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Oryza sativa
cluster # 12934 cluster # 12934       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12934#0 length = 2039 sequences # 9  
consensus_12934#1 length = 775 sequences # 2  

consensusID : consensus_12934#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2039
fasta sequence
                              [TGAAGCCCACCACCGGCACCGCCGCCGCCGCCGCCGTCGATCGCCGCTGGCTTCTCCCCCTCGCCATCGGCTCCGCCCTCTCCCTCCTCCTCCTCGTCCTCCTCACCACCTTCCCCCTCCCCTTCCCCTTCCCCTCCTCCGCCGCCTCCCGCCCTCCCAACCCCACCCTCTTCGTCGAGCACAAGCTCGCCCCCTCCCCGCCATCCACCGCTACCCCCCCTCGCTTCGCCTACCTCATCTCCGGCTCCGCGGGCGACGCCGCCGCGCTCCGCCGCGTCCTCCTCGCGCTCTACCACCCCAGGAACCTCTACATCCTCCACCTCGATGCCGAGGCGCCAGACTCCGACCGGGCCAACCTCGCCGCCGACCTCGCCGACCACCCTGTCATCGCCGCCGCCGCCAACGTCCACGTCATCCAACGGGCCAACCTCGTCACCTACCGTGGCCCCACCATGGTCGCCAACACCCTCCACGCCGCCGCCGCCTTCCTCTACACCAACCAACACCCGCACTTGGAGTGGGACTGGTTCATCAACCTCTCCGCCTCCGACTACCCGCTCCTCACGCAGGATGATCTGATCCATGTGTTCTCCAAGCTGCCTCGCGGTCTCAACTTCATCGACCACACCAGCAACATTGGGTGGAAGGAGTATCAGAGGGCCAAGCCGGTCATCATTGACCCTGGCCTCTACATGAAGAAGAAGGCCGATGTCTTCTGGATCCCGCAGCGCCGGAGTGTCCCCACTGCCTTCAAGCTCTTCACCGGGTCTGCTTGGATGGCCCTGTCTAAGCCGTTTGTCGAATACTGCATATGGGGCTGGGACAACCTTCCAAGGACTGTACTCATGTACTACGCCAATTTCATCTCTTCACCAGAAGGCTACTTCCACACTGTGGTCTGCAATGCTGAGGAGTTTAAAAATACCACGGTGAACCATGACCTGCATTACATATCATGGGACAACCCTCCG-AAGCAGCATCCGCACTACCTCACAATTGAAGACTTGGACAGGATGGTTGCTAGCGATGCACCATTTGCTCGGAAGTTTCATGCAGATGACCCGGTTCTAGACAAGATAGATGCGGAGATCCTGTTGCGTGGCCCAGACATGCTCACTCCTGGAGGATGGTGTGGAGGGACACGAGAAAATGGAAGTGACCCTTGCTCAGTCATCGG-CAATACCACTCACCTTCAGCCTGGTCGAGGAGCTGTA-CGGCTGCAGCGGCTCATGACGTCGCTCCTGTCAGAGGAGAAGTTTCACCCA-AGGCAGTGCAAGTGAT-GTGTTTCTGACTGAAGAAGGCT-CTGTGGATGGAGAGTGCTCCT-GGTGATATATGGCTGTTCTGACCCATATTTCACCGTTTTGTCGGGCAGCTTCCTTTTTTTTTGAGG--TTTTTTTTTTGAGGGAGGCAGCTTCCA-TTTTAACCTGTGCAATATAAGTTTTAGGAGCACGCCACTACATCGAT-CA-GTTTGTTGTATGCTGATATTGTGTCATCCCTTAGTACAAACACGAGATGAATGTATCATCCACGGTCTGAAGTGAAAATTGAATGGAAAATTAAAGTTGGTGA---AAAAAAAAAAAAAAAAAAAAAGAAATAACAACATAAATAACGAGAGCTCTAGAACCCTCCTGATCTTCGCCGGTTGTCGGGTTGTTCGTGCCTTCGTCATATAAATGTTATGCTTTTGATCGTGTCGGGGGCCGGCTTCCGTTTTATAATATATTAAATAGTTAGTTATATCTTCTAAGTGCTGTCGTTCTCCACCGCGCCTCCGTTTTACTAGCCCATAATACCGGAATACGCCCCCTGGTCAACAGCAGATAGTATAGACGCCTGCGCTACGAGTGCTCGATAGCACCTAACGAGCCTCCTCCTTATTTTTTATTTGAATTAGTTTCATATCGTTCTCCAATTTGATAATTATGATAAGGTCATCATGTGATGGCTTTACGGTTGTGTTTCATGCCCTTTAATGAATCACAGTAGACCGTGANAGGTCGCTAATAATCTATAATTCTCGACAAATTGAGGCGTTTGTG]

[+] EMBL AK069880             [TGAAGCCCACCACCGGCACCGCCGCCGCCGCCGCCGTCGATCGCCGCTGGCTTCTCCCCCTCGCCATCGGCTCCGCCCTCTCCCTCCTCCTCCTCGTCCTCCTCACCACCTTCCCCCTCCCCTTCCCCTTCCCCTCCTCCGCCGCCTCCCGCCCTCCCAACCCCACCCTCTTCGTCGAGCACAAGCTCGCCCCCTCCCCGCCATCCACCGCTACCCCCCCTCGCTTCGCCTACCTCATCTCCGGCTCCGCGGGCGACGCCGCCGCGCTCCGCCGCGTCCTCCTCGCGCTCTACCACCCCAGGAACCTCTACATCCTCCACCTCGATGCCGAGGCGCCAGACTCCGACCGGGCCAACCTCGCCGCCGACCTCGCCGACCACCCTGTCATCGCCGCCGCCGCCAACGTCCACGTCATCCAACGGGCCAACCTCGTCACCTACCGTGGCCCCACCATGGTCGCCAACACCCTCCACGCCGCCGCCGCCTTCCTCTACACCAACCAACACCCGCACTTGGAGTGGGACTGGTTCATCAACCTCTCCGCCTCCGACTACCCGCTCCTCACGCAGGATGATCTGATCCATGTGTTCTCCAAGCTGCCTCGCGGTCTCAACTTCATCGACCACACCAGCAACATTGGGTGGAAGGAGTATCAGAGGGCCAAGCCGGTCATCATTGACCCTGGCCTCTACATGAAGAAGAAGGCCGATGTCTTCTGGATCCCGCAGCGCCGGAGTGTCCCCACTGCCTTCAAGCTCTTCACCGGGTCTGCTTGGATGGCCCTGTCTAAGCCGTTTGTCGAATACTGCATATGGGGCTGGGACAACCTTCCAAGGACTGTACTCATGTACTACGCCAATTTCATCTCTTCACCAGAAGGCTACTTCCACACTGTGGTCTGCAATGCTGAGGAGTTTAAAAATACCACGGTGAACCATGACCTGCATTACATATCATGGGACAACCCTCCG AAGCAGCATCCGCACTACCTCACAATTGAAGACTTGGACAGGATGGTTGCTAGCGATGCACCATTTGCTCGGAAGTTTCATGCAGATGACCCGGTTCTAGACAAGATAGATGCGGAGATCCTGTTGCGTGGCCCAGACATGCTCACTCCTGGAGGATGGTGTGGAGGGACACGAGAAAATGGAAGTGACCCTTGCTCAGTCATCGG CAATACCACTCACCTTCAGCCTGGTCGAGGAGCTGTA CGGCTGCAGCGGCTCATGACGTCGCTCCTGTCAGAGGAGAAGTTTCACCCA AGGCAGTGCAAGTGAT GTGTTTCTGACTGAAGAAGGCT CTGTGGATGGAGAGTGCTCCT GGTGATATATGGCTGTTCTGACCCATATTTCACCGTTTTGTCGGGCAGCTTCCTTTTTTTTTGAGG   TTTTTTTTTGAGGGAGGCAGCTTCCA TTTTAACCTGTGCAATATAAGTTTTAGGAGCACGCCACTACATCGAT CA GTTTGTTGTATGCTGATATTGTGTCATCCCTTAGTACAAACACGAGATGAATGTATCATCCACGGTCTGAAGTGAAAATTGAATGGAAAATTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA764520             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATGGCCCTGTCTAAGCCGTTTGTCGAATACTGCATATGGGGCTGGGACAACCTTCCAAGGACTGTACTCATGTACTACGCCAATTTCATCTCTTCACCAGAAGGCTACTTCCACACTGTGGTCTGCAATGCTGAGGAGTTTAAAAATACCACGGTGAACCATGACCTGCATTACATATCATGGGACAACCCTCCG AAGCAGCATCCGCACTACCTCACAATTGAAGACTTGGACAGGATGGTTGCTAGCGATGCACCATTTGCTCGGAAGTTTCATGCAGATGACCCGGTTCTAGACAAGATAGATGCGGAGATCCTGTTGCGTGGCCCAGACATGCTCACTCCTGGAGGATGGTGTGGAGGGACACGAGAAAATGGAAGTGACCCTTGCTCAGTCATCGG CAATACCACTCACCTTCAGCCTGGTCGAGGAGCTGTA CGGCTGCAGCGGCTCATGACGTCGCTCCTGTCAGAGGAGAAGTTTCACCCA AGGCAGTGCAAGTGAT GTGTTTCTGACTGAAGAAGGCT CTGTGGATGGAGAGTGCTCCT GGTGATATATGGTTGTTCTGACCCATATTTCACCGTTTTGTCGGGCAGCTTCC TTTTTTTTGANG   NTTTTTTTTGAGGGAGGCAGCTTTCA TTTTAACCTGTGCAATATAAGNTTTANGAGCACGCCACTACATCGAT CA GNTTGGTGNATGCTGATATTGGGTCATCCCTTAGTACAAACACGAGATGAATGTATCATNCACGGTCTGAAGNGAAAATTGAATGGNAAANT AAGGTGGNGATC AAAAAAAAAAAAAAAAAAAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL OSC09011             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ncnCATGACCTGCATTACATATCATGGGACAACCCTCCGCAAGCAGCATCCGCACTACCTCACAATTGAAGACTTGGACAGGATGGTTGCTAGCGATGCACCATTTGCTCGGAAGTTTCATGCAGATGACCCGGTTCTAGACAAGATAGATGCGGAGATCCTGTTGCGTGGCCCAGACATGCTCACTCCTGGAGGATGGTGTGGAGGGACACGAGAAAATGGAAGTNACCCTTGCTCAGTCATCGG CAATACCACTCACCTTCAGCCTGGTCGAGGAGCTGTA CGGCTGCAGCGGCTCATGACGTCGGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OS0696A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    cncnATGACCTGCATTACATATCATGGGACAACCCTCCG AAGCAGCATCCGCACTACCTCACAATTGAAGACTTGGACAGGATGGTTGCTAGCGATGCACCATTTGCTCGGAAGTTTCATGCAGATGACCCGGTTCTAGACAAGATAGATGCGGAGATCCTGTTGCGTGGCCCAGACATGCTCACTCCTGGAGGATGGTGTGGAGGGACACGAGAAAATGGAAGTGACCCTTGCTCAGTCATCGG CAATACCACTCACCTTCAGCCTGGTCGAGGAGCTGTA CGGCTGCAGCGGCTCATGACGTCGCTCCTGTCAGAGGAGAAGTTTCACCCA AGGCAGTTCAAGTGAT GTGTTTCTGACTGAAGAAGGCT CTGTGGATGGAGAGTGCTCCTGGGTGATATATGGCTGTTCTGACCCATATTTCANCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C98099               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGGTTCTAGACAAGATAGATGCGGAGATCCTGTTGCGTGGCCCAGACATGCTCACTCCTGGAGGATGGTGTGGAGGGACACGAGAAAATGGAAGTGACCCTTGCTCAGTCATCGG CAATACCACTCACCTTCAGCCTGGTCGAGGAGCTGTA CGGCTGCAGCGGCTCATGACGTCGCTCCTGTCAGAGGAGAAGTTTCACCCA AGGCAGTGCAAGTGAT GTGTTTCTGACTGAAGAAGGCT CTGTGGATGGAGAGTGCTCCT GGTGATATATGGCTGTTCTGACCCATATTTCACCGTTTTGTCGGGCAGCTTCCTTTTTTTTTGAGG  TTTTTTTTTTGAGGGAGGCAGCTTCCA TTTTAACCTGTGCAATATAAGTTTTAGGAGCACGCCACTACATCGAT CA GTTTGTTGTATGCTGATATTGTGTCATCCCTTAGTACAAACACGAGATGAATGTATCATCCACGGTCTGAAGTGAAAATTGAATGGAAAATTAAAGTTGGTGA   AAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM038079             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         cCGTGCCCCAAACATGCTCACTCCTGGAGGATGGTTTGGAGGGACNCGAGAAAATGGAAGTGACCCTTGCTCAGTCATCGGCCAATACCACTCACCTTCAGCCTGGTCGAGGAGCTGTA CGGCTGCAGCGGCTCATGACGTCGCTCCTGTCAGAGGAGAAGTTTCACCCACAGGCAGTGCAAGTGAT GTGTTTCTGACTGAAGAAGGCT CTGTGGATGGAGAGTGCTCCT GGTGATATATGGCTGTTCTGACCCATATTTCACCGTTTTGTCGGGCAGCTTCCTTTTTTTTTGAGGTTTTTTTTTTTTGAGGGAGGCAGCTTCCACTTTTAACCTGTGCAATATAAGTTTTAGGAGCACGCCACTACATCGATCCACGTTTGTTGTATGCTGATATTGTGTCATCCCTTAGTACCAACNCGAGATGAATGTATCATCCCCGGTCTGAAGTGAAAATTGAATGGAAAATTAAAGTTGGTGA   TCCAAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C98164               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTACCGGCTGCANCGGCTCATGACGTCGCTCCTGTCAGAGGAGAANTTTCACCCA AGGCAGTGCAAGTGATGGTGTTTCTGACTGAAGAAGGCTCCTGTGGATGGAGAGTGCNCCT GGTGATATATGGCTGTTCTGACCCATATTTCACCGTTTTGTCGGGCAGCTTCCTTTTTTTTTGAGG  TTTTTTTTTTGAGGGAGGCAGCTTCCA TTTTAACCTGTGCAATATAAGTTTTAGGAGCACGCCACTACATCGAT CA GTTTGTTGTATGCTGATATTGTGTCATCCCTTAGTACAAACACGAGATGAATGTATCATCCACGGTCTGAAGTGAAAATTGAATGGAAAATTAAAGTTGGTGA   AAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA757652             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ggGTCCTTCCTGTCAGAGGAGAAGTTTCACCCA AGGCAGTGCAAGTGAT GTGTTTCTGACTGAAGAAGGCT CTGTGGATGGAGAGTGCTCCT GGTGATATATGGTTGTTCTGACCCATATTTCACCGTTTTGTCGGGCAGCTTCCTTTTTTTTTGAGGTTTTTTTTTTTTGAGGGAGGCAGCTTCCA TTTTAACCTGTGCAATATAAGTTTTAGGAGCACGCCACTACATCGAT CA GTTTGTTGTATGCTGATATTGTGTCATCCCTTAGTACAAACACGAGATGAATGTATCATCCACGGTCTGAAGTGAAAATTGAATGGAAAATTAAAGTTGGCGATCCAAAAAAAAAATAATAAAAACCAAAATAACAACATAAATAACGAGAGCTCTAGAACCCTCCTGATCTTCGCCGGTTGTCGGGTTGTTCGTGCCTTCGTCATATAAATGTTATGCTTTTGATCGTGTCGGGGGCCGGCTTCCGTTTTATAATATATTAAATAGTTAGTTATATCTTCTAAGTGCTGTCGTTCTCCACCGCGCCTCCGTTTTACTAGCCCATAATACCGGAATACGCCCCCTGGTCAACAGCAGATAGTATAGACGCCTGCGCTACGAGTGCTCGATAGCACCTAACGAGCCTCCTCCTTATTTTTTATTTGAATTAGTTTCATATCGTTCTCCAATTTGATAATTATGATAAGGTCATCATGTGATGGCTTTACGGTTGTGTTTCATGCCCTTTAATGAATCACAGTAGACCGTGANAGGTCGCTAATAATCTATAATTCTCGACAAATTGAGGCGTTTGTG]
[+] EMBL BE607402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCAGAGGAGAAGTTTCACCCA AGGCAGTGCAAGTGAT GTGTTTCTGACTGAAGAAGGCT CTGTGGATGGAGAGTGCTCCT GGTGATATATGGTTGTTCTGACCCATATTTCACCGTTTTGTCGGGCAGCTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_12934#0 TGAAGCCCACCACCGGCACCGCCGCCGCCGCCGCCGTCGATCGCCGCTGGCTTCTCCCCC TCGCCATCGGCTCCGCCCTCTCCCTCCTCCTCCTCGTCCTCCTCACCACCTTCCCCCTCC CCTTCCCCTTCCCCTCCTCCGCCGCCTCCCGCCCTCCCAACCCCACCCTCTTCGTCGAGC ACAAGCTCGCCCCCTCCCCGCCATCCACCGCTACCCCCCCTCGCTTCGCCTACCTCATCT CCGGCTCCGCGGGCGACGCCGCCGCGCTCCGCCGCGTCCTCCTCGCGCTCTACCACCCCA GGAACCTCTACATCCTCCACCTCGATGCCGAGGCGCCAGACTCCGACCGGGCCAACCTCG CCGCCGACCTCGCCGACCACCCTGTCATCGCCGCCGCCGCCAACGTCCACGTCATCCAAC GGGCCAACCTCGTCACCTACCGTGGCCCCACCATGGTCGCCAACACCCTCCACGCCGCCG CCGCCTTCCTCTACACCAACCAACACCCGCACTTGGAGTGGGACTGGTTCATCAACCTCT CCGCCTCCGACTACCCGCTCCTCACGCAGGATGATCTGATCCATGTGTTCTCCAAGCTGC CTCGCGGTCTCAACTTCATCGACCACACCAGCAACATTGGGTGGAAGGAGTATCAGAGGG CCAAGCCGGTCATCATTGACCCTGGCCTCTACATGAAGAAGAAGGCCGATGTCTTCTGGA TCCCGCAGCGCCGGAGTGTCCCCACTGCCTTCAAGCTCTTCACCGGGTCTGCTTGGATGG CCCTGTCTAAGCCGTTTGTCGAATACTGCATATGGGGCTGGGACAACCTTCCAAGGACTG TACTCATGTACTACGCCAATTTCATCTCTTCACCAGAAGGCTACTTCCACACTGTGGTCT GCAATGCTGAGGAGTTTAAAAATACCACGGTGAACCATGACCTGCATTACATATCATGGG ACAACCCTCCGAAGCAGCATCCGCACTACCTCACAATTGAAGACTTGGACAGGATGGTTG CTAGCGATGCACCATTTGCTCGGAAGTTTCATGCAGATGACCCGGTTCTAGACAAGATAG ATGCGGAGATCCTGTTGCGTGGCCCAGACATGCTCACTCCTGGAGGATGGTGTGGAGGGA CACGAGAAAATGGAAGTGACCCTTGCTCAGTCATCGGCAATACCACTCACCTTCAGCCTG GTCGAGGAGCTGTACGGCTGCAGCGGCTCATGACGTCGCTCCTGTCAGAGGAGAAGTTTC ACCCAAGGCAGTGCAAGTGATGTGTTTCTGACTGAAGAAGGCTCTGTGGATGGAGAGTGC TCCTGGTGATATATGGCTGTTCTGACCCATATTTCACCGTTTTGTCGGGCAGCTTCCTTT TTTTTTGAGGTTTTTTTTTTGAGGGAGGCAGCTTCCATTTTAACCTGTGCAATATAAGTT TTAGGAGCACGCCACTACATCGATCAGTTTGTTGTATGCTGATATTGTGTCATCCCTTAG TACAAACACGAGATGAATGTATCATCCACGGTCTGAAGTGAAAATTGAATGGAAAATTAA AGTTGGTGAAAAAAAAAAAAAAAAAAAAAAGAAATAACAACATAAATAACGAGAGCTCTA GAACCCTCCTGATCTTCGCCGGTTGTCGGGTTGTTCGTGCCTTCGTCATATAAATGTTAT GCTTTTGATCGTGTCGGGGGCCGGCTTCCGTTTTATAATATATTAAATAGTTAGTTATAT CTTCTAAGTGCTGTCGTTCTCCACCGCGCCTCCGTTTTACTAGCCCATAATACCGGAATA CGCCCCCTGGTCAACAGCAGATAGTATAGACGCCTGCGCTACGAGTGCTCGATAGCACCT AACGAGCCTCCTCCTTATTTTTTATTTGAATTAGTTTCATATCGTTCTCCAATTTGATAA TTATGATAAGGTCATCATGTGATGGCTTTACGGTTGTGTTTCATGCCCTTTAATGAATCA CAGTAGACCGTGANAGGTCGCTAATAATCTATAATTCTCGACAAATTGAGGCGTTTGTG



consensusID : consensus_12934#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 775
fasta sequence
                              [CACCACCACCTTTTCCTCCTCCTCCTCGCGCGGCCGCACCCGATCCCAATCCACGCCTCGCCTCGCCGCGATCCACGCCGCCGGTGGTGGCGGTGGAAGGAAGGAAGGAAGGATGCTGGAGACGAAGCCGCCGTCTCCGGGGACGGCGGGGGCGGCGGGGGTGGCAGGGGGTGGGTACCATCGGAGGTGGGCGGCGCCGCTGCTGGCGTCCGTGCTGCTCTCGTCGCTCCTCATCGCGGCGTCCCTCTTCTTCTCTTCGTCGCGGGCGCTCCTCCTCTCCTTCTCCCCGCTCCCCTCCGCGGCATCCGCCGAGCCGCTCTTCGTCGAGGCCAAGCTGCGCCAGCAGCAGCATATGCGCGGCGCGGCGGCGTCGGGCGGGCGCGGCCGCGGCGCCGTGCCGAGGATCGCCTACCTCGTGTCCGGCTCCGCCGGCGACGGCGCCGCGCTGCGCCGCACGCTCAGGGCGCTCTACCACCCGTCGAACATGTACGTCGTCCACCTCGACCTCGAGGCCCCCGCCACCGAGCGCGCCGAGCTCGCCGCCGCGGTGCGCGCCGACCCGGTCTACTCGCGGTTCCGCAACGTCCAGGTGGTCACCCGCGCCAACCTCGTCACCTACCGGGGCCCGACCATGGTGGCCAACACTCTCCACGCCGCCGCCATCCTCCTCCGCGAGGGCGGCGAGTGGGACTGGTTCATCAACCTCTCCGCCTCCGACTACCCCCTCGTCACGCAGGAAGATCTGTTGTATGTTCTATCTGACTTGCCCAGGCAA]

[+] EMBL CB673093             [CACCACCACCTTTTCCTCCTCCTCCTCGCGCGGCCGCACCCGATCCCAATCCACGCCTCGCCTCGCCGCGATCCACGCCGCCGGTGGTGGCGGTGGAAGGAAGGAAGGAAGGATGCTGGAGACGAAGCCGCCGTCTCCGGGGACGGCGGGGGCGGCGGGGGTGGCAGGGGGTGGGTACCATCGGAGGTGGGCGGCGCCGCTGCTGGCGTCCGTGCTGCTCTCGTCGCTCCTCATCGCGGCGTCCCTCTTCTTCTCTTCGTCGCGGGCGCTCCTCCTCTCCTTCTCCCCGCTCCCCTCCGCGGCATCCGCCGAGCCGCTCTTCGTCGAGGCCAAGCTGCGCCAGCAGCAGCATATGCGCGGCGCGGCGGCGTCGGGCGGGCGCGGCCGCGGCGCCGTGCCGAGGATCGCCTACCTCGTGTCCGGCTCCGCCGGCGACGGCGCCGCGCTGCGCCGCACGCTCAGGGCGCTCTACCACCCGTCGAACATGTACGTCGTCCACCTCGACCTCGAGGCCCCCGCCACCGAGCGCGCCGAGCTCGCCGCCGCGGTGCGCGCCGACCCGGTCTACTCGCGGTTCCGCAACGTCCAGGTGGTCACCCGCGCCAACCTCGTCACCTACCGGGGCCCGACCATGGTGGCCAACACTCTCCACGCCGCCGCCATCCTCCTCCGCGAGGGCGGCGAGTGGGACTGGTTCATCAACCTCTCCGCCTCCGACTACCCCCTCGTCACGCAGGAAGATCTGTTGTATGTTCTATCTGACTTGCCCAGGCAA]
[+] EMBL CB636027             [                           GCGCGGCCGCACCCGATCCCAATCCACGCCTCGCCTCGCCGCGATCCACGCCGCCGGTGGTGGCGGTGGAAGGAAGGAAGGAAGGATGCTGGAGACGAAGCCGCCGTCGCCGGGGACGGCGGGGGCGGCGGGGGTGGCAGGGGGTGGGTACCATCGGAGGTGGGCGGCGCCGCTGCTGGCGTCCGTGCTGCTCTCGTCGCTCCTCATCGCGGCGTCCCTCTTCTTCTCTTCGTCGCGGGCGCTCCTCCTCTCCTTCTCCCCGCTCCCCTCCGCGGCATCCGCCGAGCCGCTCTTCGTCGAGGCCAAGCTGCGCCAGCAGCANCAGATGCGCGG                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_12934#1 CACCACCACCTTTTCCTCCTCCTCCTCGCGCGGCCGCACCCGATCCCAATCCACGCCTCG CCTCGCCGCGATCCACGCCGCCGGTGGTGGCGGTGGAAGGAAGGAAGGAAGGATGCTGGA GACGAAGCCGCCGTCTCCGGGGACGGCGGGGGCGGCGGGGGTGGCAGGGGGTGGGTACCA TCGGAGGTGGGCGGCGCCGCTGCTGGCGTCCGTGCTGCTCTCGTCGCTCCTCATCGCGGC GTCCCTCTTCTTCTCTTCGTCGCGGGCGCTCCTCCTCTCCTTCTCCCCGCTCCCCTCCGC GGCATCCGCCGAGCCGCTCTTCGTCGAGGCCAAGCTGCGCCAGCAGCAGCATATGCGCGG CGCGGCGGCGTCGGGCGGGCGCGGCCGCGGCGCCGTGCCGAGGATCGCCTACCTCGTGTC CGGCTCCGCCGGCGACGGCGCCGCGCTGCGCCGCACGCTCAGGGCGCTCTACCACCCGTC GAACATGTACGTCGTCCACCTCGACCTCGAGGCCCCCGCCACCGAGCGCGCCGAGCTCGC CGCCGCGGTGCGCGCCGACCCGGTCTACTCGCGGTTCCGCAACGTCCAGGTGGTCACCCG CGCCAACCTCGTCACCTACCGGGGCCCGACCATGGTGGCCAACACTCTCCACGCCGCCGC CATCCTCCTCCGCGAGGGCGGCGAGTGGGACTGGTTCATCAACCTCTCCGCCTCCGACTA CCCCCTCGTCACGCAGGAAGATCTGTTGTATGTTCTATCTGACTTGCCCAGGCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12934#0      ------------------------------------------------------------
consensus_12934#1      CACCACCACCTTTTCCTCCTCCTCCTCGCGCGGCCGCACCCGATCCCAATCCACGCCTCG 60
                                                                                   

consensus_12934#0      ------------------------------------------------------------
consensus_12934#1      CCTCGCCGCGATCCACGCCGCCGGTGGTGGCGGTGGAAGGAAGGAAGGAAGGATGCTGGA 120
                                                                                   

consensus_12934#0      ------------------------------------------------TGAAGCCCACCA 12
consensus_12934#1      GACGAAGCCGCCGTCTCCGGGGACGGCGGGGGCGGCGGGGGTGGCAGGGGGTGGGTACCA 180
                                                                        *  *   ****

consensus_12934#0      CCGGCACCGC-CGCCGCCGCCGCCGTCGATCGCCGCTGGCTTCTCCCCCTCGCCATCGGC 71
consensus_12934#1      TCGGAGGTGGGCGGCGCCGCTGCTGGCGTCCGT-GCTG-CTCTCGTCGCTCCTCATCG-C 237
                        ***    *  ** ****** ** * **  **  **** **     * ***  ***** *

consensus_12934#0      TCCGCCCTCTCCCTCCTCCTCCTCGTCCTCCTCACCACCTTCCCCCTCCCC-TTCCCCTT 130
consensus_12934#1      GGCGTCCCTCTTCTTCTCTTCGTCGCGGGCGCTCCTCCTCTCCTTCTCCCCGCTCCCCTC 297
                         ** **     ** *** ** ***    *    *  *  ***  ******  ****** 

consensus_12934#0      CCCCTCCTCCGCCGCCTCCCGCCCTCCCAACCCCACCCT-CTTCGTCG--AGCACAAGCT 187
consensus_12934#1      CGCGGCATCCGCCGAGCCGCTCTTCGTCGAGGCCAAGCTGCGCCAGCAGCAGCATATGCG 357
                       * *  * *******   * * *     * *  ***  ** *  *  *   **** * ** 

consensus_12934#0      CGCCCCCTCCCCGCCATCCA----CCGCTACCCCCCCTCGCT-----TCGCCTACCTCAT 238
consensus_12934#1      CGGCGCGGCGGCGTCGGGCGGGCGCGGCCGCGGCGCCGTGCCGAGGATCGCCTACCTCGT 417
                       ** * *  *  ** *   *     * **  *  * **  **      *********** *

consensus_12934#0      CTCCGGCTCCGCGGGCGACGCCGCCGCGCTCCGCCGCGTCCTCCTCGCGCTCTACCACCC 298
consensus_12934#1      GTCCGGCTCCGCCGGCGACGGCGCCGCGCTGCGCCGCACGCTCAGGGCGCTCTACCACCC 477
                        *********** ******* ********* ******   ***   **************

consensus_12934#0      CAGGAACCTCTACATCCTCCACCTCGATGCCGAGGCGCCAGACTCCGACCGGGCCAACCT 358
consensus_12934#1      GTCGAACATGTACGTCGTCCACCTCGACCTCGAGGCCCCCGCCACCGAGCGCGCCGAGCT 537
                          **** * *** ** **********   ****** ** * * **** ** *** * **

consensus_12934#0      CGCCGCCGACCTCGCCGACCACCCTGTCATCGCCGCCGCCGC-CAACGTCCACGTCATCC 417
consensus_12934#1      CGCCGCCGCGGTGCGCGCCGACCCGGTCTAC-TCGCGGTTCCGCAACGTCCAGGTGGTCA 596
                       ********   *   ** * **** ***  *  *** *   * ********* **  ** 

consensus_12934#0      AACGGGCCAACCTCGTCACCTACCGTGGCCCCACCATGGTCGCCAACACCCTCCACGCCG 477
consensus_12934#1      CCCGCGCCAACCTCGTCACCTACCGGGGCCCGACCATGGTGGCCAACACTCTCCACGCCG 656
                         ** ******************** ***** ******** ******** **********

consensus_12934#0      CCGCCGCCTTCCTCTACACCAACCAACACCCGCACTTGGAGTGGGACTGGTTCATCAACC 537
consensus_12934#1      CCGCCATCCTCCTCCGC-------GAGGGCGGC-----GAGTGGGACTGGTTCATCAACC 704
                       *****  * *****  *        *   * **     **********************

consensus_12934#0      TCTCCGCCTCCGACTACCCGCTCCTCACGCAGGATGATCTGATCCATGTGTTCTCCAAGC 597
consensus_12934#1      TCTCCGCCTCCGACTACCCCCTCGTCACGCAGGAAGATCTGTTGTATGTTCTATCTGACT 764
                       ******************* *** ********** ****** *  ****  * **  *  

consensus_12934#0      TGCCTCGCGGTCTCAACTTCATCGACCACACCAGCAACATTGGGTGGAAGGAGTATCAGA 657
consensus_12934#1      TGCCCAGGCAA------------------------------------------------- 775
                       ****  *                                                     

consensus_12934#0      GGGCCAAGCCGGTCATCATTGACCCTGGCCTCTACATGAAGAAGAAGGCCGATGTCTTCT 717
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      GGATCCCGCAGCGCCGGAGTGTCCCCACTGCCTTCAAGCTCTTCACCGGGTCTGCTTGGA 777
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TGGCCCTGTCTAAGCCGTTTGTCGAATACTGCATATGGGGCTGGGACAACCTTCCAAGGA 837
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      CTGTACTCATGTACTACGCCAATTTCATCTCTTCACCAGAAGGCTACTTCCACACTGTGG 897
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TCTGCAATGCTGAGGAGTTTAAAAATACCACGGTGAACCATGACCTGCATTACATATCAT 957
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      GGGACAACCCTCCGAAGCAGCATCCGCACTACCTCACAATTGAAGACTTGGACAGGATGG 1017
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TTGCTAGCGATGCACCATTTGCTCGGAAGTTTCATGCAGATGACCCGGTTCTAGACAAGA 1077
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TAGATGCGGAGATCCTGTTGCGTGGCCCAGACATGCTCACTCCTGGAGGATGGTGTGGAG 1137
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      GGACACGAGAAAATGGAAGTGACCCTTGCTCAGTCATCGGCAATACCACTCACCTTCAGC 1197
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      CTGGTCGAGGAGCTGTACGGCTGCAGCGGCTCATGACGTCGCTCCTGTCAGAGGAGAAGT 1257
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TTCACCCAAGGCAGTGCAAGTGATGTGTTTCTGACTGAAGAAGGCTCTGTGGATGGAGAG 1317
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TGCTCCTGGTGATATATGGCTGTTCTGACCCATATTTCACCGTTTTGTCGGGCAGCTTCC 1377
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TTTTTTTTTGAGGTTTTTTTTTTGAGGGAGGCAGCTTCCATTTTAACCTGTGCAATATAA 1437
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      GTTTTAGGAGCACGCCACTACATCGATCAGTTTGTTGTATGCTGATATTGTGTCATCCCT 1497
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TAGTACAAACACGAGATGAATGTATCATCCACGGTCTGAAGTGAAAATTGAATGGAAAAT 1557
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TAAAGTTGGTGAAAAAAAAAAAAAAAAAAAAAAGAAATAACAACATAAATAACGAGAGCT 1617
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      CTAGAACCCTCCTGATCTTCGCCGGTTGTCGGGTTGTTCGTGCCTTCGTCATATAAATGT 1677
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TATGCTTTTGATCGTGTCGGGGGCCGGCTTCCGTTTTATAATATATTAAATAGTTAGTTA 1737
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TATCTTCTAAGTGCTGTCGTTCTCCACCGCGCCTCCGTTTTACTAGCCCATAATACCGGA 1797
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      ATACGCCCCCTGGTCAACAGCAGATAGTATAGACGCCTGCGCTACGAGTGCTCGATAGCA 1857
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      CCTAACGAGCCTCCTCCTTATTTTTTATTTGAATTAGTTTCATATCGTTCTCCAATTTGA 1917
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TAATTATGATAAGGTCATCATGTGATGGCTTTACGGTTGTGTTTCATGCCCTTTAATGAA 1977
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TCACAGTAGACCGTGANAGGTCGCTAATAATCTATAATTCTCGACAAATTGAGGCGTTTG 2037
consensus_12934#1      ------------------------------------------------------------
                                                                                   

consensus_12934#0      TG 2039
consensus_12934#1      --
                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)