGGCGCCGGCCTNTNNGTCNNCCACGCCCACCTNGTNCNCNTNGCCCGCNGCTTGTCTTTTACTNTCTTGGNCCGCTTCGTGTACNGNNGCTTNTNGCTGTTGTGNNGGNGNAGTTNTNCNNTCGGCCNGAGGTNTNCTGGTNCCTGNATATNCAGNGGCCCTGCCCTGNTGTTGTTGTCTCTGNGTGTTGGCNCCNNACTCTTGNTTNCCCNNNTANNGCTTTGCTGCTGGAGCNGTACNATCTGAANAAAGGGGNTCCGGGCNNACCATATTNCNCCCCAGCTNCNTCCNNNTGTTNCTTGGAGCTNTTNGCTNNNATATNCTTGTAAAACNGG]

[+] EMBL BE229619             [CTTCCTTNGCGCCGCCCGCNTCCGNCGCGCGGCGGCGGCGGNGNTGTTGCGGCGGNTGCCNTNGATGGCGGNCNGGGNCTGGCGGTGGGNGCTGGNCNTGGANNCGCCGGCNNCANTNGAAGGCGCGGCNCGCCCNGTCCCNGGCGNCCCGCTGCCGCTCGGCCTNTNGCGGGGGCCCCGGGTCACCCGCACGNAGCAGCTCNNCTTNCTCCNCCGCTTNNTGGCCTNGCCGCTCGTCCCCTNCTNCTCCGCCTCCGGCGCCGGCCTNTNNGTCNNCCACGCCCACCTNGTNCNCNTNGCCCGCNGCTTGTCTTTTACTNTCTTGGNCCGCTTCGTGTACNGNNGCTTNTNGCTGTTGTGNNGGNGNAGTTNTNCNNTCGGCCNGAGGTNTNCTGGTNCCTGNATATNCAGNGGCCCTGCCCTGNTGTTGTTGTCTCTGNGTGTTGGCNCCNNACTCTTGNTTNCCCNNNTANNGCTTTGCTGCTGGAGCNGTACNATCTGAANAAAGGGGNTCCGGGCNNACCATATTNCNCCCCAGCTNCNTCCNNNTGTTNCTTGGAGCTNTTNGCTNNNATATNCTTGTAAAACNGG]




>consensus_12883#3
CTTCCTTNGCGCCGCCCGCNTCCGNCGCGCGGCGGCGGCGGNGNTGTTGCGGCGGNTGCC
NTNGATGGCGGNCNGGGNCTGGCGGTGGGNGCTGGNCNTGGANNCGCCGGCNNCANTNGA
AGGCGCGGCNCGCCCNGTCCCNGGCGNCCCGCTGCCGCTCGGCCTNTNGCGGGGGCCCCG
GGTCACCCGCACGNAGCAGCTCNNCTTNCTCCNCCGCTTNNTGGCCTNGCCGCTCGTCCC
CTNCTNCTCCGCCTCCGGCGCCGGCCTNTNNGTCNNCCACGCCCACCTNGTNCNCNTNGC
CCGCNGCTTGTCTTTTACTNTCTTGGNCCGCTTCGTGTACNGNNGCTTNTNGCTGTTGTG
NNGGNGNAGTTNTNCNNTCGGCCNGAGGTNTNCTGGTNCCTGNATATNCAGNGGCCCTGC
CCTGNTGTTGTTGTCTCTGNGTGTTGGCNCCNNACTCTTGNTTNCCCNNNTANNGCTTTG
CTGCTGGAGCNGTACNATCTGAANAAAGGGGNTCCGGGCNNACCATATTNCNCCCCAGCT
NCNTCCNNNTGTTNCTTGGAGCTNTTNGCTNNNATATNCTTGTAAAACNGG

consensusID : consensus_12883#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 488
fasta sequence

                              [GAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTGGCTCATCGTATCACATAAACATGATTTTCAAAGGCTTTCTTTCTCGTATTGGTGCCAATGAGAACTAGGTCAGGTGACTGTAGATGTTACGCAGTGTGCTTCATCAAGGCAGTTTGTAGATGTGATCAAGTTTATCTCGGTGTCTTGCATTCACCTGTTGAAGACTGTTATTCTTGTAGGCTGTAGTTCTGTTCATTGGTTAAAACAGCTTGCTGTTTAACAGGCAATGAGCCTTGACGGAGGGCAGTTCTTAGATTGTTTCGGTTCTGTAGAATAGTGTAGTTATGCAATAAGTCAATACGTGTCGACGCCAATATATTTCTAGTTGTGTTTCATACTTGCTTTGGGCATCGGAAGAATACTTGCTGATGTAAGTGATCGTCATCTGAATCCCGTCTGTTATATATTCATCCACTGATTGCTCGGTCAAAAAAAAAAAAAAAA]

[-] EMBL CF312140             [GAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTGGCTCATCGTATCACATAAACATGATTTTCAAAGGCTTTCTTTCTCGTATTGGTGCCAATGAGAACTAGGTCAGGTGACTGTAGATGTTACGCAGTGTGCTTCATCAAGGCAGTTTGTAGATGTGATCAAGTTTATCTCGGTGTCTTGCATTCACCTGTTGAAGACTGTTATTCTTGTAGGCTGTAGTTCTGTTCATTGGTTAAAACAGCTTGCTGTTTAACAGGCAATGAGCCTTGACGGAGGGCAGTTCTTAGATTGTTTCGGTTCTGTAGAATAGTGTAGTTATGCAATAAGTCAATACGTGTCGACGCCAATATATTTCTAGTTGTGTTTCATACTTGCTTTGGGCATCGGAAGAATACTTGCTGATGTAAGTGATCGTCATCTGAATCCCGTCTGTTATATATTCATCCACTGATTGCTCGGTCAAAAAAAAAAAAAAAA]
[+] EMBL AA749673             [                                      AGGTTGGCTCATCGTATCACATAAAGATGATTTTCAAAGGCTTTCTTTCTCGTATTGGTGCCAATGAGAACTAGGTCAGGTGACTGTAGATGTTACGCAG GTGCTTCATCAAGGCAGTTTGTAGATGTGATCAAGTTTATCTCGGTGTCTTGCATTCACCTGTTGAAGACTGTTATTCTTGTAGGCTGTAGTTGTGTTCATTGGTTAAAACAGCTT    NTTAACAG                                                                                                                                                                                                                             ]




>consensus_12883#4
GAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTGGCTCATCGTATCACAT
AAACATGATTTTCAAAGGCTTTCTTTCTCGTATTGGTGCCAATGAGAACTAGGTCAGGTG
ACTGTAGATGTTACGCAGTGTGCTTCATCAAGGCAGTTTGTAGATGTGATCAAGTTTATC
TCGGTGTCTTGCATTCACCTGTTGAAGACTGTTATTCTTGTAGGCTGTAGTTCTGTTCAT
TGGTTAAAACAGCTTGCTGTTTAACAGGCAATGAGCCTTGACGGAGGGCAGTTCTTAGAT
TGTTTCGGTTCTGTAGAATAGTGTAGTTATGCAATAAGTCAATACGTGTCGACGCCAATA
TATTTCTAGTTGTGTTTCATACTTGCTTTGGGCATCGGAAGAATACTTGCTGATGTAAGT
GATCGTCATCTGAATCCCGTCTGTTATATATTCATCCACTGATTGCTCGGTCAAAAAAAA
AAAAAAAA

consensusID : consensus_12883#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 160
fasta sequence

                              [CAAGGACACTGACATGGACTGAATGAGTAAAAAACTGGAAACCATGACACTGACGTGGACTGAAGGAGTATAAAACTGGACACGAGGACACTGACATGGACTGAATAGTAGTCGATCTATCGTACAACTTGAATTGTTGATGCGAATCACATCTGATAAA]

[+] EMBL CF327530             [CAAGGACACTGACATGGACTGAATGAGTAAAAAACTGGAAACCATGACACTGACGTGGACTGAAGGAGTATAAAACTGGACACGAGGACACTGACATGGACTGAATAGTAGTCGATCTATCGTACAACTTGAATTGTTGATGCGAATCACATCTGATAAA]




>consensus_12883#5
CAAGGACACTGACATGGACTGAATGAGTAAAAAACTGGAAACCATGACACTGACGTGGAC
TGAAGGAGTATAAAACTGGACACGAGGACACTGACATGGACTGAATAGTAGTCGATCTAT
CGTACAACTTGAATTGTTGATGCGAATCACATCTGATAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      CCTTTGCGCCGCCCGCGTCCGACGCGCGGCGGCGGCGGAGATGTTGCGGCGGATGCGATG 60
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      GATGGCGGACGGGGACGGGCGGTGGGAGCTGGACGTGGAGACGCCGGCGACGATGGAGGG 120
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      CGCGGCGCGCCCCGTCCCCGGCGACCCGCTGCCGCTCGGCCTCTCGCGGGGGCCCCGGGT 180
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      CACCCGCACGAAGCAGCTCGACTTCCTCCACCGCTTCATGGCCTCGCCGCTCGTCCCCTC 240
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      CTTCTCCGCCTCCGGCGCCGGCCTCTCCGTCCACCACGCCCACCTCGTCCACCTCGCCCA 300
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      CAACTTGTCTTTTACTATCTTGGAGCAACTTCATGTACAGAAGCTTGTAGCTGTTGTGAA 360
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      AGAGAAGTTATCAAATCGGCAAGAGGTCTCCTGGTCCAATGATATCAAAAGGCACCTGCA 420
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      TGATGTTATGTCTCTAGGTGTTGGCACAGAACTCTTGATTACACCAGATACCACTTTGCT 480
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      ACTGGAGCTGTACAATCTGAAGAAGGGGGATCGGGGCAAAGCAATATTTCGACACAAGCT 540
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      TCCTCATCAAAATATTACATTAGAAGCATCTTGGCCTGGATTATTCATTGATAAAAACGG 600
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      GGTTTACTGGGATGTGCCATTGTCATTATCAGCTGACCTGGCTTCAGTTGGCTCCGAGTC 660
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      TGGATTGAGTTATCATGTACTATTGCAGCAGAATAGTGGAGAACCAAAATGTTTTGGTGG 720
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      TGGTGAAGAAACCAGTGATGTTCCTGTTGCTCTGTTACCAGGGTTATGTGCTAAGGCAGC 780
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      TGTTTCGATTAAGAAAAGCATTGATGTTTGGAGGAAAAAAGAAGATAAGCTAAAAAATGT 840
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      CCAGCCGTATGATGTATTTCTCTCAGAACCTCATGTTTCGTTCACCGGGATCATTGGTGC 900
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      AGTAGCCAGTGGTTCTTTTGGGGATTGCTCAAAAAGAATGTCCATGCAAAATGAAATACT 960
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      AAAATCCAATGCCTTTAAATATTTTGATGAGAGGAACAAGTTTGCTGCCTTTGCAGACCT 1020
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      CTTTGCGTCTGTTAATTTTACAGCTCAACACGGGAATTTTCAGAGGCTTCTCCTGGATTT 1080
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      GACAAGGGTAAGCGCCCGGTTAGATATATCCTCAGGATCATTGTTCTTACGTGGTGCTTC 1140
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ------------------------------------------------------------
consensus_12883#3      ------------------------------------------------------------
consensus_12883#0      TCAGCTTGCACAAGATTTCTTCTTCTCTCGACGCCCTGATTTAGAGACATTCTGTGATGT 1200
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      ----------------------------------------TTAGAGACATTCTGTGATGT 20
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      -----------------------------------ATNCGGCACGNGCGGTCACCAGCTT 25
consensus_12883#3      ---------------------------------------------------------CTT 3
consensus_12883#0      TTGTCCTGATGTGATTGTTTCTCTTCAACAACAGATAGTTGGACCCTTCAGCTTTCGTGT 1260
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      TCGTCCTGATGTGATTGTTTCTCTTCAACAACAGATAGTTGGACCCTTCAGCTTTCGTGT 80
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      CCTTTGCGCCGCCCGCGTCCGACACGCGGCGGCGGCGGAAGATGTTGCGGCGGNTGCCAN 85
consensus_12883#3      CCTTNGCGCCGCCCGCNTCCGNCGCGCGGCGGCGGCGGN-GNTGTTGCGGCGGNTGCCNT 62
consensus_12883#0      TGAATCCACAGTTACCATTGACCCTAAAAAACAAGACCATTTCGTTCGTGTGGACGACTC 1320
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      TGAATCCACAGTTACCATTGACCCTAAAAAACAAGACCATTTCGTTCGTGTGGACGACTC 140
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      NGATGGCGGACGGGGACCGGCGGTGGGAGC--TGGACCTGGAAACACCNGCGNCNNTAGA 143
consensus_12883#3      NGATGGCGGNCNGGGNCTGGCGGTGGGNGC--TGGNCNTGGANNCGCCGGCNNCANTNGA 120
consensus_12883#0      AGTTTTTGCAATCGACTGGGCTCTGAAGGTCCTGGGTTCCGCAAAGGCCACTGCTTGGTA 1380
consensus_12883#4      ------------------------------------------------------------
consensus_12883#2      AGTTTTTGCAATCGACTGGGCTCTGAAGGTCATGGGTTCCGCAAAGGCCACTGCTTGGTA 200
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      AGGCGCGGCGCGCCCCGTCNCCGGCGNCCCGCTGCCGCTCGGCCTCTNGCGGGGGCCC-G 202
consensus_12883#3      AGGCGCGGCNCGCCCNGTCCCNGGCGNCCCGCTGCCGCTCGGCCTNTNGCGGGGGCCCCG 180
consensus_12883#0      TTCTCCTAAGCATCAGGAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTG 1440
consensus_12883#4      ----------------GAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTG 44
consensus_12883#2      TTCTCCTAAGCATCAGGAGGCAATGGTGGAGCTTCGGTTCTTTGAGACCTGAAGAGGTTG 260
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      GGTCACCCGCACGNANCNNCTCGNCTTCCTCCNCCGCTTCATGGCCTCGCCGCACGTCCN 262
consensus_12883#3      GGTCACCCGCACGNAGCAGCTCNNCTTNCTCCNCCGCTTNNTGGCCTNGCCGCTCGTCCC 240
consensus_12883#0      GCTCATCGTATCACATAAACATGATTT--TCAAAGGCTTTCTT-TCTCG-TATTGGTGCC 1496
consensus_12883#4      GCTCATCGTATCACATAAACATGATTT--TCAAAGGCTTTCTT-TCTCG-TATTGGTGCC 100
consensus_12883#2      GCTCATCGTATCACATAAACATGATTT--TCAAAGGCTTTCTT-TCTCGATATTGGTGCC 317
consensus_12883#5      -----------------------------------------------------------C 1
                                                                                   

consensus_12883#1      CNCCTACNCCGCCNCCGGCGCCGGCCTCTCCGTCCACCACGCCCNCCTCGTCCNCNTNGC 322
consensus_12883#3      CTNCTNCTCCGCCTCCGGCGCCGGCCTNTNNGTCNNCCACGCCCACCTNGTNCNCNTNGC 300
consensus_12883#0      AATGAGAACTAGGTCAGGTGACTG--TAGATGTTACGCA-GTGTGCTTCATCAAGGCAGT 1553
consensus_12883#4      AATGAGAACTAGGTCAGGTGACTG--TAGATGTTACGCA-GTGTGCTTCATCAAGGCAGT 157
consensus_12883#2      AACGAGAACTAGGTCAGGTGACTG--TAGATGCTACGCA-GTGTGCTTCATCAAGGCAGT 374
consensus_12883#5      AAGGACACTGACATGGACTGAATGAGTAAAAAACTGGAA--ACCATGACACTGACGTGGA 59
                                          *   *  *           *                   * 

consensus_12883#1      CCNCGNCT-TGTCTTNNNCNNTCTTGGNGCANCTTCNTGTACNCNNGCTNGTTGCTGTTG 381
consensus_12883#3      CCGCNGCT-TGTCTTTTACTNTCTTGGNCC-GCTTCGTGTACNGNNGCTTNTNGCTGTTG 358
consensus_12883#0      TTGTAGATGTGATCAAGTTTATCTCGGTGT---CTTGCATTCACCTGTTGAAGACTGTTA 1610
consensus_12883#4      TTGTAGATGTGATCAAGTTTATCTCGGTGT---CTTGCATTCACCTGTTGAAGACTGTTA 214
consensus_12883#2      TCGTAGAGGTGATCAAGTTTATCTCGGTGT---CTTGCATTCACCCGCCGAAGACTGTTA 431
consensus_12883#5      CTGAAGGAGTATAAAACTGGACACGAGGAC--ACTGACATGGACTGAATAGTAGTCGATC 117
                                *                *       *    *                * * 

consensus_12883#1      TGNNAGNCNGGTTATCCCNTCTGCNNNNGGTCTCCTGNTCCNNTGATATCCAAAGGGTAC 441
consensus_12883#3      TGNNGGNGNAGTTNTNCNNTCGGCCNGAGGTNTNCTGGTNCCTGNATATNCAGNGGC--C 416
consensus_12883#0      TTCTTGT-AGGCTGTAGTTCTGTTCATTGGTTAAAACAGCTTGCTGT-TTAACAGGCAAT 1668
consensus_12883#4      TTCTTGT-AGGCTGTAGTTCTGTTCATTGGTTAAAACAGCTTGCTGT-TTAACAGGCAAT 272
consensus_12883#2      TTTTGGC-AGGCTGTAGTTGTGGTCAGTGGTTAAAGCAGCCTGTTGT-TTAACAGGCAAT 489
consensus_12883#5      TATC-GTACAACTTGAATTGTTGATGCGAATCACATCTGATAAA---------------- 160
                       *    *      *                 *                             

consensus_12883#1      CTGCCTTANTGTTAT-GTCTCTNNGTGTTGGCNCCGNGAGC--NNTTGNTNNCCCCCANT 498
consensus_12883#3      CTGCCCTGNTGTTGTTGTCTCTGNGTGTTGGCNCCNNA-----CTCTTGNTTNCCCNNNT 471
consensus_12883#0      GAGCCTTGACGGAGGGCAGTTCTTAGATTGTTTCGGTTCTGTAGAATAGTGTAGTTATGC 1728
consensus_12883#4      GAGCCTTGACGGAGGGCAGTTCTTAGATTGTTTCGGTTCTGTAGAATAGTGTAGTTATGC 332
consensus_12883#2      GAGCCTTGAAG------ATCCCACCGCCCGTCCCCGTCC--------------GCCATCC 529
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ACCNCTNNNGCNGNTGGGNGCTGTNCAATCTNANAAAAGGGGGAATCNGGGCAAAGTCCA 558
consensus_12883#3      ANNGCTTTG-CTGCTGG-AGCNGTACNATCTGAANAAAGGGG--NTCCGGGCNNA--CCA 525
consensus_12883#0      AATAAGTCAATACGTGTCGACGACAATATATTTCTAGTTGTG--TTTCATACTTGCTTTG 1786
consensus_12883#4      AATAAGTCAATACGTGTCGACGCCAATATATTTCTAGTTGTG--TTTCATACTTGCTTTG 390
consensus_12883#2      ATCGCATC------------CGCCGCAACATCTCCGCCGCCG--CCGCGCGTCGGACGCG 575
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      TATTTNNACCNNGCTTNCCCNTCTNNAANATNCCNTNNGNNAGCTCTTGGCCNTGGATTA 618
consensus_12883#3      TATTNCNCCCCAGCTNCNTCCNNNTG-------TTNCTTGGAGCTNTTNGC--TNNNATA 576
consensus_12883#0      GGCATCAGAAGAATACTTGCTGATGTAAGTGATCGTCATCTGAATGCCGTCTGTTATATA 1846
consensus_12883#4      GGCATCGGAAGAATACTTGCTGATGTAAGTGATCGTCATCTGAATCCCGTCTGTTATATA 450
consensus_12883#2      GGCGGCGCAAAGGAAGCTGGTGACCGAGGCG----------------------------- 606
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      TTNTTNGNAAAAGNNCCGGGTTANC----------------------------------- 643
consensus_12883#3      TNCTTGTAAAACNGG--------------------------------------------- 591
consensus_12883#0      TTCATCCACTGATTGCTCGGTCAGGCCTGAAGAGTAGTTGATCTATCTTACAAGTTGAAT 1906
consensus_12883#4      TTCATCCACTGATTGCTCGGTCAAAAAAAAAAAAAAAA---------------------- 488
consensus_12883#2      ------------------------------------------------------------
consensus_12883#5      ------------------------------------------------------------
                                                                                   

consensus_12883#1      ----------------------------------------
consensus_12883#3      ----------------------------------------
consensus_12883#0      TGTTGATGCGAATCACATCTGATAAATGAAATCTTCTCAG 1946
consensus_12883#4      ----------------------------------------
consensus_12883#2      ----------------------------------------
consensus_12883#5      ----------------------------------------