|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12924#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1963 fasta sequence
[GCGACGCCCAACTCCTCACGCTTCCCTTCCCTTCCCTTCCCCCATCCATCCTCTCCTCCGACTCCGACCTCCCGCAACCGCAGCGCCGCCCGATCCGCCGCCACCGCCACCGCCACCGCCGGCAGCTCGATCCCCCGCACTCGGGGGGGTTTTGGAATTGGCGAATGGTGGCGAACGAGGTGGTTGCGGCGGCGGCGGTGGTGGAAGAACCGGCGCCCGCGTCGGCGGGGGCGGTTGACCCGATGAGGCTGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGGGCCGCGGCGGCCGAGATGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGCTCGGGCCTCTTCGCCGTCGTCTCTACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACGGCCACGACGTCGGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTACTACTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACCACCGAGAATTTCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGATATCATGGCGATGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTCACTTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACGAAAAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATATCCTACCATTGCAGTCCATAGTCAAGATGAAGAGGTGACAGTAAACTTTGGAAAAGAACCATTCTGTTTTGACATTGAGGGCTATATTTTTGAAGAGAAAATGAAGCAACAATCTGTCAGCGACAAATTGGATTTGCAACCAGACATCAGTCATTGGATTGTTCGTTCATATCTCCTACATTACGGCTACCAAGATACATTAAATTCTTTTGATATGGCAAGTGAAACTGATCCTCCATCCAATCATCAAAATGGTTATGGGGAACCTCCTGAAATGTATGGTCTTAGCCACAGAAAATTGCTGCGTCAGCTTATCATGAGTGGAGATATTGATTCTGCATTCAAAAAACTTGGAGAATGGTATCCACAGGTGATAAAGGATGAAACATCAATTATTTGCTTCTTACTCCATTCCCAAAGATTCATTGAATTTATCGGGGCTGGACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAACTTCTTGACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGCCCTGCTTGCATATGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGGGAATTTGTAGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGACCCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGCTTCGAGCGACGTGCATTCAGCGGAGACCAAGGGGATGCATTCTTACTACATA-AAGAAGTGCAGTCCTGCGATAGATCCAGGTGTTCCTAGGCATCAAAGCATTCAAGTTGCACCTGCATCTGAGCAGTGAACTCAGAGATGAGACTTTGTGCCCCTCTTGGAAGGAAAGGGATTCACCTCGGAGCGGAGATGTAGACCATGATCCATGCGCAATCACAGATACTTTGATTCTTGAAGTTTCGCAGTATACTCTCCACAAGGTGAACGCCTAACTGCTGGGAAATTTGGCAGCAGCTCCTTCCCTGTAATCTGAAAACTTACATTCACACATGGCCTTAAACATCTCTGTTTCCATAAACTCGGAAGCTTTGAGCTGGTAGACATTCTGAATGTGAAATGAGAAGAGAAAAACAATAAGATTTGTGTAAATGAAATCGAGTTGCCCTTTAACCTTGTGGTTCATTCTAATTCATTGATAC]
[+] EMBL AK066206 [GCGACGCCCAACTCCTCACGCTTCCCTTCCCTTCCCTTCCCCCATCCATCCTCTCCTCCGACTCCGACCTCCCGCAACCGCAGCGCCGCCCGATCCGCCGCCACCGCCACCGCCACCGCCGGCAGCTCGATCCCCCGCACTCGGGGGGGTTTTGGAATTGGCGAATGGTGGCGAACGAGGTGGTTGCGGCGGCGGCGGTGGTGGAAGAACCGGCGCCCGCGTCGGCGGGGGCGGTTGACCCGATGAGGCTGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGGGCCGCGGCGGCCGAGATGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGCTCGGGCCTCTTCGCCGTCGTCTCTACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACGGCCACGACGTCGGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTACTACTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACCACCGAGAATTTCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGATATCATGGCGATGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTCACTTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACGAAAAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATATCCTACCATTGCAGTCCATAGTCAAGATGAAGAGGTGACAGTAAACTTTGGAAAAGAACCATTCTGTTTTGACATTGAGGGCTATATTTTTGAAGAGAAAATGAAGCAACAATCTGTCAGCGACAAATTGGATTTGCAACCAGACATCAGTCATTGGATTGTTCGTTCATATCTCCTACATTACGGCTACCAAGATACATTAAATTCTTTTGATATGGCAAGTGAAACTGATCCTCCATCCAATCATCAAAATGGTTATGGGGAACCTCCTGAAATGTATGGTCTTAGCCACAGAAAATTGCTGCGTCAGCTTATCATGAGTGGAGATATTGATTCTGCATTCAAAAAACTTGGAGAATGGTATCCACAGGTGATAAAGGATGAAACATCAATTATTTGCTTCTTACTCCATTCCCAAAGATTCATTGAATTTATCGGGGCTGGACAAATGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAACTTCTTGACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGCCCTGCTTGCATATGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGGGAATTTGTAGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGACCCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGCTTCGAGCGACGTGCATTCAGCGGAGACCAAGGGGATGCATTCTTACTACATA AAGAAGTGCAGTCCTGCGATAGATCCAGGTGTTCCTAGGCATCAAAGCATTCAAGTTGCACCTGCATCTGAGCAGTGAACTCAGAGATGAGACTTTGTGCCCCTCTTGGAAGGAAAGGGATTCACCTCGGAGCGGAGATGTAGACCATGATCCATGCGCAATCACAGATACTTTGATTCTTGAAGTTTCGCAGTATACTCTCCACAAGGTGAACGCCTAACTGCTGGGAAATTTGGCAGCAGCTCCTTCCCTGTAATCTGAAAACTTACATTCACACATGGCCTTAAACATCTCTGTTTCCATAAACTCGGAAGCTTTGAGCTGGTAGACATTCTGAATGTGAAATGAGAAGAGAAAAACAATAAGATTTGTGTAAATGAAATCGAGTTGCCCTTTAACCTTGTGGTTCATTCTAATTCATTGATAC]
[-] EMBL CB618760 [ ACATC AGTATTTGCTTCTTACTCCATTCCCAAAGATTCATTGAATTTATCGGGGCTGGACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAACTTCTTGACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGCCCTGCTTGCATATGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGGGAATTTGTAGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGACCCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGCTTCGAGCGACGTGCATTCAACGGAGACCAAGGGGATGCATTCTTACTTCATA AAGAAGTGCAGTCCTGCGATAGATCCCGGTGTTCCTAGGCATCAAAGTATTCAAGTTGCACCTGCATCTGAGCAGTGAACTCAGAGATGAGTCTTGGTGCCCCTCTTGGAAGGAAAGGGGTTCACCTCCGAGCGGAGATGTAGACCGTGATCCATGCGCGATCACAGATAC TTGATTCTTGAAGTTTCGCAGTATACTCTCCACAAGGTGAATGCCTAACTTCTGGGAAATTTGGCAGCAGCTCCTTCCCTGTAATCTGAAAGCTTACATTCACACATGGCCTT AACATCTCTGTTTCCATAAACTCGGAAGCTTTGAGCTGGTAGACATTCTGAATGTGAAATCAGAAGAGAAAAACAATAAGATTTGTGTAAATGAAATCGAG ]
[-] EMBL CB668178 [ CAATTATTTGCTTCTTACTCCATTCCCAAAGATTCATTGAATTTATCGGGGCTGGACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAACTTCTTGACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGCCCTGCTTGCATATGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGGGAATTTGTAGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGACCCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGCTTCGAGCGACGTGCATTCAGCGGAGACCAAGGGGATGCATTCTTACTACATA AAGAAGTGCAGTCCTGCGATAGATCCAGGTGTTCCTAGGCATCAAAGCATTCAAGTTGCACCTGCATTTGAGCAGTGAACTCAGAGATGAGACTTTGTGCCCCTCTTGGAAGGAAAGGGATTCACCTCGGAGCGGAGATGTAGACCATGATCCATGCGCAATCACAGATACTTTGATTCTTGAAGTTTCGCAGTATACTCTCCACAAGGTGAACGCCTAACTGCTGGGAAATTTGGCAGCAGCTCCTTCCCTGTAATTTGAAAACTTACATTCACACATGGCCTTAAACATCTCTGTTTCCATAAACTCGGAAGCTTTGAGCTGGTAGACATTCTGAATGTGAAATGAGAAGAGAAAAACAATAAGATTGGTGTAAATGAAATCGAG ]
[+] EMBL CA765250 [ AAAGGAGAGCGTGGCCCTGCTTGCATATGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGGGAATTTGTAGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGACCCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGCTTCGAGCGACGTGCATTCAGCGGAGACCAAGGGGATGCATTCTTACTACATA AAGAAGTGCAGTCCTGCGATAGATCCAGGTGTTCCTAGGCATCAAAGCATTCAAGTTGCACCTGCATCTGAGCAGTGAACTCAGAGATGAGACTTTGTGCCCCTCTTGGAAGGAAAGGGATTCACCTCGGAGTGGAGATGTAGACCATGATCCATGCGCAATCACAGATACTTTGATTCTTGAAGTTTCGCAGTATACTCCCCACAAGGTGAACACCTAACTGCTGGGAAATTTGGCAGCAGCTCCTTCCCTGTAATCTGAAAACTTACATTCACACATGGCCTTAAACATCTCTGTTTCCATAAACTCGGAAGCTTTGAGCTGGTAGACATTTTGAATGTGAAATGAGAAGAGAAAAACAATAAGATTTGTGTAAATGAAATCGAGTTGCCCTT ]
[+] EMBL BE228296 [ CACAGCGGGANTTTGTNNCGGATGCNGTGAATGCAGCTGTCCTGTCAANGAANCCGAACATGAAGGACCCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGCTTCGAGCGACGTGCATTCAGCGGAGACCAAGGGGATGCATTCTTACTACATA AAGAAGTGCAGTCCTGCGATAGATCCAGGTGTTCCTAGGCATCAAAGCATTCAAGTTGCACCTGCATCTGAGCAGTGAACTCAGAGATGAGACTTTGTGCCCCTCTTGGAAGGAAAGGGATTCACCTCGGAGCGGAGATGTNGACCATGATCCATGCGCNATCACNGATACTTTGATTCTTGAAGTTTCGCAGTATACTCTCCACNAGGTGAACGCCTAACTGCTGGGAAATTTGGCAGCAGCTCCTTCCCTGTTATCTGAAAACTTACATTCCCCCNTGGGCCTAAACATCTCTGTTTCCATAAACTCGGAAGCTTTGAGCTGGTAGACATTCTGAATGTGAAATGAGAAGA AAAAACCATNNGATTTGTGTt ]
[+] EMBL BM420944 [ GGCAGCTCACAGTATGCAGCTTCGAGCGACGTGCATTCAGCGGAGACCAAGGGGATGCATTCTTACTACATANAAGAAGTGCAGTCCTGCGATAGATCCAGGTGTTCCTAGGCATCAAAGCATTCAAGTTGCACCTGCATCTGAGCAGTGAACTCAGAGATGAGACTTTGTGCCCCTCTTGGAAGGAAAGGGATTCACCTCGGAGTGGAGATGTAGACCATGATCCATGCGCAATCACAGATACTTTGATTCTTGAAGTTTCGCAGTATACTCTCCACAAGGTGAACACCTAACTGCTGGGAAATTTGGCAGCAGCTCCTTCCCTGTAATCTGAAAACTTACATTCACACATGGCCTTAAACATCTCTGTTTCCATAAACTCGGAAGCTTTGAGCTGGTAGACATTCTGAATGTGAAATGAGAAGAGAAAAAC ATAAGATTTGTGTAAATGAAATCGAGTTGCCCTTTAAaaaaa ]
consensusID : consensus_12924#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1102 fasta sequence
[TCCCTTCCCTTCCCTAGTTCCCTTCCCCCATCCATCCTCTCCTCCGACTCCGACCTCCCGCAACCGCAGCGCCGCCCGATCCGCCGCCACCGCCGGCAGCTCGATCCCCCGCGCTCGGGGGGGTTGGAATTGGCGAATGGTGGCGAACGAGGTGGTTGCGGCGACGGTGGTGGAAGAACCGGCGCCCGCGTCGGCGGGGGCGGTTGACCCGATGAGGCTGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGGGCCGCGGCGGCCGAGATGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGCTCGGGCCTCTTCGCCGTCGTCTCCACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACGGCCACGACGTCGGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTACTACTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACCACCGAGAACTTCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGATATCATGGCGACGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTCACTTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACGAAAAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATATCCTACCATTGCAGTCCATAGTCAAGATGAAGACTTTTCAATGGATCTGATTGTTCATTTTTGCAAATCAGGGTGACAGTAAACTTTGGAAAAGAACCATTCTGTTTTGACATTGAGGGCTATATTTTTGAAGAGAAAATGAAGCAACAATCTGTCAGCGACAAATTGGATTTGCAACCAGACATCAGTCATTGGATTGTTCGTTCATATCTCCTACATTACGGCTACCAAGATACATTAAATTCTTTTGATATGGCAAGTGAAACTGATCCTCCATCCAATCATCAAAATGGTTATGGGGAACCTCCTGAAATGTATGGTCTTAGCCACAGAAAATTGCTGCGTCAGCTTATCATGAGTGGAGATATTG]
[+] EMBL CB629826 [TCCCTTCCCTTCCCTAGTTCCCTTCCCCCATCCATCCTCTCCTCCGACTCCGACCTCCCGCAACCGCAGCGCCGCCCGATCCGCCGCCACCGCCGGCAGCTCGATCCCCCGCGCTCGGGGGGGTTGGAATTGGCGAATGGTGGCGAACGAGGTGGTTGCGGCGACGGTGGTGGAAGAACCGGCGCCCGCGTCGGCGGGGGCGGTTGACCCGATGAGGCTGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGGGCCGCGGCGGCCGAGATGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGCTCGGGCCTCTTCGCCGTCGTCTCCACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACGGCCACGACGTCGGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTACTACTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACCACCGAGAACTTCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGATATCATGGCGACGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTCACTTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACGAAAAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATATCCT ]
[+] EMBL CB618759 [ ACCTCCCCCAACCGCAGCGCCGCCCGATCCGCCGCCACCGCCGGCAGCTCGATCCCCCGCGCTCGGGGGGGTTGGAATTCCCGAATGGTGGCGAACGAGGTGGTTGCGGCGACGGTGGTGGAAGAACCGGCGCCCGCGTCGGCGGGGGCGGTTGACCCGATGAGGCTGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGGGCCGCGGCGGCCGAGATGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGCTCGGGCCTCTTCGCCGTCGTCTCCACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACGGCCACGACGTCCGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTACTACTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACCACCGAGAACTTCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGATATCATGGCGACGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTCACTTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACGAAAAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCAC ]
[+] EMBL CB668177 [ GGCCTCTTCGCCGTCGTCTCTACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACGGCCACGACGTCGGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTACTACTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACCACCGAGAATTTCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGATATCATGGCGATGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTCACTTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACGAAAAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATATCCTACCATTGCAGTCCATAGTCAAGATGAAGACTTTTCAATGGATCTGATTGTTCATTTTTGCAAATCAGGGTGACAGTAAACTTTGGAAAAGAACCATTCTGTTTTGACATTGAGGGCTATATTTTTGAAGAGAAAATGAAGCAACAATCTGTCAGCGACAAATTGGATTTGCAACCAGACATCAGTCATTGGATTGTTCGTTCATATCTCCTACATTACGGCTACCAAGATACATTAAATTCTTTTGATATGGCAAGTGAAACTGATCCTCCATCCAATCATCAAAATGGTTATGGGGAACCTCCTGAAATGTATGGTCTTAGCCACAGAAAATTGCTGCGTCAGCTTATCATGAGTGGAGATATTG]
consensusID : consensus_12924#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 745 fasta sequence
[GCTGGACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAACTTCTTGACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGCCCTGCTTGCATATGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGGGAATTTGTAGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGACCCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGCTTCGAGCGACGTGCATTCAACGGAGACCAAGGGGATGCATTCTTACTTCATAAAGAAGTGCAGTCCTGCGATAGATCCCGGTGTTCCTAGGCATCAAAGTATTCAAGTTGCACCTGCATCTGAGCAGTGAACTCAGAGATGAGTCTTGGTGCCCCTCTTGGAAGGAAAGGGGTTCACCTCCGAGCGGAGATGTAGACCGTGATCCATGCGCGATCACAGATACT--TGATTCTTGAAGTTTCGCAGTATACTCTCCACAAGGTGAATGCCTAACTTCTGGGAAATTTG-GCAGCAGCTCCTTCCCTGTAATCTGAAAGCTTACATTCACACATGGCCTT-AACATCTCTGTTTCCATAAACTCGGAAGCTTTGAGCTGGTAGACATTCTGAATGTGAAATCAGAAGAGAAAAACAATAAGATTTGTGGAAATGAAATCGAGTGGCCCTTTATAAAAAAAAAAAAAAA]
[-] EMBL CB629827 [GCTGGACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAACTTCTTGACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGCCCTGCTTGCATATGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGGGAATTTGTAGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGACCCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGCTTCGAGCGACGTGCATTCAACGGAGACCAAGGGGATGCATTCTTACTTCATAAAGAAGTGCAGTCCTGCGATAGATCCCGGTGTTCCTAGGCATCAAAGTATTCAAGTTGCACCTGCATCTGAGCAGTGAACTCAGAGATGAGTCTTGGTGCCCCTCTTGGAAGGAAAGGGGTTCACCTCCGAGCGGAGATGTAGACCGTGATCCATGCGCGATCACAGATACT TGATTCTTGAAGTTTCGCAGTATACTCTCCACAAGGTGAATGCCTAACTTCTGGGAAATTTG GCAGCAGCTCCTTCCCTGTAATCTGAAAGCTTACATTCACACATGGCCTT AACATCTCTGTTTCCATAAACTCGGAAGCTTTGAGCTGGTAGACATTCTGAATGTGAAATCAGAAGAGAAAAACAATAAGATTTGTGGAAATGAAATCGAGTGGCCCTTTATAAAAAAAAAAAAAAA]
[+] EMBL BI812202 [ CTCGGAGTGGAGATGTAGACCATGATCCATGCGCAATCACAGATACTTGTGATTCTTGAAGTTTCGCAGTATACTCTCCACAAGGTGAACACCTAACTGCTGGGAAATTTGCGCAGCAGCTCCTTCCCTGTAATCTGAAAACTTACATTCACACATGGCCTTAAACATCTCTGTTTCCATAAACTCGGAAGCTTTGAGCTGGTAGACATTCTGAATGTGAAATGAGAAGAGAAAAAC ATAAGATTTGTGTAAATGAAATCGAGTTGCCCTTT TAAAAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12924#0 GCGACGCCCAACTCCTCACGCTTCCCTTCCCTTCCCTTCCCCCATCCATCCTCTCCTCCG 60
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 ACTCCGACCTCCCGCAACCGCAGCGCCGCCCGATCCGCCGCCACCGCCACCGCCACCGCC 120
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 GGCAGCTCGATCCCCCGCACTCGGGGGGGTTTTGGAATTGGCGAATGGTGGCGAACGAGG 180
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 TGGTTGCGGCGGCGGCGGTGGTGGAAGAACCGGCGCCCGCGTCGGCGGGGGCGGTTGACC 240
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 CGATGAGGCTGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGGGCCGCGGCGGCCGAGA 300
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 TGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGCTCGGGCCTCTTCGCCG 360
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 TCGTCTCTACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACGGCCACGACG 420
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 TCGGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTACTACTTCGAGA 480
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 TGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACCACCGAGAATT 540
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 TCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGATATCATGGCGATGATG 600
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 GCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTCACTTCTGGTG 660
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 ACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACGAAAAATGGAT 720
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 CTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATATCCTACCATTGCAGTCC 780
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 ATAGTCAAGATGAAGAGGTGACAGTAAACTTTGGAAAAGAACCATTCTGTTTTGACATTG 840
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 AGGGCTATATTTTTGAAGAGAAAATGAAGCAACAATCTGTCAGCGACAAATTGGATTTGC 900
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 AACCAGACATCAGTCATTGGATTGTTCGTTCATATCTCCTACATTACGGCTACCAAGATA 960
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 CATTAAATTCTTTTGATATGGCAAGTGAAACTGATCCTCCATCCAATCATCAAAATGGTT 1020
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 ATGGGGAACCTCCTGAAATGTATGGTCTTAGCCACAGAAAATTGCTGCGTCAGCTTATCA 1080
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 ------------------------------------------------------------
consensus_12924#0 TGAGTGGAGATATTGATTCTGCATTCAAAAAACTTGGAGAATGGTATCCACAGGTGATAA 1140
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 -------------------------------------TCCCTTCCCTTCCCTAGTTCCCT 23
consensus_12924#0 AGGATGAAACATCAATTATTTGCTTCTTACTCCATTCCCAAAGATTCATTGAATTTATCG 1200
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 TCCCCCATCCATCCTCTCCTCCGACTCCGACCTCCCGCAACCGCAGCGCCGCCCGATCCG 83
consensus_12924#0 GGGCTG--GACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAACTTCTT 1258
consensus_12924#2 --GCTG--GACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAACTTCTT 56
consensus_12924#1 CCGCCACCGCCGGCAGCTCGATCCCCCGCGCTCGGGGGGGTTGGAATTGGCGAA--TGGT 141
** * * * * *** * * * * * * **** ** * *
consensus_12924#0 GACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGC-CCTGCTTGCATATGAAA 1317
consensus_12924#2 GACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGC-CCTGCTTGCATATGAAA 115
consensus_12924#1 GGCGAACGAGGTGGTTGCGGCGACGGTGGTGGAAGAACCGGCGCCCGCGTCGGCGGGGGC 201
* * * * * *** * * * * *** *** ** ** * *
consensus_12924#0 AGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCAC---AGCGGGAATTTGTAG 1374
consensus_12924#2 AGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCAC---AGCGGGAATTTGTAG 172
consensus_12924#1 GGTTGACCCGATGAGGC-TGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGGGCCGCGG 260
* ** ** ** * * * * * ** ** ** *** * *
consensus_12924#0 CGGATGCAGTGAATGCAG--------CTGTCCTG--TCAACGAACCCGAACATGAAGGAC 1424
consensus_12924#2 CGGATGCAGTGAATGCAG--------CTGTCCTG--TCAACGAACCCGAACATGAAGGAC 222
consensus_12924#1 CGGCCGAGATGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGCTCGGGCC 320
*** * ** * ** * * **** ***** ** * ** *
consensus_12924#0 CCTGAGA-GTTGCCTTTACTCAT---GTCTCGAGAAACTACTGAGGCAGCTCACAGTATG 1480
consensus_12924#2 CCTGAGA-GTTGCCTTTACTCAT---GTCTCGAGAAACTACTGAGGCAGCTCACAGTATG 278
consensus_12924#1 TCTTCGCCGTCGTCTCCACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACG 380
** * ** * ** ** * * ** * *** *** * *** * *
consensus_12924#0 ----CAGCTTCGAGCGACGTGCAT-TCAGCGG----AGACCAAGGGGATGCATTCT---- 1527
consensus_12924#2 ----CAGCTTCGAGCGACGTGCAT-TCAACGG----AGACCAAGGGGATGCATTCT---- 325
consensus_12924#1 GCCACGACGTCG-GCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTAC 439
* * *** *** ****** ** * * ** * * * ** *
consensus_12924#0 TACTACATAA--------AGAAGTGCAGTCCTGC---GATAGATCCAGGTGTTCCTAGGC 1576
consensus_12924#2 TACTTCATAA--------AGAAGTGCAGTCCTGC---GATAGATCCCGGTGTTCCTAGGC 374
consensus_12924#1 TACTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACC 499
**** * * * * ** * ** * * *** * * * * *
consensus_12924#0 ATCAAAGCATTCAAGTTGCACCTGCATCTGAGCAGTGAACT---CAGAGATGAGACTTTG 1633
consensus_12924#2 ATCAAAGTATTCAAGTTGCACCTGCATCTGAGCAGTGAACT---CAGAGATGAGTCTTGG 431
consensus_12924#1 ACCGAGAACTTCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGATATCAT 559
* * * ****** *** ** ** * ** * ** *** ** *
consensus_12924#0 TGCCCCTCTTGGAAGGAAAGGGATTCACCTCGGAGCGGAGA----TGTAGACCATGATCC 1689
consensus_12924#2 TGCCCCTCTTGGAAGGAAAGGGGTTCACCTCCGAGCGGAGA----TGTAGACCGTGATCC 487
consensus_12924#1 GGCGACGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTC 619
** * * * * * *** ** * ** * * * ** ** *
consensus_12924#0 ATGCGCAATCACA-----GATACTTTGATTCTTGAAGTTTCGCAGTA--TACTCTCCAC- 1741
consensus_12924#2 ATGCGCGATCACA-----GATACTT-GATTCTTGAAGTTTCGCAGTA--TACTCTCCAC- 538
consensus_12924#1 ACTTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACG 679
* * *** * * ** ** * * ** ** * * *** ***
consensus_12924#0 -AAGGTGAACGCCTAACT------GCTGGGAAATTTGGCAGCAGCTCCTTCCCTGTAATC 1794
consensus_12924#2 -AAGGTGAATGCCTAACT------TCTGGGAAATTTGGCAGCAGCTCCTTCCCTGTAATC 591
consensus_12924#1 AAAAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATATCCTACC 739
** ** * *** * * *** * ** * * * * *
consensus_12924#0 -TGAAAACTTACATTCA---CACATGGCCTTAAACATCTCTGTTTCCATAAACTCGGAAG 1850
consensus_12924#2 -TGAAAGCTTACATTCA---CACATGGCCTTAA-CATCTCTGTTTCCATAAACTCGGAAG 646
consensus_12924#1 ATTGCAGTCCATAGTCAAGATGAAGACTTTTCAATGGATCTGATTGTTCATTTTTGCAAA 799
* * * * *** * ** * **** ** * * * **
consensus_12924#0 CTTTGA-GCTGGTAGACATTCTGAATGTGAAATGAGAA---GAGAAAAACAATAAGATTT 1906
consensus_12924#2 CTTTGA-GCTGGTAGACATTCTGAATGTGAAATCAGAA---GAGAAAAACAATAAGATTT 702
consensus_12924#1 TCAGGGTGACAGTAAACTTTGGAAAAGAACCATTCTGTTTTGACATTGAGGGCTATATTT 859
* * *** ** ** ** * ** ** * * * ****
consensus_12924#0 GTGTAAATGAAATCGAGTTGCCCTTTAACCTTGTGGTTCATTCTAATTCATTGATAC--- 1963
consensus_12924#2 GTGGAAATGAAATCGAGTGGCCCTTTA---TAAAAAAAAAAAAAAA-------------- 745
consensus_12924#1 TTGAAGAGAAAATGAAGCAACAATCTG---TCAGCGACAAATTGGATTTGCAACCAGACA 916
** * * **** ** * * * * * *
consensus_12924#0 ------------------------------------------------------------
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 TCAGTCATTGGATTGTTCGTTCATATCTCCTACATTACGGCTACCAAGATACATTAAATT 976
consensus_12924#0 ------------------------------------------------------------
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 CTTTTGATATGGCAAGTGAAACTGATCCTCCATCCAATCATCAAAATGGTTATGGGGAAC 1036
consensus_12924#0 ------------------------------------------------------------
consensus_12924#2 ------------------------------------------------------------
consensus_12924#1 CTCCTGAAATGTATGGTCTTAGCCACAGAAAATTGCTGCGTCAGCTTATCATGAGTGGAG 1096
consensus_12924#0 ------
consensus_12924#2 ------
consensus_12924#1 ATATTG 1102
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||